TY - JOUR A1 - Morgner, Frank A1 - Bennemann, Mark A1 - Cywiński, Piotr J. A1 - Kollosche, Matthias A1 - Górski, Krzysztof A1 - Pietraszkiewicz, Marek A1 - Geßner, André A1 - Löhmannsröben, Hans-Gerd T1 - Elastic FRET sensors for contactless pressure measurement JF - RSC Advances : an international journal to further the chemical sciences N2 - Contactless pressure monitoring based on Forster resonance energy transfer between donor/acceptor pairs immobilized within elastomers is demonstrated. The donor/acceptor energy transfer is employed by dispersing terbium(III) tris[(2-hydroxybenzoyl)-2-aminoethyl] amine complex (LLC, donor) and CdSe/ZnS quantum dots (QD655, acceptor) in styrene-ethylene/buthylene-styrene (SEBS) and poly(dimethylsiloxane) (PDMS). The continuous monitoring of QD luminescence showed a reversible intensity change as the pressure signal is alternated between two stable states indicating a pressure sensitivity of 6350 cps kPa(-1). Time-resolved measurements show the pressure impact on the FRET signal due to an increase of decay time (270 ms up to 420 ms) for the donor signal and parallel drop of decay time (170 mu s to 155 mu s) for the acceptor signal as the net pressure applied. The LLC/QD655 sensors enable a contactless readout as well as space resolved monitoring to enable miniaturization towards smaller integrated stretchable opto-electronics. Elastic FRET sensors can potentially lead to developing profitable analysis systems capable to outdo conventional wired electronic systems (inductive, capacitive, ultrasonic and photoelectric sensors) especially for point-of-care diagnostics, biological monitoring required for wearable electronics. Y1 - 2017 U6 - https://doi.org/10.1039/c7ra06379b SN - 2046-2069 VL - 7 SP - 50578 EP - 50583 PB - RSC Publishing CY - Cambridge ER - TY - JOUR A1 - Shainyan, Bagrat A. A1 - Belyakov, Alexander V. A1 - Sigolaev, Yurii F. A1 - Khramov, Alexander N. A1 - Kleinpeter, Erich T1 - Molecular Structure and Conformational Analysis of 1-Phenyl-1-X-1-Silacyclohexanes (X = F, Cl) by Electron Diffraction, Low-Temperature NMR, and Quantum Chemical Calculations JF - The journal of organic chemistry N2 - The molecular structure and conformational preferences of 1-phenyl-1-X-1-silacyclohexanes C5H10Si(Ph,X) (X = F (3), Cl (4)) were studied by gas-phase electron diffraction, low-temperature NMR spectroscopy, and high-level quantum chemical calculations. In the gas phase only three (3) and two (4) stable conformers differing in the axial or equatorial location of the phenyl group and the angle of rotation about the Si-C-ph bond (axi and axo denote the Ph group lying in or out of the X-Si-C-ph plane) contribute to the equilibrium. In 3 the ratio Ph-eq:Ph-axo:Ph-axi is 40(12):55(24):5 and 64:20:16 by experiment and theory, respectively. In 4 the ratio Ph-eq:Ph-axo is 79(15):21(15) and 71:29 by experiment and theory (M06-2X calculations), respectively. The gas-phase electron diffraction parameters are in good agreement with those obtained from theory at the M06-2X/aug-ccPVTZ and MP2/aug-cc-pVTZ levels. Unlike the case for M06-2X, MP2 calculations indicate that 3-Ph-eq conformer lies 0.5 kcal/mol higher than the 3-Ph-axo, conformer. As follows from QTAIM analysis, the phenyl group is more stable when it is located in the axial position but produces destabilization of the silacyclohexane ring: By low temperature NMR spectroscopy the six-membered ring interconversion could be frozen, at 103 K and the present conformational equilibria of 3 and 4 could be determined. The ratio of the conformers is 3-Ph-eq:3-Ph-ax = (75-77):(23-25) and 4-Ph-eq:4-Ph-ax = 82:18. Y1 - 2017 U6 - https://doi.org/10.1021/acs.joc.6b02538 SN - 0022-3263 VL - 82 IS - 1 SP - 461 EP - 470 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Hildebrand, Viet A1 - Laschewsky, Andre A1 - Päch, Michael A1 - Müller-Buschbaum, Peter A1 - Papadakis, Christine M. T1 - Effect of the zwitterion structure on the thermo-responsive behaviour of poly(sulfobetaine methacrylates) JF - Polymer Chemistry N2 - A series of new sulfobetaine methacrylates, including nitrogen-containing saturated heterocycles, was synthesised by systematically varying the substituents of the zwitterionic group. Radical polymerisation via the RAFT (reversible addition–fragmentation chain transfer) method in trifluoroethanol proceeded smoothly and was well controlled, yielding polymers with predictable molar masses. Molar mass analysis and control of the end-group fidelity were facilitated by end-group labeling with a fluorescent dye. The polymers showed distinct thermo-responsive behaviour of the UCST (upper critical solution temperature) type in an aqueous solution, which could not be simply correlated to their molecular structure via an incremental analysis of the hydrophilic and hydrophobic elements incorporated within them. Increasing the spacer length separating the ammonium and the sulfonate groups of the zwitterion moiety from three to four carbons increased the phase transition temperatures markedly, whereas increasing the length of the spacer separating the ammonium group and the carboxylate ester group on the backbone from two to three carbons provoked the opposite effect. Moreover, the phase transition temperatures of the analogous polyzwitterions decreased in the order dimethylammonio > morpholinio > piperidinio alkanesulfonates. In addition to the basic effect of the polymers’ precise molecular structure, the concentration and the molar mass dependence of the phase transition temperatures were studied. Furthermore, we investigated the influence of added low molar mass salts on the aqueous-phase behaviour for sodium chloride and sodium bromide as well as sodium and ammonium sulfate. The strong effects evolved in a complex way with the salt concentration. The strength of these effects depended on the nature of the anion added, increasing in the order sulfate < chloride < bromide, thus following the empirical Hofmeister series. In contrast, no significant differences were observed when changing the cation, i.e. when adding sodium or ammonium sulfate. Y1 - 2016 U6 - https://doi.org/10.1039/c6py01220e SN - 1759-9954 SN - 1759-9962 VL - 8 SP - 310 EP - 322 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Hoogenboom, Richard A1 - Schlaad, Helmut T1 - Thermoresponsive poly(2-oxazoline)s, polypeptoids, and polypeptides JF - Polymer Chemistry N2 - This review covers the recent advances in the emerging field of thermoresponsive polyamides or polymeric amides, i.e., poly(2-oxazoline)s, polypeptoids, and polypeptides, with a specific focus on structure-thermoresponsive property relationships, self-assembly, and applications. Y1 - 2016 U6 - https://doi.org/10.1039/c6py01320a SN - 1759-9954 SN - 1759-9962 VL - 8 IS - 1 SP - 24 EP - 40 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Schürmann, Robin Mathis A1 - Bald, Ilko T1 - Real-time monitoring of plasmon induced dissociative electron transfer to the potential DNA radiosensitizer 8-bromoadenine JF - Nanoscale N2 - The excitation of localized surface plasmons in noble metal nanoparticles (NPs) results in different nanoscale effects such as electric field enhancement, the generation of hot electrons and a temperature increase close to the NP surface. These effects are typically exploited in diverse fields such as surface-enhanced Raman scattering (SERS), NP catalysis and photothermal therapy (PTT). Halogenated nucleobases are applied as radiosensitizers in conventional radiation cancer therapy due to their high reactivity towards secondary electrons. Here, we use SERS to study the transformation of 8-bromoadenine ((8Br)A) into adenine on the surface of Au and AgNPs upon irradiation with a low-power continuous wave laser at 532, 633 and 785 nm, respectively. The dissociation of (8Br)A is ascribed to a hot-electron transfer reaction and the underlying kinetics are carefully explored. The reaction proceeds within seconds or even milliseconds. Similar dissociation reactions might also occur with other electrophilic molecules, which must be considered in the interpretation of respective SERS spectra. Furthermore, we suggest that hot-electron transfer induced dissociation of radiosensitizers such as (8Br)A can be applied in the future in PTT to enhance the damage of tumor tissue upon irradiation. Y1 - 2017 U6 - https://doi.org/10.1039/c6nr08695k SN - 2040-3364 SN - 2040-3372 VL - 9 SP - 1951 EP - 1955 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Lorenz, U. A1 - Saalfrank, Peter T1 - A novel system-bath Hamiltonian for vibration-phonon coupling BT - Formulation, and application to the relaxation of Si-H and Si-D bending modes of H/D:Si(100)-(2 x 1) JF - Chemical physics : a journal devoted to experimental and theoretical research involving problems of both a chemical and physical nature N2 - We present a rigorous method to set up a system-bath Hamiltonian for the coupling of adsorbate vibrations (the system) to surface phonons (the bath). The Hamiltonian is straightforward to derive and exact up to second order in the environment coordinates, thus capable of treating one- and two-phonon contributions to vibration-phonon coupling. The construction of the Hamiltonian uses orthogonal coordinates for system and bath modes, is based on an embedded cluster approach, and generalizes previous Hamiltonians of a similar type, but avoids several (additional) approximations. While the parametrization of the full Hamiltonian is in principle feasible by a first principles quantum mechanical treatment, here we adopt in the spirit of a QM/MM model a combination of density functional theory (“QM”, for the system) and a semiempirical forcefield (“MM”, for the bath). We apply the Hamiltonian to a fully H-covered Si(100)-(2 × 1) surface, using Fermi’s Golden Rule to obtain vibrational relaxation rates of various H–Si bending modes of this system. As in earlier work it is found that the relaxation is dominated by two-phonon contributions because of an energy gap between the Si–H bending modes and the Si phonon bands. We obtain vibrational lifetimes (of the first excited state) on the order of 2 ps at K. The lifetimes depend only little on the type of bending mode (symmetric vs. antisymmetric, parallel vs. perpendicular to the Si2H2 dimers). They decrease by a factor of about two when heating the surface to 300 K. We also study isotope effects by replacing adsorbed H atoms by deuterium, D. The Si–D bending modes are shifted into the Si phonon band of the solid, opening up one-phonon decay channels and reducing the lifetimes to few hundred fs. Y1 - 2016 U6 - https://doi.org/10.1016/j.chemphys.2016.06.004 SN - 0301-0104 SN - 1873-4421 VL - 482 SP - 69 EP - 80 PB - Elsevier Science CY - Amsterdam ER - TY - JOUR A1 - von Klitzing, Regine A1 - Stehl, Dimitrij A1 - Pogrzeba, Tobias A1 - Schomaäcker, Reinhard A1 - Minullina, Renata A1 - Panchal, Abhishek A1 - Konnova, Svetlana A1 - Fakhrullin, Rawil A1 - Koetz, Joachim A1 - Moehwald, Helmuth A1 - Lvov, Yuri T1 - Halloysites Stabilized Emulsions for Hydroformylation of Long Chain Olefins JF - Advanced materials interfaces N2 - Halloysites as tubular alumosilicates are introduced as inexpensive natural nanoparticles to form and stabilize oil-water emulsions. This stabilized emulsion is shown to enable efficient interfacial catalytic reactions. Yield, selectivity, and product separation can be tremendously enhanced, e.g., for the hydroformylation reaction of dodecene to tridecanal. In perspective, this type of formulation may be used for oil spill dispersions. The key elements of the described formulations are clay nanotubes (halloysites) which are highly anisometric, can be filled by helper molecules, and are abundantly available in thousands of tons, making this technology scalable for industrial applications. Y1 - 2016 U6 - https://doi.org/10.1002/admi.201600435 SN - 2196-7350 VL - 4 IS - 1 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Goulet-Hanssens, Alexis A1 - Utecht, Manuel A1 - Mutruc, Dragos A1 - Titov, Evgenii A1 - Schwarz, Jutta A1 - Grubert, Lutz A1 - Bleger, David A1 - Saalfrank, Peter A1 - Hecht, Stefan T1 - Electrocatalytic Z -> E Isomerization of Azobenzenes JF - Journal of the American Chemical Society N2 - A variety of azobenzenes were synthesized to study the behavior of their E and Z isomers upon electrochemical reduction. Our results show that the radical anion of the Z isomer is able to rapidly isomerize to the corresponding E configured counterpart with a dramatically enhanced rate as compared to the neutral species. Due to a subsequent electron transfer from the formed E radical anion to the neutral Z starting material the overall transformation is catalytic in electrons; i.e., a substoichiometric amount of reduced species can isomerize the entire mixture. This pathway greatly increases the efficiency of (photo)switching while also allowing one to reach photostationary state compositions that are not restricted to the spectral separation of the individual azobenzene isomers and their quantum yields. In addition, activating this radical isomerization pathway with photoelectron transfer agents allows us to override the intrinsic properties of an azobenzene species by triggering the reverse isomerization direction (Z -> E) by the same wavelength of light, which normally triggers E -> Z isomerization. The behavior we report appears to be general, implying that the metastable isomer of a photoswitch can be isomerized to the more stable one catalytically upon reduction, permitting the optimization of azobenzene switching in new as well as indirect ways. Y1 - 2017 U6 - https://doi.org/10.1021/jacs.6b10822 SN - 0002-7863 VL - 139 IS - 1 SP - 335 EP - 341 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Behrendt, Felix Nicolas A1 - Schlaad, Helmut T1 - Metathesis polymerization of cystine-based macrocycles JF - Polymer Chemistry N2 - Macrocycles based on L-cystine were synthesized by ring-closing metathesis (RCM) and subsequently polymerized by entropy-driven ring-opening metathesis polymerization (ED-ROMP). Monomer conversion reached similar to 80% in equilibrium and the produced poly (ester-amine-disulfide-alkene)s exhibited apparent molar masses (M-w(app)) of up to 80 kDa and dispersities (D) of similar to 2. The polymers can be further functionalized with acid anhydrides and degraded by reductive cleavage of the main-chain disulfide. Y1 - 2016 U6 - https://doi.org/10.1039/c6py01864e SN - 1759-9954 SN - 1759-9962 VL - 8 IS - 2 SP - 366 EP - 369 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Ehlert, Christopher A1 - Klamroth, Tillmann T1 - The quest for best suited references for configuration interaction singles calculations of core excited states JF - Journal of computational chemistry : organic, inorganic, physical, biological N2 - Near edge X-ray absorption fine structure (NEXAFS) simulations based on the conventional configuration interaction singles (CIS) lead to excitation energies, which are systematically blue shifted. Using a (restricted) open shell core hole reference instead of the Hartree Fock (HF) ground state orbitals improves (Decleva et al., Chem. Phys., 1992, 168, 51) excitation energies and the shape of the spectra significantly. In this work, we systematically vary the underlying SCF approaches, that is, based on HF or density functional theory, to identify best suited reference orbitals using a series of small test molecules. We compare the energies of the K edges and NEXAFS spectra to experimental data. The main improvement compared to conventional CIS, that is, using HF ground state orbitals, is due to the electrostatic influence of the core hole. Different SCF approaches, density functionals, or the use of fractional occupations lead only to comparably small changes. Furthermore, to account for bigger systems, we adapt the core-valence separation for our approach. We demonstrate that the good quality of the spectrum is not influenced by this approximation when used together with the non-separated ground state wave function. Simultaneously, the computational demands are reduced remarkably. (C) 2016 Wiley Periodicals, Inc. KW - core excited states KW - configuration interaction KW - near edge X-ray absorption fine structure Y1 - 2016 U6 - https://doi.org/10.1002/jcc.24531 SN - 0192-8651 SN - 1096-987X VL - 38 SP - 116 EP - 126 PB - Wiley-Blackwell CY - Hoboken ER - TY - JOUR A1 - Lippold, Holger A1 - Eidner, Sascha A1 - Kumke, Michael Uwe A1 - Lippmann-Pipke, Johanna T1 - Dynamics of metal-humate complexation equilibria as revealed by isotope exchange studies - a matter of concentration and time JF - Geochimica et cosmochimica acta : journal of the Geochemical Society and the Meteoritical Society N2 - Complexation with dissolved humic matter can be crucial in controlling the mobility of toxic or radioactive contaminant metals. For speciation and transport modelling, a dynamic equilibrium process is commonly assumed, where association and dissociation run permanently. This is, however, questionable in view of reported observations of a growing resistance to dissociation over time. In this study, the isotope exchange principle was employed to gain direct insight into the dynamics of the complexation equilibrium, including kinetic inertisation phenomena. Terbium(III), an analogue of trivalent actinides, was used as a representative of higher-valent metals. Isotherms of binding to (flocculated) humic acid, determined by means of Tb-160 as a radiotracer, were found to be identical regardless of whether the radioisotope was introduced together with the bulk of stable Tb-159 or subsequently after pre-equilibration for up to 3 months. Consequently, there is a permanent exchange of free and humic-bound Tb since all available binding sites are occupied in the plateau region of the isotherm. The existence of a dynamic equilibrium was thus evidenced. There was no indication of an inertisation under these experimental conditions. If the small amount of Tb-160 was introduced prior to saturation with Tb-159, the expected partial desorption of Tb-160 occurred at much lower rates than observed for the equilibration process in the reverse procedure. In addition, the rates decreased with time of pre-equilibration. Inertisation phenomena are thus confined to the stronger sites of humic molecules (occupied at low metal concentrations). Analysing the time-dependent course of isotope exchange according to first-order kinetics indicated that up to 3 years are needed to attain equilibrium. Since, however, metal-humic interaction remains reversible, exchange of metals between humic carriers and mineral surfaces cannot be neglected on the long time scale to be considered in predictive transport models. KW - Humic substances KW - Metal complexation KW - Kinetics KW - Reversibility KW - Isotope exchange KW - Dynamic equilibrium Y1 - 2016 U6 - https://doi.org/10.1016/j.gca.2016.10.019 SN - 0016-7037 SN - 1872-9533 VL - 197 SP - 62 EP - 70 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Michalik-Onichimowska, Aleksandra A1 - Beitz, Toralf A1 - Panne, Ulrich A1 - Löhmannsröben, Hans-Gerd A1 - Riedel, Jens T1 - Microsecond mid-infrared laser pulses for atmospheric pressure laser ablation/ionization of liquid samples JF - Sensors and actuators : B, Chemical N2 - In many laser based ionization techniques with a subsequent drift time separation, the laser pulse generating the ions is considered as the start time to. Therefore, an accurate temporal definition of this event is crucial for the resolution of the experiments. In this contribution, the laser induced plume dynamics of liquids evaporating into atmospheric pressure are visualized for two distinctively different laser pulse widths, Delta t = 6 nanoseconds and Delta tau = 280 microseconds. For ns-pulses the expansion of the generated vapour against atmospheric pressure is found to lead to turbulences inside the gas phase. This results in spatial and temporal broadening of the nascent clouds. A more equilibrated expansion, without artificial smearing of the temporal resolution can, in contrast, be observed to follow mu s-pulse excitation. This leads to the counterintuitive finding that longer laser pulses results in an increased temporal vapour formation definition. To examine if this fume expansion also eventually results in a better definition of ion formation, the nascent vapour plumes were expanded into a linear drift tube ion mobility spectrometer (IMS). This time resolved detection of ion formation corroborates the temporal broadening caused by collisional impeding of the supersonic expansion at atmospheric pressure and the overall better defined ion formation by evaporation with long laser pulses. A direct comparison of the observed results strongly suggests the coexistence of two individual ion formation mechanisms that can be specifically addressed by the use of appropriate laser sources. KW - Laser ablation KW - Ion mobility spectrometry KW - Pulse duration KW - Plume KW - Ionization Y1 - 2016 U6 - https://doi.org/10.1016/j.snb.2016.06.155 SN - 0925-4005 VL - 238 SP - 298 EP - 305 PB - Elsevier CY - Lausanne ER - TY - JOUR A1 - Rackwitz, Jenny A1 - Ranković, Miloš Lj. A1 - Milosavljević, Aleksandar R. A1 - Bald, Ilko T1 - A novel setup for the determination of absolute cross sections for low-energy electron induced strand breaks in oligonucleotides BT - the effect of the radiosensitizer 5-fluorouracil* JF - The European physical journal : D, Atomic, molecular, optical and plasma physics N2 - Low-energy electrons (LEEs) play an important role in DNA radiation damage. Here we present a method to quantify LEE induced strand breakage in well-defined oligonucleotide single strands in terms of absolute cross sections. An LEE irradiation setup covering electron energies <500 eV is constructed and optimized to irradiate DNA origami triangles carrying well-defined oligonucleotide target strands. Measurements are presented for 10.0 and 5.5 eV for different oligonucleotide targets. The determination of absolute strand break cross sections is performed by atomic force microscopy analysis. An accurate fluence determination ensures small margins of error of the determined absolute single strand break cross sections sigma SSB. In this way, the influence of sequence modification with the radiosensitive 5-Fluorouracil (U-5F) is studied using an absolute and relative data analysis. We demonstrate an increase in the strand break yields of U-5F containing oligonucleotides by a factor of 1.5 to 1.6 compared with non-modified oligonucleotide sequences when irradiated with 10 eV electrons. Y1 - 2017 U6 - https://doi.org/10.1140/epjd/e2016-70608-4 SN - 1434-6060 SN - 1434-6079 VL - 71 PB - Springer CY - New York ER - TY - JOUR A1 - Kelly, Mary Allison A1 - Roland, Steffen A1 - Zhang, Qianqian A1 - Lee, Youngmin A1 - Kabius, Bernd A1 - Wang, Qing A1 - Gomez, Enrique D. A1 - Neher, Dieter A1 - You, Wei T1 - Incorporating Fluorine Substitution into Conjugated Polymers for Solar Cells BT - three Different Means, Same Results JF - The journal of physical chemistry : C, Nanomaterials and interfaces N2 - Fluorinating conjugated polymers is a proven strategy for creating high performance materials in polymer solar cells, yet few studies have investigated the importance of the fluorination method. We compare the performance of three fluorinated systems: a poly(benzodithieno-dithienyltriazole) (PBnDT-XTAZ) random copolymer where 50% of the acceptor units are difluorinated, PBnDT-mFTAZ where every acceptor unit is monofluorinated, and a 1:1 physical blend of the difluorinated and nonfluorinated polymer. All systems have the same degree of fluorination (50%) yet via different methods (chemically vs physically, random vs regular). We show that these three systems have equivalent photovoltaic behavior:,similar to 5.2% efficiency with a short-circuit current (J(sc)) at,similar to 11 mA cm(-2), an open-circuit voltage (v(oc)) at 0.77 V, and a fill factor (FF) of similar to 60%. Further investigation of these three systems demonstrates that the charge generation, charge extraction, and charge transfer state are essentially identical for the three studied systems. Transmission electron microscopy shows no significant differences in the morphologies. All these data illustrate that it is possible to improve performance not only via regular or random fluorination but also by physical addition via a ternary blend. Thus, our results demonstrate the versatility of incorporating fluorine in the active layer of polymer solar cells to enhance device performance. Y1 - 2017 U6 - https://doi.org/10.1021/acs.jpcc.6b10993 SN - 1932-7447 VL - 121 IS - 4 SP - 2059 EP - 2068 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Schmidt, Bernd A1 - Audörsch, Stephan T1 - Stereoselective Total Syntheses of Polyacetylene Plant Metabolites via Ester-Tethered Ring Closing Metathesis JF - The journal of organic chemistry N2 - Total syntheses of five naturally occurring polyacetylenes from three different plants are described. These natural products have in common an E,Z-configured conjugated diene linked to a di-or triyne chain. As the key method to stereoselectively establish the E,Z-diene part, an ester-tethered ring-closing metathesis/base-induced eliminative ring opening sequence was used. The results presented herein do not only showcase the utility of this tethered RCM variant but have also prompted us to suggest that the originally assigned absolute configurations of chiral polyacetylenes from Atractylodes macrocephala should be revised or at least reconsidered. Y1 - 2017 U6 - https://doi.org/10.1021/acs.joc.6b02987 SN - 0022-3263 VL - 82 IS - 3 SP - 1743 EP - 1760 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Schweighöfer, F. A1 - Moreno, J. A1 - Bobone, Sara A1 - Chiantia, Salvatore A1 - Herrmann, A. A1 - Hecht, S. A1 - Wachtveitl, Josef T1 - Connectivity pattern modifies excited state relaxation dynamics of fluorophore-photoswitch molecular dyads JF - Physical chemistry, chemical physics : a journal of European Chemical Societies N2 - In order to modulate the emission of BODIPY fluorophores, they were connected to a diarylethene (DAE) photoswitch via phenylene-ethynylene linkers of different lengths and orientations. The latter allowed for modulation of the electronic coupling in the prepared four BODIPY-DAE dyads, which were compared also to appropriate BODIPY and DAE model compounds by steady state as well as time-resolved spectroscopies. In their open isomers, all dyads show comparable luminescence behavior indicative of an unperturbed BODIPY fluorophore. In strong contrast, in the closed isomers the BODIPY emission is efficiently quenched but the deactivation mechanism depends on the nature of the linker. The most promising dyad was rendered water-soluble by means of micellar encapsulation and aqueous suspensions were investigated by fluorescence spectroscopy and microscopy. Our results (i) illustrate that the electronic communication between the BODIPY and DAE units can indeed be fine-tuned by the nature of the linker to achieve fluorescence modulation while maintaining photoswitchability and (ii) highlight potential applications to image and control biological processes with high spatio-temporal resolution. Y1 - 2016 U6 - https://doi.org/10.1039/c6cp07112k SN - 1463-9076 SN - 1463-9084 VL - 19 SP - 4010 EP - 4018 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Reschke, Stefan A1 - Mebs, Stefan A1 - Sigfridsson-Clauss, Kajsa G. V. A1 - Kositzki, Ramona A1 - Leimkühler, Silke A1 - Haumann, Michael T1 - Protonation and Sulfido versus Oxo Ligation Changes at the Molybdenum Cofactor in Xanthine Dehydrogenase (XDH) Variants Studied by X-ray Absorption Spectroscopy JF - Inorganic chemistry N2 - Enzymes of the xanthine oxidase family are among the best characterized mononuclear molybdenum enzymes. Open questions about their mechanism of transfer of an oxygen atom to the substrate remain. The enzymes share a molybdenum cofactor (Moco) with the metal ion binding a molybdopterin (MPT) molecule via its dithiolene function and terminal sulfur and oxygen groups. For xanthine dehydrogenase (XDH) from the bacterium Rhodobacter capsulatus, we used X-ray absorption spectroscopy to determine the Mo site structure, its changes in a pH range of 5-10, and the influence of amino acids (Glu730 and Gln179) close to Moco in wild-type (WT), Q179A, and E730A variants, complemented by enzyme kinetics and quantum chemical studies. Oxidized WT and Q179A revealed a similar Mo (VI) ion with each one MPT, Mo=O, Mo-O-, and Mo=S ligand, and a weak Mo-O(E730) bond at alkaline pH. Protonation of an oxo to a hydroxo (OH) ligand (pK similar to 6.8) causes inhibition of XDH at acidic pH, whereas deprotonated xanthine (pK similar to 8.8) is an inhibitor at alkaline pH. A similar acidic pK for the WT and Q179A. variants, as well as the metrical parameters of the Mo site and density functional theory calculations, suggested protonation at the equatorial oxo group. The sulfido was replaced with an oxo ligand in the inactive E730A variant, further showing another oxo and one Mo OH ligand at Mo, which are independent of pH. Our findings suggest a reaction mechanism for XDH in which an initial oxo rather than a hydroxo group and the sulfido ligand are essential for xanthine oxidation. Y1 - 2017 U6 - https://doi.org/10.1021/acs.inorgchem.6b02846 SN - 0020-1669 SN - 1520-510X VL - 56 IS - 4 SP - 2165 EP - 2176 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Plötz, Per-Arno A1 - Megow, Jörg A1 - Niehaus, Thomas A1 - Kühn, Oliver T1 - Spectral densities for Frenkel exciton dynamics in molecular crystals BT - a TD-DFTB approach JF - The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr N2 - Effects of thermal fluctuations on the electronic excitation energies and intermonomeric Coulomb couplings are investigated for a perylene-tetracarboxylic-diimidecrystal. To this end, time dependent density functional theory based tight binding (TD-DFTB) in the linear response formulation is used in combination with electronic ground state classical molecular dynamics. As a result, a parametrized Frenkel exciton Hamiltonian is obtained, with the effect of exciton-vibrational coupling being described by spectral densities. Employing dynamically defined normal modes, these spectral densities are analyzed in great detail, thus providing insight into the effect of specific intramolecular motions on excitation energies and Coulomb couplings. This distinguishes the present method from approaches using fixed transition densities. The efficiency by which intramolecular contributions to the spectral density can be calculated is a clear advantage of this method as compared with standard TD-DFT. Published by AIP Publishing. Y1 - 2017 U6 - https://doi.org/10.1063/1.4976625 SN - 0021-9606 SN - 1089-7690 VL - 146 PB - American Institute of Physics CY - Melville ER - TY - JOUR A1 - Liebeck, Bernd Michael A1 - Hidalgo, Natalia A1 - Roth, Georg A1 - Popescu, Crisan A1 - Böker, Alexander T1 - Synthesis and characterization of Methyl Cellulose/Keratin Hydrolysate Composite Membranes JF - Polymers / Molecular Diversity Preservation International N2 - It is known that aqueous keratin hydrolysate solutions can be produced from feathers using superheated water as solvent. This method is optimized in this study by varying the time and temperature of the heat treatment in order to obtain a high solute content in the solution. With the dissolved polypeptides, films are produced using methyl cellulose as supporting material. Thereby, novel composite membranes are produced from bio-waste. It is expected that these materials exhibit both protein and polysaccharide properties. The influence of the embedded keratin hydrolysates on the methyl cellulose structure is investigated using Fourier transform infrared spectroscopy (FTIR) and wide angle X-ray diffraction (WAXD). Adsorption peaks of both components are present in the spectra of the membranes, while the X-ray analysis shows that the polypeptides are incorporated into the semi-crystalline methyl cellulose structure. This behavior significantly influences the mechanical properties of the composite films as is