TY  - GEN
A1  - Levermann, Anders
A1  - Petoukhov, Vladimir
A1  - Schewe, Jacob
A1  - Schellnhuber, Hans Joachim
T1  - Abrupt monsoon transitions as seen in paleorecords can be explained by moisture-advection feedback
T2  - Proceedings of the National Academy of Sciences of the United States of America
Y1  - 2016
U6  - https://doi.org/10.1073/pnas.1603130113
SN  - 0027-8424
VL  - 113
SP  - E2348
EP  - E2349
PB  - National Acad. of Sciences
CY  - Washington
ER  - 
TY  - GEN
A1  - Bürger, Andreas
A1  - Magdans, Uta
A1  - Gies, Hermann
T1  - Adsorption of amino acids on the magnetite-(111)-surface: a force field study (vol 19, 851, 2013)
T2  - Journal of molecular modeling
Y1  - 2016
U6  - https://doi.org/10.1007/s00894-016-3124-8
SN  - 1610-2940
SN  - 0948-5023
VL  - 22
PB  - Springer
CY  - New York
ER  - 
TY  - GEN
A1  - Teif, Vladimir B.
A1  - Cherstvy, Andrey G.
T1  - Chromatin and epigenetics: current biophysical views
T2  - AIMS biophysics
N2  - Recent advances in high-throughput sequencing experiments and their theoretical descriptions have determined fast dynamics of the "chromatin and epigenetics" field, with new concepts appearing at high rate. This field includes but is not limited to the study of DNA-protein-RNA interactions, chromatin packing properties at different scales, regulation of gene expression and protein trafficking in the cell nucleus, binding site search in the crowded chromatin environment and modulation of physical interactions by covalent chemical modifications of the binding partners. The current special issue does not pretend for the full coverage of the field, but it rather aims to capture its development and provide a snapshot of the most recent concepts and approaches. Eighteen open-access articles comprising this issue provide a delicate balance between current theoretical and experimental biophysical approaches to uncover chromatin structure and understand epigenetic regulation, allowing free flow of new ideas and preliminary results.
KW  - chromatin
KW  - epigenetics
KW  - linker histones
KW  - nucleosome
KW  - DNA-protein binding
KW  - histone modifications
KW  - remodelers
KW  - topologically associated domains
KW  - DNA methylation
KW  - DNA supercoiling
Y1  - 2016
U6  - https://doi.org/10.3934/biophy.2016.1.88
SN  - 2377-9098
VL  - 3
SP  - 88
EP  - 98
PB  - American Institute of Mathematical Sciences
CY  - Springfield
ER  - 
TY  - GEN
A1  - Berenstein, Igal
A1  - Beta, Carsten
A1  - De Decker, Yannick
T1  - Comment on "Flow-induced arrest of spatiotemporal chaos and transition to a stationary pattern in the Gray-Scott model"
T2  - Physical review : E, Statistical, nonlinear and soft matter physics
N2  - In this Comment, we review the results of pattern formation in a reaction-diffusion-advection system following the kinetics of the Gray-Scott model. A recent paper by Das [Phys. Rev. E 92, 052914 (2015)] shows that spatiotemporal chaos of the intermittency type can disappear as the advective flow is increased. This study, however, refers to a single point in the space of kinetic parameters of the original Gray-Scott model. Here we show that the wealth of patterns increases substantially as some of these parameters are changed. In addition to spatiotemporal intermittency, defect-mediated turbulence can also be found. In all cases, however, the chaotic behavior is seen to disappear as the advective flow is increased, following a scenario similar to what was reported in our earlier work [I. Berenstein and C. Beta, Phys. Rev. E 86, 056205 (2012)] as well as by Das. We also point out that a similar phenomenon can be found in other reaction-diffusion-advection models, such as the Oregonator model for the Belousov-Zhabotinsky reaction under flow conditions.
Y1  - 2016
U6  - https://doi.org/10.1103/PhysRevE.94.046201
SN  - 2470-0045
SN  - 2470-0053
VL  - 94
PB  - American Physical Society
CY  - College Park
ER  - 
TY  - GEN
A1  - Battiston, Stefano
A1  - Farmer, J. Doyne
A1  - Flache, Andreas
A1  - Garlaschelli, Diego
A1  - Haldane, Andrew G.
