TY - JOUR A1 - de Carvalho, Sidney J. A1 - Metzler, Ralf A1 - Cherstvy, Andrey G. T1 - Critical adsorption of polyelectrolytes onto planar and convex highly charged surfaces BT - the nonlinear Poisson–Boltzmann approach JF - New journal of physics : the open-access journal for physics N2 - We study the adsorption–desorption transition of polyelectrolyte chains onto planar, cylindrical and spherical surfaces with arbitrarily high surface charge densities by massive Monte Carlo computer simulations. We examine in detail how the well known scaling relations for the threshold transition—demarcating the adsorbed and desorbed domains of a polyelectrolyte near weakly charged surfaces—are altered for highly charged interfaces. In virtue of high surface potentials and large surface charge densities, the Debye–Hückel approximation is often not feasible and the nonlinear Poisson–Boltzmann approach should be implemented. At low salt conditions, for instance, the electrostatic potential from the nonlinear Poisson–Boltzmann equation is smaller than the Debye–Hückel result, such that the required critical surface charge density for polyelectrolyte adsorption σc increases. The nonlinear relation between the surface charge density and electrostatic potential leads to a sharply increasing critical surface charge density with growing ionic strength, imposing an additional limit to the critical salt concentration above which no polyelectrolyte adsorption occurs at all. We contrast our simulations findings with the known scaling results for weak critical polyelectrolyte adsorption onto oppositely charged surfaces for the three standard geometries. Finally, we discuss some applications of our results for some physical–chemical and biophysical systems. KW - polyelectrolyte adsorption KW - electrostatic interactions KW - critical phenomena KW - Debye screening Y1 - 2016 U6 - https://doi.org/10.1088/1367-2630/18/8/083037 SN - 1367-2630 VL - 18 PB - IOP Publ. CY - London ER - TY - THES A1 - Bolger, Anthony T1 - Sequencing the Genome of the stress-tolerant wild tomato Solanum pennellii and Novel Algorithms motivated thereby Y1 - 2016 ER - TY - BOOK A1 - Barth-Weingarten, Dagmar T1 - Intonation Units Revisited BT - cesuras in talk-in-interaction T3 - Studies in Language and Social Interaction ; 29 N2 - Intonation units have been notoriously difficult to identify in natural talk. Problems include fuzzy boundaries, lack of exhaustivity, and the potential circularity involved when studying their interface with other language-organizational dimensions. This volume advocates a way to resolve such problems: the cesura approach. Cesuras, or breaks in the flow of talk, are created by discontinuities in the prosodic-phonetic parameters of speech that cluster to various extents at certain points in time. Using conversation-analytic and interactional-linguistic methodology, the volume identifies the parameters creating cesuras in talk-in-interaction and proposes ways to notate them depending on the researcher s goal. It also offers a way to study the role of cesuras at the prosody-syntax interface non-circularly, which leads to new insights concerning language variation and change. The volume will thus be of major import to anyone working with natural spoken language, its chunks, its various dimensions, and its variation and change." Y1 - 2016 SN - 978-90-272-6690-3 SN - 978-90-272-2639-6 PB - John Benjamins Publishing Company CY - Amsterdam ER - TY - THES A1 - Zhu, Fangjun T1 - Gene evolution and expression patterns in the all-female fish Amazon molly: Poecilia formosa Y1 - 2016 ER - TY - THES A1 - Dotzek, Jana T1 - Mitochondria in the genus Oenothera - Non-Mendelian inheritance patterns, in vitro structure and evolutionary dynamics Y1 - 2016 ER - TY - THES A1 - Sas, Claudia T1 - Evolution of the selfing syndrome in the genus capsella BT - an investigation into floral UV absorption and scent emission Y1 - 2016 ER - TY - JOUR A1 - Reppert, Alexander von A1 - Puddell, J. A1 - Koc, A. A1 - Reinhardt, M. A1 - Leitenberger, Wolfram A1 - Dumesnil, K. A1 - Zamponi, Flavio A1 - Bargheer, Matias T1 - Persistent nonequilibrium dynamics of the thermal energies in the spin and phonon systems of an antiferromagnet JF - Structural dynamics N2 - We present a temperature and fluence dependent Ultrafast X-Ray Diffraction study of a laser-heated antiferromagnetic dysprosium thin film. The loss of antiferromagnetic order is evidenced by a pronounced lattice contraction. We devise a method to determine the energy flow between the phonon and spin system from calibrated Bragg peak positions in thermal equilibrium. Reestablishing the magnetic order