TY - JOUR A1 - Clahsen, Harald A1 - Hansen, Detlef T1 - Profiling linguistic disability in German-speaking children JF - Assessing Grammar : the Languages of LARSP Y1 - 2012 SN - 978-1-8476-9639-7 U6 - https://doi.org/10.21832/9781847696397-007 SP - 77 EP - 91 PB - Multilingual Matters CY - Bristol ER - TY - JOUR A1 - Mackert, Jürgen T1 - Social Closure JF - Oxford Bibliographies N2 - “Social closure” is one of the most basic terms and concepts in sociology. Basically, closure refers to processes of drawing boundaries, constructing identities, and building communities in order to monopolize scarce resources for one’s own group, thereby excluding others from using them. Society is not a homogenous entity but is instead internally structured and subdivided by processes of social closure. Some social formations, such as groups, organizations, or institutions, may be open to everybody, provided they are capable of participation, while access to most others is limited due to certain criteria that either allow people to become members or exclude them from membership. Therefore, social closure is a ubiquitous, everyday phenomenon that can be observed in almost every sphere and place in the social world. Members of societies experience closure from the very beginning of their social life. To be excluded from certain groups starts at school, where presumably homogenous classes begin to subdivide into distinct peer groups or sports teams. Here, exclusion may be rather arbitrary, but the experience of having a door slammed in one’s face proceeds in cases, where inclusion depends on formal rules or preconditions. Access to private schools follows explicit rules and depends on financial capacities; access to university depends on a certificate or diploma, eventually from certain schools only; membership in a highly prestigious club depends on economic and social capital and the respective social networks; and finally, in the case of migration, people will have to be eligible for citizenship and pass the thorny path of naturalization. However, it is not just the enormous plurality of forms that makes social closure crucial for sociology. Rather, the process of closure of social relations—of groups, organizations, institutions, and even national societies—is the fundamental process of both “communal” (Vergemeinschaftung) and “associative” relationships (Vergesellschaftung), and neither would be possible without social closure. In this broad and fundamental sense, social closure is not restricted to processes in national societies. It even allows for understanding crucial processes of the way the social world is organized at the regional or global level. Y1 - 2012 U6 - https://doi.org/10.1093/obo/9780199756384-0084 PB - Oxford University CY - Oxford ER - TY - JOUR A1 - Günther, Oliver T1 - More politics in the GI - More GI in politics JF - Informatik-Spektrum Y1 - 2012 U6 - https://doi.org/10.1007/s00287-012-0657-9 VL - 35 IS - 6 SP - 397 EP - 398 ER - TY - JOUR A1 - Winkler, Till J. A1 - Goebel, Christoph A1 - Bidault, Francis A1 - Günther, Oliver T1 - Information technology and business practieses in Germany BT - results from the 2011 bit survey JF - The UCLA Anderson Business and Information Technologies (BIT) Project Y1 - 2012 U6 - https://doi.org/10.1142/9789814390880_0005 SP - 81 EP - 114 PB - world scientific CY - Singapore ER - TY - JOUR A1 - Günther, Oliver A1 - Brecht, Franziska A1 - Eckhardt, Andreas A1 - Berger, Christian T1 - Corporate career presences on social network sites: an analysis of hedonic and utilitarian value JF - CHI '12 Proceedings of the SIGCHI Conference on Human Factors in Computing Systems N2 - Due to the shortage of skilled workforce and the increasing usage of social network sites, companies increasingly apply social network sites to attract potential applicants. This paper explores how corporate career presences on network sites should be realized in order to attract potential applicants. Therefore, we tested the impact of seven individual characteristics (namely Appointments, Daily Working Routine, Jobs, Corporate News, Entertainment, Media Format, and Features) of these corporate career presences that we extracted by a comprehensive pre-study on users' perceived hedonic and utilitarian value of these presences on social network sites. Based on an online survey with 470 participants, the results reveal a highly significant impact of five characteristics that corporate career presences provide both a hedonic as well as a utilitarian value to the user Y1 - 2012 SN - 978-1-4503-1015-4 U6 - https://doi.org/10.1145/2207676.2208408 SP - 2441 EP - 2450 PB - ACM CY - Texas ER - TY - JOUR A1 - Pimpalpalle, Tukaram M. A1 - Yin, Jian A1 - Linker, Torsten T1 - Barton radical reactions of 2-C-branched carbohydrates JF - Organic & biomolecular chemistry : an international journal of synthetic, physical and biomolecular organic chemistry N2 - Barton esters have been introduced into the side chain of carbohydrates with high yields in only a few steps from easily available glycals. Their radical reactions afford 2-C-methyl and 2-C-bromomethyl hexoses, pentoses and disaccharides in good yields in analytically pure form. Since the Barton esters have been synthesized by an oxidative radical addition and their transformations by reductive radical processes, our results demonstrate the power of such reactions in carbohydrate chemistry. Y1 - 2012 U6 - https://doi.org/10.1039/c1ob06370g SN - 1477-0520 VL - 10 IS - 1 SP - 103 EP - 109 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Wang, Yongbo A1 - Liu, Xingqi A1 - Mischke, Steffen A1 - Herzschuh, Ulrike T1 - Environmental constraints on lake sediment mineral compositions from the Tibetan Plateau and implications for paleoenvironment reconstruction JF - Journal of paleolimnolog N2 - Inorganic minerals form a major component of lacustrine sediments and have the potential to reveal detailed information on previous climatic and hydrological conditions. The ability to extract such information however, has been restricted by a limited understanding of the relationships between minerals and the environment. In an attempt to fill in this gap in our knowledge, 146 surface sediment samples have been investigated from 146 lakes on the Tibetan Plateau. The mineral compositions derived from these samples by X-Ray Diffraction (XRD) were used to examine the relationships between mineral compositions and the environmental variables determined for each site. Statistical techniques including Multivariate regression trees (MRT) and Redundancy Analysis (RDA), based on the mineral spectra and environmental variables, reveal that the electrical conductivity (EC) and Mg/Ca ratios of lake water are the most important controls on the composition of endogenic minerals. No endogenic minerals precipitate under hyper-fresh water conditions (EC lower than 0.13 mS/cm), with calcite commonly forming in water with EC values above 0.13 mS/cm. Between EC values of 0.13 and 26 mS/cm the mineral composition of lake sediments can be explained in terms of variations in the Mg/Ca ratio: calcite dominates at Mg/Ca ratios of less than 33, whereas aragonite commonly forms when the ratio is greater than 33. Where EC values are between 26 and 39 mS/cm, monohydrocalcite precipitates together with calcite and aragonite; above 39 mS/cm, gypsum and halite commonly form. Information on the local geological strata indicates that allogenic (detrital) mineral compositions are primarily influenced by the bedrock compositions within the catchment area. By applying these relationships to the late glacial and Holocene mineral record from Chaka Salt Lake, five lake stages have been identified and their associated EC conditions inferred. The lake evolved from a freshwater lake during the late glacial (before 11.4 cal. ka BP) represented by the lowest EC values (< 0.13 mS/cm), to a saline lake with EC values slightly higher than 39 mS/cm during the early and mid Holocene (ca. 11.4-5.3 cal. ka BP), and finally to a salt lake (after 5.3 cal. ka BP). These results illustrate the utility of our mineral-environmental model for the quantitative reconstruction of past environmental conditions from lake sediment records. KW - Mineral composition KW - XRD KW - Multivariate regression trees KW - Electrical conductivity KW - Paleolimnology KW - Tibetan Plateau Y1 - 2012 U6 - https://doi.org/10.1007/s10933-011-9549-2 SN - 0921-2728 VL - 47 IS - 1 SP - 71 EP - 85 PB - Springer CY - Dordrecht ER - TY - JOUR A1 - Hildebrandt, Niko A1 - Geissler, Daniel ED - Zahavy, E ED - Ordentlich, A ED - Yitzhaki, S ED - Shafferman, A T1 - Semiconductor quantum dots as FRET acceptors for multiplexed diagnostics and molecular ruler application JF - Advances in Experimental Medicine and Biology N2 - Applications based on Forster resonance energy transfer (FRET) play an important role for the determination of concentrations and distances within nanometer-scale systems in vitro and in vivo in many fields of biotechnology. Semiconductor nanocrystals (Quantum dots - QDs) possess ideal properties for their application as FRET acceptors when the donors have long excited state lifetimes and when direct excitation of QDs can be efficiently suppressed. Therefore, luminescent terbium complexes (LTCs) with excited state lifetimes of more than 2 ms are ideal FRET donor candidates for QD-acceptors. This chapter will give a short overview of theoretical and practical background of FRET, QDs and LTCs, and present some recent applications of LTC-QD FRET pairs for multiplexed ultra-sensitive in vitro diagnostics and nanometer-resolution molecular distance measurements. KW - Diagnostics KW - FRET KW - Imaging KW - Quantum dots KW - Terbium Y1 - 2012 SN - 978-94-007-2554-6 SN - 978-94-007-2555-3 U6 - https://doi.org/10.1007/978-94-007-2555-3_8 SN - 0065-2598 VL - 733 SP - 75 EP - 86 PB - Springer CY - Dordrecht ER - TY - JOUR A1 - Wellmann, Caroline A1 - Holzgrefe-Lang, Julia A1 - Truckenbrodt, Hubert A1 - Wartenburger, Isabell A1 - Höhle, Barbara T1 - How each prosodic boundary cue matters evidence from German infants JF - Frontiers in psychology N2 - Previous studies have revealed that infants aged 6-10 months are able to use the acoustic correlates of major prosodic boundaries, that is, pitch change, preboundary lengthening, and pause, for the segmentation of the continuous speech signal. Moreover, investigations with American-English- and Dutch-learning infants suggest that processing prosodic boundary markings involves a weighting of these cues. This weighting seems to develop with increasing exposure to the native language and to underlie crosslinguistic variation. In the following, we report the results of four experiments using the headturn preference procedure to explore the perception of prosodic boundary cues in German infants. We presented 8-month-old infants with a sequence of names in two different prosodic groupings, with or without boundary markers. Infants discriminated both sequences when the boundary was marked by all three cues (Experiment 1) and when it was marked by a pitch change and preboundary lengthening in combination (Experiment 2). The presence of a pitch change (Experiment 3) or preboundary lengthening (Experiment 4) as single cues did not lead to a successful discrimination. Our results indicate that pause is not a necessary cue for German infants. Pitch change and preboundary lengthening in combination, but not as single cues, are sufficient. Hence, by 8 months infants only rely on a convergence of boundary markers. Comparisons with adults' performance on the same stimulus