TY - JOUR A1 - Eckert, Sebastian A1 - Vaz da Cruz, Vinícius A1 - Ochmann, Miguel A1 - Ahnen, Inga von A1 - Föhlisch, Alexander A1 - Huse, Nils T1 - Breaking the symmetry of pyrimidine BT - solvent effects and core-excited state dynamics JF - The journal of physical chemistry letters N2 - Symmetry and its breaking crucially define the chemical properties of molecules and their functionality. Resonant inelastic X-ray scattering is a local electronic structure probe reporting on molecular symmetry and its dynamical breaking within the femtosecond scattering duration. Here, we study pyrimidine, a system from the C-2v point group, in an aqueous solution environment, using scattering though its 2a(2) resonance. Despite the absence of clean parity selection rules for decay transitions from in-plane orbitals, scattering channels including decay from the 7b(2) and 11a(1) orbitals with nitrogen lone pair character are a direct probe for molecular symmetry. Computed spectra of explicitly solvated molecules sampled from a molecular dynamics simulation are combined with the results of a quantum dynamical description of the X-ray scattering process. We observe dominant signatures of core-excited Jahn-Teller induced symmetry breaking for resonant excitation. Solvent contributions are separable by shortening of the effective scattering duration through excitation energy detuning. Y1 - 2021 U6 - https://doi.org/10.1021/acs.jpclett.1c01865 SN - 1948-7185 VL - 12 IS - 35 SP - 8637 EP - 8643 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Ochmann, Miguel A1 - Vaz da Cruz, Vinicius A1 - Eckert, Sebastian A1 - Huse, Nils A1 - Föhlisch, Alexander T1 - R-Group stabilization in methylated formamides observed by resonant inelastic X-ray scattering JF - Chemical communications: ChemComm N2 - The inherent stability of methylated formamides is traced to a stabilization of the deep-lying sigma-framework by resonant inelastic X-ray scattering at the nitrogen K-edge. Charge transfer from the amide nitrogen to the methyl groups underlie this stabilization mechanism that leaves the aldehyde group essentially unaltered and explains the stability of secondary and tertiary amides. Y1 - 2022 U6 - https://doi.org/10.1039/d2cc00053a SN - 1359-7345 SN - 1364-548X VL - 58 IS - 63 SP - 8834 EP - 8837 PB - The Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Jay, Raphael M. A1 - Eckert, Sebastian A1 - Mitzner, Rolf A1 - Fondell, Mattis A1 - Föhlisch, Alexander T1 - Quantitative evaluation of transient valence orbital occupations in a 3d transition metal complex as seen from the metal and ligand perspective JF - Chemical physics letters N2 - It is demonstrated for the case of photo-excited ferrocyanide how time-resolved soft X-ray absorption spectroscopy in transmission geometry at the ligand K-edge and metal L-3-edge provides quantitatively equivalent valence electronic structure information, where signatures of photo-oxidation are assessed locally at the metal as well as the ligand. This allows for a direct and independent quantification of the number of photo-oxidized molecules at two soft X-ray absorption edges highlighting the sensitivity of X-ray absorption spectroscopy to the valence orbital occupation of 3d transition metal complexes throughout the soft X-ray range. KW - iron cyanides KW - photochemistry KW - soft X-ray absorption Y1 - 2020 U6 - https://doi.org/10.1016/j.cplett.2020.137681 SN - 0009-2614 SN - 1873-4448 VL - 754 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Vaz da Cruz, Vinícius A1 - Eckert, Sebastian A1 - Föhlisch, Alexander T1 - TD-DFT simulations of K-edge resonant inelastic X-ray scattering within the restricted subspace approximation JF - Physical chemistry, chemical physics : PCCP ; a journal of European Chemical Societies N2 - A scheme for simulations of resonant inelastic X-ray scattering (RIXS) cross-sections within time-dependent density functional theory (TD-DFT) applying the restricted subspace approximation (RSA) is presented. Therein both occupied core and valence Kohn-Sham orbitals are included in the donor-space, while the accepting virtual orbital space in the linear response TD-DFT equations is restricted to efficiently compute both the valence- and core-excited states of the many electron system. This yields a consistent description of all states contributing to the RIXS scattering process within a single calculation. The introduced orbital truncation allows to automatize the method and facilitates RIXS simulations for systems considerably larger than ones accessible with wave-function based methods. Using the nitrogen K-edge RIXS spectra of 2-thiopyridone and its deprotonated anion as a showcase, the method is benchmarked for different exchange-correlation functionals, the impact of the RSA is evaluated, and the effects of explicit solvation are discussed. Improvements compared to simulations in the frozen orbital approximation are also assessed. The general applicability of the framework is further tested by comparison to experimental data from the literature. The use of TD-DFT core-excited states to the calculation of vibrationally resolved RIXS spectra is