TY - THES A1 - Schneider, Jan Niklas T1 - Computational approaches for emotion research T1 - Computergestützte Methoden für die Emotionsforschung N2 - Emotionen sind ein zentrales Element menschlichen Erlebens und spielen eine wichtige Rolle bei der Entscheidungsfindung. Diese Dissertation identifiziert drei methodische Probleme der aktuellen Emotionsforschung und zeigt auf, wie diese mittels computergestützter Methoden gelöst werden können. Dieser Ansatz wird in drei Forschungsprojekten demonstriert, die die Entwicklung solcher Methoden sowie deren Anwendung auf konkrete Forschungsfragen beschreiben. Das erste Projekt beschreibt ein Paradigma welches es ermöglicht, die subjektive und objektive Schwierigkeit der Emotionswahrnehmung zu messen. Darüber hinaus ermöglicht es die Verwendung einer beliebigen Anzahl von Emotionskategorien im Vergleich zu den üblichen sechs Kategorien der Basisemotionen. Die Ergebnisse deuten auf eine Zunahme der Schwierigkeiten bei der Wahrnehmung von Emotionen mit zunehmendem Alter der Darsteller hin und liefern Hinweise darauf, dass junge Erwachsene, ältere Menschen und Männer ihre Schwierigkeit bei der Wahrnehmung von Emotionen unterschätzen. Weitere Analysen zeigten eine geringe Relevanz personenbezogener Variablen und deuteten darauf hin, dass die Schwierigkeit der Emotionswahrnehmung vornehmlich durch die Ausprägung der Wertigkeit des Ausdrucks bestimmt wird. Das zweite Projekt zeigt am Beispiel von Arousal, einem etablierten, aber vagen Konstrukt der Emotionsforschung, wie Face-Tracking-Daten dazu genutzt werden können solche Konstrukte zu schärfen. Es beschreibt, wie aus Face-Tracking-Daten Maße für die Entfernung, Geschwindigkeit und Beschleunigung von Gesichtsausdrücken berechnet werden können. Das Projekt untersuchte wie diesen Maße mit der Arousal-Wahrnehmung in Menschen mit und ohne Autismus zusammenhängen. Der Abstand zum Neutralgesicht war prädiktiv für die Arousal-Bewertungen in beiden Gruppen. Die Ergebnisse deuten auf eine qualitativ ähnliche Wahrnehmung von Arousal für Menschen mit und ohne Autismus hin. Im dritten Projekt stellen wir die Partial-Least-Squares-Analyse als allgemeine Methode vor, um eine optimale Repräsentation zur Verknüpfung zweier hochdimensionale Datensätze zu finden. Das Projekt demonstriert die Anwendbarkeit dieser Methode in der Emotionsforschung anhand der Frage nach Unterschieden in der Emotionswahrnehmung zwischen Männern und Frauen. Wir konnten zeigen, dass die emotionale Wahrnehmung von Frauen systematisch mehr Varianz der Gesichtsausdrücke erfasst und dass signifikante Unterschiede in der Art und Weise bestehen, wie Frauen und Männer einige Gesichtsausdrücke wahrnehmen. Diese konnten wir als dynamische Gesichtsausdrücke visualisieren. Um die Anwendung der entwickelten Methode für die Forschungsgemeinschaft zu erleichtern, wurde ein Software-Paket für die Statistikumgebung R geschrieben. Zudem wurde eine Website entwickelt (thisemotiondoesnotexist.com), die es Besuchern erlaubt, ein Partial-Least-Squares-Modell von Emotionsbewertungen und Face-Tracking-Daten interaktiv zu erkunden, um die entwickelte Methode zu verbreiten und ihren Nutzen für die Emotionsforschung zu illustrieren. N2 - Emotions are a central element of human experience. They occur with high frequency in everyday life and play an important role in decision making. However, currently there is no consensus among researchers on what constitutes an emotion and on how emotions should be investigated. This dissertation identifies three problems of current emotion research: the problem of ground truth, the problem of incomplete constructs and the problem of optimal representation. I argue for a focus on the detailed measurement of emotion manifestations with computer-aided methods to solve these problems. This approach is demonstrated in three research projects, which describe the development of methods specific to these problems as well as their application to concrete research questions. The problem of ground truth describes the practice to presuppose a certain structure of emotions as the a priori ground truth. This determines the range of emotion descriptions and sets a standard for the correct assignment of these descriptions. The first project illustrates how this problem can be circumvented with a