is much slower than the cooling of the lattice, especially around the Néel temperature. Despite the pronounced magnetostriction, the transfer of energy from the spin system to the phonons in Dy is slow after the spin-order is lost. Y1 - 2016 U6 - https://doi.org/10.1063/1.4961253 SN - 2329-7778 VL - 3 PB - AIP Publishing LLC CY - Melville, NY ER - TY - THES A1 - Kloß, Lena T1 - The link between genetic diversity and species diversity BT - patterns and processes in plants of agriculturally managed grassland Y1 - 2016 ER - TY - THES A1 - Hoffmann, Stefan T1 - In vivo Selection of Switchable DNA-Binding Proteins Y1 - 2016 ER - TY - THES A1 - Zhang, Youjun T1 - Investigation of the TCA cycle and glycolytic metabolons and their physiological impacts in plants Y1 - 2016 ER - TY - BOOK A1 - Gil, Thomas T1 - Causes, Time, and Truth N2 - We need causation, time, and truth in order to know how things in the broadest sense of the term hang together in the broadest sense of the term. The essays try to say something clarifying about those three classical questions of traditional metaphysics. Not dogmatic answers are offered, but guiding perspectives and possible justifiable ways of dealing with such fundamental Y1 - 2016 SN - 978-3-945878-23-1 PB - WeltTrends CY - Potsdam ER - TY - THES A1 - Löwenberg, Candy T1 - Shape-memory effect of gelatin-based hydrogels Y1 - 2016 ER - TY - THES A1 - Klauschies, Toni T1 - Revealing causes and consequences of functional diversity using trait-based models Y1 - 2016 ER - TY - THES A1 - Stief, Anna T1 - Genetics and ecology of plant heat stress memory Y1 - 2016 ER - TY - THES A1 - Schumacher, Reinhard T1 - Adam Smith, foreign trade and economic development BT - essays in historiographic revision Y1 - 2016 ER - TY - THES A1 - Al-Saffar, Loay Talib Ahmed T1 - Analysing prerequisites, expectations, apprehensions, and attitudes of University students studying computer science Y1 - 2016 ER - TY - THES A1 - Beltran, Juan Camilo Moreno T1 - Characterization of the Clp protease complex and identification of putative substrates in N. tabacum Y1 - 2016 ER - TY - JOUR A1 - Thieken, Annegret A1 - Bessel, Tina A1 - Kienzler, Sarah A1 - Kreibich, Heidi A1 - Müller, Meike A1 - Pisi, Sebastian A1 - Schröter, Kai T1 - The flood of June 2013 in Germany BT - how much do we know about its impacts? JF - National Hazards Earth System Science N2 - In June 2013, widespread flooding and consequent damage and losses occurred in Central Europe, especially in Germany. This paper explores what data are available to investigate the adverse impacts of the event, what kind of information can be retrieved from these data and how well data and information fulfil requirements that were recently proposed for disaster reporting on the European and international levels. In accordance with the European Floods Directive (2007/60/EC), impacts on human health, economic activities (and assets), cultural heritage and the environment are described on the national and sub-national scale. Information from governmental reports is complemented by communications on traffic disruptions and surveys of flood-affected residents and companies. Overall, the impacts of the flood event in 2013 were manifold. The study reveals that flood-affected residents suffered from a large range of impacts, among which mental health and supply problems were perceived more seriously than financial losses. The most frequent damage type among affected companies was business interruption. This demonstrates that the current scientific focus on direct (financial) damage is insufficient to describe the overall impacts and severity of flood events. The case further demonstrates that procedures and standards for impact data collection in Germany are widely missing. Present impact data in Germany are fragmentary, heterogeneous, incomplete and difficult to access. In order to fulfil, for example, the monitoring and reporting requirements of the Sendai Framework for Disaster Risk Reduction 2015–2030 that was adopted in March 2015 in Sendai, Japan, more efforts on impact data collection are needed. Y1 - 2016 U6 - https://doi.org/10.5194/nhess-16-1519-2016 IS - 16 SP - 1519 EP - 1540 PB - Copernicus Publications CY - Göttingen ER - TY - JOUR A1 - Bodrova, Anna S. A1 - Chechkin, Aleksei V. A1 - Cherstvy, Andrey G. A1 - Safdari, Hadiseh A1 - Sokolov, Igor M. A1 - Metzler, Ralf T1 - Underdamped scaled Brownian motion BT - (non-)existence of the overdamped limit in anomalous diffusion JF - Scientific reports N2 - It is quite generally assumed that the overdamped Langevin equation provides a quantitative description of the dynamics of a classical Brownian