shown by tensile tests. Since further processing steps, e.g., crosslinking, may involve a heat treatment, thermogravimetric analysis (TGA) is applied to obtain information on the thermal stability of the composite materials. KW - bio-based KW - composite materials KW - methyl cellulose KW - keratin KW - superheated water Y1 - 2017 U6 - https://doi.org/10.3390/polym9030091 SN - 2073-4360 VL - 9 PB - MDPI CY - Basel ER - TY - JOUR A1 - Schmidt, Bernd A1 - Riemer, Martin T1 - Microwave-Promoted Pd-Catalyzed Synthesis of Dibenzofurans from Ortho-Arylphenols JF - Journal of Heterocyclic Chemistry N2 - ortho-Aryl phenols, synthesized via protecting group free Suzuki-Miyaura coupling of ortho-halophenols and arene boronic acids, undergo a cyclization to dibenzofurans via oxidative C-H activation. The reaction proceeds under microwave irradiation in short reaction times using catalytic amounts of Pd(OAc)(2) without additional ligands. Y1 - 2017 U6 - https://doi.org/10.1002/jhet.2704 SN - 0022-152X SN - 1943-5193 VL - 54 IS - 2 SP - 1287 EP - 1297 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Meyners, Christian A1 - Mertens, Monique A1 - Wessig, Pablo A1 - Meyer-Almes, Franz-Josef T1 - A Fluorescence-Lifetime-Based Binding Assay for Class IIa Histone Deacetylases JF - Chemistry - a European journal N2 - Class IIa histone deacetylases (HDACs) show extremely low enzymatic activity and no commonly accepted endogenous substrate is known today. Increasing evidence suggests that these enzymes exert their effect rather through molecular recognition of acetylated proteins and recruiting other proteins like HDAC3 to the desired target location. Accordingly, class IIa HDACs like bromodomains have been suggested to act as “Readers” of acetyl marks, whereas enzymatically active HDACs of class I or IIb are called “Erasers” to highlight their capability to remove acetyl groups from acetylated histones or other proteins. Small-molecule ligands of class IIa histone deacetylases (HDACs) have gained tremendous attention during the last decade and have been suggested as pharmaceutical targets in several indication areas such as cancer, Huntington's disease and muscular atrophy. Up to now, only enzyme activity assays with artificial chemically activated trifluoroacetylated substrates are in use for the identification and characterization of new active compounds against class IIa HDACs. Here, we describe the first binding assay for this class of HDAC enzymes that involves a simple mix-and-measure procedure and an extraordinarily robust fluorescence lifetime readout based on [1,3]dioxolo[4,5-f]benzodioxole-based ligand probes. The principle of the assay is generic and can also be transferred to class I HDAC8. KW - drug discovery KW - enzymes KW - fluorescent probes KW - high-throughput screening KW - hydrolases Y1 - 2017 U6 - https://doi.org/10.1002/chem.201605140 SN - 0947-6539 SN - 1521-3765 VL - 23 IS - 13 SP - 3107 EP - 3116 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Malyar, Ivan V. A1 - Titov, Evgenii A1 - Lomadze, Nino A1 - Saalfrank, Peter A1 - Santer, Svetlana T1 - Photoswitching of azobenzene-containing self-assembled monolayers as a tool for control over silicon surface electronic properties JF - The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr N2 - We report on photoinduced remote control of work function and surface potential of a silicon surface modified with a photosensitive self-assembled monolayer consisting of chemisorbed azobenzene molecules (4-nitroazobenzene). Itwas found that the attachment of the organic monolayer increases the work function by hundreds of meV due to the increase in the electron affinity of silicon substrates. The change in the work function on UV light illumination is more pronounced for the azobenzene jacketed silicon substrate (ca. 250 meV) in comparison to 50 meV for the unmodified surface. Moreover, the photoisomerization of azobenzene results in complex kinetics of thework function change: immediate decrease due to light-driven processes in the silicon surface followed by slower recovery to the initial state due to azobenzene isomerization. This behavior could be of interest for electronic devices where the reaction on irradiation should be more pronounced at small time scales but the overall surface potential should stay constant over time independent of the irradiation conditions. Published by AIP Publishing. Y1 - 2017 U6 - https://doi.org/10.1063/1.4978225 SN - 0021-9606 SN - 1089-7690 VL - 146 PB - American Institute of Physics CY - Melville ER - TY - JOUR A1 - Selemani, Ramadhani Selemani Omari A1 - Nondo, Omari A1 - Moshi, Mainen Julius A1 - Erasto, Paul A1 - Masimba, Pax Jessey A1 - Machumi, Francis A1 - Kidukuli, Abdul Waziri A1 - Heydenreich, Matthias A1 - Zofou, Denis T1 - Anti-plasmodial activity of Norcaesalpin D and extracts of four medicinal plants used traditionally for treatment of malaria JF - BMC Complementary and Alternative Medicine volume N2 - Background: Malaria is an old life-threatening parasitic disease that is still affecting many people, mainly children living in sub-Saharan Africa. Availability of effective antimalarial drugs played a significant role in the treatment and control of malaria. However, recent information on the emergence of P. falciparum parasites resistant to one of the artemisinin-based combination therapies suggests the need for discovery of new drug molecules. Therefore, this study aimed to evaluate the antiplasmodial activity of extracts, fractions and isolated compound from medicinal plants traditionally used in the treatment of malaria in Tanzania. Methods: Dry powdered plant materials were extracted by cold macerations using different solvents. Norcaesalpin D was isolated by column chromatography from dichloromethane root extract of Caesalpinia bonducella and its structure was assigned based on the spectral data. Crude extracts, fractions and isolated compound were evaluated for antiplasmodial activity against chloroquine-sensitive P. falciparum (3D7), chloroquine-resistant P. falciparum (Dd2, K1) and artemisinin-resistant P. falciparum (IPC 5202 Battambang, IPC 4912 Mondolkiri) strains using the parasite lactate dehydrogenase assay. Results: The results indicated that extracts of Erythrina schliebenii, Holarrhena pubescens, Dissotis melleri and C. bonducella exhibited antiplasmodial activity against Dd2 parasites. Ethanolic root extract of E. schliebenii had an IC50 of 1.87 mu g/mL while methanolic and ethanolic root extracts of H. pubescens exhibited an IC50 = 2.05 mu g/mL and IC50 = 2.43 mu g/mL, respectively. Fractions from H. pubescens and C. bonducella roots were found to be highly active against K1, Dd2 and artemisinin-resistant parasites. Norcaesalpin D from C. bonducella root extract was active with IC50 of 0.98, 1.85 and 2.13 mu g/mL against 3D7, Dd2 and IPC 4912-Mondolkiri parasites, respectively. Conclusions: Antiplasmodial activity of norcaesalpin D and extracts of E. schliebenii, H. pubescens, D. melleri and C. bonducella reported in this study requires further attention for the discovery of antimalarial lead compounds for future drug development. KW - Antiplasmodial KW - norcaesalpin D KW - E. schliebenii KW - H. pubescens KW - D. melleri KW - C. bonducella Y1 - 2017 U6 - https://doi.org/10.1186/s12906-017-1673-8 SN - 1472-6882 VL - 17 PB - BioMed Central CY - London ER - TY - JOUR A1 - Liu, Yue A1 - Razzaq, Muhammad Yasar A1 - Rudolph, Tobias A1 - Fang, Liang A1 - Kratz, Karl A1 - Lendlein, Andreas T1 - Two-Level Shape Changes of Polymeric Microcuboids Prepared from Crystallizable Copolymer Networks JF - Macromolecules : a publication of the American Chemical Society N2 - Polymeric microdevices bearing features like nonspherical shapes or spatially segregated surface properties are of increasing importance in biological and medical analysis, drug delivery, and bioimaging or microfluidic systems as well as in micromechanics, sensors, information storage, or data carrier devices. Here, a method to fabricate programmable microcuboids with shape-memory capability and the quantification of their recovery at different levels is reported. The method uses the soft lithographic technique to create microcuboids with well-defined sizes and surface properties. Microcuboids having an edge length of 25 mu m and a height of 10 mu m were prepared from cross-linked poly[ethylene-co-(vinyl acetate)] (cPEVA) with different vinyl acetate contents and were programmed by compression with various deformation degrees at elevated temperatures. The microlevel shape-recovery of the cuboidal geometry during heating was monitored by optical microscopy (OM) and atomic force microscopy (AFM) studying the related changes in the projected area (PA) or height, while the nanolevel changes of the nanosurface roughness were investigated by in situ AFM. The shape-memory effect at the microlevel was quantified by the recovery ratio of cuboids (R-r,R-micro), while at the. nanolevel, the recovery ratio of the nanoroughness (R-r,R-nano) was measured. The values of R-r,R-micro,,micro could be tailored in a range from 42 +/- 1% to 102 +/- 1% and Rr,nano from 89 +/- 6% to 136 +/- 21% depending on the applied compression ratio and the amount of vinyl acetate content in the cPEVA microcuboids. Y1 - 2017 U6 - https://doi.org/10.1021/acs.macromol.6b02237 SN - 0024-9297 SN - 1520-5835 VL - 50 SP - 2518 EP - 2527 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Lutze, Jana A1 - Bañares, Miguel A. A1 - Pita, Marcos A1 - Haase, Andrea A1 - Luch, Andreas A1 - Taubert, Andreas T1 - alpha-((4-Cyanobenzoyl)oxy)-omega-methyl poly(ethylene glycol) BT - a new stabilizer for silver nanoparticles JF - Beilstein journal of nanotechnology N2 - The article describes the synthesis and properties of alpha-((4-cyanobenzoyl)oxy)-omega-methyl poly(ethylene glycol), the first poly(ethylene glycol) stabilizer for metal nanoparticles that is based on a cyano rather than a thiol or thiolate anchor group. The silver particles used to evaluate the effectiveness of the new stabilizer typically have a bimodal size distribution with hydrodynamic diameters of ca. 13 and ca. 79 nm. Polymer stability was evaluated as a function of the pH value both for the free stabilizer and for the polymers bound to the surface of the silver nanoparticles using H-1 NMR spectroscopy and zeta potential measurements. The polymer shows a high stability between pH 3 and 9. At pH 12 and higher the polymer coating is degraded over time suggesting that alpha-((4-cyanobenzoyl) oxy)-omega-methyl poly(ethylene glycol) is a good stabilizer for metal nanoparticles in aqueous media unless very high pH conditions are present in the system. The study thus demonstrates that cyano groups can be