multidimensional emotion perception paradigm which stands in contrast to the emotion recognition paradigm typically employed in emotion research. This paradigm allows to calculate an objective difficulty measure and to collect subjective difficulty ratings for the perception of emotional stimuli. Moreover, it enables the use of an arbitrary number of emotion stimuli categories as compared to the commonly used six basic emotion categories. Accordingly, we collected data from 441 participants using dynamic facial expression stimuli from 40 emotion categories. Our findings suggest an increase in emotion perception difficulty with increasing actor age and provide evidence to suggest that young adults, the elderly and men underestimate their emotion perception difficulty. While these effects were predicted from the literature, we also found unexpected and novel results. In particular, the increased difficulty on the objective difficulty measure for female actors and observers stood in contrast to reported findings. Exploratory analyses revealed low relevance of person-specific variables for the prediction of emotion perception difficulty, but highlighted the importance of a general pleasure dimension for the ease of emotion perception. The second project targets the problem of incomplete constructs which relates to vaguely defined psychological constructs on emotion with insufficient ties to tangible manifestations. The project exemplifies how a modern data collection method such as face tracking data can be used to sharpen these constructs on the example of arousal, a long-standing but fuzzy construct in emotion research. It describes how measures of distance, speed and magnitude of acceleration can be computed from face tracking data and investigates their intercorrelations. We find moderate to strong correlations among all measures of static information on one hand and all measures of dynamic information on the other. The project then investigates how self-rated arousal is tied to these measures in 401 neurotypical individuals and 19 individuals with autism. Distance to the neutral face was predictive of arousal ratings in both groups. Lower mean arousal ratings were found for the autistic group, but no difference in correlation of the measures and arousal ratings could be found between groups. Results were replicated in a high autistic traits group consisting of 41 participants. The findings suggest a qualitatively similar perception of arousal for individuals with and without autism. No correlations between valence ratings and any of the measures could be found which emphasizes the specificity of our tested measures for the construct of arousal. The problem of optimal representation refers to the search for the best representation of emotions and the assumption that there is a one-fits-all solution. In the third project we introduce partial least squares analysis as a general method to find an optimal representation to relate two high-dimensional data sets to each other. The project demonstrates its applicability to emotion research on the question of emotion perception differences between men and women. The method was used with emotion rating data from 441 participants and face tracking data computed on 306 videos. We found quantitative as well as qualitative differences in the perception of emotional facial expressions between these groups. We showed that women’s emotional perception systematically captured more of the variance in facial expressions. Additionally, we could show that significant differences exist in the way that women and men perceive some facial expressions which could be visualized as concrete facial expression sequences. These expressions suggest differing perceptions of masked and ambiguous facial expressions between the sexes. In order to facilitate use of the developed method by the research community, a package for the statistical environment R was written. Furthermore, to call attention to the method and its usefulness for emotion research, a website was designed that allows users to explore a model of emotion ratings and facial expression data in an interactive fashion. KW - facial expression KW - emotion KW - perception KW - face tracking KW - perception differences KW - emotion representation KW - Gesichtsausdruck KW - Emotionen KW - Wahrnehmung KW - Wahrnehmungsunterschiede KW - computational methods KW - emotion research KW - computergestützte Methoden KW - Emotionsforschung KW - arousal perception KW - objective difficulty KW - Wahrnehmung von Arousal KW - Objektive Schwierigkeit Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-459275 ER - TY - GEN A1 - Fichte, Johannes Klaus A1 - Hecher, Markus A1 - Meier, Arne T1 - Counting Complexity for Reasoning in Abstract Argumentation T2 - The Thirty-Third AAAI Conference on Artificial Intelligence, the Thirty-First Innovative Applications of Artificial Intelligence Conference, the Ninth AAAI Symposium on Educational Advances in Artificial Intelligence N2 - In this paper, we consider counting and projected model counting of extensions in abstract argumentation for various semantics. When asking for projected counts we are interested in counting the number of extensions of a given argumentation framework while multiple extensions that are identical when restricted to the projected arguments count as only one projected extension. We establish classical complexity results and parameterized complexity results when the problems are parameterized by treewidth of the undirected argumentation graph. To obtain upper bounds for counting projected extensions, we introduce novel algorithms that exploit small treewidth of the undirected argumentation graph of the input instance by dynamic programming (DP). Our algorithms run in time double or triple exponential in the treewidth depending on the considered semantics. Finally, we take the exponential time hypothesis (ETH) into account and establish lower bounds of bounded treewidth algorithms for counting extensions and projected extension. Y1 - 2019 SN - 978-1-57735-809-1 SP - 2827 EP - 2834 PB - AAAI Press CY - Palo Alto ER - TY - GEN A1 - Alhosseini Almodarresi Yasin, Seyed Ali A1 - Bin Tareaf, Raad A1 - Najafi, Pejman A1 - Meinel, Christoph T1 - Detect me if you can BT - Spam Bot Detection Using Inductive Representation Learning T2 - Companion Proceedings of The 2019 World Wide Web Conference N2 - Spam Bots have become a threat to online social networks with their malicious behavior, posting misinformation messages and influencing online platforms to fulfill their motives. As spam bots have become more advanced over time, creating algorithms to identify bots remains an open challenge. Learning low-dimensional embeddings for nodes in graph structured data has proven to be useful in various domains. In this paper, we propose a model based on graph convolutional neural networks (GCNN) for spam bot detection. Our hypothesis is that to better detect spam bots, in addition to defining a features set, the social graph must also be taken into consideration. GCNNs are able to leverage both the features of a node and aggregate the features of a node’s neighborhood. We compare our approach, with two methods that work solely on a features set and on the structure of the graph. To our knowledge, this work is the first attempt of using graph convolutional neural networks in spam bot detection. KW - Social Media Analysis KW - Bot Detection KW - Graph Embedding KW - Graph Convolutional Neural Networks Y1 - 2019 SN - 978-1-4503-6675-5 U6 - https://doi.org/10.1145/3308560.3316504 SP - 148 EP - 153 PB - Association for Computing Machinery CY - New York ER - TY - THES A1 - Böhne, Sebastian T1 - Different degrees of formality T1 - Verschiedene Formalitätsgrade BT - an introduction to the concept and a demonstration of its usefulness BT - Vorstellung des Konzepts und Nachweis seiner Nützlichkeit N2 - In this thesis we introduce the concept of the degree of formality. It is directed against a dualistic point of view, which only distinguishes between formal and informal proofs. This dualistic attitude does not respect the differences between the argumentations classified as informal and it is unproductive because the individual potential of the respective argumentation styles cannot be appreciated and remains untapped. This thesis has two parts. In the first of them we analyse the concept of the degree of formality (including a discussion about the respective benefits for each degree) while in the second we demonstrate its usefulness in three case studies. In the first case study we will