particle in the long time limit. We establish and investigate a paradigm anomalous diffusion process governed by an underdamped Langevin equation with an explicit time dependence of the system temperature and thus the diffusion and damping coefficients. We show that for this underdamped scaled Brownian motion (UDSBM) the overdamped limit fails to describe the long time behaviour of the system and may practically even not exist at all for a certain range of the parameter values. Thus persistent inertial effects play a non-negligible role even at significantly long times. From this study a general questions on the applicability of the overdamped limit to describe the long time motion of an anomalously diffusing particle arises, with profound consequences for the relevance of overdamped anomalous diffusion models. We elucidate our results in view of analytical and simulations results for the anomalous diffusion of particles in free cooling granular gases. Y1 - 2016 U6 - https://doi.org/10.1038/srep30520 SN - 2045-2322 VL - 6 PB - Nature Publishing Group CY - London ER - TY - THES A1 - Oliveira, Joana Santos Lapa T1 - Role of different ceramides on the nanostructure of Stratum Corneum models and the influence of selected penetration enhancers Y1 - 2016 ER - TY - JOUR A1 - Schwanghart, Wolfgang A1 - Worni, Raphael A1 - Huggel, Christian A1 - Stoffel, Markus A1 - Korup, Oliver T1 - Uncertainty in the Himalayan energy–water nexus BT - estimating regional exposure to glacial lake outburst floods JF - Environmental research letters : ERL N2 - Himalayan water resources attract a rapidly growing number of hydroelectric power projects (HPP) to satisfy Asia's soaring energy demands. Yet HPP operating or planned in steep, glacier-fed mountain rivers face hazards of glacial lake outburst floods (GLOFs) that can damage hydropower infrastructure, alter water and sediment yields, and compromise livelihoods downstream. Detailed appraisals of such GLOF hazards are limited to case studies, however, and a more comprehensive, systematic analysis remains elusive. To this end we estimate the regional exposure of 257 Himalayan HPP to GLOFs, using a flood-wave propagation model fed by Monte Carlo-derived outburst volumes of >2300 glacial lakes. We interpret the spread of thus modeled peak discharges as a predictive uncertainty that arises mainly from outburst volumes and dam-breach rates that are difficult to assess before dams fail. With 66% of sampled HPP are on potential GLOF tracks, up to one third of these HPP could experience GLOF discharges well above local design floods, as hydropower development continues to seek higher sites closer to glacial lakes. We compute that this systematic push of HPP into headwaters effectively doubles the uncertainty about GLOF peak discharge in these locations. Peak discharges farther downstream, in contrast, are easier to predict because GLOF waves attenuate rapidly. Considering this systematic pattern of regional GLOF exposure might aid the site selection of future Himalayan HPP. Our method can augment, and help to regularly update, current hazard assessments, given that global warming is likely changing the number and size of Himalayan meltwater lakes. KW - Himalayas KW - glacial hazards KW - glacial lake outburst floods KW - hydropower KW - water resources Y1 - 2016 U6 - https://doi.org/10.1088/1748-9326/11/7/074005 SN - 1748-9326 VL - 11 PB - IOP Publ. CY - Bristol ER - TY - JOUR A1 - Zhu, Fangjun A1 - Schlupp, Ingo A1 - Tiedemann, Ralph T1 - Sequence Evolution and Expression of the Androgen Receptor and Other Pathway-Related Genes in a Unisexual Fish, the Amazon Molly, Poecilia formosa, and Its Bisexual Ancestors JF - PLoS one N2 - The all-female Amazon molly (Poecilia formosa) originated from a single hybridization of two bisexual ancestors, Atlantic molly (Poecilia mexicana) and sailfin molly (Poecilia latipinna). As a gynogenetic species, the Amazon molly needs to copulate with a heterospecific male, but the genetic information of the sperm-donor does not contribute to the next generation, as the sperm only acts as the trigger for the diploid eggs’ embryogenesis. Here, we study the sequence evolution and gene expression of the duplicated genes coding for androgen receptors (ars) and other pathway-related genes, i.e., the estrogen receptors (ers) and cytochrome P450, family19, subfamily A, aromatase genes (cyp19as), in the Amazon molly, in comparison to its bisexual ancestors. Mollies possess–as most other teleost fish—two copies of the ar, er, and cyp19a genes, i.e., arα/arβ, erα/erβ1, and cyp19a1 (also referred as cyp19a1a)/cyp19a2 (also referred to as