viable alternatives to the more conventional thiol/thiolate anchors. KW - cyano anchor group KW - poly(ethylene glycol) KW - polymer coating KW - silver nanoparticles Y1 - 2017 U6 - https://doi.org/10.3762/bjnano.8.67 SN - 2190-4286 VL - 8 SP - 627 EP - 635 PB - Beilstein-Institut zur Förderung der Chemischen Wissenschaften CY - Frankfurt, Main ER - TY - JOUR A1 - Taubert, Andreas A1 - Löbbicke, Ruben A1 - Kirchner, Barbara A1 - Leroux, Fabrice T1 - First examples of organosilica-based ionogels BT - synthesis and electrochemical behavior JF - Beilstein journal of nanotechnology N2 - The article describes the synthesis and properties of new ionogels for ion transport. A new preparation process using an organic linker, bis(3-(trimethoxysilyl) propyl) amine (BTMSPA), yields stable organosilica matrix materials. The second ionogel component, the ionic liquid 1-methyl-3-(4-sulfobutyl) imidazolium 4-methylbenzenesulfonate, [BmimSO(3)H][PTS], can easily be prepared with near-quantitative yields. [BmimSO(3)H][PTS] is the proton conducting species in the ionogel. By combining the stable organosilica matrix with the sulfonated ionic liquid, mechanically stable, and highly conductive ionogels with application potential in sensors or fuel cells can be prepared. KW - ionic liquids KW - ionogels KW - organosilica KW - proton conductivity Y1 - 2017 U6 - https://doi.org/10.3762/bjnano.8.77 SN - 2190-4286 VL - 8 SP - 736 EP - 751 PB - Beilstein-Institut zur Förderung der Chemischen Wissenschaften CY - Frankfurt, Main ER - TY - JOUR A1 - Heck, Christian A1 - Prinz, Julia A1 - Dathe, Andre A1 - Merk, Virginia A1 - Stranik, Ondrej A1 - Fritzsche, Wolfgang A1 - Kneipp, Janina A1 - Bald, Ilko T1 - Gold Nanolenses Self-Assembled by DNA Origami JF - ACS Photonics N2 - Nanolenses are self-similar chains of metal nanoparticles, which can theoretically provide extremely high field enhancements. Yet, the complex structure renders their synthesis challenging and has hampered closer analyses so far. Here, DNA origami is used to self-assemble 10, 20, and 60 nm gold nanoparticles as plasmonic gold nanolenses (AuNLs) in solution and in billions of copies. Three different geometrical arrangements are assembled, and for each of the three designs, surface-enhanced Raman scattering (SERS) capabilities of single AuNLs are assessed. For the design which shows the best properties, SERS signals from the two different internal gaps are compared by selectively placing probe dyes. The highest Raman enhancement is found for the gap between the small and medium nanoparticle, which is indicative of a cascaded field enhancement. KW - plasmonics KW - DNA origami KW - SERS KW - nanolenses KW - gold nanoparticles Y1 - 2017 U6 - https://doi.org/10.1021/acsphotonics.6b00946 SN - 2330-4022 VL - 4 SP - 1123 EP - 1130 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Unuabonah, Emmanuel Iyayi A1 - Kolawole, Matthew O. A1 - Agunbiade, Foluso O. A1 - Omorogie, Martins O. A1 - Koko, Daniel T. A1 - Ugwuja, Chidinma G. A1 - Ugege, Leonard E. A1 - Oyejide, Nicholas E. A1 - Günter, Christina A1 - Taubert, Andreas T1 - Novel metal-doped bacteriostatic hybrid clay composites for point-of-use disinfection of water JF - Journal of Environmental Chemical Engineering N2 - This study reports the facile microwave-assisted thermal preparation of novel metal-doped hybrid clay composite adsorbents consisting of Kaolinite clay, Carica papaya seeds and/or plantain peels (Musa paradisiaca) and ZnCl2. Fourier Transformed IR spectroscopy, X-ray diffraction, Scanning Electron Microscopy and Brunauer-Emmett-Teller (BET) analysis are employed to characterize these composite adsorbents. The physicochemical analysis of these composites suggests that they act as bacteriostatic rather than bacteriacidal agents. This bacterostactic action is induced by the ZnO phase in the composites whose amount correlates with the efficacy of the composite. The composite prepared with papaya seeds (PS-HYCA) provides the best disinfection efficacy (when compared with composite prepared with Musa paradisiaca peels-PP-HYCA) against gram-negative enteric bacteria with a breakthrough time of 400 and 700 min for the removal of 1.5 x10(6) cfu/mL S. typhi and V. cholerae from water respectively. At 10(3) cfu/mL of each bacterium in solution, 2 g of both composite adsorbents kept the levels the bacteria in effluent solutions at zero for up to 24 h. Steam regeneration of 2 g of bacteria-loaded Carica papaya prepared composite adsorbent shows a loss of ca. 31% of its capacity even after the 3rd regeneration cycle of 25 h of service time. The composite adsorbent prepared with Carica papaya seeds will be useful for developing simple point-of-use water treatment systems for water disinfection application. This composite adsorbent is comparatively of good performance and shows relatively long hydraulic contact times and is expected to minimize energy intensive traditional treatment processes. KW - Kaolinite KW - Composites KW - Bacteria KW - Breakthrough time KW - Regeneration Y1 - 2017 U6 - https://doi.org/10.1016/j.jece.2017.04.017 SN - 2213-3437 VL - 5 SP - 2128 EP - 2141 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Wolf, Thomas J. A. A1 - Holzmeier, Fabian A1 - Wagner, Isabella A1 - Berrah, Nora A1 - Bostedt, Christoph A1 - Bozek, John A1 - Bucksbaum, Phil A1 - Coffee, Ryan A1 - Cryan, James A1 - Farrell, Joe A1 - Feifel, Raimund A1 - Martinez, Todd J. A1 - McFarland, Brian A1 - Mucke, Melanie A1 - Nandi, Saikat A1 - Tarantelli, Francesco A1 - Fischer, Ingo A1 - Gühr, Markus T1 - Observing Femtosecond Fragmentation Using Ultrafast X-ray-Induced Auger Spectra JF - Applied sciences N2 - Molecules often fragment after photoionization in the gas phase. Usually, this process can only be investigated spectroscopically as long as there exists electron correlation between the photofragments. Important parameters, like their kinetic energy after separation, cannot be investigated. We are reporting on a femtosecond time-resolved Auger electron spectroscopy study concerning the photofragmentation dynamics of thymine. We observe the appearance of clearly distinguishable signatures from thymines neutral photofragment isocyanic acid. Furthermore, we observe a time-dependent shift of its spectrum, which we can attribute to the influence of the charged fragment on the Auger electron. This allows us to map our time-dependent dataset onto the fragmentation coordinate. The time dependence of the shift supports efficient transformation of the excess energy gained from photoionization into kinetic energy of the fragments. Our method is broadly applicable to the investigation of photofragmentation processes. KW - ultrafast dynamics KW - Auger electron spectroscopy KW - photofragmentation KW - photochemistry Y1 - 2017 U6 - https://doi.org/10.3390/app7070681 SN - 2076-3417 VL - 7 IS - 7 PB - MDPI CY - Basel ER - TY - JOUR A1 - Brunacci, Nadia A1 - Wischke, Christian A1 - Naolou, Toufik A1 - Neffe, Axel T. A1 - Lendlein, Andreas T1 - Influence of surfactants on depsipeptide submicron particle formation JF - European Journal of Pharmaceutics and Biopharmaceutics N2 - Surfactants are required for the formation and stabilization of hydrophobic polymeric particles in aqueous environment. In order to form submicron particles of varying sizes from oligo[3-(S)-sec-butylmorpholine-2,5-dione]diols ((OBMD)-diol), different surfactants were investigated. As new surfactants, four-armed star-shaped oligo(ethylene glycol)s of molecular weights of 5-20 kDa functionalized with desamino-tyrosine (sOEG-DAT) resulted in smaller particles with lower PDI than with desaminotyrosyl tyrosine (sOEG-DATT) in an emulsion/solvent evaporation method. In a second set of experiments, sOEG-DAT of M-n= 10 kDa was compared with the commonly employed emulsifiers polyvinylalcohol (PVA), polyoxyethylene (20) sorbitan monolaurate (Tween 20), and D-alpha-tocopherol polyethylene glycol succinate (VIT E-TPGS) for OBMD particle preparation. sOEG-DAT allowed to systematically change sizes in a range of 300 up to 900 nm with narrow polydispersity, while in the other cases, a lower size range (250-400 nm, PVA; 300 nm, Tween 20) or no effective particle formation was observed. The ability of tailoring particle size in a broad range makes sOEG-DAT of particular interest for the formation of oligodepsipeptide particles, which can further be investigated as drug carriers for controlled delivery. (C) 2016 Elsevier B.V. All rights reserved. KW - Depsipeptide KW - Particle size KW - Surfactants KW - Submicron particles Y1 - 2017 U6 - https://doi.org/10.1016/j.ejpb.2016.11.011 SN - 0939-6411 SN - 1873-3441 VL - 116 SP - 61 EP - 65 PB - Elsevier CY - Amsterdam ER - TY - GEN A1 - Naolou, Toufik A1 - Rühl, Eckart A1 - Lendlein, Andreas T1 - Nanocarriers BT - Architecture, transport, and topical application of drugs for therapeutic use T2 - European Journal of Pharmaceutics and Biopharmaceutics Y1 - 2017 U6 - https://doi.org/10.1016/j.ejpb.2017.03.004 SN - 0939-6411 SN - 1873-3441 VL - 116 SP - 1 EP - 3 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Deyou, Tsegaye A1 - Marco, Makungu A1 - Heydenreich, Matthias A1 - Pan, Fangfang A1 - Gruhonjic, Amra A1 - Fitzpatrick, Paul A. A1 - Koch, Andreas A1 - Derese, Solomon A1 - Pelletier, Jerry A1 - Rissanen, Kari A1 - Yenesew, Abiy A1 - Erdelyi, Mate T1 - Isoflavones and Rotenoids from the Leaves of Millettia oblata ssp teitensis JF - Journal of natural products N2 - A new isoflavone, 8-prenylmilldrone (1), and four new rotenoids, oblarotenoids A-D (2-5), along with nine known compounds (6-14), were isolated from the CH2Cl2/CH3OH (1:1) extract of the leaves of Millettia oblata ssp. teitensis by chromatographic separation. The purified compounds were identified by NMR spectroscopic and mass spectrometric analyses, whereas the absolute configurations of the rotenoids were established on the basis of chiroptical data and in some cases by single-crystal X-ray crystallography. Maximaisoflavone J (11) and oblarotenoid C (4) showed weak activity against the human breast cancer cell line MDA-MB-231 with IC50 values of 33.3 and 93.8 mu M, respectively. Y1 - 2017 U6 - https://doi.org/10.1021/acs.jnatprod.7b00255 SN - 0163-3864 SN - 1520-6025 VL - 80 SP - 2060 EP - 2066 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Utecht, Manuel Martin A1 - Palmer, Richard E. A1 - Klamroth, Tillmann T1 - Quantum chemical approach to atomic manipulation of chlorobenzene on the Si(111)-7 x 7 surface BT - Resonance localization, vibrational activation, and surface dynamics JF - Physical review materials N2 - We present a cluster model to describe the localization of hot charge carriers on the Si(111)-7 x 7 surface, which leads to (nonlocal) desorption