repair Haskell B. Curry's view of mathematics, which incidentally is of great importance in the first part of this thesis, in light of the different degrees of formality. In the second case study we delineate how awareness of the different degrees of formality can be used to help students to learn how to prove. Third, we will show how the advantages of proofs of different degrees of formality can be combined by the development of so called tactics having a medium degree of formality. Together the three case studies show that the degrees of formality provide a convincing solution to the problem of untapped potential. N2 - In dieser Dissertation stellen wir das Konzept der Formalitätsgrade vor, welches sich gegen eine dualistische Sichtweise richtet, die nur zwischen formalen und informalen Beweisen unterscheidet. Letztere Sichtweise spiegelt nämlich die Unterschiede zwischen den als informal klassifizierten Argumentationen nicht wieder und ist außerdem unproduktiv, weil sie nicht in der Lage ist, das individuelle Potential der jeweiligen Argumentationsstile wertzuschätzen und auszuschöpfen. Die Dissertation hat zwei Teile. Im ersten analysieren wir das Konzept der Formalitätsgrade (eine Diskussion über die Vorteile der jeweiligen Grade eingeschlossen), während wir im zweiten Teil die Nützlichkeit der Formalitätsgrade anhand von drei Fallbeispielen nachweisen. Im ersten von diesen werden wir Haskell B. Currys Sichtweise zur Mathematik, die nebenbei bemerkt von größter Wichtigkeit für den ersten Teil der Dissertation ist, mithilfe der verschiedenen Formalitätsgrade reparieren. Im zweiten Fallbeispiel zeigen wir auf, wie die Beachtung der verschiedenen Formalitätsgrade den Studenten dabei helfen kann, das Beweisen zu erlernen. Im letzten Fallbeispiel werden wir dann zeigen, wie die Vorteile von Beweisen verschiedener Formalitätsgrade durch die Anwendung sogenannter Taktiken mittleren Formalitätsgrades kombiniert werden können. Zusammen zeigen die drei Fallbeispiele, dass die Formalitätsgrade eine überzeugende Lösung für das Problem des ungenutzten Potentials darstellen. KW - argumentation KW - Coq KW - Curry KW - degree of formality KW - formalism KW - logic KW - mathematics education KW - philosophy of mathematics KW - proof KW - proof assistant KW - proof environment KW - tactic KW - Argumentation KW - Beweis KW - Beweisassistent KW - Beweisumgebung KW - Coq KW - Curry KW - Formalismus KW - Formalitätsgrad KW - Logik KW - Mathematikdidaktik KW - Mathematikphilosophie KW - Taktik Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-423795 N1 - CCS -> Applied computing -> Education -> Interactive learning environments CCS -> Theory of computation -> Logic CCS -> Computing methodologies -> Symbolic and algebraic manipulation -> Symbolic and algebraic algorithms -> Theorem proving algorithms ER - TY - THES A1 - Tiwari, Abhishek T1 - Enhancing Users’ Privacy: Static Resolution of the Dynamic Properties of Android N2 - The usage of mobile devices is rapidly growing with Android being the most prevalent mobile operating system. Thanks to the vast variety of mobile applications, users are preferring smartphones over desktops for day to day tasks like Internet surfing. Consequently, smartphones store a plenitude of sensitive data. This data together with the high values of smartphones make them an attractive target for device/data theft (thieves/malicious applications). Unfortunately, state-of-the-art anti-theft solutions do not work if they do not have an active network connection, e.g., if the SIM card was removed from the device. In the majority of these cases, device owners permanently lose their smartphone together with their personal data, which is even worse. Apart from that malevolent applications perform malicious activities to steal sensitive information from smartphones. Recent research considered static program analysis to detect dangerous data leaks. These analyses work well for data leaks due to inter-component communication, but suffer from shortcomings for inter-app communication with respect to precision, soundness, and scalability. This thesis focuses on enhancing users' privacy on Android against physical device loss/theft and (un)intentional data leaks. It presents three novel frameworks: (1) ThiefTrap, an anti-theft framework for