A1  - Heesterbeek, Hans
A1  - Hommes, Cars
A1  - Jaeger, Carlo
A1  - May, Robert
A1  - Scheffer, Marten
T1  - COMPLEX SYSTEMS Complexity theory and financial regulation
T2  - Science
N2  - Traditional economic theory could not explain, much less predict, the near collapse of the financial system and its long-lasting effects on the global economy. Since the 2008 crisis, there has been increasing interest in using ideas from complexity theory to make sense of economic and financial markets. Concepts, such as tipping points, networks, contagion, feedback, and resilience have entered the financial and regulatory lexicon, but actual use of complexity models and results remains at an early stage. Recent insights and techniques offer potential for better monitoring and management of highly interconnected economic and financial systems and, thus, may help anticipate and manage future crises.
Y1  - 2016
U6  - https://doi.org/10.1126/science.aad0299
SN  - 0036-8075
SN  - 1095-9203
VL  - 351
SP  - 818
EP  - 819
PB  - American Assoc. for the Advancement of Science
CY  - Washington
ER  - 
TY  - GEN
A1  - Battiston, Stefano
A1  - Farmer, Doyne
A1  - Flache, Andreas
A1  - Garlaschelli, Diego
A1  - Haldane, Andy
A1  - Heesterbeek, Hans
A1  - Hommes, Cars
A1  - Jaeger, Carlo
A1  - May, Robert
A1  - Scheffer, Marten
T1  - Financial complexity: Accounting for fraud Response
T2  - Science
Y1  - 2016
U6  - https://doi.org/10.1126/science.352.6283.302
SN  - 0036-8075
SN  - 1095-9203
VL  - 352
SP  - 302
EP  - 302
PB  - American Assoc. for the Advancement of Science
CY  - Washington
ER  - 
TY  - GEN
A1  - Wuesthoff, Martin
A1  - Sohl, F.
T1  - Obliquity tides have an impact in diurnal tidal stresses on the Moon.
T2  - Macromolecules : a publication of the American Chemical Society
Y1  - 2016
SN  - 1086-9379
SN  - 1945-5100
VL  - 51
SP  - A672
EP  - A672
PB  - Wiley-Blackwell
CY  - Hoboken
ER  - 
TY  - GEN
A1  - Oskinova, Lida
T1  - Preface: X-ray emission from hot stars and their winds
T2  - Advances in space research
Y1  - 2016
U6  - https://doi.org/10.1016/j.asr.2016.06.031
SN  - 0273-1177
SN  - 1879-1948
VL  - 58
SP  - 679
EP  - 679
PB  - Elsevier
CY  - Oxford
ER  - 
TY  - GEN
A1  - Metzler, Ralf
T1  - PROTEIN PHYSICS Forever ageing
T2  - Nature physics
N2  - Single-molecule techniques have long given us insight into the motion and interactions of individual molecules. But simulations now show that the dynamics inside single proteins is not as simple as we thought — and that proteins are forever changing.
Y1  - 2016
U6  - https://doi.org/10.1038/nphys3585
SN  - 1745-2473
SN  - 1745-2481
VL  - 12
SP  - 113
EP  - 114
PB  - Nature Publ. Group
CY  - London
ER  - 
TY  - GEN
A1  - Barniske, Andreas
A1  - Oskinova, Lida
A1  - Hamann, Wolf-Rainer
T1  - Two extremely luminous WN stars in the Galactic center with circumstellar emission from dust and gas (vol 486, pg 971, 2008)
T2  - Physical chemistry, chemical physics : a journal of European Chemical Societies
KW  - stars: Wolf-Rayet
KW  - HII regions
KW  - Galaxy: center
KW  - stars: individual: WR 102ka
KW  - stars: individual: WR 102c
KW  - errata, addenda
Y1  - 2016
U6  - https://doi.org/10.1051/0004-6361/200809568e
SN  - 1432-0746
VL  - 587
PB  - EDP Sciences
CY  - Les Ulis
ER  -