TY - JOUR A1 - Reschke, Stefan A1 - Mebs, Stefan A1 - Sigfridsson-Clauss, Kajsa G. V. A1 - Kositzki, Ramona A1 - Leimkühler, Silke A1 - Haumann, Michael T1 - Protonation and Sulfido versus Oxo Ligation Changes at the Molybdenum Cofactor in Xanthine Dehydrogenase (XDH) Variants Studied by X-ray Absorption Spectroscopy JF - Inorganic chemistry N2 - Enzymes of the xanthine oxidase family are among the best characterized mononuclear molybdenum enzymes. Open questions about their mechanism of transfer of an oxygen atom to the substrate remain. The enzymes share a molybdenum cofactor (Moco) with the metal ion binding a molybdopterin (MPT) molecule via its dithiolene function and terminal sulfur and oxygen groups. For xanthine dehydrogenase (XDH) from the bacterium Rhodobacter capsulatus, we used X-ray absorption spectroscopy to determine the Mo site structure, its changes in a pH range of 5-10, and the influence of amino acids (Glu730 and Gln179) close to Moco in wild-type (WT), Q179A, and E730A variants, complemented by enzyme kinetics and quantum chemical studies. Oxidized WT and Q179A revealed a similar Mo (VI) ion with each one MPT, Mo=O, Mo-O-, and Mo=S ligand, and a weak Mo-O(E730) bond at alkaline pH. Protonation of an oxo to a hydroxo (OH) ligand (pK similar to 6.8) causes inhibition of XDH at acidic pH, whereas deprotonated xanthine (pK similar to 8.8) is an inhibitor at alkaline pH. A similar acidic pK for the WT and Q179A. variants, as well as the metrical parameters of the Mo site and density functional theory calculations, suggested protonation at the equatorial oxo group. The sulfido was replaced with an oxo ligand in the inactive E730A variant, further showing another oxo and one Mo OH ligand at Mo, which are independent of pH. Our findings suggest a reaction mechanism for XDH in which an initial oxo rather than a hydroxo group and the sulfido ligand are essential for xanthine oxidation. Y1 - 2017 U6 - https://doi.org/10.1021/acs.inorgchem.6b02846 SN - 0020-1669 SN - 1520-510X VL - 56 IS - 4 SP - 2165 EP - 2176 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Marco, Makungu A1 - Deyou, Tsegaye A1 - Gruhonjic, Amra A1 - Holleran, John A1 - Duffy, Sandra A1 - Heydenreich, Matthias A1 - Firtzpatrick, Paul A. A1 - Landberg, Goran A1 - Koch, Andreas A1 - Derese, Solomon A1 - Pelletier, Jerry A1 - Avery, Vicky M. A1 - Erdelyi, Mate A1 - Yenesew, Abiy T1 - Pterocarpans and isoflavones from the root bark of Millettia micans and of Millettia dura JF - Phytochemistry letters KW - Millettia micans KW - Millettia dura KW - Pterocarpan KW - Isoflavone KW - Cytotoxicity KW - Plasmodium falciparum Y1 - 2017 U6 - https://doi.org/10.1016/j.phytol.2017.07.012 SN - 1874-3900 SN - 1876-7486 VL - 21 SP - 216 EP - 220 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Utecht, Manuel Martin A1 - Palmer, Richard E. A1 - Klamroth, Tillmann T1 - Quantum chemical approach to atomic manipulation of chlorobenzene on the Si(111)-7 x 7 surface BT - Resonance localization, vibrational activation, and surface dynamics JF - Physical review materials N2 - We present a cluster model to describe the localization of hot charge carriers on the Si(111)-7 x 7 surface, which leads to (nonlocal) desorption of chlorobenzene molecules in scanning tunneling microscope (STM) manipulation experiments. The localized charge carriers are modeled by a small cluster. By means of quantum chemical calculations, this cluster model explains many experimental findings from STM manipulation. We show that the negative charge is mainly localized in the surface, while the positive one also resides on the molecule. Both resonances boost desorption: In the negative resonance the adatom is elevated; in the positive one the chemisorption bond between the silicon surface adatom and chlorobenzene is broken. We find normal modes promoting desorption matching experimental low-temperature activation energies for electron-and hole-induced desorption. Y1 - 2017 U6 - https://doi.org/10.1103/PhysRevMaterials.1.026001 SN - 2475-9953 VL - 1 IS - 2 PB - American Physical Society CY - College Park ER - TY - THES A1 - Titov, Evgenii T1 - Quantum chemistry and surface hopping dynamics of azobenzenes T1 - Quantenchemie und Surface Hopping Dynamik von Azobenzolen BT - free and constrained models BT - freie und eingeschränkte Modelle N2 - This cumulative doctoral dissertation, based on three publications, is