Android, (2) IIFA, a modular inter-app intent information flow analysis of Android applications, and (3) PIAnalyzer, a precise approach for PendingIntent vulnerability analysis. ThiefTrap is based on a novel concept of an anti-theft honeypot account that protects the owner's data while preventing a thief from resetting the device. We implemented the proposed scheme and evaluated it through an empirical user study with 35 participants. In this study, the owner's data could be protected, recovered, and anti-theft functionality could be performed unnoticed from the thief in all cases. IIFA proposes a novel approach for Android's inter-component/inter-app communication (ICC/IAC) analysis. Our main contribution is the first fully automatic, sound, and precise ICC/IAC information flow analysis that is scalable for realistic apps due to modularity, avoiding combinatorial explosion: Our approach determines communicating apps using short summaries rather than inlining intent calls between components and apps, which requires simultaneously analyzing all apps installed on a device. We evaluate IIFA in terms of precision, recall, and demonstrate its scalability to a large corpus of real-world apps. IIFA reports 62 problematic ICC-/IAC-related information flows via two or more apps/components. PIAnalyzer proposes a novel approach to analyze PendingIntent related vulnerabilities. PendingIntents are a powerful and universal feature of Android for inter-component communication. We empirically evaluate PIAnalyzer on a set of 1000 randomly selected applications and find 1358 insecure usages of PendingIntents, including 70 severe vulnerabilities. N2 - Die Nutzung von mobilen Geräten nimmt rasant zu, wobei Android das häufigste mobile Betriebssystem ist. Dank der Vielzahl an mobilen Anwendungen bevorzugen Benutzer Smartphones gegenüber Desktops für alltägliche Aufgaben wie das Surfen im Internet. Folglich speichern Smartphones eine Vielzahl sensibler Daten. Diese Daten zusammen mit den hohen Werten von Smartphones machen sie zu einem attraktiven Ziel für Geräte/Datendiebstahl (Diebe/bösartige Anwendungen). Leider funktionieren moderne Diebstahlsicherungslösungen nicht, wenn sie keine aktive Netzwerkverbindung haben, z. B. wenn die SIM-Karte aus dem Gerät entnommen wurde. In den meisten Fällen verlieren Gerätebesitzer ihr Smartphone dauerhaft zusammen mit ihren persönlichen Daten, was noch schlimmer ist. Abgesehen davon gibt es bösartige Anwendungen, die schädliche Aktivitäten ausführen, um vertrauliche Informationen von Smartphones zu stehlen. Kürzlich durchgeführte Untersuchungen berücksichtigten die statische Programmanalyse zur Erkennung gefährlicher Datenlecks. Diese Analysen eignen sich gut für Datenlecks aufgrund der Kommunikation zwischen Komponenten, weisen jedoch hinsichtlich der Präzision, Zuverlässigkeit und Skalierbarkeit Nachteile für die Kommunikation zwischen Apps auf. Diese Dissertation konzentriert sich auf die Verbesserung der Privatsphäre der Benutzer auf Android gegen Verlust/Diebstahl von physischen Geräten und (un)vorsätzlichen Datenverlust. Es werden drei neuartige Frameworks vorgestellt: (1) ThiefTrap, ein Anti-Diebstahl-Framework für Android, (2) IIFA, eine modulare Inter-App Analyse des Informationsflusses von Android Anwendungen, und (3) PIAnalyzer, ein präziser Ansatz für PendingIntent Schwachstellenanalyse. ThiefTrap basiert auf einem neuartigen Konzept eines Diebstahlschutzkontos, das die Daten des Besitzers schützt und verhindert, dass ein Dieb das Gerät zurücksetzt. Wir haben das vorgeschlagene Schema implementiert und durch eine empirische Anwenderstudie mit 35 Teilnehmern ausgewertet. In dieser Studie könnten die Daten des Besitzers geschützt und wiederhergestellt werden, und die Diebstahlsicherungsfunktion konnte in jedem Fall unbemerkt vom Dieb ausgeführt werden. IIFA schlägt einen neuen Ansatz für die Analyse von Komponenten zwischen Komponenten/ Inter-App Kommunikation (ICC/IAC) von Android vor. Unser Hauptbeitrag ist die erste vollautomatische, solide und präzise ICC/IAC Informationsflussanalyse, die aufgrund ihrer Modularität für realistische Apps skalierbar ist und eine kombinatorische Explosion vermeidet: Unser Ansatz bestimmt, dass Apps über kurze Zusammenfassungen kommuniziert werden, anstatt Absichtsaufrufe zwischen