materials suggest that the pattern observed with the 8-month-olds is already consistent with that of adults. We discuss our findings with respect to crosslinguistic variation and the development of a language-specific prosodic cue weighting. KW - infants KW - language acquisition KW - speech perception KW - prosodic bootstrapping KW - prosodic boundary cues KW - cue weighting KW - intonation phrase boundary KW - headturn preference procedure Y1 - 2012 U6 - https://doi.org/10.3389/fpsyg.2012.00580 SN - 1664-1078 VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Henrichs, Ivanina A1 - Elsner, Claudia A1 - Elsner, Birgit A1 - Gredeback, Gustaf T1 - Goal salience affects infants' goal-directed gaze shifts JF - Frontiers in psychology N2 - Around their first year of life, infants are able to anticipate the goal of others' ongoing actions. For instance, 12-month-olds anticipate the goal of everyday feeding actions and manual actions such as reaching and grasping. However, little is known whether the salience of the goal influences infants' online assessment of others' actions. The aim of the current eye-tracking study was to elucidate infants' ability to anticipate reaching actions depending on the visual salience of the goal object. In Experiment 1, 12-month-old infants' goal-directed gaze shifts were recorded as they observed a hand reaching for and grasping either a large (high-salience condition) or a small (low-salience condition) goal object. Infants exhibited predictive gaze shifts significantly earlier when the observed hand reached for the large goal object compared to when it reached for the small goal object. In addition, findings revealed rapid learning over the course of trials in the high-salience condition and no learning in the low-salience condition. Experiment 2 demonstrated that the results could not be simply attributed to the different grip aperture of the hand used when reaching for small and large objects. Together, our data indicate that by the end of their first year of life, infants rely on information about the goal salience to make inferences about the action goal. KW - anticipation KW - eye movement KW - salience KW - infant KW - action understanding Y1 - 2012 U6 - https://doi.org/10.3389/fpsyg.2012.00391 SN - 1664-1078 VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Festman, Julia A1 - Muente, Thomas F. T1 - Cognitive control in Russian-German bilinguals JF - Frontiers in psychology N2 - Bilingual speakers are faced with the problem to keep their languages apart, but do so with interindividually varying success. Cognitive control abilities might be an important factor to explain such interindividual differences. Here we compare two late, balanced and highly proficient bilingual groups (mean age 24 years, L1 Russian, L2 German) which were established according to their language control abilities on a bilingual picture-naming task. One group had difficulties to remain in the instructed target language and switched unintentionally to the non-target language ("switchers"), whereas the other group rarely switched unintentionally ("non-switchers"). This group-specific behavior could not be explained by language background, socio-cultural, or demographic variables. Rather, the non-switchers also demonstrated a faster and better performance on four cognitive control tests (Tower of Hanoi, Ruff Figural Fluency Test, Divided Attention, Go/Nogo). Here, we focus on two additional executive function tasks, theWisconsin Card SortingTest (WCST) and the Flanker task requiring conflict monitoring and conflict resolution. Non-switchers outperformed switchers with regard to speed and accuracy, and were better at finding and applying the correct rules in the WCST. Similarly, in the Flanker task non-switchers performed faster and better on conflict trials and had a higher correction rate following an error. Event-related potential recordings furthermore revealed a smaller error-related negativity in the non-switchers, taken as evidence for a more efficient self-monitoring system. We conclude that bilingual language performance, in particular switching behavior, is related to performance on cognitive control tasks. Better cognitive control, including conflict monitoring, results in decreased unintentional switching. KW - Flanker task KW - ERN KW - Wisconsin Card Sorting Test KW - conflict monitoring KW - inhibition KW - late bilinguals KW - cognitive control KW - executive function Y1 - 2012 U6 - https://doi.org/10.3389/fpsyg.2012.00115 SN - 1664-1078 VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Domahs, Ulrike A1 - Knaus, Johannes A1 - Orzechowska, Paula A1 - Wiese, Richard T1 - Stress "deafness" in a language with fixed word stress an ERR study on Polish JF - Frontiers in psychology N2 - The aim of the present contribution was to examine the factors influencing the prosodic processing in a language with predictable word stress. For Polish, a language with fixed penultimate stress but several well-defined exceptions, difficulties in the processing and representation of prosodic information have been reported (e.g., Peperkamp and Dupoux, 2002). The present study utilized event-related potentials (ERPs) to investigate the factors influencing prosodic processing in Polish. These factors are (i) the predictability of stress and (ii) the prosodic structure in terms of metrical feet. Polish native speakers were presented with correctly and incorrectly stressed Polish words and instructed to judge the correctness of the perceived stress patterns. For some stress violations, an early negativity was found which was interpreted as a reflection of an error-detection mechanism. In addition, exceptional stress patterns (=antepenultimate stress) and post-lexical (=initial) stress evoked a task-related positivity effect (P300) whose amplitude and latency is correlated with the degree of anomaly and deviation from an expectation. In contrast, violations involving the default (=penultimate stress) did not produce such an effect. This asymmetrical result is interpreted to reflect that Polish native speakers are less sensitive to the default pattern than to the exceptional or post-lexical patterns. Behavioral results are orthogonal to the electrophysiological results showing that Polish speakers had difficulties to reject any kind of stress violation. Thus, on a meta-linguistic level Polish speakers appeared to be stress-"deaf" for any kind of stress manipulation, whereas the neural reactions differentiate between the default and lexicalized patterns. KW - stress "deafness" KW - fixed stress system KW - prosodic representation KW - P300 KW - generalized error-detection mechanism Y1 - 2012 U6 - https://doi.org/10.3389/fpsyg.2012.00439 SN - 1664-1078 VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Rocchetti, Alessandra A1 - Sharma, Tripti A1 - Wulfetange, Camilla A1 - Scholz-Starke, Joachim A1 - Grippa, Alexandra A1 - Carpaneto, Armando A1 - Dreyer, Ingo A1 - Vitale, Alessandro A1 - Czempinski, Katrin A1 - Pedrazzini, Emanuela T1 - The putative K+ channel subunit AtKCO3 forms stable dimers in arabidopsis JF - Frontiers in plant science N2 - The permeation pore of K+ channels is formed by four copies of the pore domain. AtKCO3 is the only putative voltage-independent K+ channel subunit of Arabidopsis thaliana with a single pore domain. KCO3-like proteins recently emerged in evolution and, to date, have been found only in the genus Arabidopsis (A. thaliana and A. lyrata). We show that the absence of KCO3 does not cause marked changes in growth under various conditions. Only under osmotic stress we observed reduced root growth of the kco3-1 null-allele line. This phenotype was complemented by expressing a KCO3 mutant with an inactive pore, indicating that the function of KCO3 under osmotic stress does not depend on its direct ability to transport ions. Constitutively overexpressed AtKCO3 or AtKCO3::G FP are efficiently sorted to the tonoplast indicating that the protein is approved by the endoplasmic reticulum quality control. However, vacuoles isolated from transgenic plants do not have significant alterations in current density. Consistently, both AtKCO3 and AtKCO3::GFP are detected as homodimers upon velocity gradient centrifugation, an assembly state that would not allow for activity. We conclude that if AtKCO3 ever functions as a K+ channel, active tetramers are held by particularly weak interactions, are formed only in unknown specific conditions and may require partner proteins. KW - Arabidopsis KW - membrane proteins KW - potassium channels KW - protein assembly KW - tonoplast Y1 - 2012 U6 - https://doi.org/10.3389/fpls.2012.00251 SN - 1664-462X VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Lucia Gomez-Porras, Judith A1 - Mauricio Riano-Pachon, Diego A1 - Benito, Begona A1 - Haro, Rosario A1 - Sklodowski, Kamil A1 - Rodriguez-Navarro, Alonso A1 - Dreyer, Ingo T1 - Phylogenetic analysis of K+ transporters in bryophytes, lycophytes, and flowering plants indicates a specialization of vascular plants JF - Frontiers in plant science N2 - As heritage from early evolution, potassium (K+) is absolutely necessary for all living cells. It plays significant roles as stabilizer in metabolism and is important for enzyme activation, stabilization of protein synthesis, and neutralization of negative charges on cellular molecules as proteins and nucleic acids. Land plants even enlarged this spectrum of K+ utilization after having gone ashore, despite the fact that K+ is far less available in their new oligotrophic habitats than in sea water. Inevitably, plant cells had to improve and to develop unique transport systems for K+ accumulation and distribution. In the past two decades a manifold of K+ transporters from flowering plants has been identified at the molecular level. The recently published genome of the fern ally Selaginella moellendorffii now helps in providing a better understanding on the molecular changes involved in the colonization of land and the development of the vasculature and the seeds. In this article we present an inventory of K+ transporters of this lycophyte and pigeonhole them together with their relatives from the moss Physcomitrella patens, the monocotyledon Oryza sativa, and two dicotyledonous species, the herbaceous plant Arabidopsis thaliana, and the tree Populus trichocarpa. Interestingly, the transition of green plants from an aqueous to a dry environment coincides with a dramatic reduction in the diversity of voltage-gated potassium channels followed by a diversification on the basis of one surviving K+ channel class. The first appearance of K+ release (K-out) channels in S. moellendorffii that were shown in Arabidopsis to be involved in xylem loading and guard cell closure coincides with the specialization of vascular plants and may indicate an important adaptive step. KW - potassium KW - transport KW - channel KW - voltage-dependent KW - voltage-independent KW - high-affinity KW - Selaginella Y1 - 2012 U6 - https://doi.org/10.3389/fpls.2012.00167 SN - 1664-462X VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Christian, Jan-Ole A1 - Braginets, Rostyslav A1 - Schulze, Waltraud X. A1 - Walther, Dirk T1 - Characterization and prediction of protein phosphorylation hotspots in Arabidopsis thaliana JF - Frontiers in plant science N2 - The regulation of protein function by modulating the surface charge status via sequence-locally enriched phosphorylation sites (P-sites) in so called phosphorylation "hotspots" has gained increased attention in recent years. We set out to identify P-hotspots in the model