cyp19a1b), respectively. Non-synonymous single nucleotide polymorphisms (SNPs) among the ancestral bisexual species were generally predicted not to alter protein function. Some derived substitutions in the P. mexicana and one in P. formosa are predicted to impact protein function. We also describe the gene expression pattern of the ars and pathway-related genes in various tissues (i.e., brain, gill, and ovary) and provide SNP markers for allele specific expression research. As a general tendency, the levels of gene expression were lowest in gill and highest in ovarian tissues, while expression levels in the brain were intermediate in most cases. Expression levels in P. formosa were conserved where expression did not differ between the two bisexual ancestors. In those cases where gene expression levels significantly differed between the bisexual species, P. formosa expression was always comparable to the higher expression level among the two ancestors. Interestingly, erβ1 was expressed neither in brain nor in gill in the analyzed three molly species, which implies a more important role of erα in the estradiol synthesis pathway in these tissues. Furthermore, our data suggest that interactions of steroid-signaling pathway genes differ across tissues, in particular the interactions of ars and cyp19as. Y1 - 2016 U6 - https://doi.org/10.1371/JOURNAL.PONE.0156209 SN - 1932-6203 VL - 11 IS - 6 PB - PLoS CY - Lawrence, Kan. ER - TY - JOUR A1 - Meiling, Till Thomas A1 - Cywiński, Piotr J. A1 - Bald, Ilko T1 - White carbon: Fluorescent carbon nanoparticles with tunable quantum yield in a reproducible green synthesis JF - Scientific reports N2 - In this study, a new reliable, economic, and environmentally-friendly one-step synthesis is established to obtain carbon nanodots (CNDs) with well-defined and reproducible photoluminescence (PL) properties via the microwave-assisted hydrothermal treatment of starch and Tris-acetate-EDTA (TAE) buffer as carbon sources. Three kinds of CNDs are prepared using different sets of above mentioned starting materials. The as-synthesized CNDs: C-CND (starch only), N-CND 1 (starch in TAE) and N-CND 2 (TAE only) exhibit highly homogenous PL and are ready to use without need for further purification. The CNDs are stable over a long period of time (>1 year) either in solution or as freeze-dried powder. Depending on starting material, CNDs with PL quantum yield (PLQY) ranging from less than 1% up to 28% are obtained. The influence of the precursor concentration, reaction time and type of additives on the optical properties (UV-Vis absorption, PL emission spectrum and PLQY) is carefully investigated, providing insight into the chemical processes that occur during CND formation. Remarkably, upon freeze-drying the initially brown CND-solution turns into a non-fluorescent white/slightly brown powder which recovers PL in aqueous solution and can potentially be applied as fluorescent marker in bio-imaging, as a reduction agent or as a photocatalyst. KW - Fluorescence spectroscopy KW - Nanoparticles KW - Synthesis and processing Y1 - 2016 U6 - https://doi.org/10.1038/srep28557 VL - 6 PB - Nature Publishing Group CY - London ER - TY - JOUR A1 - Antoniewicz, Franziska A1 - Brand, Ralf T1 - Dropping Out or Keeping Up? BT - Early-Dropouts, Late-Dropouts, and Maintainers Differ in Their Automatic Evaluations of Exercise Already before a 14-Week Exercise Course JF - Frontiers in psychology N2 - The aim of this study was to examine how automatic evaluations of exercising (AEE) varied according to adherence to an exercise program. Eighty-eight participants (24.98 years ± 6.88; 51.1% female) completed a Brief-Implicit Association Task assessing their AEE, positive and negative associations to exercising at the beginning of a 3-month exercise program. Attendance data were collected for all participants and used in a cluster analysis of adherence patterns. Three different adherence patterns (52 maintainers, 16 early dropouts, 20 late dropouts; 40.91% overall dropouts) were detected using cluster analyses. Participants from these three clusters differed significantly with regard to their positive and negative associations to exercising before the first course meeting (η2p = 0.07). Discriminant function analyses revealed that positive associations to exercising was a particularly good discriminating factor. This is the first study to provide evidence of the differential impact of positive and negative associations on exercise behavior over the medium term. The findings contribute to theoretical understanding of evaluative processes from a dual-process perspective and may provide a basis for targeted