Komponenten zu verwenden und Apps, bei denen gleichzeitig alle auf einem Gerät installierten Apps analysiert werden müssen. Wir bewerten IIFA in Bezug auf Präzision, Rückruf und demonstrieren seine Skalierbarkeit für einen großen Korpus realer Apps. IIFA meldet 62 problematische ICC- / IAC-bezogene Informationsflüsse über zwei oder mehr Apps / Komponenten. PIAnalyzer schlägt einen neuen Ansatz vor, um Schwachstellen im Zusammenhang mit PendingIntent zu analysieren. PendingIntents nutzen eine leistungsstarke und universelle Funktion von Android für die Kommunikation zwischen Komponenten. Wir evaluieren PIAnalyzer empirisch an einem Satz von 1000 zufällig ausgewählten Anwendungen und finden 1358 unsichere Verwendungen von PendingIntents, einschließlich 70 schwerwiegender Schwachstellen. KW - Android Security KW - Static Analysis KW - Privacy Protection Y1 - 2019 ER - TY - JOUR A1 - Aguado, Felicidad A1 - Cabalar, Pedro A1 - Fandinno, Jorge A1 - Pearce, David A1 - Perez, Gilberto A1 - Vidal, Concepcion T1 - Forgetting auxiliary atoms in forks JF - Artificial intelligence N2 - In this work we tackle the problem of checking strong equivalence of logic programs that may contain local auxiliary atoms, to be removed from their stable models and to be forbidden in any external context. We call this property projective strong equivalence (PSE). It has been recently proved that not any logic program containing auxiliary atoms can be reformulated, under PSE, as another logic program or formula without them – this is known as strongly persistent forgetting. In this paper, we introduce a conservative extension of Equilibrium Logic and its monotonic basis, the logic of Here-and-There, in which we deal with a new connective ‘|’ we call fork. We provide a semantic characterisation of PSE for forks and use it to show that, in this extension, it is always possible to forget auxiliary atoms under strong persistence. We further define when the obtained fork is representable as a regular formula. KW - Answer set programming KW - Non-monotonic reasoning KW - Equilibrium logic KW - Denotational semantics KW - Forgetting KW - Strong equivalence Y1 - 2019 U6 - https://doi.org/10.1016/j.artint.2019.07.005 SN - 0004-3702 SN - 1872-7921 VL - 275 SP - 575 EP - 601 PB - Elsevier CY - Amsterdam ER - TY - GEN A1 - Fandinno, Jorge T1 - Founded (auto)epistemic equilibrium logic satisfies epistemic splitting T2 - Postprints der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe N2 - In a recent line of research, two familiar concepts from logic programming semantics (unfounded sets and splitting) were extrapolated to the case of epistemic logic programs. The property of epistemic splitting provides a natural and modular way to understand programs without epistemic cycles but, surprisingly, was only fulfilled by Gelfond's original semantics (G91), among the many proposals in the literature. On the other hand, G91 may suffer from a kind of self-supported, unfounded derivations when epistemic cycles come into play. Recently, the absence of these derivations was also formalised as a property of epistemic semantics called foundedness. Moreover, a first semantics proved to satisfy foundedness was also proposed, the so-called Founded Autoepistemic Equilibrium Logic (FAEEL). In this paper, we prove that FAEEL also satisfies the epistemic splitting property something that, together with foundedness, was not fulfilled by any other approach up to date. To prove this result, we provide an alternative characterisation of FAEEL as a combination of G91 with a simpler logic we called Founded Epistemic Equilibrium Logic (FEEL), which is somehow an extrapolation of the stable model semantics to the modal logic S5. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 1060 KW - answer set programming KW - epistemic specifications KW - epistemic logic programs Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-469685 SN - 1866-8372 IS - 1060 SP - 671 EP - 687 ER - TY - JOUR A1 - Cabalar, Pedro A1 - Fandinno, Jorge A1 - Schaub, Torsten H. A1 - Schellhorn, Sebastian T1 - Gelfond-Zhang aggregates as propositional formulas JF - Artificial intelligence N2 - Answer Set Programming (ASP) has become a popular and widespread paradigm for practical Knowledge Representation thanks to its expressiveness and the available enhancements of its input language. One of such enhancements is the use of aggregates, for which different semantic proposals have been made. In this paper, we show that any ASP aggregate interpreted under Gelfond and Zhang's (GZ) semantics can be replaced (under strong equivalence) by a propositional formula. Restricted to the original GZ syntax, the resulting formula is reducible to a disjunction of conjunctions of literals but the formulation is still applicable even when the syntax is extended to allow for arbitrary formulas (including nested aggregates) in the condition. Once GZ-aggregates are represented as formulas, we establish a formal comparison (in terms of the logic of Here-and-There) to Ferraris' (F) aggregates, which are defined by a different formula translation involving nested implications. In particular, we prove that if we replace an F-aggregate by a GZ-aggregate in a rule head, we do not lose answer sets (although more can be gained). This extends the previously known result that the opposite happens in rule bodies, i.e., replacing a GZ-aggregate by an F-aggregate in the body may yield more answer sets. Finally, we characterize a class of aggregates for which GZ- and F-semantics coincide. KW - Aggregates KW - Answer Set Programming Y1 - 2019 U6 - https://doi.org/10.1016/j.artint.2018.10.007 SN - 0004-3702 SN - 1872-7921 VL - 274 SP - 26 EP - 43 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Frioux, Clémence A1 - Schaub, Torsten H. A1 - Schellhorn, Sebastian A1 - Siegel, Anne A1 - Wanko, Philipp T1 - Hybrid metabolic network completion JF - Theory and practice of logic programming N2 - Metabolic networks play a crucial role in biology since they capture all chemical reactions in an organism. While there are networks of high quality for many model organisms, networks for less studied organisms are often of poor quality and suffer from incompleteness. To this end, we introduced in previous work an answer set programming (ASP)-based approach to metabolic network completion. Although this qualitative approach allows for restoring moderately degraded networks, it fails to restore highly degraded ones. This is because it ignores quantitative constraints capturing reaction rates. To address this problem, we propose a hybrid approach to metabolic network completion that integrates our qualitative ASP approach with quantitative means for capturing reaction rates. We begin by formally reconciling existing stoichiometric and topological approaches to network completion in a unified formalism. With it, we develop a hybrid ASP encoding and rely upon the theory reasoning capacities of the ASP system dingo for solving the resulting logic program with linear constraints over reals. We empirically evaluate our approach by means of the metabolic network of Escherichia coli. Our analysis shows that our novel approach yields greatly superior results than obtainable from purely qualitative or quantitative approaches. KW - answer set programming KW - metabolic network KW - gap-filling KW - linear programming KW - hybrid solving KW - bioinformatics Y1 - 2018 U6 - https://doi.org/10.1017/S1471068418000455 SN - 1471-0684 SN - 1475-3081 VL - 19 IS - 1 SP - 83 EP - 108 PB - Cambridge University Press CY - New York ER - TY - GEN A1 - Przybylla, Mareen T1 - Interactive objects in physical computing and their role in the learning process T2 - Constructivist foundations N2 - The target article discusses the question of how educational makerspaces can become places supportive of knowledge construction. This question is too often neglected by people who run makerspaces, as they mostly explain how to use different tools and focus on the creation of a product. In makerspaces, often pupils also engage in physical computing activities and thus in the creation of interactive artifacts containing embedded systems, such as smart shoes or wristbands, plant monitoring systems or drink mixing machines. This offers the opportunity to reflect on teaching physical computing in computer science education, where similarly often the creation of the product is so strongly focused upon that the reflection of the learning process is pushed into the background. Y1 - 2019 SN - 1782-348X VL - 14 IS - 3 SP - 264 EP - 266 PB - Vrije Univ. CY - Bussels ER -