plant Arabidopsis thaliana. We analyzed the spacing of experimentally detected P-sites within peptide-covered regions along Arabidopsis protein sequences as available from the PhosPhAt database. Confirming earlier reports (Schweiger and Lanial, 2010), we found that, indeed, P-sites tend to cluster and that distributions between serine and threonine P-sites to their respected closest next P-site differ significantly from those for tyrosine P-sites. The ability to predict P-hotspots by applying available computational P-site prediction programs that focus on identifying single P-sites was observed to be severely compromised by the inevitable interference of nearby P-sites. We devised a new approach, named HotSPotter, for the prediction of phosphorylation hotspots. HotSPotter is based primarily on local amino acid compositional preferences rather than sequence position-specific motifs and uses support vector machines as the underlying classification engine. HotSPotter correctly identified experimentally determined phosphorylation hotspots in A. thaliana with high accuracy. Applied to the Arabidopsis proteome, HotSPotter-predicted 13,677 candidate P-hotspots in 9,599 proteins corresponding to 7,847 unique genes. Hotspot containing proteins are involved predominantly in signaling processes confirming the surmised modulating role of hotspots in signaling and interaction events. Our study provides new bioinformatics means to identify phosphorylation hotspots and lays the basis for further investigating novel candidate P-hotspots. All phosphorylation hotspot annotations and predictions have been made available as part of the PhosPhAt database at http://phosphat.mpimp-golm.mpg.de. KW - protein phosphorylation KW - hotspots KW - Arabidopsis thaliana KW - support vector machines KW - regulation Y1 - 2012 U6 - https://doi.org/10.3389/fpls.2012.00207 SN - 1664-462X VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Balazadeh, Salma A1 - Jaspert, Nils A1 - Arif, Muhammad A1 - Müller-Röber, Bernd A1 - Maurino, Veronica G. T1 - Expression of ROS-responsive genes and transcription factors after metabolic formation of H2O2 in chloroplasts JF - Frontiers in plant science N2 - Glycolate oxidase (GO) catalyses the oxidation of glycolate to glyoxylate, thereby consuming O-2 and producing H2O2. In this work, Arabidopsis thaliana plants expressing GO in the chloroplasts (GO plants) were used to assess the expressional behavior of reactive oxygen species (ROS)-responsive genes and transcription factors (TFs) after metabolic induction of H2O2 formation in chloroplasts. In this organelle, GO uses the glycolate derived from the oxygenase activity of RubisCO. Here, to identify genes responding to an abrupt production of H2O2 in chloroplasts we used quantitative real-time PCR (qRT-PCR) to test the expression of 187 ROS-responsive genes and 1880 TFs after transferring GO and wild-type (WT) plants grown at high CO2 levels to ambient CO2 concentration. Our data revealed coordinated expression changes of genes of specific functional networks 0.5 h after metabolic induction of H2O2 production in GO plants, including the induction of indole glucosinolate and camalexin biosynthesis genes. Comparative analysis using available microarray data suggests that signals for the induction of these genes through H2O2 may originate in the chloroplast. The TF profiling indicated an up-regulation in GO plants of a group of genes involved in the regulation of proanthocyanidin and anthocyanin biosynthesis. Moreover, the upregulation of expression of IF and IF interacting proteins affecting development (e.g., cell division, stem branching, flowering time, flower development) would impact growth and reproductive capacity, resulting in altered development under conditions that promote the formation of H2O2. KW - glycolate oxidase KW - H2O2 KW - ROS-responsive genes KW - transcription factors Y1 - 2012 U6 - https://doi.org/10.3389/fpls.2012.00234 SN - 1664-462X VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Spijkerman, Elly A1 - Wacker, Alexander A1 - Weithoff, Guntram A1 - Leya, Thomas T1 - Elemental and fatty acid composition of snow algae in Arctic habitats JF - Frontiers in microbiology N2 - Red, orange or green snow is the macroscopic phenomenon comprising different eukaryotic algae. Little is known about the ecology and nutrient regimes in these algal communities. Therefore, eight snow algal communities from five intensively tinted snow fields in western Spitsbergen were analysed for nutrient concentrations and fatty acid (FA) composition. To evaluate the importance of a shift from green to red forms on the FA-variability of the field samples, four snow algal strains were grown under nitrogen replete and moderate light (+N+ML) or N-limited and high light (-N+HL) conditions. All eight field algal communities were dominated by red and orange cysts. Dissolved nutrient concentration of the snow revealed a broad range of NH4+ (<0.005-1.2 mg NI-1) and only low PO43- (< 18 mu g P I-1) levels. The external nutrient concentration did not reflect cellular nutrient ratios as C:N and C:P ratios of the communities were highest at locations containing relatively high concentrations of NH4- and PO43-. Molar N:P ratios ranged from 11 to 21 and did not suggest clear limitation of a single nutrient. On a per carbon basis, we found a 6-fold difference in total FA content between the eight snow algal communities, ranging from 50 to 300 mg FA g C-1. In multivariate analyses total FA content opposed the cellular N:C quota and a large part of the FA variability among field locations originated from the abundant FAs C181n-9, C18 2n-6, and C183n-3. Both field samples and snow algal strains grown under -N+HL conditions had high concentrations of C181n-9. FAs possibly accumulated due to the cessation of growth. Differences in color and nutritional composition between patches of snow algal communities within one snow field were not directly related to nutrient conditions. We propose that the highly patchy distribution of snow algae within and between snow fields may also result from differences in topographical and geological parameters such as slope, melting water rivulets, and rock formation. KW - Arctic snow algal bloom KW - cellular C:N:P ratio KW - ecology KW - extremophiles KW - lipids KW - nutrients KW - psychrophilic. KW - Spitsbergen Y1 - 2012 U6 - https://doi.org/10.3389/fmicb.2012.00380 SN - 1664-302X VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Sauer, Patrick A1 - Glombitza, Clemens A1 - Kallmeyer, Jens T1 - A system for incubations at high gas partial pressure JF - Frontiers in microbiology N2 - High-pressure is a key feature of deep subsurface environments. High partial pressure of dissolved gasses plays an important role in microbial metabolism, because thermodynamic feasibility of many reactions depends on the concentration of reactants. For gases, this is controlled by their partial pressure, which can exceed 1 MPa at in situ conditions. Therefore, high hydrostatic pressure alone is not sufficient to recreate true deep subsurface in situ conditions, but the partial pressure of dissolved gasses has to be controlled as well. We developed an incubation system that allows for incubations at hydrostatic pressure up to 60 MPa, temperatures up to 120 degrees C, and at high gas partial pressure. The composition and partial pressure of gasses can be manipulated during the experiment. To keep costs low, the system is mainly made from off-the-shelf components with only very few custommade parts. A flexible and inert PVDF (polyvinylidene fluoride) incubator sleeve, which is almost impermeable for gases, holds the sample and separates it from the pressure fluid. The flexibility of the incubator sleeve allows for sub-sampling of the medium without loss of pressure. Experiments can be run in both static and flow-through mode. The incubation system described here is usable for versatile purposes, not only the incubation of microorganisms and determination of growth rates, but also for chemical degradation or extraction experiments under high gas saturation, e.g., fluid-gas-rock-interactions in relation to carbon dioxide sequestration. As an application of the system we extracted organic compounds from sub-bituminous coal using H2O as well as a H2O-CO2 mixture at elevated temperature (90 degrees C) and pressure (5 MPa). Subsamples were taken at different time points during the incubation and analyzed by ion chromatography. Furthermore we demonstrated the applicability of the system for studies of microbial activity, using samples from the Isis mud volcano. We could detect an increase in sulfate reduction rate upon the addition of methane to the sample. KW - high-pressure incubation system KW - gas partial pressure KW - sub-sampling KW - carbon dioxide KW - low molecular weight organic acids Y1 - 2012 U6 - https://doi.org/10.3389/fmicb.2012.00025 SN - 1664-302X VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Bickel, Samantha L. A1 - Tang, Kam W. A1 - Grossart, Hans-Peter T1 - Ciliate epibionts associated with crustacean zooplankton in German lakes - distribution, motility, and bacterivory JF - Frontiers in microbiology N2 - Ciliate epibionts associated with crustacean zooplankton are widespread in aquatic systems, but their ecological roles are little known. We studied the occurrence of ciliate epibionts on crustacean zooplankton in nine German lakes with different limnological features during the summer of 2011. We also measured the detachment and re-attachment rates of the ciliates, changes in their motility, and the feeding rates of attached vs. detached ciliate epibionts. Epibionts were found in all lakes sampled except an acidic lake with large humic inputs. Epibiont prevalence was as high as 80.96% on the cladoceran Daphnia cucullata, 67.17% on the cladoceran Diaphanosoma brachyurum, and 46.67% on the calanoid copepod Eudiaptomus gracilis. Both cladoceran groups typically had less than 10 epibionts per individual, while the epibiont load on E. gracilis ranged from 1 to >30 epibionts per individual. After the death of the zooplankton host, the peritrich ciliate epibiont Epistylis sp. detached in an exponential fashion with a half-life of 5 min, and 98% detached within 30 min, leaving behind the stalks used for attachment. Immediately after detachment, the ciliates were immotile, but 62% became motile within 60 min. When a new host was present, only 27% reattached after 120 min. The average measured ingestion rate and clearance rate of Epistylis were 11,745 bacteria ciliate(-1) h(-1) and 24.33 mu l ciliate(-1) h(-1), respectively. Despite their high feeding rates, relatively low epibiont abundances were observed in the field, which suggests either diversion of energy to stalk formation, high metabolic loss by the epibionts, or high mortality among the epibiont populations. KW - ciliate epibionts KW - Epistylis KW - crustacean zooplankton KW - bacterivory KW - epibiont motility Y1 - 2012 U6 - https://doi.org/10.3389/fmicb.2012.00243 SN - 1664-302X VL - 3 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Mengel, Matthias A1 - Levermann, Anders A1 - Schleussner, Carl-Friedrich A1 - Born, Andreas T1 - Enhanced Atlantic subpolar gyre variability through baroclinic threshold in a coarse resolution model JF - Earth system dynamics N2 - Direct observations, satellite measurements and paleo records reveal strong variability in the Atlantic subpolar gyre on various time scales. Here we show that variations of comparable amplitude can only be simulated in a coupled climate model in the proximity of a