also investigated by combining potential energy scans along relevant coordinates with wave packet simulations. Y1 - 2020 U6 - https://doi.org/10.1039/d0cp04726k SN - 1463-9076 SN - 1463-9084 VL - 23 IS - 3 SP - 1835 EP - 1848 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Eckert, Sebastian A1 - Mascarenhas, Eric Johnn A1 - Mitzner, Rolf A1 - Jay, Raphael Martin A1 - Pietzsch, Annette A1 - Fondell, Mattis A1 - Vaz da Cruz, Vinicius A1 - Föhlisch, Alexander T1 - From the free ligand to the transition metal complex BT - FeEDTA(-) formation seen at ligand K-Edges JF - Inorganic chemistry N2 - Chelating agents are an integral part of transition metal complex chemistry with broad biological and industrial relevance. The hexadentate chelating agent ethylenediaminetetraacetic acid (EDTA) has the capability to bind to metal ions at its two nitrogen and four of its carboxylate oxygen sites. We use resonant inelastic X-ray scattering at the 1s absorption edge of the aforementioned elements in EDTA and the iron(III)-EDTA complex to investigate the impact of the metal-ligand bond formation on the electronic structure of EDTA. Frontier orbital distortions, occupation changes, and energy shifts through metal- ligand bond formation are probed through distinct spectroscopic signatures. KW - Energy KW - Ligands KW - Metals KW - Nitrogen KW - Oxygen Y1 - 2022 U6 - https://doi.org/10.1021/acs.inorgchem.2c00789 SN - 0020-1669 SN - 1520-510X VL - 61 IS - 27 SP - 10321 EP - 10328 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Vaz da Cruz, Vinicius A1 - Büchner, Robby A1 - Fondell, Mattis A1 - Pietzsch, Annette A1 - Eckert, Sebastian A1 - Föhlisch, Alexander T1 - Targeting individual tautomers in equilibrium by resonant inelastic X-ray scattering JF - The journal of physical chemistry letters N2 - Tautomerism is one of the most important forms of isomerism, owing to the facile interconversion between species and the large differences in chemical properties introduced by the proton transfer connecting the tautomers. Spectroscopic techniques are often used for the characterization of tautomers. In this context, separating the overlapping spectral response of coexisting tautomers is a long-standing challenge in chemistry. Here, we demonstrate that by using resonant inelastic X-ray scattering tuned to the core excited states at the site of proton exchange between tautomers one is able to experimentally disentangle the manifold of valence excited states of each tautomer in a mixture. The technique is applied to the prototypical keto-enol equilibrium of 3-hydroxypyridine in aqueous solution. We detect transitions from the occupied orbitals into the LUMO for each tautomer in solution, which report on intrinsic and hydrogen-bond-induced orbital polarization within the pi and sigma manifolds at the proton-transfer site. KW - Equilibrium KW - Molecular structure KW - Molecules KW - Nitrogen KW - Solvents Y1 - 2022 U6 - https://doi.org/10.1021/acs.jpclett.1c03453 SN - 1948-7185 VL - 13 IS - 10 SP - 2459 EP - 2466 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Mascarenhas, Eric Johnn A1 - Fondell, Mattis A1 - Büchner, Robby A1 - Eckert, Sebastian A1 - Vaz da Cruz, Vinícius A1 - Föhlisch, Alexander T1 - Photo-induced ligand substitution of Cr(CO)(6) in 1-pentanol probed by time resolved X-ray absorption spectroscopy JF - Physical chemistry, chemical physics : a journal of European Chemical Societies N2 - Cr(CO)(6) was investigated by X-ray absorption spectroscopy. The spectral signature at the metal edge provides information about the back-bonding of the metal in this class of complexes. Among the processes it participates in is ligand substitution in which a carbonyl ligand is ejected through excitation to a metal to ligand charge transfer (MLCT) band. The unsaturated carbonyl Cr(CO)(5) is stabilized by solution media in square pyramidal geometry and further reacts with the solvent. Multi-site-specific probing after photoexcitation was used to investigate the ligand substitution photoreaction process which is a common first step in catalytic processes involving metal carbonyls. The data were analysed with the aid of TD-DFT computations for different models of photoproducts and signatures for ligand rearrangement after substitution were found. The rearrangement was found to occur in about 790 ps in agreement with former studies of the photoreaction. Y1 - 2022 U6 - https://doi.org/10.1039/d1cp05834g SN - 1463-9076 SN - 1463-9084 VL - 24 IS - 30 SP - 17979 EP - 17985 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Pietzsch, Annette A1 - Niskanen, Johannes A1 - Vaz da Cruz, Vinicius A1 - Büchner, Robby A1 - Eckert, Sebastian A1 - Fondell, Mattis A1 - Jay, Raphael Martin A1 - Lu, Xingye A1 - McNally, Daniel A1 - Schmitt, Thorsten A1 - Föhlisch, Alexander T1 - Cuts through the manifold of molecular H2O potential energy surfaces in liquid water at ambient conditions JF - Proceedings of the National Academy of Sciences of the United States of America N2 - The fluctuating hydrogen bridge bonded network of liquid water at ambient conditions entails a varied ensemble of the underlying constituting