of chlorobenzene molecules in scanning tunneling microscope (STM) manipulation experiments. The localized charge carriers are modeled by a small cluster. By means of quantum chemical calculations, this cluster model explains many experimental findings from STM manipulation. We show that the negative charge is mainly localized in the surface, while the positive one also resides on the molecule. Both resonances boost desorption: In the negative resonance the adatom is elevated; in the positive one the chemisorption bond between the silicon surface adatom and chlorobenzene is broken. We find normal modes promoting desorption matching experimental low-temperature activation energies for electron-and hole-induced desorption. Y1 - 2017 U6 - https://doi.org/10.1103/PhysRevMaterials.1.026001 SN - 2475-9953 VL - 1 IS - 2 PB - American Physical Society CY - College Park ER - TY - JOUR A1 - Adebayo, Segun Emmanuel A1 - Hashim, Norhashila A1 - Hass, Roland A1 - Reich, Oliver A1 - Regen, Christian A1 - Münzberg, Marvin A1 - Abdan, Khalina A1 - Hanafi, Marsyita A1 - Zude, Manuela T1 - Using absorption and reduced scattering coefficients for non-destructive analyses of fruit flesh firmness and soluble solids content in pear JF - Postharvest Biology and Technology N2 - Quality attributes of fruit determine its acceptability by the retailer and consumer. The objective of this work was to investigate the potential of absorption (μa) and reduced scattering (μs’) coefficients of European pear to analyze its fruit flesh firmness and soluble solids content (SSC). The absolute reference values, μa* (cm−1) and μs’* (cm−1), of pear were invasively measured, employing multi-spectral photon density wave (PDW) spectroscopy at preselected wavelengths of 515, 690, and 940 nm considering two batches of unripe and overripe fruit. On eight measuring dates during fruit development, μa and μs’ were analyzed non-destructively by means of laser light backscattering imaging (LLBI) at similar wavelengths of 532, 660, and 830 nm by means of fitting according to Farrell’s diffusion theory, using fix reference values of either μa* or μs’*. Both, the μa* and the μa as well as μs’* and μs’ showed similar trends. Considering the non-destructively measured data during fruit development, μa at 660 nm decreased 91 till 141 days after full bloom (dafb) from 1.49 cm−1 to 0.74 cm−1 due to chlorophyll degradation. At 830 nm, μa only slightly decreased from 0.41 cm−1 to 0.35 cm−1. The μs’ at all wavelengths revealed a decreasing trend as the fruit developed. The difference measured at 532 nm was most pronounced decreasing from 24 cm−1 to 10 cm−1, while at 660 nm and 830 nm values decreased from 15 cm−1 to 13 cm−1 and from 10 cm−1 to 8 cm−1, respectively. When building calibration models with partial least-squares regression analysis on the optical properties for non-destructive analysis of the fruit SSC, μa at 532 nm and 830 nm resulted in a correlation coefficient of R = 0.66, however, showing high measuring uncertainty. The combination of all three wavelengths gave an enhanced, encouraging R = 0.89 for firmness analysis using μs’ in the freshly picked fruit. KW - Absorption KW - Non-destructive KW - Pear KW - Quality KW - Scattering Y1 - 2017 U6 - https://doi.org/10.1016/j.postharvbio.2017.04.004 SN - 0925-5214 SN - 1873-2356 VL - 130 SP - 56 EP - 63 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Balderas-Valadez, Ruth Fabiola A1 - Antunez, E. E. A1 - Olive-Mendez, Sion Federico A1 - Pacholski, Claudia A1 - Campos-Alvarez, Jose A1 - Bokhimi, Xim A1 - Agarwal, V. T1 - Porous silicon pillar and bilayer structure as a nucleation center for the formation of aligned vanadium pentoxide nanorods JF - Ceramics International N2 - Porous silicon single layer (PSM), bilayer (PSB) and pillar (PSP) structures have been evaluated as nucleation centers for vanadium pentoxide (V2O5) crystals. Deposition of vanadium precursor over different substrates (drop casting technique), followed by annealing treatment under Ar-H-2 (5% H-2) atmosphere, induced crystallization of vanadium oxide. With respect to c-Si/SiO2 substrate, V2O5 nanorods with relatively large aspect ratio were formed over and within PSP structures. On the other hand, pores in PSM and PSB were found to be filled with relatively smaller crystals. Additionally, PSB provided a nucleation substrate capable to align the nanocrystals in a preferential orientation, while V2O5 crystals grown on PSP were found to be randomly aligned around the nanoporous pillar microstructure. Nanorods and nanocrystals were identified as V2O5 by temperature-controlled XRD measurements and evidence of their crystalline nature was observed via transmission electron microscopy. A careful analysis of electronic microscopy images allows the identification of the facets composing the ends of the crystals and its corresponding surface free energy has been evaluated employing the Wulff theorem. Such high surface area composite structures have potential applications as cathode material in Lithium-ion batteries. KW - Porous silicon KW - Vanadium pentoxide KW - Nanorods KW - Crystallization KW - Nanostructures Y1 - 2017 U6 - https://doi.org/10.1016/j.ceramint.2017.03.114 SN - 0272-8842 SN - 1873-3956 VL - 43 SP - 8023 EP - 8030 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Zhang, Shuhao A1 - Bisterfeld, Carolin A1 - Bramski, Julia A1 - Vanparijs, Nane A1 - De Geest, Bruno G. A1 - Pietruszka, Jörg A1 - Böker, Alexander A1 - Reinicke, Stefan T1 - Biocatalytically Active Thin Films via Self-Assembly of 2-Deoxy-D-ribose-5-phosphate Aldolase-Poly(N-isopropylacrylamide) Conjugates JF - Bioconjugate chemistry N2 - 2-Deoxy-D-ribose-5-phosphate aldolase (DERA) is a biocatalyst that is capable of converting acetaldehyde and a second aldehyde as acceptor into enantiomerically pure mono- and diyhydroxyaldehydes, which are important structural motifs in a number of pharmaceutically active compounds. However, substrate as well as product inhibition requires a more-sophisticated process design for the synthesis of these motifs. One way to do so is to the couple aldehyde conversion with transport processes, which, in turn, would require an immobilization of the enzyme within a thin film that can be deposited on a membrane support. Consequently, we developed a fabrication process for such films that is based on the formation of DERA-poly(N-isopropylacrylamide) conjugates that are subsequently allowed to self-assemble at an air-water interface to yield the respective film. In this contribution, we discuss the conjugation conditions, investigate the interfacial properties of the conjugates, and, finally, demonstrate a successful film formation under the preservation of enzymatic activity. Y1 - 2017 U6 - https://doi.org/10.1021/acs.bioconjchem.7b00645 SN - 1043-1802 VL - 29 IS - 1 SP - 104 EP - 116 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Rumschöttel, Jens A1 - Baus, Susann A1 - Kosmella, Sabine A1 - Appelhans, Dietmar A1 - Koetz, Joachim T1 - Incorporation of DNA/PEI polyplexes into gelatin/chitosan hydrogel scaffolds BT - a mu-DSC study JF - Composite interfaces N2 - Polyplexes between a double-stranded Salmon DNA and hyperbranched poly(ethyleneimine) (PEI) as well as a maltosylated PEI-Mal were incorporated into a gelatin/chitosan hydrogel scaffold. Calorimetric experiments of the polyplexes show a decrease of the melting temperature in presence of PEI and a peak splitting in presence of PEI-Mal, which can be interpreted to a partial compaction of the DNA strands in presence of PEI-Mal. When the polyplexes are incorporated into a gelatin/chitosan scaffold in the swollen state, the DNA melting peaks at 90 and 93 degrees C, respectively, indicate in both cases the release of the DNA at the surface of the hydrogel scaffold in a more compact form. Specific interactions between the PEI-Mal shell and gelatin are responsible for the tuning of the release properties in presence of the maltose units in the hyperbranched PEI. KW - DNA-PEI polyplexes KW - maltosylated poly(ethyleneimine) KW - mu-DSC KW - DNA release KW - gelatin/chitosan hydrogel scaffold Y1 - 2017 U6 - https://doi.org/10.1080/09276440.2017.1302725 SN - 1568-5543 VL - 25 IS - 1 SP - 1 EP - 11 PB - Routledge, Taylor & Francis Group CY - Abingdon ER - TY - JOUR A1 - Thirumalaikumar, Venkatesh P. A1 - Devkar, Vikas A1 - Mehterov, Nikolay A1 - Ali, Shawkat A1 - Ozgur, Rengin A1 - Turkan, Ismail A1 - Müller-Röber, Bernd A1 - Balazadeh, Salma T1 - NAC transcription factor JUNGBRUNNEN1 enhances drought tolerance in tomato JF - Plant Biotechnology Journal N2 - Water deficit (drought stress) massively restricts plant growth and the yield of crops; reducing the deleterious effects of drought is therefore of high agricultural relevance. Drought triggers diverse cellular processes including the inhibition of photosynthesis, the accumulation of cell-damaging reactive oxygen species and gene expression reprogramming, besides others. Transcription factors (TF) are central regulators of transcriptional reprogramming and expression of many TF genes is affected by drought, including members of the NAC family. Here, we identify the NAC factor JUNGBRUNNEN1 (JUB1) as a regulator of drought tolerance in tomato (Solanum lycopersicum). Expression of tomato JUB1 (SlJUB1) is enhanced by various abiotic stresses, including drought. Inhibiting SlJUB1 by virus-induced gene silencing drastically lowers drought tolerance concomitant with an increase in ion leakage, an elevation of hydrogen peroxide (H2O2) levels and a decrease in the expression of various drought-responsive genes. In contrast, overexpression of AtJUB1 from Arabidopsis thaliana increases drought tolerance in tomato, alongside with a higher relative leaf water content during drought and reduced H2O2 levels. AtJUB1 was previously shown to stimulate expression of DREB2A, a TF involved in drought responses, and of the DELLA genes GAI and RGL1. We show here that SlJUB1 similarly controls the expression of the tomato orthologs SlDREB1, SlDREB2 and SlDELLA. Furthermore, AtJUB1 directly binds to the promoters of SlDREB1, SlDREB2 and SlDELLA in tomato. Our study highlights JUB1 as a transcriptional regulator of drought tolerance and suggests considerable conservation of the abiotic stress-related gene regulatory networks controlled by this NAC factor between Arabidopsis and tomato. KW - Arabidopsis KW - tomato KW - transcription factor KW - drought KW - reactive oxygen species KW - DELLA Y1 - 2017 U6 - https://doi.org/10.1111/pbi.12776 SN - 1467-7644 SN - 1467-7652 VL - 16 IS - 2 SP - 354 EP - 366 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Sprenger, Heike A1 - Erban, Alexander A1 - Seddig, Sylvia A1 - Rudack, Katharina A1 - Thalhammer, Anja A1 - Le, Mai Q. A1 - Walther, Dirk A1 - Zuther, Ellen A1 - Koehl, Karin I. A1 - Kopka, Joachim A1 - Hincha, Dirk K. T1 - Metabolite and transcript markers for the prediction of potato drought tolerance JF - Plant Biotechnology Journal N2 - Potato (Solanum tuberosum L.) is one of the most important food crops worldwide. Current potato varieties are highly susceptible to drought stress. In view of global climate change, selection of cultivars with improved drought tolerance and high yield potential is of paramount importance. Drought tolerance breeding of potato is currently based on direct selection according to yield and phenotypic traits and requires multiple trials under drought conditions. Marker-assisted selection (MAS) is cheaper, faster and reduces classification errors caused by noncontrolled environmental effects. We analysed 31 potato cultivars grown under optimal and reduced water supply in six independent field trials. Drought tolerance was determined as tuber starch yield. Leaf samples from young plants were screened for preselected transcript and nontargeted metabolite abundance using qRT-PCR and GC-MS profiling, respectively. Transcript marker candidates were selected from a published RNA-Seq data set. A Random Forest machine learning approach extracted metabolite and transcript markers for drought tolerance prediction with low error rates of 6% and 9%, respectively. Moreover, by combining transcript and metabolite markers, the prediction error was reduced to 4.3%. Feature selection from Random Forest models allowed model minimization, yielding a minimal combination of only 20 metabolite and transcript markers that were successfully tested for their reproducibility in 16 independent agronomic field trials. We demonstrate that a minimum combination of transcript and metabolite markers sampled at early cultivation stages predicts potato yield stability under drought largely independent of seasonal and regional agronomic conditions. KW - drought tolerance KW - machine learning KW - metabolite markers KW - potato (Solanum tuberosum) KW - prediction models KW - transcript markers Y1 - 2017 U6 - https://doi.org/10.1111/pbi.12840 SN - 1467-7644 SN - 1467-7652 VL - 16 IS - 4 SP - 939 EP - 950 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Haber-Pohlmeier, Sabina A1 - Tötzke, Christian A1 - Oswald, Sascha A1 - Lehmann, Eberhard A1 - Blümich, Bernhard A1 - Pohlmeier, Andreas T1 - Imaging of root zone processes using MRI T-1 mapping JF - Microporous and mesoporous materials : zeolites, clays, carbons and related materials N2 - Noninvasive imaging in the root soil compartment is mandatory for improving knowledge about root soil interactions and uptake processes which eventually control crop growth and productivity. Here we propose a method of MRI T-1 relaxation mapping to investigate water uptake patterns, and as second example, in combination with neutron tomography (NT), property changes in the rhizosphere. The first part demonstrates quantification of solute enrichment by advective transport to the roots due to water uptake. This accumulation is counterbalanced by net downward flow and dispersive spreading. One can furthermore discriminate between zones of high accumulation patterns and zones with much less enrichment. This behavior persists over days. The second part presents the novel combination of MRI with neutron tomography to couple static, proton density information of roots and their interface to the surrounding soil with information about the local water dynamics, reflected by NMR relaxation times. The root soil interface of a broad bean plant is characterized by slightly increasing MRI and NT signal intensity but decreasing T-1 relaxation time indicating locally changed soil properties. KW - Low field MRI KW - Neutron tomography KW - Root zone processes KW - Solute transport KW - Quantification of contrast agent KW - T1 mapping Y1 - 2017 U6 - https://doi.org/10.1016/j.micromeso.2017.10.046 SN - 1387-1811 SN - 1873-3093 VL - 269 SP - 43 EP - 46 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Zühlke, Martin A1 - Sass, Stephan A1 - Riebe, Daniel A1 - Beitz, Toralf A1 - Löhmannsröben, Hans-Gerd T1 - Real-Time Reaction Monitoring of an Organic Multistep Reaction by Electrospray Ionization-Ion Mobility Spectrometry JF - ChemPlusChem N2 - The capability of electrospray ionization (ESI)-ion mobility (IM) spectrometry for reaction monitoring is assessed both as a stand-alone real-time technique and in combination with HPLC. A three-step chemical reaction, consisting of a Williamson ether synthesis followed by a hydrogenation and an N-alkylation step, is chosen for demonstration. Intermediates and products are determined with a drift time to mass-per-charge correlation. Addition of an HPLC column to the setup increases the separation power and allows the determination of further species. Monitoring of the intensities of the various species over the reaction time allows the detection of the end of reaction, determination of the rate-limiting step, observation of the system response in discontinuous processes, and optimization of the mass ratios of the starting materials. However, charge competition in ESI influences the quantitative detection of substances in the reaction mixture. Therefore, two different methods are investigated, which allow the quantification and investigation of reaction kinetics. The first method is based on the pre-separation of the compounds on an HPLC column and their subsequent individual detection in the ESI-IM spectrometer. The second method involves an extended calibration procedure, which considers charge competition effects and facilitates nearly real-time quantification. KW - electrospray ionization KW - HPLC KW - ion mobility spectrometry KW - reaction mechanisms KW - reaction monitoring Y1 - 2017 U6 - https://doi.org/10.1002/cplu.201700296 SN - 2192-6506 VL - 82 SP - 1266 EP - 1273 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Unuabonah, Emmanuel Iyayi A1 - Agunbiade, Foluso O. A1 - Alfred, Moses O. A1 - Adewumi, Thompson A. A1 - Okoli, Chukwunonso P. A1 - Omorogie, Martins O. A1 - Akanbi, Moses O. A1 - Ofomaja, Augustine E. A1 - Taubert, Andreas T1 - Facile synthesis of new amino-functionalized agrogenic hybrid composite clay adsorbents for phosphate capture and recovery from water JF - Journal of Cleaner Production N2 - New hybrid clay materials with good affinity for phosphate ions were developed from a combination of biomass-Carica papaya seeds (PS) and Musa paradisiaca (Plantain peels-PP), ZnCl2 and Kaolinite clay to produce iPS-HYCA and iPP-HYCA composite adsorbents respectively. Functionalization of these adsorbents with an organosilane produced NPS-HYCA and NPP-HYCA composite adsorbents. The pH(pzc) for the adsorbents were 7.83, 6.91, 7.66 and 6.55 for iPS-HYCA, NPS-HYCA, iPP-HYCA and NPP-HYCA respectively. Using the Brouer-Sotolongo isotherm model which best predict the adsorption capacity of composites for phosphate, iPP-HYCA, iPS-HYCA, NPP-HYCA, and NPS-HYCA composite adsorbents respectively. When compared with some commercial resins, the amino-functionalized adsorbents had better adsorption capacities. Furthermore, amino-functionalized adsorbents showed improved adsorption capacity and rate of phosphate uptake (as much as 40-fold), as well as retain 94% (for NPS-HYCA) and 84.1% (for NPP-HYCA) efficiency for phosphate adsorption after 5 adsorption-desorption cycles (96 h of adsorption time with 100 mg/L of phosphate ions) as against 37.5% (for iPS-HYCA) and 35% (for iPP-HYCA) under similar conditions. In 25 min desorption of phosphate ion attained equilibrium. These new amino-functionalized hybrid clay composite adsorbents, which were prepared by a simple means that is sustainable, have potentials for the efficient capture of phosphate ions from aqueous solution. They are quickly recovered from aqueous solution, non-biodegradable (unlike many biosorbent) with potentials to replace expensive adsorbents in the future. They have the further advantage of being useful in the recovery of phosphate for use in agriculture which could positively impact the global food security programme. (C) 2017 Elsevier Ltd. All rights reserved. KW - Composite adsorbents KW - Sustainable KW - Phosphate recovery KW - Water KW - Desorption kinetics Y1 - 2017 U6 - https://doi.org/10.1016/j.jclepro.2017.06.160 SN - 0959-6526 SN - 1879-1786 VL - 164 SP - 652 EP - 663 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Hu, Shuangyan A1 - Zhao, Junpeng A1 - Zhang, Guangzhao A1 - Schlaad, Helmut T1 - Macromolecular architectures through organocatalysis JF - Progress in Polymer Science N2 - In virtue of the rising demand for metal-free polymeric materials, organocatalytic polymerization has emerged and blossomed unprecedentedly in the past 15 years into an appealing research area and a powerful arsenal for polymer synthesis. In addition to the inherent merits as being metal-free, small molecule organocatalysts have also provided opportunities to develop alternative and, in many cases, more expedient synthetic approaches toward macromolecular architectures, that play a crucial role in shaping the properties of the obtained polymers. A majority of preliminary studies exploring for new catalysts, catalytic mechanisms and optimized polymerization conditions are extended to application of the catalytic systems on rational design and controlled synthesis of various macromolecular architectures. Such endeavors are described in this review, categorized by the architectural elements including chain structure (types, sequence and composition of monomeric units constituting the polymer chains), topological structure (the fashion different polymer chains are covalently attached to each other within the macromolecule) and functionality (position and amount of functional groups that endow the entire macromolecule with specific chemical, physico-chemical or biological properties). (C) 2017 Published by Elsevier B.V. KW - Organocatalytic polymerization KW - Metal-free polymerization KW - Macromolecular architecture KW - Controlled polymer synthesis Y1 - 2017 U6 - https://doi.org/10.1016/j.progpolymsci.2017.07.002 SN - 0079-6700 SN - 1873-1619 VL - 74 SP - 34 EP - 77 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Bauch, Marcel A1 - Klaper, Matthias A1 - Linker, Torsten T1 - Intermediates in the cleavage of endoperoxides JF - Journal of physical organic chemistry N2 - The decomposition of anthracene endoperoxides has been investigated under various conditions. Thermolyses proceed via radical intermediates and afford anthracenes and rearrangement products, depending on the substitution pattern. Interestingly, not only the O-O but also the C-O bond can be