interventions. KW - exercise adherence KW - automatic evaluations KW - BIAT KW - dropout KW - associations KW - affect Y1 - 2016 U6 - https://doi.org/10.3389/fpsyg.2016.00838 SN - 1664-1078 VL - 7 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Thieken, Annegret A1 - Kienzler, Sarah A1 - Kreibich, Heidi A1 - Kuhlicke, Christian A1 - Kunz, Michael A1 - Mühr, Bernhard A1 - Müller, Meike A1 - Otto, Antje A1 - Petrow, Theresia A1 - Pisi, Sebastian A1 - Schröter, Kai T1 - Review of the flood risk management system in Germany after the major flood in 2013 JF - Ecology and society : E&S ; a journal of integrative science for resilience and sustainability N2 - Widespread flooding in June 2013 caused damage costs of €6 to 8 billion in Germany, and awoke many memories of the floods in August 2002, which resulted in total damage of €11.6 billion and hence was the most expensive natural hazard event in Germany up to now. The event of 2002 does, however, also mark a reorientation toward an integrated flood risk management system in Germany. Therefore, the flood of 2013 offered the opportunity to review how the measures that politics, administration, and civil society have implemented since 2002 helped to cope with the flood and what still needs to be done to achieve effective and more integrated flood risk management. The review highlights considerable improvements on many levels, in particular (1) an increased consideration of flood hazards in spatial planning and urban development, (2) comprehensive property-level mitigation and preparedness measures, (3) more effective flood warnings and improved coordination of disaster response, and (4) a more targeted maintenance of flood defense systems. In 2013, this led to more effective flood management and to a reduction of damage. Nevertheless, important aspects remain unclear and need to be clarified. This particularly holds for balanced and coordinated strategies for reducing and overcoming the impacts of flooding in large catchments, cross-border and interdisciplinary cooperation, the role of the general public in the different phases of flood risk management, as well as a transparent risk transfer system. Recurring flood events reveal that flood risk management is a continuous task. Hence, risk drivers, such as climate change, land-use changes, economic developments, or demographic change and the resultant risks must be investigated at regular intervals, and risk reduction strategies and processes must be reassessed as well as adapted and implemented in a dialogue with all stakeholders. KW - August 2002 flood KW - Central Europe KW - Floods Directive KW - governance KW - June 2013 flood KW - risk management cycle Y1 - 2016 U6 - https://doi.org/10.5751/ES-08547-210251 SN - 1708-3087 SN - 1195-5449 VL - 21 IS - 2 PB - Resilience Alliance CY - Wolfville, NS ER - TY - JOUR A1 - Batsios, Petros A1 - Ren, Xiang A1 - Baumann, Otto A1 - Larochelle, Denis A. A1 - Gräf, Ralph T1 - Src1 is a Protein of the Inner Nuclear Membrane Interacting with the Dictyostelium Lamin NE81 JF - Cells N2 - The nuclear envelope (NE) consists of the outer and inner nuclear membrane (INM), whereby the latter is bound to the nuclear lamina. Src1 is a Dictyostelium homologue of the helix-extension-helix family of proteins, which also includes the human lamin-binding protein MAN1. Both endogenous Src1 and GFP-Src1 are localized to the NE during the entire cell cycle. Immuno-electron microscopy and light microscopy after differential detergent treatment indicated that Src1 resides in the INM. FRAP experiments with GFP-Src1 cells suggested that at least a fraction of the protein could be stably engaged in forming the nuclear lamina together with the Dictyostelium lamin NE81. Both a BioID proximity assay and mis-localization of soluble, truncated mRFP-Src1 at cytosolic clusters consisting of an intentionally mis-localized mutant of GFP-NE81 confirmed an interaction of Src1 and NE81. Expression GFP-Src11–646, a fragment C-terminally truncated after the first transmembrane domain, disrupted interaction of nuclear membranes with the nuclear lamina, as cells formed protrusions of the NE that were dependent on cytoskeletal pulling forces. Protrusions were dependent on intact microtubules but not actin filaments. Our results indicate that Src1 is required for integrity of the NE and highlight Dictyostelium as a promising model for the evolution of nuclear architecture. KW - Dictyostelium KW - lamin KW - nuclear lamina KW - nucleus KW - nucleolus KW - HeH-protein KW - LEM-domain protein Y1 - 2016 U6 - https://doi.org/10.3390/cells5010013 SN - 2073-4409 VL - 5 IS - 1 PB - MDPI CY - Basel ER - TY - THES A1 - Orf, Isabel T1 - Photorespiratory metabolism in the cyanobacterial model Synechocystis sp. strain PCC 6803 BT - a systems biology approach Y1 - 2016 ER - TY - THES A1 - Chutsagulprom, Nawinda T1 - Ensemble-based filters dealing with non-Gaussianity and nonlinearity Y1 - 2016 ER - TY - JOUR A1 - Beurskens, Rainer A1 - Haeger, Matthias A1 - Kliegl, Reinhold A1 - Roecker, Kai A1 - Granacher, Urs T1 - Postural Control in Dual-Task Situations BT - Does Whole-Body Fatigue Matter? JF - PLoS one N2 - Postural control is important to cope with demands of everyday life. It has been shown that both attentional demand (i.e., cognitive processing) and fatigue affect postural control in young adults. However, their combined effect is still unresolved. Therefore, we investigated the effects of fatigue on single- (ST) and dual-task (DT) postural control. Twenty young subjects (age: 23.7 ± 2.7) performed an all-out incremental treadmill protocol. After each completed stage, one-legged-stance performance on a force platform under ST (i.e., one-legged-stance only) and DT conditions (i.e., one-legged-stance while subtracting serial 3s) was registered. On a second test day, subjects conducted the same balance tasks for the control condition (i.e., non-fatigued). Results showed that heart rate, lactate, and ventilation increased following fatigue (all p < 0.001; d = 4.2–21). Postural sway and sway velocity increased during DT compared to ST (all p < 0.001; d = 1.9–2.0) and fatigued compared to non-fatigued condition (all p < 0.001; d = 3.3–4.2). In addition, postural control deteriorated with each completed stage during the treadmill protocol (all p < 0.01; d = 1.9–3.3). The addition of an attention-demanding interference task did not further impede one-legged-stance performance. Although both additional attentional demand and physical fatigue affected postural control in healthy young adults, there was no evidence for an overadditive effect (i.e., fatigue-related performance decrements in postural control were similar under ST and DT conditions). Thus, attentional resources were sufficient to cope with the DT situations in the fatigue condition of this experiment. Y1 - 2016 U6 - https://doi.org/10.1371/journal.pone.0147392 SN - 1932-6203 VL - 11 IS - 1 SP - 1 EP - 15 PB - PLoS CY - Lawrence, Kan. ER - TY - THES A1 - Kovach, Ildiko T1 - Development, characterization of Janus emulsions, and their usage as a template phase for fabricating biopolymer scaffolds Y1 - 2016 ER - TY - THES A1 - Dionysopoulou, Kyriaki T1 - General-relativistic magnetohydrodynamics in compact objects BT - a resistive-magnetohydrodynamics approach Y1 - 2016 ER - TY - THES A1 - Kalbe, Johannes T1 - Stepping stones hominin dispersal out of Africa BT - pleistocene lakes and wetlands in the Levant Y1 - 2016 ER - TY - THES A1 - Reinecke, Antje Adriana T1 - Impact of protein structure on the mechanics and assembly of mytilus byssal threads Y1 - 2016 ER - TY - JOUR A1 - Cherstvy, Andrey G. A1 - Metzler, Ralf T1 - Anomalous diffusion in time-fluctuating non-stationary diffusivity landscapes JF - Physical chemistry, chemical physics : PCCP ; a journal of European chemical societies N2 - We investigate the ensemble and time averaged mean squared displacements for particle diffusion in a simple model for disordered media by assuming that the local diffusivity is both fluctuating in time and has a deterministic average growth or decay in time. In this study we compare computer simulations of the stochastic Langevin equation for this random diffusion process with analytical results. We explore the regimes of normal Brownian motion as well as anomalous diffusion in the sub- and superdiffusive regimes. We also consider effects of the inertial term on the particle motion. The investigation of the resulting diffusion is performed for unconfined and confined motion. Y1 - 2016 U6 - https://doi.org/10.1039/C6CP03101C SN - 1463-9084 SN - 1463-9076 VL - 18 SP - 23840 EP - 23852 PB - RSC Publ. CY - Cambridge ER - TY - JOUR A1 - Ghosh, Surya K. A1 - Cherstvy, Andrey G. A1 - Petrov, Eugene P. A1 - Metzler, Ralf T1 - Interactions of rod-like particles on responsive elastic sheets JF - Soft matter N2 - What are the physical laws of the mutual interactions of objects bound to cell membranes, such as various membrane proteins or elongated virus particles? To rationalise this, we here investigate by extensive computer simulations mutual interactions of rod-like particles adsorbed on the surface of responsive elastic two-dimensional sheets. Specifically, we quantify sheet deformations as a response to adhesion of such filamentous particles. We demonstrate