dynamical threshold. The threshold and the associated dynamic response is due to a positive feedback involving increased salt transport in the subpolar gyre and enhanced deep convection in its centre. A series of sensitivity experiments is performed with a coarse resolution ocean general circulation model coupled to a statistical-dynamical atmosphere model which in itself does not produce atmospheric variability. To simulate the impact of atmospheric variability, the model system is perturbed with freshwater forcing of varying, but small amplitude and multi-decadal to centennial periodicities and observational variations in wind stress. While both freshwater and wind-stress-forcing have a small direct effect on the strength of the subpolar gyre, the magnitude of the gyre's response is strongly increased in the vicinity of the threshold. Our results indicate that baroclinic self-amplification in the North Atlantic ocean can play an important role in presently observed SPG variability and thereby North Atlantic climate variability on multi-decadal scales. Y1 - 2012 U6 - https://doi.org/10.5194/esd-3-189-2012 SN - 2190-4979 SN - 2190-4987 VL - 3 IS - 2 SP - 189 EP - 197 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Lauterbach, Daniel A1 - Ristow, Michael A1 - Gemeinholzer, Birgit T1 - Population genetics and fitness in fragmented populations of the dioecious and endangered Silene otites (Caryophyllaceae) JF - Plant systematics and evolution N2 - Population fragmentation is often correlated with loss of genetic diversity and reduced fitness. Obligate out-crossing (dioecy) is expected to enhance genetic diversity, reduce genetic differentiation, and avoid inbreeding depression through frequent gene flow. However, in highly fragmented populations dioecy has only diminishing effects upon genetic structure as pollination limitations (e.g. flight distance of pollinators) most often restrict inter-population gene flow in insect pollinated species. In fragmented dry grasslands in northeastern Germany, we analysed genetic structure, fitness, and habitat quality of the endangered dioecious Silene otites (Caryophyllaceae). Using AFLP markers, a high level of differentiation among ten populations was found (F (st) = 0.36), while the intra-population genetic diversities (H (E) = 0.165-0.240) were similar as compared to hermaphroditic species. There was neither a correlation between geographic and genetic distance nor between genetic diversity and population size, which indicates reduced gene flow among populations and random genetic drift. Plant size was positively correlated with genetic diversity. Seed set and number of juveniles were positively related to population size. Higher total coverage resulted in reduced plant fitness, and the number of juveniles was negatively correlated to cryptogam cover. Additionally, we found a sex ratio bias towards more male plants in larger populations. Overall, our results indicate that on a regional geographic scale dioecy does not necessarily prevent genetic erosion in the case of habitat fragmentation, especially in the absence of long distance seed and pollen dispersal capacity. KW - AFLP KW - Population size KW - Mating system KW - Isolation by distance KW - Sex ratio Y1 - 2012 U6 - https://doi.org/10.1007/s00606-011-0533-0 SN - 0378-2697 VL - 298 IS - 1 SP - 155 EP - 164 PB - Springer CY - Wien ER - TY - JOUR A1 - Araujo, Wagner L. A1 - Nunes-Nesi, Adriano A1 - Nikoloski, Zoran A1 - Sweetlove, Lee J. A1 - Fernie, Alisdair R. T1 - Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues JF - Plant, cell & environment : cell physiology, whole-plant physiology, community physiology N2 - The tricarboxylic acid (TCA) cycle is a crucial component of respiratory metabolism in both photosynthetic and heterotrophic plant organs. All of the major genes of the tomato TCA cycle have been cloned recently, allowing the generation of a suite of transgenic plants in which the majority of the enzymes in the pathway are progressively decreased. Investigations of these plants have provided an almost complete view of the distribution of control in this important pathway. Our studies suggest that citrate synthase, aconitase, isocitrate dehydrogenase, succinyl CoA ligase, succinate dehydrogenase, fumarase and malate dehydrogenase have control coefficients flux for respiration of -0.4, 0.964, -0.123, 0.0008, 0.289, 0.601 and 1.76, respectively; while 2-oxoglutarate dehydrogenase is estimated to have a control coefficient of 0.786 in potato tubers. These results thus indicate that the control of this pathway is distributed among malate dehydrogenase, aconitase, fumarase, succinate dehydrogenase and 2-oxoglutarate dehydrogenase. The unusual distribution of control estimated here is consistent with specific non-cyclic flux mode and cytosolic bypasses that operate in illuminated leaves. These observations are discussed in the context of known regulatory properties of the enzymes and some illustrative examples of how the pathway responds to environmental change are given. KW - metabolic control analysis KW - metabolic regulation KW - respiration KW - Solanum lycopersicum (tomato) KW - TCA cycle Y1 - 2012 U6 - https://doi.org/10.1111/j.1365-3040.2011.02332.x SN - 0140-7791 VL - 35 IS - 1 SP - 1 EP - 21 PB - Wiley-Blackwell CY - Hoboken ER - TY - JOUR A1 - Stojanovic, Milovan A1 - Markovic, Rade A1 - Kleinpeter, Erich A1 - Baranac-Stojanovic, Marija T1 - Synthesis of thiazolidine-fused heterocycles via exo-mode cyclizations of vinylogous N-acyliminium ions JF - Organic & biomolecular chemistry : an international journal of synthetic, physical and biomolecular organic chemistry N2 - Syntheses of thiazolidine-fused heterocycles via exo-mode cyclizations of vinylogous N-acyliminium ions incorporating heteroatom-based nucleophiles have been examined and discussed. The formation of (5,6)-membered systems was feasible with all nucleophiles tried (O, S and N), while the closing of the five-membered ring was restricted to O- and S-nucleophiles. The closure of a four-membered ring failed. Instead, the bicyclic (5,6)-membered acetal derivative and the tricyclic system with an eight-membered central ring were obtained from the substrates containing O and S nucleophilic moieties, respectively. The reaction outcome and stereochemistry are rationalized using quantum chemical calculations at B3LYP/6-31G(d) level. The exclusive cis-stereoselectivity in the formation of (5,6)- and (5,5)-membered systems results from thermodynamic control, whereas the formation of the eight-membered ring was kinetically controlled. Y1 - 2012 U6 - https://doi.org/10.1039/c1ob06451g SN - 1477-0520 VL - 10 IS - 3 SP - 575 EP - 589 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Graae, Bente J. A1 - De Frenne, Pieter A1 - Kolb, Annette A1 - Brunet, Jorg A1 - Chabrerie, Olivier A1 - Verheyen, Kris A1 - Pepin, Nick A1 - Heinken, Thilo A1 - Zobel, Martin A1 - Shevtsova, Anna A1 - Nijs, Ivan A1 - Milbau, Ann T1 - On the use of weather data in ecological studies along altitudinal and latitudinal gradients JF - Oikos N2 - Global warming has created a need for studies along climatic gradients to assess the effects of temperature on ecological processes. Altitudinal and latitudinal gradients are often used as such, usually in combination with air temperature data from the closest weather station recorded at 1.52 m above the ground. However, many ecological processes occur in, at, or right above the soil surface. To evaluate how representative the commonly used weather station data are for the microclimate relevant for soil surface biota, we compared weather station temperatures for an altitudinal (500900 m a.s.l.) and a latitudinal gradient (4968 degrees N) with data obtained by temperature sensors placed right below the soil surface at five sites along these gradients. The mean annual temperatures obtained from weather stations and adjusted using a lapse rate of -5.5 degrees C km-1 were between 3.8 degrees C lower and 1.6 degrees C higher than those recorded by the temperature sensors at the soil surface, depending on the position along the gradients. The monthly mean temperatures were up to 10 degrees C warmer or 5 degrees C colder at the soil surface. The within-site variation in accumulated temperature was as high as would be expected from a 300 m change in altitude or from a 4 degrees change in latitude or a climate change scenario corresponding to warming of 1.63.8 degrees C. Thus, these differences introduced by the decoupling are significant from a climate change perspective, and the results demonstrate the need for incorporating microclimatic variation when conducting studies along altitudinal or latitudinal gradients. We emphasize the need for using relevant temperature data in climate impact studies and further call for more studies describing the soil surface microclimate, which is crucial for much of the biota. Y1 - 2012 U6 - https://doi.org/10.1111/j.1600-0706.2011.19694.x SN - 0030-1299 VL - 121 IS - 1 SP - 3 EP - 19 PB - Wiley-Blackwell CY - Hoboken ER - TY - JOUR A1 - Wojcinski, Sebastian A1 - Cassel, Michael A1 - Farrokh, Andre A1 - Soliman, Amr A. A1 - Hille, Ursula A1 - Schmidt, Werner A1 - Degenhardt, Friedrich A1 - Hillemanns, Peter T1 - Variations in the elasticity of breast tissue during the menstrual cycle determined by real-time sonoelastography JF - Journal of ultrasound in medicine N2 - Objectives-The purpose of this study was to determine the dependence of breast tissue elasticity on the menstrual cycle of healthy volunteers by means of real-time sonoelastography. Methods-Twenty-two healthy volunteers (aged 18-33 years) were examined once weekly during two consecutive menstrual cycles using sonoelastography. Group 1 (n = 10) was not taking hormonal medication; group 2 (n = 12) was taking oral contraceptives. Results-The breast parenchyma appeared softer than the dermis and harder than the adipose tissue, and elasticity varied over the menstrual cycle and between groups. Group 1 (no hormone intake) showed continuously increasing elasticity with relatively soft breast parenchyma in the menstrual and follicular phases and harder parenchyma in the luteal phase (P = .012). Group 2 (oral contraceptives) showed no statistically significant changes in breast parenchymal elasticity according to sonoelastography. The parenchyma was generally softer in group 1 compared with group 2 throughout the menstrual cycle (P = .033). The dermis, the subcutaneous adipose tissue, and the pectoralis major muscle showed no changes in elasticity. Comparison of measurements made during the first and the second menstrual cycles showed similar patterns of elasticity in both groups. Conclusions-Sonoelastography is a reproducible method that can be used to determine the dependence of breast parenchyma elasticity on the menstrual cycle and on the intake of hormonal contraceptives. KW - breast tissue KW - elasticity imaging KW - real-time tissue elastography KW - sonoelastography Y1 - 2012 SN - 0278-4297 SN - 1550-9613 VL - 31 IS - 1 SP - 63 EP - 72 PB - American Institute of Ultrasound in Medicine CY - Laurel ER - TY - JOUR A1 - Rudolph, Nicole A1 - Esser, Hanna G. A1 - Carminati, Andrea A1 - Moradi, Ahmad B. A1 - Hilger, Andre A1 - Kardjilov, Nikolay A1 - Nagl, Stefan A1 - Oswald, Sascha T1 - Dynamic oxygen mapping in the root zone by fluorescence dye imaging combined with neutron radiography JF - Journal of soils and sediments : protection, risk assessment and remediation N2 - The rooted zone of a soil, more precisely the rhizosphere, is a very dynamic system. Some of the key processes