TY - JOUR A1 - Büchner, Dörthe A1 - John, Leonard A1 - Mertens, Monique A1 - Wessig, Pablo T1 - Detection of dsDNA with [1,3]Dioxolo[4,5-f]benzodioxol (DBD) Dyes JF - Chemistry - a European journal N2 - DBD fluorescent dyes have proven to be useful in numerous applications. To widen the range of biological applications, we propose three different types of DBD molecules that have been modified in such a way that DNA interaction becomes probable. After the successful synthesis of all three compounds, we tested their fluorescent properties and their DNA binding abilities. Two of the three probes exhibit an interaction with dsDNA with subsequent fluorescence enhancement. The determined binding constants of the two new DNA dyes are comparable to other minorgroove-binding dyes. Their large Stokes shifts and their long fluorescent lifetimes are outstanding features of these dyes. KW - DNA recognition KW - dyes/pigments KW - fluorescent probes KW - heterocycles KW - scatchard plot Y1 - 2018 U6 - https://doi.org/10.1002/chem.201804057 SN - 0947-6539 SN - 1521-3765 VL - 24 IS - 60 SP - 16183 EP - 16190 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Schmidt, Bernd A1 - Hauke, Sylvia A1 - Muehlenberg, Nino T1 - Imino glycals via Ruthenium-catalyzed RCM and isomerization JF - Synthesis N2 - N-Allyl-N-homoallylamines were converted in one step into cyclic enamides via a ruthenium-catalyzed assisted tandem catalytic ring-closing metathesis-isomerization sequence. The sequence relies on the in situ transformation of a metathesis active Ru-carbene into an isomerization active Ru-hydride by addition of hydroxide as a chemical trigger. KW - heterocycles KW - isomerization KW - metathesis KW - ruthenium KW - tandem reaction Y1 - 2014 U6 - https://doi.org/10.1055/s-0033-1338615 SN - 0039-7881 SN - 1437-210X VL - 46 IS - 12 SP - 1648 EP - 1658 PB - Thieme CY - Stuttgart ER - TY - JOUR A1 - Schultze, Christiane A1 - Schmidt, Bernd T1 - Ring-closing-metathesis-based synthesis of annellated coumarins from 8-allylcoumarins JF - Beilstein journal of organic chemistry N2 - 8-Allylcoumarins are conveniently accessible through a microwave-promoted tandem Claisen rearrangement/Wittig olefination/cyclization sequence. They serve as a versatile platform for the annellation of five- to seven-membered rings using ring-closing olefin metathesis (RCM). Furano-, pyrano-, oxepino- and azepinocoumarins were synthesized from the same set of precursors using Ru-catalyzed double bond isomerizations and RCM in a defined order. One class of products, pyrano[2,3-f]chromene-2,8-diones, were inaccessible through direct RCM of an acrylate, but became available from the analogous allyl ether via an assisted tandem catalytic RCM/allylic oxidation sequence. KW - coumarins KW - heterocycles KW - isomerization KW - olefin metathesis KW - ruthenium Y1 - 2018 U6 - https://doi.org/10.3762/bjoc.14.278 SN - 1860-5397 VL - 14 SP - 2991 EP - 2998 PB - Beilstein-Institut zur Förderung der Chemischen Wissenschaften CY - Frankfurt, Main ER - TY - JOUR A1 - Wessig, Pablo A1 - Freyse, Daniel A1 - Schuster, David A1 - Kelling, Alexandra T1 - Fluorescent dyes with large stokes shifts based on Benzo[1,2-d:4,5-d']bis([1,3]dithiole) (“S4-DBD Dyes”) JF - Europan journal of organic chemistry N2 - We report on a further development of [1,3]-dioxolo[4.5-f]benzodioxole (DBD) fluorescent dyes by replacement of the four oxygen atoms of the heterocyclic core by sulfur atoms. This variation causes striking changes of the photophysical properties. Whereas absorption and emission significantly shifted to longer wavelength, the fluorescence lifetimes and quantum yields are diminished compared to DBD dyes. The latter effect is presumably caused by an enhanced intersystem crossing to the triplet state due to the sulfur atoms. The very large Stokes shifts of the S-4-DBD dyes ranging from 3000 cm(-1) to 7400 cm(-1) (67 nm to 191 nm) should be especially emphasized. By analogy with DBD dyes a broad variation of absorption and emission wavelength is possible by introducing different electron withdrawing substituents. Moreover, some derivatives for coupling with biomolecules were developed. KW - fluorescent dyes KW - sulfur KW - heterocycles KW - stokes shift KW - photophysics Y1 - 2020 U6 - https://doi.org/10.1002/ejoc.202000093 SN - 1434-193X SN - 1099-0690 VL - 2020 IS - 11 SP - 1732 EP - 1744 PB - Wiley CY - Weinheim ER - TY - JOUR A1 - Wessig, Pablo A1 - John, Leonard A1 - Sperlich, Eric A1 - Kelling, Alexandra T1 - Sulfur tuning of [1,3]-dioxolo[4.5-f]benzodioxole (DBD) fluorescent dyes JF - European journal of organic chemistry N2 - The replacement of oxygen by sulfur atoms of [1,3]-dioxolo[4.5-f]benzodioxole (DBD) fluorescent dyes is an efficient way to adjust the photophysical properties (sulfur tuning). While previously developed S-4-DBD dyes exhibit considerably red-shifted absorption and emission wavelength, the heavy atom effect of four sulfur atoms cause low fluorescence quantum yields and short fluorescence lifetimes. Herein, we demonstrate that the replacement of less than four sulfur atoms (S-1-DBD, 1,2-S-2-DBD, and 1,4-S-2-DBD dyes) permits a fine-tuning of the photophysical properties. In some cases, a similar influence on the wavelength without the detrimental effect on the quantum yields and lifetimes is observed. Furthermore, the synthetic accessibility of S-1- and S-2-DBD dyes is improved, compared with S-4-DBD dyes. For coupling with biomolecules a series of reactive derivatives of the new dyes were developed (azides, OSu esters, alkynes, maleimides). KW - fluorescent dyes KW - heterocycles KW - photophysics KW - stokes shift KW - sulfur Y1 - 2020 U6 - https://doi.org/10.1002/ejoc.202001418 SN - 1434-193X SN - 1099-0690 VL - 2021 IS - 3 SP - 499 EP - 511 PB - Wiley-VCH CY - Weinheim ER -