devoted to the investigation of several aspects of azobenzene molecular switches, with the aid of computational chemistry. In the first paper, the isomerization rates of a thermal cis → trans isomerization of azobenzenes for species formed upon an integer electron transfer, i.e., with added or removed electron, are calculated from Eyring’s transition state theory and activation energy barriers, computed by means of density functional theory. The obtained results are discussed in connection with an experimental study of the thermal cis → trans isomerization of azobenzene derivatives in the presence of gold nanoparticles, which is demonstrated to be greatly accelerated in comparison to the same isomerization reaction in the absence of nanoparticles. The second paper is concerned with electronically excited states of (i) dimers, composed of two photoswitchable units placed closely side-by-side, as well as (ii) monomers and dimers adsorbed on a silicon cluster. A variety of quantum chemistry methods, capable of calculating molecular electronic absorption spectra, based on density functional and wave function theories, is employed to quantify changes in optical absorption upon dimerization and covalent grafting to a surface. Specifically, the exciton (Davydov) splitting between states of interest is determined from first-principles calculations with the help of natural transition orbital analysis, allowing for insight into the nature of excited states. In the third paper, nonadiabatic molecular dynamics with trajectory surface hopping is applied to model the photoisomerization of azobenzene dimers, (i) for the isolated case (exhibiting the exciton coupling between two molecules) as well as (ii) for the constrained case (providing the van der Waals interaction with environment in addition to the exciton coupling between two monomers). For the latter, the additional azobenzene molecules, surrounding the dimer, are introduced, mimicking a densely packed self-assembled monolayer. From obtained results it is concluded that the isolated dimer is capable of isomerization likewise the monomer, whereas the steric hindrance considerably suppresses trans → cis photoisomerization. Furthermore, the present dissertation comprises the general introduction describing the main features of the azobenzene photoswitch and objectives of this work, theoretical basis of the employed methods, and discussion of gained findings in the light of existing literature. Also, additional results on (i) activation parameters of the thermal cis → trans isomerization of azobenzenes, (ii) an approximate scheme to account for anharmonicity of molecular vibrations in calculation of the activation entropy, as well as (iii) absorption spectra of photoswitch–silicon composites obtained from time-demanding wave function-based methods are presented. N2 - Die vorliegende kumulative Dissertationsschrift basiert auf drei wissenschaftlichen Publikationen und beschäftigt sich mit der computerchemischen Erforschung von molekularen Azobenzol-Schaltern. Die erste Publikation behandelt die thermische cis → trans Isomerisierung von Azobenzol durch einen Elektronentransfer (ein Elektron wird hinzugefügt oder entnommen). Dabei ist die Berechnung der Isomerisierungsrate des Elektronenübergangs nach der Eyringschen Theorie des Übergangszustands unter Einsatz von Aktivierungsenenergien durchgeführt worden. Die Letzteren sind mittels Dichtefunktionaltheorie berechnet worden. Die daraus erhaltenen Ergebnisse sind in Zusammenhang mit experimentellen Untersuchungen der thermische cis → trans Isomerisierung von Azobenzol-Derivaten in Lösung mit und ohne Goldnanopartikeln diskutiert worden. Die thermische Isomerisierung in Anwesenheit der Goldnanopartikeln läuft stark beschleunigt ab. Die zweite Publikation beschäftigt sich mit elektronisch angeregten Zuständen von (i) Dimeren bestehend aus zwei schaltbaren Einheiten, die dicht nebeneinander platziert sind, sowie (ii) Monomeren und Dimeren, die an einen Siliziumcluster adsorbiert sind. Mehrere quantenchemische Methoden basierend auf Dichtefunktionaltheorie und Wellenfunktionstheorie sind zur Berechnung der molekularen elektronischen Absorptionsspektren verwendet worden. Dadurch sind die Änderungen in der optischen Absorption sowohl bei der Dimerisierung, als auch beim kovalenten Anbinden an die Oberfläche bestimmt worden. Dazu ist die exzitonische