that tip-to-tip contacts of rods are favoured for relatively soft sheets, while side-by-side contacts are preferred for stiffer elastic substrates. These attractive orientation-dependent substrate-mediated interactions between the rod-like particles on responsive sheets can drive their aggregation and self-assembly. The optimal orientation of the membrane-bound rods is established via responding to the elastic energy profiles created around the particles. We unveil the phase diagramme of attractive–repulsive rod–rod interactions in the plane of their separation and mutual orientation. Applications of our results to other systems featuring membrane-associated particles are also discussed. Y1 - 2016 U6 - https://doi.org/10.1039/C6SM01522K SN - 1744-6848 SN - 1744-683X PB - RSC CY - London ER - TY - JOUR A1 - Doriti, Afroditi A1 - Brosnan, Sarah M. A1 - Weidner, Steffen M. A1 - Schlaad, Helmut T1 - Synthesis of polysarcosine from air and moisture stable N-phenoxycarbonyl-N-methylglycine assisted by tertiary amine base JF - Polymer Chemistry N2 - Polysarcosine (Mn = 3650–20 000 g mol−1, Đ ∼ 1.1) was synthesized from the air and moisture stable N-phenoxycarbonyl-N-methylglycine. Polymerization was achieved by in situ transformation of the urethane precursor into the corresponding N-methylglycine-N-carboxyanhydride, when in the presence of a non-nucleophilic tertiary amine base and a primary amine initiator. KW - ring-opening polymerization KW - activated urethane derivatives KW - phosgene-free synthesis KW - carboxyanhydrides KW - polypeptides KW - acids KW - copolymers Y1 - 2016 U6 - https://doi.org/10.1039/C6PY00221H SN - 1759-9954 SN - 1759-9962 VL - 7 SP - 3067 EP - 3070 PB - RSC Publ. CY - Cambridge ER - TY - JOUR A1 - Olejko, Lydia A1 - Cywiński, Piotr J. A1 - Bald, Ilko T1 - An ion-controlled four-color fluorescent telomeric switch on DNA origami structures JF - Nanoscale N2 - The folding of single-stranded telomeric DNA into guanine (G) quadruplexes is a conformational change that plays a major role in sensing and drug targeting. The telomeric DNA can be placed on DNA origami nanostructures to make the folding process extremely selective for K+ ions even in the presence of high Na+ concentrations. Here, we demonstrate that the K+-selective G-quadruplex formation is reversible when using a cryptand to remove K+ from the G-quadruplex. We present a full characterization of the reversible switching between single-stranded telomeric DNA and G-quadruplex structures using Förster resonance energy transfer (FRET) between the dyes fluorescein (FAM) and cyanine3 (Cy3). When attached to the DNA origami platform, the G-quadruplex switch can be incorporated into more complex photonic networks, which is demonstrated for a three-color and a four-color FRET cascade from FAM over Cy3 and Cy5 to IRDye700 with G-quadruplex-Cy3 acting as a switchable transmitter. KW - resonance energy-transfer KW - g-quadruplex KW - quantum dots KW - strand breakage KW - photonic wires KW - 3-color fret KW - nanostructures KW - recognition KW - sensitivity KW - assemblies Y1 - 2016 U6 - https://doi.org/10.1039/C6NR00119J SN - 2040-3372 SN - 2040-3364 VL - 8 SP - 10339 EP - 10347 PB - RSC Publ. CY - Cambridge ER - TY - JOUR A1 - Niedl, Robert Raimund A1 - Berenstein, Igal A1 - Beta, Carsten T1 - How imperfect mixing and differential diffusion accelerate the rate of nonlinear reactions in microfluidic channels JF - Physical chemistry, chemical physics : PCCP ; a journal of European Chemical Societies N2 - In this paper, we show experimentally that inside a microfluidic device, where the reactants are segregated, the reaction rate of an autocatalytic clock reaction is accelerated in comparison to the case where all the reactants are well mixed. We also find that, when mixing is enhanced inside the microfluidic device by introducing obstacles into the flow, the clock reaction becomes slower in comparison to the device where mixing is less efficient. Based on numerical simulations, we show that this effect can be explained by the interplay of nonlinear reaction kinetics (cubic autocatalysis) and differential diffusion, where the autocatalytic species diffuses slower than the substrate. KW - arsenious acid KW - systems KW - poly(dimethylsiloxane) KW - fronts KW - scale KW - paper Y1 - 2016 U6 - https://doi.org/10.1039/c6cp00224b SN - 1463-9076 SN - 1463-9084 VL - 18 SP - 6451 EP - 6457 PB - Royal Society of Chemistry CY - Cambridge ER - TY - BOOK A1 - Pikovskij, Arkadij A1 - Politi, Antonio T1 - Lyapunov Exponents BT - a tool to explore complex dynamics N2 - Lyapunov exponents lie at the heart of chaos theory, and are widely used