H2O molecular moieties. This is mirrored in a manifold of the H2O molecular potentials. Subnatural line width resonant inelastic X-ray scattering allowed us to quantify the manifold of molecular potential energy surfaces along the H2O symmetric normal mode and the local asymmetric O-H bond coordinate up to 1 and 1.5 angstrom, respectively. The comparison of the single H2O molecular potentials and spectroscopic signatures with the ambient conditions liquid phase H2O molecular potentials is done on various levels. In the gas phase, first principles, Morse potentials, and stepwise harmonic potential reconstruction have been employed and benchmarked. In the liquid phase the determination of the potential energy manifold along the local asymmetric O-H bond coordinate from resonant inelastic X-ray scattering via the bound state oxygen ls to 4a(1) resonance is treated within these frameworks. The potential energy surface manifold along the symmetric stretch from resonant inelastic X-ray scattering via the oxygen 1 s to 2b(2) resonance is based on stepwise harmonic reconstruction. We find in liquid water at ambient conditions H2O molecular potentials ranging from the weak interaction limit to strongly distorted potentials which are put into perspective to established parameters, i.e., intermolecular O-H, H-H, and O-O correlation lengths from neutron scattering. KW - water KW - potential ene rgy surface KW - RIXS Y1 - 2022 U6 - https://doi.org/10.1073/pnas.2118101119 SN - 1091-6490 VL - 119 IS - 28 PB - National Acad. of Sciences CY - Washington, DC ER - TY - JOUR A1 - Jay, Raphael M. A1 - Vaz da Cruz, Vinicius A1 - Eckert, Sebastian A1 - Fondell, Mattis A1 - Mitzner, Rolf A1 - Föhlisch, Alexander T1 - Probing solute-solvent interactions of transition metal complexes using L-edge absorption spectroscopy JF - The journal of physical chemistry : B, Condensed matter, materials, surfaces, interfaces & biophysical chemistry N2 - In order to tailor solution-phase chemical reactions involving transition metal complexes, it is critical to understand how their valence electronic charge distributions are affected by the solution environment. Here, solute-solvent interactions of a solvatochromic mixed-ligand iron complex were investigated using X-ray absorption spectroscopy at the transition metal L-2,L-3-edge. Due to the selectivity of the corresponding core excitations to the iron 3d orbitals, the method grants direct access to the valence electronic structure around the iron center and its response to interactions with the solvent environment. A linear increase of the total L-2,L-3-edge absorption cross section as a function of the solvent Lewis acidity is revealed. The effect is caused by relative changes in different metal-ligand-bonding channels, which preserve local charge densities while increasing the density of unoccupied states around the iron center. These conclusions are corroborated by a combination of molecular dynamics and spectrum simulations based on time-dependent density functional theory. The simulations reproduce the spectral trends observed in the X-ray but also optical absorption experiments. Our results underscore the importance of solute-solvent interactions when aiming for an accurate description of the valence electronic structure of solvated transition metal complexes and demonstrate how L-2,L-3-edge absorption spectroscopy can aid in understanding the impact of the solution environment on intramolecular covalency and the electronic charge distribution. KW - basis-sets KW - charge-transfer KW - density KW - dynamics KW - electron localization KW - iron KW - solvation KW - spin-crossover KW - tranfer excited-state KW - x-ray-absorption Y1 - 2020 U6 - https://doi.org/10.1021/acs.jpcb.0c00638 SN - 1520-6106 SN - 1520-5207 VL - 124 IS - 27 SP - 5636 EP - 5645 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Couto, Rafael C. A1 - Cruz, Vinicius V. A1 - Ertan, Emelie A1 - Eckert, Sebastian A1 - Fondell, Mattis A1 - Dantz, Marcus A1 - Kennedy, Brian A1 - Schmitt, Thorsten A1 - Pietzsch, Annette A1 - Guimaraes, Freddy F. A1 - Agren, Hans A1 - Odelius, Michael A1 - Kimberg, Victor A1 - Föhlisch, Alexander T1 - Selective gating to vibrational modes through resonant X-ray scattering JF - Nature Communications N2 - The dynamics of fragmentation and vibration of molecular systems with a large number of coupled degrees of freedom are key aspects for understanding chemical reactivity and properties. Here we present a resonant inelastic X-ray scattering (RIXS) study to show how it is possible to break down such a complex multidimensional problem into elementary components. Local multimode nuclear wave packets created by X-ray excitation to different core-excited potential energy surfaces (PESs) will act as spatial gates to selectively probe the particular ground-state vibrational modes and, hence, the PES along these modes. We demonstrate this principle by combining ultra-high resolution RIXS measurements for gas-phase water with state-of-the-art simulations. Y1 - 2017 U6 - https://doi.org/10.1038/ncomms14165 SN - 2041-1723 VL - 8 PB - Nature Publ. Group CY - London ER -