are water uptake and root respiration. We have developed a novel method for measuring the real-time distribution of water and oxygen concentration in the rhizosphere as a biogeochemical interface in soil. This enables understanding where and when roots are active in respect to root respiration and water uptake and how the soil responds to it. We used glass containers (15 x 15 x 1 cm), which were filled with a quartz sand mixture. Sensor foils for fluorescence dye imaging of O-2 were installed on the inner side of the containers. A lupine plant was grown in each container for 2 weeks under controlled conditions. Then we took time series of fluorescence images for time-lapsed visualization of oxygen depletion caused by root respiration. Changing water content was mapped in parallel by non-invasive neutron radiography, which yields water content distributions in high spatial resolution. Also it can detect the root system of the lupine plants. By this combined imaging of the samples, a range of water contents and different oxygen concentration levels, both induced by root activities, could be assessed. We monitored the dynamics of these vital parameters induced by roots during a period of several hours. We observed that for high water saturation, the oxygen concentration decreased in parts of the container. The accompanying neutron radiographies gave us the information that these locations are spatially correlated to roots. Therefore, it can be concluded that the observed oxygen deficits close to the roots result from root respiration and show up while re-aeration from atmosphere by gas phase transport is restricted by the high water saturation. Our coupled imaging setup was able to monitor the spatial distribution and temporal dynamics of oxygen and water content in a night and day cycle. This reflects complex plant activities such as photosynthesis, transpiration, and metabolic activities impacting the root-soil interface. Our experimental setup provides the possibility to non-invasively visualize these parameters with high resolution. The particular oxygen imaging method as well as the combination with simultaneously mapping the water content by neutron radiography is a novelty. KW - Fluorescence imaging KW - Neutron radiography KW - Oxygen mapping KW - Rhizosphere KW - Root respiration KW - Water distribution Y1 - 2012 U6 - https://doi.org/10.1007/s11368-011-0407-7 SN - 1439-0108 VL - 12 IS - 1 SP - 63 EP - 74 PB - Springer CY - Heidelberg ER - TY - JOUR A1 - Herfurth, Christoph A1 - Voll, Dominik A1 - Buller, Jens A1 - Weiss, Jan A1 - Barner-Kowollik, Christopher A1 - Laschewsky, André T1 - Radical addition fragmentation chain transfer (RAFT) polymerization of ferrocenyl (meth)acrylates JF - Journal of polymer science : A, Polymer chemistry N2 - We report on the controlled free radical homopolymerization of 1-ferrocenylethyl acrylate as well as of three new ferrocene bearing monomers, namely 4-ferrocenylbutyl acrylate, 2-ferrocenylamido-2-methylpropyl acrylate, and 4-ferrocenylbutyl methacrylate, by the RAFT technique. For comparison, the latter monomer was polymerized using ATRP, too. The ferrocene containing monomers were found to be less reactive than their analogues free of ferrocene. The reasons for the low polymerizability are not entirely clear. As the addition of free ferrocene to the reaction mixture did not notably affect the polymerizations, sterical hindrance by the bulky ferrocene moiety fixed on the monomers seems to be the most probable explanation. Molar masses found for 1-ferrocenylethyl acrylate did not exceed 10,000 g mol(-1), while for 4-ferrocenylbutyl (meth) acrylate molar masses of 15,000 g mol(-1) could be obtained. With PDIs as low as 1.3 in RAFT polymerization of the monomers, good control over the polymerization was achieved. KW - ferrocene KW - living radical polymerization (LRP) KW - monomers KW - radical addition fragmentation chain transfer (RAFT) KW - radical polymerization KW - redox polymers KW - synthesis Y1 - 2012 U6 - https://doi.org/10.1002/pola.24994 SN - 0887-624X VL - 50 IS - 1 SP - 108 EP - 118 PB - Wiley-Blackwell CY - Malden ER - TY - JOUR A1 - Baur, Heiner A1 - Hirschmüller, Anja A1 - Müller, Steffen A1 - Cassel, Michael A1 - Mayer, Frank T1 - Is EMG of the lower leg dependent on weekly running mileage? JF - International journal of sports medicine N2 - Neuromuscular activity of the lower leg is dependent on the task performed, speed of movement and gender. Whether training volume influences neuromuscular activity is not known. The EMG of physically active persons differing in running mileage was analysed to investigate this. 55 volunteers were allocated to a low (LM: < 30 km), intermediate (IM: > 30 km & < 45 km) or high mileage (HM: > 45 km) group according to their weekly running volume. Neuromuscular activity of the lower leg was measured during running (3.33 m.s(-1)). Mean amplitude values for preactivation, weight acceptance and push-off were calculated and normalised to the mean activity of the entire gait cycle. Higher activity in the gastrocnemius group was observed in weight acceptance in LM compared to IM (+30%) and HM (+25%) but lower activity was present in the push-off for LM compared to IM and HM. For the peroneal muscle, differences were present in the push-off where HM showed increased activity compared to IM (+24%) and LM (+60%). The tibial muscle revealed slightly lower activity during preactivation for the high mileage runners. Neuromuscular activity differs during stance between the high and intermediate group compared to low mileage runners. Slight adaptations in neuromuscular activation indicate a more target-oriented activation strategy possibly due to repetitive training in runners with higher weekly mileage. KW - locomotion KW - neuromuscular control KW - running gait KW - training volume Y1 - 2012 U6 - https://doi.org/10.1055/s-0031-1286250 SN - 0172-4622 VL - 33 IS - 1 SP - 53 EP - 57 PB - Thieme CY - Stuttgart ER - TY - JOUR A1 - Quasthoff, Matthias A1 - Meinel, Christoph T1 - Supporting object-oriented programming of semantic-web software JF - IEEE transactions on systems, man, and cybernetics : Part C, Applications and reviews N2 - This paper presents the state of the art in the development of Semantic-Web-enabled software using object-oriented programming languages. Object triple mapping (OTM) is a frequently used method to simplify the development of such software. A case study that is based on interviews with developers of OTM frameworks is presented at the core of this paper. Following the results of the case study, the formalization of OTM is kept separate from optional but desirable extensions of OTM with regard to metadata, schema matching, and integration into the Semantic-Web infrastructure. The material that is presented is expected to not only explain the development of Semantic-Web software by the usage of OTM, but also explain what properties of Semantic-Web software made developers come up with OTM. Understanding the latter will be essential to get nonexpert software developers to use Semantic-Web technologies in their software. KW - Resource description framework KW - Software KW - Java KW - Data models KW - Programming KW - Interviews Y1 - 2012 U6 - https://doi.org/10.1109/TSMCC.2011.2151282 SN - 1094-6977 VL - 42 IS - 1 SP - 15 EP - 24 PB - Inst. of Electr. and Electronics Engineers CY - Piscataway ER - TY - JOUR A1 - Lauterbach, Daniel A1 - Burkart, Michael A1 - Gemeinholzer, Birgit T1 - Rapid genetic differentiation between ex situ and their in situ source populations - an example of the endangered Silene otites (Caryophyllaceae) JF - Botanical journal of the Linnean Society N2 - Ex situ cultivation in botanic gardens could be one possibility to preserve plant species diversity and genetic variation. However, old ex situ populations are often sparsely documented. We were able to retrieve three different ex situ populations and their source in situ populations of the endangered plant species Silene otites after 20-36 years of isolation. Furthermore, three additional wild populations were included in the analysis. Population genetic diversity and differentiation were analysed using AFLP markers. Genetic variation in the ex situ populations was lower than the variation found in the in situ populations. Strong differentiation (F-ST = 0.21-0.36) between corresponding in situ and ex situ populations was observed. Bayesian clustering approach also showed a distinct genetic separation between in situ and ex situ populations. The high genetic differentiation and loss of genetic diversity during spatial and temporal isolation in the ex situ populations can be attributable to small population sizes and unconscious selection during cultivation. Therefore, adequate sampling prior to ex situ cultivation and large effective population sizes are important to preserve genetic diversity. Near-natural cultivation allowing for generation overlap and interspecific competition without artificial selection is recommended as being best for the maintenance of the genetic constitution. KW - AFLP KW - botanical garden KW - conservation genetics KW - founder effect KW - population size Y1 - 2012 U6 - https://doi.org/10.1111/j.1095-8339.2011.01185.x SN - 0024-4074 VL - 168 IS - 1 SP - 64 EP - 75 PB - Wiley-Blackwell CY - Hoboken ER - TY - JOUR A1 - Kern, Jürgen A1 - Hellebrand, Hans Jürgen A1 - Gömmel, Michael A1 - Ammon, Christian A1 - Berg, Werner T1 - Effects of climatic factors and soil management on the methane flux in soils from annual and perennial energy crops JF - Biology and fertility of soils N2 - Methane flux rates were measured on a loamy sand soil within perennial and annual energy crops in northeast Germany. The study was performed in closed chambers between 2003 and 2005 with four measurements per week. A mixed linear model including the fixed effects of year, rotation period, crop and fertilisation was applied to determine the influence of climatic factors and soil management on the CH4 flux. Soil water content and air temperature were added as co-variables. With the exception of air temperature, all fixed effects and the co-variable soil water content influenced the CH4 flux. The soil of annual crops consumed 6.1 mu g CH4 m(-2) h(-1), significantly more than the soil of perennial crops with 4.3 mu g CH4 m(-2) h(-1). It is suggested that soil water content plays the key role in CH4 flux between pedosphere and atmosphere. In the range of water contents between 5% and 15%, our model describes that a soil water content increase of 1% induces a net emission of 0.375 mu g CH4 m(-2) h(-1). As the soil of the experimental field was well-drained and aerobic, it represented a net sink for CH4 throughout the study period. KW - Methane oxidation KW - ANCOVA model KW - Soil water KW - Fertilisation KW - Greenhouse gases KW - Energy crops Y1 - 2012 U6 - https://doi.org/10.1007/s00374-011-0603-z SN - 0178-2762 VL - 48 IS - 1 SP - 1 EP - 8 PB - Springer CY - New York ER - TY - JOUR A1 - Khuroo, Anzar A. A1 - Reshi, Zafar A. A1 - Malik, Akhtar H. A1 - Weber, Ewald A1 - Rashid, Irfan A1 - Dar, G. H. T1 - Alien flora of India taxonomic composition, invasion status and biogeographic affiliations JF - Biological invasions : unique international journal uniting scientists in the broad field of biological invasions N2 - The wide knowledge gaps in invasion biology research that exist in the developing world are crucial impediments to the scientific management and global policymaking on biological invasions. In an effort to fill such knowledge gaps, we present here an inventory of