cleaved homolytically. Under basic conditions fragmentations take place, affording anthraquinone, and reactive oxygen species. This mechanism explains the often observed decomposition of endoperoxides during work-up. Finally, an acid-catalyzed cleavage has been observed under release of hydrogen peroxide. The results should be interesting for the mechanistic understanding of peroxide decomposition and the endoperoxides might serve as mild sources of reactive oxygen species for future applications. Copyright (C) 2016 John Wiley & Sons, Ltd. KW - peroxides KW - radicals KW - reaction mechanism KW - reactive intermediates Y1 - 2017 U6 - https://doi.org/10.1002/poc.3607 SN - 0894-3230 SN - 1099-1395 VL - 30 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Michalik-Onichimowska, Aleksandra A1 - Kern, Simon A1 - Riedel, Jens A1 - Panne, Ulrich A1 - King, Rudibert A1 - Maiwald, Michael T1 - "Click" analytics for "click" chemistry - A simple method for calibration-free evaluation of online NMR spectra JF - Journal of magnetic resonance N2 - Driven mostly by the search for chemical syntheses under biocompatible conditions, so called "click" chemistry rapidly became a growing field of research. The resulting simple one-pot reactions are so far only scarcely accompanied by an adequate optimization via comparably straightforward and robust analysis techniques possessing short set-up times. Here, we report on a fast and reliable calibration-free online NMR monitoring approach for technical mixtures. It combines a versatile fluidic system, continuous-flow measurement of H-1 spectra with a time interval of 20 s per spectrum, and a robust, fully automated algorithm to interpret the obtained data. As a proof-of-concept, the thiol-ene coupling between N-boc cysteine methyl ester and ally] alcohol was conducted in a variety of non-deuterated solvents while its time-resolved behaviour was characterized with step tracer experiments. Overlapping signals in online spectra during thiol-ene coupling could be deconvoluted with a spectral model using indirect hard modeling and were subsequently converted to either molar ratios (using a calibration free approach) or absolute concentrations (using 1-point calibration). For various solvents the kinetic constant k for pseudo-first order reaction was estimated to be 3.9 h(-1) at 25 degrees C. The obtained results were compared with direct integration of non-overlapping signals and showed good agreement with the implemented mass balance. (C) 2017 Elsevier Inc. All rights reserved. KW - NMR spectroscopy KW - Reaction monitoring KW - Automated data evaluation KW - Thiol-ene click chemistry Y1 - 2017 U6 - https://doi.org/10.1016/j.jmr.2017.02.018 SN - 1090-7807 SN - 1096-0856 VL - 277 SP - 154 EP - 161 PB - Elsevier CY - San Diego ER - TY - JOUR A1 - Dippong, Martin A1 - Carl, Peter A1 - Lenz, Christine A1 - Schenk, Jörg A. A1 - Hoffmann, Katrin A1 - Schwaar, Timm A1 - Schneider, Rudolf J. A1 - Kuhne, Maren T1 - Hapten-Specific Single-Cell Selection of Hybridoma Clones by Fluorescence-Activated Cell Sorting for the Generation of Monoclonal Antibodies JF - Analytical chemistry Y1 - 2017 U6 - https://doi.org/10.1021/acs.analchem.6b04569 SN - 0003-2700 SN - 1520-6882 VL - 89 SP - 4007 EP - 4012 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Movahedifar, Fahimeh A1 - Modarresi-Alam, Ali Reza A1 - Kleinpeter, Erich A1 - Schilde, Uwe T1 - Dynamic H-1-NMR study of unusually high barrier to rotation about the partial C-N double bond in N,N-dimethyl carbamoyl 5-aryloxytetrazoles JF - Journal of molecular structure N2 - The synthesis of new N,N-dimethyl carbamoyl 5-aryloxytetrazoles have been reported. Their dynamic H-1-NMR via rotation about C-N bonds in moiety of urea group [a; CO-NMe2 and b; (2-tetrazolyl)N-CO rotations] in the solvents CDCl3 (223-333 K) and DMSO (298-363 K) is studied. Accordingly, the free energies of activation, obtained 16.5 and 16.9 kcal mol(-1) respectively, attributed to the conformational isomerization about the Me2N-C=O bond (a rotation). Moreover, a and b barrier to rotations in 5-((4-methylphenoxy)-N,N-dimethyl-2H-tetrazole-2-carboxamide (P) also were computed at level of B3LYP using 6-311++G** basis set. The optimized geometry parameters are in good agreement with X-ray structure data. The computation of energy barrier for a and b was determined 16.9 and 2.5 kcal mol(-1), respectively. The former is completely in agreement with the result obtained via dynamic NMR. X-ray structure analysis data demonstrate that just 2-acylated tetrazole was formed in the case of 5-(p-tolyloxy)-N,N-dimethyl-2H-tetrazole-2-carboxamide. X-ray data also revealed a planar trigonal orientation of the Me2N group which is coplanar to carbonyl group with the partial double-bond C-N character. It also demonstrates the synperiplanar position of C=O group with tetrazolyl ring. On average, in solution the plane containing carbonyl bond is almost perpendicular to the plane of the tetrazolyl ring (because of steric effects as confirmed by B3LY12/6-311++G**) while the plane containing Me2N group is coplanar with carbonyl bond which is in contrast with similar urea derivatives and it demonstrates the unusually high rotational energy barrier of these compounds. (C) 2016 Elsevier B.V. All rights reserved. KW - Dynamic H-1-NMR KW - Carbamoyl tetrazoles KW - Barrier to rotation about C-N bond KW - pi-Stacking KW - B3LYP/6-311++G** Y1 - 2017 U6 - https://doi.org/10.1016/j.molstruc.2016.12.010 SN - 0022-2860 SN - 1872-8014 VL - 1133 SP - 244 EP - 252 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Mondal, Suvendu Sekhar A1 - Dey, Subarna A1 - Attallah, Ahmed G. A1 - Krause-Rehberg, Reinhard A1 - Janiak, Christoph A1 - Holdt, Hans-Jürgen T1 - Insights into the pores of microwave-assisted metal-imidazolate frameworks showing enhanced gas sorption JF - Dalton transactions : a journal of inorganic chemistry, including bioinorganic, organometallic, and solid-state chemistry N2 - Microwave heating (MW)-assisted synthesis has been widely applied as an alternative method for the chemical synthesis of organic and inorganic materials. In this work, we report MW-assisted synthesis of three isostructural 3D frameworks with a flexible linker arm of the chelating linker 2-substituted imidazolate- 4-amide-5-imidate, named IFP-7-MW (M = Zn, R = OMe), IFP-8-MW (M = Co; R = OMe) and IFP-10-MW (M = Co; R = OEt) (IFP = Imidazolate Framework Potsdam). These chelating ligands were generated in situ by partial hydrolysis of 2-substituted 4,5-dicyanoimidazoles under MW-and also conventional electrical heating (CE)-assisted conditions in DMF. The structure of these materials was determined by IR spectroscopy and powder X-ray diffraction (PXRD) and the identity of the materials synthesized under CE-conditions was established. Materials obtained from MW-heating show many fold enhancement of CO2 and H-2 uptake capacities, compared to the analogous CE-heating method based materials. To understand the inner pore-sizes of IFP structures and variations of gas sorptions, we performed positron annihilation lifetime spectroscopy (PALS), which shows that MW-assisted materials have smaller pore sizes than materials synthesized under CE-conditions. The "kinetically controlled" MW-synthesized material has an inherent ability to trap extra linkers, thereby reducing the pore sizes of CE-materials to ultra/micropores. These ultramicropores are responsible for high gas sorption. Y1 - 2017 U6 - https://doi.org/10.1039/c7dt00350a SN - 1477-9226 SN - 1477-9234 VL - 46 SP - 4824 EP - 4833 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Charan, Himanshu A1 - Glebe, Ulrich A1 - Anand, Deepak A1 - Kinzel, Julia A1 - Zhu, Leilei A1 - Bocola, Marco A1 - Garakani, Tayebeh Mirzaei A1 - Schwaneberg, Ulrich A1 - Böker, Alexander T1 - Nano-thin walled micro-compartments from transmembrane protein-polymer conjugates JF - Soft matter N2 - The high interfacial activity of protein-polymer conjugates has inspired their use as stabilizers for Pickering emulsions, resulting in many interesting applications such as synthesis of templated micro-compartments and protocells or vehicles for drug and gene delivery. In this study we report, for the first time, the stabilization of Pickering emulsions with conjugates of a genetically modified transmembrane protein, ferric hydroxamate uptake protein component A (FhuA). The lysine residues of FhuA with open pore (FhuA Delta CVFtev) were modified to attach an initiator and consequently controlled radical polymerization (CRP) carried out via the grafting-from technique. The resulting conjugates of FhuA Delta CVFtev with poly(N-isopropylacrylamide) (PNIPAAm) and poly((2-dimethylamino) ethyl methacrylate) (PDMAEMA), the so-called building blocks based on transmembrane proteins (BBTP), have been shown to engender larger structures. The properties such as pH-responsivity, temperature-responsivity and interfacial activity of the BBTP were analyzed using UV-Vis spectrophotometry and pendant drop tensiometry. The BBTP were then utilized for the synthesis of highly stable Pickering emulsions, which could remain non-coalesced for well over a month. A new UV-crosslinkable monomer was synthesized and copolymerized with NIPAAm from the protein. The emulsion droplets, upon crosslinking of polymer chains, yielded micro-compartments. Fluorescence microscopy proved that these compartments are of micrometer scale, while cryo-scanning electron microscopy and scanning force microscopy analysis yielded a thickness in the range of 11.1 +/- 0.6 to 38.0 +/- 18.2 nm for the stabilizing layer of the conjugates. Such micro-compartments would prove to be beneficial in drug delivery applications, owing to the possibility of using the channel of the transmembrane protein as a gate and the smart polymer chains as trigger switches to tune the behavior of the capsules. Y1 - 2017 U6 - https://doi.org/10.1039/c6sm02520j SN - 1744-683X SN - 1744-6848 VL - 13 SP - 2866 EP - 2875 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Schmidt, Bernd A1 - Wolf, Felix T1 - Synthesis of Phenylpropanoids via Matsuda-Heck Coupling of Arene Diazonium Salts JF - The journal of organic chemistry N2 - The Pd-catalyzed Heck-type coupling (Matsuda Heck reaction) of electron rich arene diazonium salts with electron deficient olefins has been exploited for the synthesis of phenylpropanoid natural products. Examples described herein are the naturally occurring benzofurans methyl wutaifuranate, wutaifuranol, wutaifuranal, their 7-methoxy derivatives, and the O-prenylated natural products boropinols A and C. Y1 - 2017 U6 - https://doi.org/10.1021/acs.joc.7b00447 SN - 0022-3263 VL - 82 SP - 4386 EP - 4395 PB - American Chemical Society CY - Washington ER -