in studies of complex dynamics. Utilising a pragmatic, physical approach, this self-contained book provides a comprehensive description of the concept. Beginning with the basic properties and numerical methods, it then guides readers through to the most recent advances in applications to complex systems. Practical algorithms are thoroughly reviewed and their performance is discussed, while a broad set of examples illustrate the wide range of potential applications. The description of various numerical and analytical techniques for the computation of Lyapunov exponents offers an extensive array of tools for the characterization of phenomena such as synchronization, weak and global chaos in low and high-dimensional set-ups, and localization. This text equips readers with all the investigative expertise needed to fully explore the dynamical properties of complex systems, making it ideal for both graduate students and experienced researchers. Y1 - 2016 SN - 978-1-107-03042-8 PB - Cambridge University Press CY - Cambridge ER - TY - THES A1 - Küttner, Uwe-Alexander T1 - That-initial turns in English conversation BT - an interactional linguistic investigation of two formats for designedly tying a current turn to a prior Y1 - 2016 ER - TY - THES A1 - Lehmann, Jascha In-su T1 - Changes in extratropical storm track activity and their implications for extreme weather events Y1 - 2016 ER - TY - THES A1 - Lutz, Johannes T1 - Reducing anger and aggession through eliciting incompatible emotions BT - an affective-motivational approach to situated anger and aggression control Y1 - 2016 ER - TY - THES A1 - Baumann, Julian T1 - Four essays in innovation and industrial economics Y1 - 2016 ER - TY - THES A1 - Emantoko Dwi Putra, Sulistyo T1 - Placental DNA Methylation in Association with Maternal Heath and Birth Outcomes Y1 - 2016 ER - TY - THES A1 - Rezanezhad, Vahid T1 - Inversion of the 2004 M6.0 Parkfield Earthquake Coseismic Offsets by Partition Model Y1 - 2016 ER - TY - THES A1 - Shahnejat-Bushehri, Sara T1 - Unravelling the role of the Arabidopsis NAC transcription factor JUNGBRUNNEN1 (JUB1) for the regulation of growth and stress responses Y1 - 2016 ER - TY - CHAP A1 - Usik, Lillia T1 - A Comparative Analysis of the Frozen Conflicts in the Post-Soviet Space T2 - The European Union and Russia Y1 - 2016 SP - 193 EP - 239 PB - WeltTrends CY - Potsdam ER - TY - CHAP A1 - Franzke, Jochen T1 - After the Strategic Partnership BT - Germany in Search for a New Strategy towards Russia T2 - The European Union and Russia Y1 - 2016 SP - 9 EP - 25 PB - WeltTrends CY - Potsdam ER - TY - BOOK ED - Franzke, Jochen ED - Koszel, Bogdan ED - Kinyakin, Andrej T1 - The European Union and Russia BT - causes of the Crisis and Potential for Cooperation T3 - Potsdamer Textbücher ; 28 N2 - Since spring 2014 the relations between the EU and Russia are stuck in an Ice Age. From a Western point of view, especially the annexation of Crimea by Russia and the intervention in the conflict in Ukraine are responsible. The EU has frozen their relations to Russia and applied sanctions against it. Russia reacted in the same way. Can this vicious circle be broken without betraying the values of the EU? This book presents the analysis and ideas of social scientists from Germany, Poland and Russia. The reasons for this crisis are seen quite differently but all try to find a way out of the current confrontation. Y1 - 2016 SN - 978-3-945878-21-7 PB - Welttrends CY - Potsdam ER - TY - THES A1 - Peters, Arne T1 - Linguistic Change in Galway City English BT - A Variationist Sociolinguistic Study of (th) and (dh) in Urban Western Irish English T2 - Duisburger Arbeiten zur Sprach- und Kulturwissenschaft / Duisburg Papers on Research in Language and Culture ; 116 N2 - This volume is a novel approach to the corpus-based variationist sociolinguistic study of contemporary urban western Irish English. Based on qualitative data as well as on linguistic features extracted from the Corpus of Galway City Spoken English, this study approaches the major sociolinguistic characteristics of (th) and (dh) variability in Galway City English. It demonstrates the diverse local patterns of variability and change in the phonetic realisation of the dental fricatives and establishes a considerable degree of divergence from traditional accounts on Irish English. This volume suggests that the linguistic stratification of variants of (th) and (dh) in Galway correlates both with the social stratification of the city itself and with the stratification of speakers by social status, sex/gender and age group. Y1 - 2016 SN - 978-3-631-67178-8 PB - Lang CY - Frankfurt am Main ER -