the alien flora of India, based on systematic reviews and rigorous analyses of research studies (ca. 190) published over the last 120 years (1890-2010 AD), and updated with field records of the last two decades. Currently, the inventory comprises of 1,599 species, belonging to 842 genera in 161 families, and constitutes 8.5% of the total Indian vascular flora. The three most species-rich families are Asteraceae (134 spp.), Papilionaceae (114 spp.) and Poaceae (106 spp.), and the three largest genera are Eucalyptus (25 spp.), Ipomoea (22 spp.), and Senna (21 spp.). The majority of these species (812) have no report of escaping from cultivation. Of the remaining subset of 787 species, which have either escaped from intentional cultivation, or spread after unintentional introduction, casuals are represented by 57 spp., casual/naturalised by 114 spp., naturalised by 257 spp., naturalised/invasive by 134 spp., and invasive by 225 spp. Biogeographically, more than one-third (35%) of the alien flora in India has its native ranges in South America, followed by Asia (21%), Africa (20%), Europe (11%), Australia (8%), North America (4%); and cryptogenic (1%). The inventory is expected to serve as the scientific baseline on plant invasions in India, with implications for conservation of global biodiversity. KW - Biodiversity KW - Biological invasions KW - Alien plants KW - Taxonomy KW - Biogeography KW - India Y1 - 2012 U6 - https://doi.org/10.1007/s10530-011-9981-2 SN - 1387-3547 VL - 14 IS - 1 SP - 99 EP - 113 PB - Springer CY - Dordrecht ER - TY - JOUR A1 - Yarman, Aysu A1 - Gröbe, Glenn A1 - Neumann, Bettina A1 - Kinne, Mathias A1 - Gajovic-Eichelmann, Nenad A1 - Wollenberger, Ursula A1 - Hofrichter, Martin A1 - Ullrich, Rene A1 - Scheibner, Katrin A1 - Scheller, Frieder W. T1 - The aromatic peroxygenase from Marasmius rutola-a new enzyme for biosensor applications JF - Analytical & bioanalytical chemistry N2 - The aromatic peroxygenase (APO; EC 1.11.2.1) from the agraric basidomycete Marasmius rotula (MroAPO) immobilized at the chitosan-capped gold-nanoparticle-modified glassy carbon electrode displayed a pair of redox peaks with a midpoint potential of -278.5 mV vs. AgCl/AgCl (1 M KCl) for the Fe(2+)/Fe(3+) redox couple of the heme-thiolate-containing protein. MroAPO oxidizes aromatic substrates such as aniline, p-aminophenol, hydroquinone, resorcinol, catechol, and paracetamol by means of hydrogen peroxide. The substrate spectrum overlaps with those of cytochrome P450s and plant peroxidases which are relevant in environmental analysis and drug monitoring. In M. rotula peroxygenase-based enzyme electrodes, the signal is generated by the reduction of electrode-active reaction products (e.g., p-benzoquinone and p-quinoneimine) with electro-enzymatic recycling of the analyte. In these enzyme electrodes, the signal reflects the conversion of all substrates thus representing an overall parameter in complex media. The performance of these sensors and their further development are discussed. KW - Unspecific peroxygenase KW - Cytochrome P450 KW - Biosensors KW - Phenolic substances Y1 - 2012 U6 - https://doi.org/10.1007/s00216-011-5497-y SN - 1618-2642 VL - 402 IS - 1 SP - 405 EP - 412 PB - Springer CY - Heidelberg ER - TY - JOUR A1 - Türke, Manfred A1 - Andreas, Kerstin A1 - Gossner, Martin M. A1 - Kowalski, Esther A1 - Lange, Markus A1 - Boch, Steffen A1 - Socher, Stephanie A. A1 - Müller, Jörg A1 - Prati, Daniel A1 - Fischer, Markus A1 - Meyhöfer, Rainer A1 - Weisser, Wolfgang W. T1 - Are gastropods, rather than ants, important dispersers of seeds of myrmecochorous forest herbs? JF - The American naturalist : a bi-monthly journal devoted to the advancement and correlation of the biological sciences N2 - Seed dispersal by ants (myrmecochory) is widespread, and seed adaptations to myrmecochory are common, especially in the form of fatty appendices (elaiosomes). In a recent study, slugs were identified as seed dispersers of myrmecochores in a central European beech forest. Here we used 105 beech forest sites to test whether myrmecochore presence and abundance is related to ant or gastropod abundance and whether experimentally exposed seeds are removed by gastropods. Myrmecochorous plant cover was positively related to gastropod abundance but was negatively related to ant abundance. Gastropods were responsible for most seed removal and elaiosome damage, whereas insects (and rodents) played minor roles. These gastropod effects on seeds were independent of region or forest management. We suggest that terrestrial gastropods can generally act as seed dispersers of myrmecochorous plants and even substitute myrmecochory, especially where ants are absent or uncommon. KW - myrmecochory KW - gastropodochory KW - Arion KW - slug KW - seed dispersal Y1 - 2012 U6 - https://doi.org/10.1086/663195 SN - 0003-0147 VL - 179 IS - 1 SP - 124 EP - 131 PB - Univ. of Chicago Press CY - Chicago ER - TY - JOUR A1 - Vukicevic, Radovan A1 - Schwadtke, Ulrike A1 - Schmuecker, Simon A1 - Schaefer, Philipp A1 - Kuckling, Dirk A1 - Beuermann, Sabine T1 - Alkyne-azide coupling of tailored poly(vinylidene fluoride) and polystyrene for the synthesis of block copolymers JF - Polymer Chemistry N2 - The synthesis of block copolymers consisting of poly(vinylidene fluoride) (PVDF) and polystyrene (PS) is reported. Firstly, a propargyl-functionalized alkoxyamine initiator (PgOTIPNO) was prepared and subsequently used for the preparation of a propargyl-terminated PS homopolymer of different chain lengths with low dispersities via nitroxide-mediated radical polymerization. A tailored PVDF homopolymer with iodine end groups originating from iodine transfer polymerization was transformed to PVDF with azide end group. Then, alkyne-terminated PS with different molecular weights and azide-terminated PVDF were joined together via copper-catalyzed alkyne-azide coupling. The block copolymers were characterized using H-1-NMR, F-19-NMR, IR, SEC, and DSC. Y1 - 2012 U6 - https://doi.org/10.1039/c1py00427a SN - 1759-9954 VL - 3 IS - 2 SP - 409 EP - 414 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Weiss, Jan A1 - Li, Ang A1 - Wischerhoff, Erik A1 - Laschewsky, André T1 - Water-soluble random and alternating copolymers of styrene monomers with adjustable lower critical solution temperature JF - Polymer Chemistry N2 - Random copolymers of 4-vinylbenzyl tri(oxyethylene) and tetra(oxyethylene) ethers, as well as alternating copolymers of 4-vinylbenzyl methoxytetra(oxyethylene) ether and a series of N-substituted maleimides, were synthesised by conventional free radical polymerisation, reversible addition fragmentation chain transfer (RAFT) and atom transfer radical polymerisation (ATRP). Their thermosensitive behaviour in aqueous solution was studied by turbidimetry and dynamic light scattering. Depending on the copolymer composition, a LCST type phase transition was observed in water. The transition temperature of the obtained random as well as alternating copolymers could be varied within a broad temperature window. In the case of the random copolymers, transition temperatures could be easily fine-tuned, as they showed a linear dependence on the copolymer composition, and were additionally modified by the nature of the polymer end-groups. Alternating copolymers were extremely versatile for implementing a broad range of variations of the phase transition temperatures. Further, while alternating copolymers derived from 4-vinylbenzyl methoxytetra(oxyethylene) ether and maleimides with small hydrophobic side chains underwent macroscopic phase separation when dissolved in water and heated above their cloud point, the incorporation of maleimides bearing larger hydrophobic substituents resulted in the formation of mesoglobules above the phase transition temperature, with hydrodynamic diameters of less than 100 nm. Y1 - 2012 U6 - https://doi.org/10.1039/c1py00422k SN - 1759-9954 VL - 3 IS - 2 SP - 352 EP - 361 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Heuer, Axel A1 - Sagahti, A. A1 - Jechow, Andreas A1 - Skoczowsky, D. A1 - Menzel, Ralf T1 - Multi-wavelength, high spatial brightness operation of a phase-locked stripe-array diode laser JF - Laser physics N2 - Stable continuous wave multi-wavelength operation of a stripe-array diode laser with an externalcavity spectral beam combining geometry is presented. In this setup each emitter of the stripe-array is forced to operate at a different wavelength, which leads to a decoupling between the usually phase-locked emitters. With a reflective diffraction grating with a period of 300 lines per mm, 33 equidistant laser lines around a center wavelength of 978 nm were realized, spanning a spectral range of 26 nm. With this novel approach near-diffraction limited emission with a beam quality of M (2) < 1.2 and an output power of 450 mW was achieved. This laser light source can be used for applications requiring low temporal but high spatial coherence. Y1 - 2012 U6 - https://doi.org/10.1134/S1054660X12010057 SN - 1054-660X VL - 22 IS - 1 SP - 160 EP - 164 PB - Pleiades Publ. CY - New York ER - TY - JOUR A1 - Ziege, Madlen A1 - Hennige-Schulz, Carmen A1 - Muecksch, Frauke A1 - Bierbach, David A1 - Tiedemann, Ralph A1 - Streit, Bruno A1 - Plath, Martin T1 - A comparison of two methods to assess audience-induced changes in male mate choice JF - Current zoology N2 - Multidirectional communicative interactions in social networks can have a profound effect on mate choice behavior. Male Atlantic molly Poecilia mexicana exhibit weaker mating preferences when an audience male is presented. This could be a male strategy to reduce sperm competition risk: interacting more equally with different females may be advantageous because rivals might copy mate choice decisions. In line with this hypothesis, a previous study found males to show a strong audience effect when being observed while exercising mate choice, but not when the rival was presented only before the choice tests. Audience effects on mate choice decisions have been quantified in poeciliid fishes using association preference designs, but it remains unknown if patterns found from measuring association times translate into actual mating behavior. Thus, we created five audience treatments simulating different forms of perceived sperm competition risk and determined focal males' mating preferences by scoring pre-mating (nipping) and mating behavior (gonopodial thrusting). Nipping did not reflect the pattern that was found when association preferences were measured, while a very similar pattern was uncovered in thrusting behavior. The strongest response was observed when the audience could eavesdrop on the focal male's behavior. A reduction in the strength of focal males' preferences was also seen after the rival male had an opportunity to mate with the focal male's preferred mate. In comparison, the reduction of mating preferences in response to an audience was greater when measuring association times than actual mating behavior. While measuring direct sexual interactions between the focal male and both stimulus females not only the male's motivational state is reflected but also females' behavior such as avoidance of male sexual harassment. KW - Communication networks KW - Male mate choice KW - Non-independent mate choice KW - Sexual selection KW - Sperm competition risk KW - Audience effect Y1 - 2012 SN - 1674-5507 VL - 58 IS - 1 SP - 84 EP - 94 PB - Current Zoology CY - Beijing ER - TY - JOUR A1 - Fürst, Johannes J. A1 - Levermann, Anders T1 - A minimal model for wind- and mixing-driven overturning threshold behavior for both driving mechanisms JF - Climate dynamics : observational, theoretical and computational research on the climate system N2 - We present a minimal conceptual model for the Atlantic meridional overturning circulation which incorporates the advection of salinity and the basic dynamics of the oceanic pycnocline. Four tracer transport processes following Gnanadesikan in Science 283(5410):2077-2079, (1999) allow for a dynamical adjustment of the oceanic pycnocline which defines the vertical extent of a mid-latitudinal box. At the same time the model captures the salt-advection feedback (Stommel in Tellus 13(2):224-230, (1961)). Due to its simplicity the model can be solved analytically in the purely wind- and purely mixing-driven cases. We find the possibility of abrupt transition in response to surface freshwater forcing in both cases even though the circulations are very different in physics and geometry. This analytical approach also provides expressions for the critical freshwater input marking the change in the dynamics of the system. Our analysis shows that including the pycnocline dynamics in a salt-advection model causes a decrease in the freshwater sensitivity of its northern sinking up to a threshold at which the circulation breaks down. Compared to previous studies the model is restricted to the essential ingredients. Still, it exhibits a rich behavior which reaches beyond the scope of this study and might be used as a paradigm for the qualitative behaviour of the Atlantic overturning in the discussion of driving mechanisms. KW - Meridional overturning circulation KW - Northern sinking KW - Critical freshwater threshold KW - Overturning sensitivity KW - Conceptual model KW - Stability KW - Atlantic meridional overturning circulation KW - Pycnocline depth KW - Driving mechanism Y1 - 2012 U6 - https://doi.org/10.1007/s00382-011-1003-7 SN - 0930-7575 VL - 38 IS - 1-2 SP - 239 EP - 260 PB - Springer CY - New York ER - TY - JOUR A1 - Rothweiler, Monika A1 - Chilla, Solveig A1 - Clahsen, Harald T1 - Subject-verb agreement in specific language impairment BT - a study of monolingual and bilingual German-speaking children JF - Bilingualism : language and cognition. N2 - This study investigates phenomena that have been claimed to be indicative of Specific Language Impairment (SLI) in German, focusing on subject-verb agreement marking. Longitudinal data from fourteen German-speaking children with SLI, seven monolingual and seven Turkish-German successive bilingual children, were examined. We found similar patterns of impairment in the two participant groups. Both the monolingual and the bilingual children with SLI had correct (present vs. preterit) tense marking and produced syntactically complex sentences such as embedded clauses and wh-questions, but were limited in reliably producing correct agreement-marked verb forms. These contrasts indicate that agreement marking is impaired in German-speaking children with SLI, without any necessary concurrent deficits in either the CP-domain or in tense marking. Our results also show that it is possible to identify SLI from an early successive bilingual child's performance in one of her two languages. KW - verb morphology KW - tense deficit KW - agreement deficit KW - Turkish-German SLI Y1 - 2012 U6 - https://doi.org/10.1017/S136672891100037X SN - 1366-7289 VL - 15 IS - 1 SP - 39 EP - 57 PB - Cambridge Univ. Press CY - New York ER - TY - JOUR A1 - Lippold, Holger A1 - Eidner, Sascha A1 - Kumke, Michael Uwe A1 - Lippmann-Pipke, Johanna T1 - Diffusion, degradation or on-site stabilisation - identifying causes of kinetic processes involved in metal-humate complexation JF - Applied geochemistry : journal of the International Association of Geochemistry and Cosmochemistry N2 - The applicability of equilibrium models for humic-bound transport of toxic or radioactive metals is affected by kinetic processes leading to an increasing inertness of metal-humic complexes. The chemical background is not yet understood. It is widely believed that bound metals undergo an in-diffusion process within the humic colloids, changing from weaker to stronger binding sites. This work is focussed on the competition effect of Al(III) on complexation of Tb(III) or Eu(III) as analogues of trivalent actinides. By using ion exchange and spectroscopic methods, their bound fractions were determined for solutions of Al and humic acid that had been pre-equilibrated for different periods of time. Whilst the amount of bound Al remained unchanged, its blocking effect was found to increase over a time frame of 2 days, which corresponds to the kinetics of the increase in complex inertness reported in most pertinent studies. Thus, the derived "diffusion theory'' turned out to be inapplicable, since it cannot explain an increase in competition for the "initial'' sites. A delayed degradation of polynuclear species (as found for Fe) does not occur. Consequently, the temporal changes must be based on structural rearrangements in the vicinity of bound Al, complicating the exchange or access. Time-dependent studies by laser fluorescence spectroscopy (steady-state and time-resolved) yielded evidence of substantial alterations, which were, however, immediately induced and did not show any significant trend on the time scale of interest, suggesting that the stabilisation process is based on comparatively moderate changes. Y1 - 2012 U6 - https://doi.org/10.1016/j.apgeochem.2011.11.001 SN - 0883-2927 VL - 27 IS - 1 SP - 250 EP - 256 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Reich, Sebastian T1 - A Gaussian-mixture ensemble transform filter JF - Quarterly journal of the Royal Meteorological Society N2 - We generalize the popular ensemble Kalman filter to an ensemble transform filter, in which the prior distribution can take the form of a Gaussian mixture or a Gaussian kernel density estimator. The design of the filter is based on a continuous formulation of the Bayesian filter analysis step. We call the new filter algorithm the ensemble Gaussian-mixture filter (EGMF). The EGMF is implemented for three simple test problems (Brownian dynamics in one dimension, Langevin dynamics in two dimensions and the three-dimensional Lorenz-63 model). It is demonstrated that the EGMF is capable of tracking systems with non-Gaussian uni- and multimodal ensemble distributions. KW - data assimilation KW - ensemble Kalman filter KW - nonlinear filtering KW - Gaussian mixtures KW - Gaussian kernel estimators Y1 - 2012 U6 - https://doi.org/10.1002/qj.898 SN - 0035-9009 VL - 138 IS - 662 SP - 222 EP - 233 PB - Wiley-Blackwell CY - Malden ER - TY - JOUR A1 - Winck, Flavia V. A1 - Riano-Pachon, Diego M. A1 - Sommer, Frederik A1 - Rupprecht, Jens A1 - Müller-Röber, Bernd T1 - The nuclear proteome of the green alga Chlamydomonas reinhardtii JF - Proteomics N2 - Nuclear proteins play a central role in regulating gene expression. Their identification is important for understanding how the nuclear repertoire changes over time under different conditions. Nuclear proteins are often underrepresented in proteomic studies due to the frequently low abundance of proteins involved in regulatory processes. So far, only few studies describing the nuclear proteome of plant species have been published. Recently, the genome sequence of the unicellular green alga Chlamydomonas reinhardtii has been obtained and annotated, allowing the development of further detailed studies for this organism. However, a detailed description of its nuclear proteome has not been reported so far. Here, we present an analysis of the nuclear proteome of the sequenced Chlamydomonas strain cc503. Using LC-MS/MS, we identified 672 proteins from nuclei isolates with a maximum 1% peptide spectrum false discovery rate. Besides well-known proteins (e.g. histones), transcription factors and other transcriptional regulators (e.g. tubby and HMG) were identified. The presence of protein motifs in nuclear proteins was investigated by computational tools, and specific over-represented protein motifs were identified. This study provides new insights into the complexity of the nuclear environment and reveals novel putative protein targets for further studies of nuclear mechanisms. KW - Nuclear proteomics KW - Plant proteomics KW - Systems biology KW - Transcription factor Y1 - 2012 U6 - https://doi.org/10.1002/pmic.201000782 SN - 1615-9853 VL - 12 IS - 1 SP - 95 EP - 100 PB - Wiley-Blackwell CY - Malden ER - TY - JOUR A1 - Wang, Wei-Hong A1 - Köhler, Barbara A1 - Cao, Feng-Qiu A1 - Liu, Guo-Wei A1 - Gong, Yuan-Yong A1 - Sheng, Song A1 - Song, Qi-Chao A1 - Cheng, Xiao-Yuan A1 - Garnett, Trevor A1 - Okamoto, Mamoru A1 - Qin, Rui A1 - Müller-Röber, Bernd A1 - Tester, Mark A1 - Liu, Lai-Hua T1 - Rice DUR3 mediates high-affinity urea transport and plays an effective role in improvement of urea acquisition and utilization when expressed in Arabidopsis JF - New phytologist : international journal of plant science N2 - Despite the great agricultural and ecological importance of efficient use of urea-containing nitrogen fertilizers by crops, molecular and physiological identities of urea transport in higher plants have been investigated only in Arabidopsis. We performed short-time urea-influx assays which have identified a low-affinity and high-affinity (Km of 7.55 mu M) transport system for urea-uptake by rice roots (Oryza sativa). A high-affinity urea transporter OsDUR3 from rice was functionally characterized here for the first time among crops. OsDUR3 encodes an integral membrane-protein with 721 amino acid residues and 15 predicted transmembrane domains. Heterologous expression demonstrated that OsDUR3 restored yeast dur3-mutant growth on urea and facilitated urea import with a Km of c. 10 mu M in Xenopus oocytes. Quantitative reverse-transcription polymerase chain reaction (qPCR) analysis revealed upregulation of OsDUR3 in rice roots under nitrogen-deficiency and urea-resupply after nitrogen-starvation. Importantly, overexpression of OsDUR3 complemented the Arabidopsis atdur3-1 mutant, improving growth on low urea and increasing root urea-uptake markedly. Together with its plasma membrane localization detected by green fluorescent protein (GFP)-tagging and with findings that disruption of OsDUR3 by T-DNA reduces rice growth on urea and urea uptake, we suggest that OsDUR3 is an active urea transporter that plays a significant role in effective urea acquisition and utilisation in rice. KW - high-affinity transporter KW - leaf senescence KW - nitrogen remobilization KW - OsDUR3 KW - overexpression KW - rice plant KW - urea transport and utilization Y1 - 2012 U6 - https://doi.org/10.1111/j.1469-8137.2011.03929.x SN - 0028-646X VL - 193 IS - 2 SP - 432 EP - 444 PB - Wiley-Blackwell CY - Malden ER - TY - JOUR A1 - Shainyan, Bagrat A. A1 - Suslova, Elena N. A1 - Kleinpeter, Erich T1 - Conformational analysis of 4,4-dimethyl-1-(trifluoromethylsulfonyl)-1,4-azasilinane and 2,2,6,6-tetramethyl-4-(trifluoromethylsulfonyl)-1,4,2,6-oxazadisilinane JF - Journal of physical organic chemistry N2 - 4,4-Dimethyl-1-(trifluoromethylsulfonyl)-1,4-azasilinane 1 and 2,2,6,6-tetramethyl-4-(trifluoromethylsulfonyl)-1,4,2,6-oxazadisilinane 2 were studied by variable temperature dynamic 1H, 13C, 19F NMR spectroscopy and theoretical calculations at the DFT (density functional theory) and MP2 (Moller-Plesset 2) levels of theory. Both kinetic (barriers to ring inversion) and thermodynamic data (frozen conformational equilibria) could be obtained for the two compounds. The computations revealed two minima on the potential energy surface for molecules 1 and 2 corresponding to the rotamers with the CF3SO2 group directed inward and outward the ring, the latter being 0.20.4 kcal/mol (for 1) and 1.1 kcal/mol (for 2) more stable than the former. The vibrational calculations at the DFT and MP2 levels of theory give the values of the free energy difference Delta G degrees for the 'inward' reversible arrow 'outward' equilibrium consistent with those determined from the experimentally measured ratio of the rotamers. The structure of crystalline compound 2 was ascertained by X-ray diffraction analysis. KW - conformational analysis KW - dynamic NMR KW - quantum chemical calculations KW - 2 KW - 6-disilamorpholines KW - 4-silapiperidines Y1 - 2012 U6 - https://doi.org/10.1002/poc.1882 SN - 0894-3230 VL - 25 IS - 1 SP - 83 EP - 90 PB - Wiley-Blackwell CY - Hoboken ER - TY - JOUR A1 - Akal, Cüneyt A1 - Candan, Osman A1 - Koralay, O. Ersin A1 - Oberhänsli, Roland A1 - Chen, Fukun A1 - Prelevic, Dejan T1 - Early Triassic potassic volcanism in the Afyon Zone of the Anatolides/Turkey - implications for the rifting of the Neo-Tethys JF - International journal of earth sciences N2 - Afyon Zone, which was derived from the Anatolide-Tauride platform during closure of the Neo-Tethys, is made up of pre-Mesozoic basement and unconformably overlying Triassic-Early Tertiary cover series. The Afyon Zone contains widespread metavolcanic rocks, which are dominated by rhyolite, dacite, and trachyandesite. They form a distinct volcanic succession, which is separated from the underlying Silurian-Lower Carboniferous metacarbonates and meta-siliciclastics by a regional unconformity. Trachyandesitic metavolcanics are made up of massive lava flows, pyroclastics and epiclastics, less frequently, domes and dikes, which were developed on a deeply eroded subaerial landmass. U/Pb and Pb/Pb zircon geochronology yielded Lower Triassic (similar to 250 Ma) ages, which are interpreted as extrusion age of trachyandesitic volcanics. Based on the stratigraphic, geochronological, and geochemical data, we suggest that these Lower Triassic magmatic rocks represent an extensional tectonic setting on the northern active margin of the Gondwana, which led to the development of the northern branch of the Neo-Tethys. KW - Meta-trachyandesite KW - Afyon Zone KW - Turkey KW - Neo-Tethys KW - Paleo-tethys Y1 - 2012 U6 - https://doi.org/10.1007/s00531-011-0654-2 SN - 1437-3254 VL - 101 IS - 1 SP - 177 EP - 194 PB - Springer CY - New York ER - TY - JOUR A1 - Cosentino, Domenico A1 - Schildgen, Taylor F. A1 - Cipollari, Paola A1 - Faranda, Costanza A1 - Gliozzi, Elsa A1 - Hudackova, Natalia A1 - Lucifora, Stella A1 - Strecker, Manfred T1 - Late Miocene surface uplift of the southern margin of the Central Anatolian Plateau, Central Taurides, Turkey JF - Geological Society of America bulletin N2 - The timing and pattern of surface uplift of Miocene marine sediments capping the southern margin of the Central Anatolian Plateau in southern Turkey provide a first-order constraint on possible mechanisms of regional uplift. Nannofossil, ostracod, and planktic foraminifera biostratigraphy of the Basyayla section (Mut-Ermenek Basin) within the Mut and Kfiselerli Formations suggests a Tortonian age for marine sediments unconformably capping basement rocks at 2 km elevation. The identification of biozone MMi 12a (7.81-8.35 Ma) from planktic foraminifera in the upper part of the section provides the tightest constraint on the age, which is further limited to 8.35-8.108 Ma as a result of the reverse polarity of the collected samples (chron 4r.1 r or 4r.2r). This provides a limiting age for the onset of surface uplift at the margin of one of the world's major orogenic plateaus, from which an average uplift rate of 0.24-0.25 mm/yr can be calculated. Subhorizontal beds of the uppermost marine sediments exposed throughout the Mut-Ermenek Basin suggest minimal localized deformation, with just minor faulting at the basin margin and broad antiformal deformation across the basin. This implies that the post-8 Ma uplift mechanism must be rooted deep within the crust or in the upper mantle. Published Pn-wave velocity data for the region are compatible with topography compensated by asthenosphere across the southern margin of the plateau, showing a close match to the highest topography when elevations are filtered with a 100-km-wide smoothing window. Uplift along the southern margin of the Central Anatolian Plateau is also reflected by the pattern of Miocene marine sediments capping the margin, which form an asymmetric drape fold over the topography. These observations, together with tomographic evidence for slab steepening and break-off beneath the Eastern Anatolian Plateau, suggest that at least some of the 2 km of post-8 Ma uplift of the southern Central Anatolian Plateau margin is compensated by low-density asthenospheric mantle that upwelled following slab break-off. Y1 - 2012 U6 - https://doi.org/10.1130/B30466.1 SN - 0016-7606 VL - 124 IS - 1-2 SP - 133 EP - 145 PB - American Institute of Physics CY - Boulder ER - TY - JOUR A1 - Bande, Alejandro A1 - Horton, Brian K. A1 - Ramirez, Juan C. A1 - Mora, Andres A1 - Parra, Mauricio A1 - Stockli, Daniel F. T1 - Clastic deposition, provenance, and sequence of Andean thrusting in the frontal Eastern Cordillera and Llanos foreland basin of Colombia JF - Geological Society of America bulletin N2 - Sedimentological, provenance, and detrital thermochronological results for basin fill at the modern deformation front of the northern Andes (6 degrees N latitude) provide a long-term, Eocene to Pliocene record of foreland-basin sedimentation along the Eastern Cordillera !Janos basin boundary in Colombia. Lithofacies assemblages and paleocurrent orientations in the upward-coarsening, 5-km-thick succession of the Nunchia syncline reveal a systematic shift from craton-derived, shallow-marine distal foreland (back-bulge) accumulation in the Mirador Formation, to orogen-sourced, deltaic, and coastalinfluenced sedimentation of the distal to medial foreland (foredeep) in the Carbonera and Leon Formations, to anastomosing fluvial and distributive braided fluvial megafan systems of the proximal foreland (foredeep to wedge-top) basin in the lower and upper Guayabo Formation. These changes in depositional processes and sediment dispersal are supported by up-section variations in detrital zircon U-Pb and (U-Th)/He ages that record exhumation of evolving, compartmentalized sediment source areas in the Eastern Cordillera. The data are interpreted in terms of a progressive eastward advance in foldand-thrust deformation, with late Eocene Oligocene deformation in the axial zone of the Eastern Cordillera along the western edge of Floresta basin (Soapaga thrust), early Miocene reactivation (inversion) of the eastern margin of the Mesozoic rift system (Pajarito and Guaicaramo thrusts), and middle late Miocene propagation of a footwall shortcut fault (Vopal thrust) that created the Nunchia syncline in a wedge-top (piggyback) setting of the eastern foothills along the transition from the Eastern Cordillera to Harms foreland basin. Collectively, the data presented here for the frontal Eastern Cordillera define a general in-sequence pattern of eastwardadvancing fold-and-thrust deformation during Cenozoic east-west shortening in the Colombian Andes. Y1 - 2012 U6 - https://doi.org/10.1130/B30412.1 SN - 0016-7606 VL - 124 IS - 1-2 SP - 59 EP - 76 PB - American Institute of Physics CY - Boulder ER - TY - JOUR A1 - Christ, Nicolas A1 - Immenhauser, Adrian A1 - Amour, Frederic A1 - Mutti, Maria A1 - Tomas, Sara A1 - Agar, Susan M. A1 - Alway, Robert A1 - Kabiri, Lahcen T1 - Characterization and interpretation of discontinuity surfaces in a Jurassic ramp setting (High Atlas, Morocco) JF - Sedimentology : the journal of the International Association of Sedimentologists N2 - Discontinuity surfaces are widely recognized but often poorly understood features of epeiric carbonate settings. In sedimentary systems, these features often represent hiatus surfaces below biostratigraphic resolution and may represent a considerable portion of the time contained in the sediment record. From an applied perspective, discontinuities may represent horizontal flow barriers and result in reservoir compartmentalization. Here, a total of 80 condensed surfaces (S1), firmgrounds (S2) and hardgrounds (S3) from a Jurassic (Middle and Upper Bajocian Assoul Formation) ramp setting of the High Atlas in Morocco are carefully documented with respect to their morphology, their secondary impregnation by Fe and Mn oxides and phosphates and their palaeoecological record. A statistical frequency distribution of two surfaces of the S1 type, 1.1 surfaces of the S2 type and 0.4 surfaces of the S3 type per 10 section metres is observed along a 220 m long carbonate succession. Based on two stratigraphically and spatially separated study windows and correlative sections, the stratigraphic frequency distribution, the lateral extent and the nature of facies change across discontinuities are documented in a quantitative manner. Specific features of the study site include the considerable stratigraphic thickness of the Assoul Formation and the conspicuous absence of subaerial-exposure-related features. Based on the data presented here, firmground and hardground surfaces are best interpreted as maximum-regression-related features. Relative sea-level lowstand results in a lowered wave base, and wave orbitals and currents result in sea floor omission and lithification. Care must be taken to avoid overly simplistic interpretations, as differences in bathymetry and carbonate facies result in marked changes in discontinuity characteristics in proximal-distal transects. The data shown here are of significance for those concerned with the interpretation of shoal water carbonate environments and are instrumental in the building of more realistic carbonate reservoir flow models. KW - Atlas Mountains KW - carbonate ramp KW - discontinuity surfaces KW - hardgrounds KW - hydrodynamic level KW - Jurassic KW - palaeoecology KW - relative sea-level Y1 - 2012 U6 - https://doi.org/10.1111/j.1365-3091.2011.01251.x SN - 0037-0746 VL - 59 IS - 1 SP - 249 EP - 290 PB - Wiley-Blackwell CY - Hoboken ER - TY - JOUR A1 - Trukenbrod, Hans Arne A1 - Engbert, Ralf T1 - Eye movements in a sequential scanning task - evidence for distributed processing JF - Journal of vision N2 - Current models of eye movement control are derived from theories assuming serial processing of single items or from theories based on parallel processing of multiple items at a time. This issue has persisted because most investigated paradigms generated data compatible with both serial and parallel models. Here, we study eye movements in a sequential scanning task, where stimulus n indicates the position of the next stimulus n + 1. We investigate whether eye movements are controlled by sequential attention shifts when the task requires serial order of processing. Our measures of distributed processing in the form of parafoveal-on-foveal effects, long-range modulations of target selection, and skipping saccades provide evidence against models strictly based on serial attention shifts. We conclude that our results lend support to parallel processing as a strategy for eye movement control. KW - eye movements KW - distributed processing KW - sequential attention shifts KW - parafoveal-on-foveal effects KW - skipping costs/benefits Y1 - 2012 U6 - https://doi.org/10.1167/12.1.5 SN - 1534-7362 VL - 12 IS - 1 PB - Association for Research in Vision and Opthalmology CY - Rockville ER -