Aufspaltung (Davydov splitting) zwischen den angeregten Zuständen aus ersten Prinzipien unter Verwendung von speziellen Orbitalen für Übergangszustände (natural transition orbitals) berechnet worden. Dadurch wird ein Einblick in die Natur der angeregten Zuständen erreicht. In der dritten Publikation ist eine nicht-adiabatische Molekulardynamik-Simulation unter Anwendung von trajectory surface hopping durchgeführt worden, um die Photoisomerisirung von Azobenzol-Dimeren zu modellieren. Dabei sind (i) ein isoliertes sowie (ii) ein Dimer in der Monolage betrachtet worden. Es sind die exzitonische Kopplung zwischen den zwei Molekülen, sowie, im Falle der Monolage, auch Van-der-Waals-Wechselwirkungen berücksicht worden. Die Ergebnisse weisen darauf hin, dass ein isoliertes Dimer gleichermaßen isomerisierungsfähig wie ein Monomer ist, wobei die cis → trans Photoisomerisierung durch die sterische Hinderung erheblich unterdrückt wird. Außerdem beinhaltet die darliegende Dissertationsschrift eine allgemeine Einführung, theoretische Grundlagen der verwendeten Methoden und die Diskussion der erhaltenen Ergebnisse mit Blick auf die vorhandene Literatur. Ferner sind zusätzliche Ergebnisse bezüglich der folgenden Aspekte dargestellt: (i) Aktivierungsparameter der thermischen cis → trans Isomerisierung von Azobenzol; (ii) ein Näherungsverfahren zur Berücksichtigung der Anharmonizität von Molekülschwingungen bei Berechnung der Aktivierungsentropie; (iii) Absorptionspektren von Photoschalter-Silizium-Kompositen berechnet mithilfe von zeitaufwändigen Wellenfunktions-basierten Methoden. KW - quantum chemistry KW - surface hopping dynamics KW - azobenzene KW - Quantenchemie KW - Surface Hopping Dynamik KW - Azobenzol Y1 - 2017 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-394610 ER - TY - GEN A1 - Mirskova, Anna N. A1 - Adamovich, Sergey N. A1 - Mirskov, Rudolf G. A1 - Schilde, Uwe T1 - Reaction of pharmacological active tris-(2-hydroxyethyl)ammonium 4-chlorophenylsulfanylacetate with ZnCl2 or NiCl2 BT - first conversion of a protic ionic liquid into metallated ionic liquid N2 - The reaction of pharmacological active protic ionic liquid tris-(2-hydroxyethyl)ammonium 4-chlorophenylsulfanylacetate H + N(CH 2 CH 2 OH) 3 ∙ ( - OOCCH 2 SC 6 H 4 Cl-4) (1) with zinc or nickel chloride in a ratio of 2:1 affords stable at room temperature powder-like adducts [H + N(CH 2 CH 2 OH) 3 ] 2 ∙ [M(OOCCH 2 SC 6 H 4 Cl-4) 2 Cl 2 ] 2- , M = Zn (2), Ni (3). By recrystallization from aqueous alcohol compound 2 unexpectedly gives Zn(OOCCH 2 SC 6 H 4 Cl-4) 2 ∙ 2H 2 O (4). Unlike 2, compound 3 gives crystals [N(CH 2 CH 2 OH) 3 ] 2 Ni 2+ · [ - OOCCH 2 SC 6 H 4 Cl-4] 2 (5), which have a structure of metallated ionic liquid. The structure of 5 has been proved by X-ray diffraction analysis. It is the first example of the conversion of a protic ionic liquid into potentially biological active metallated ionic liquid (1 → 3 → 5). T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 377 KW - Formate KW - Salts KW - Acids Y1 - 2017 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-401099 ER - TY - JOUR A1 - Schürmann, Robin Mathis A1 - Bald, Ilko T1 - Real-time monitoring of plasmon induced dissociative electron transfer to the potential DNA radiosensitizer 8-bromoadenine JF - Nanoscale N2 - The excitation of localized surface plasmons in noble metal nanoparticles (NPs) results in different nanoscale effects such as electric field enhancement, the generation of hot electrons and a temperature increase close to the NP surface. These effects are typically exploited in diverse fields such as surface-enhanced Raman scattering (SERS), NP catalysis and photothermal therapy (PTT). Halogenated nucleobases are applied as radiosensitizers in conventional radiation cancer therapy due to their high reactivity towards secondary electrons. Here, we use SERS to study the transformation of 8-bromoadenine ((8Br)A) into adenine on the surface of Au and AgNPs upon irradiation with a low-power continuous wave laser at 532, 633 and 785 nm, respectively. The dissociation of (8Br)A is ascribed to a hot-electron transfer reaction and the underlying kinetics are carefully explored. The reaction proceeds within seconds or even milliseconds. Similar dissociation reactions might also occur with other electrophilic molecules, which must be considered in the interpretation of respective SERS spectra. Furthermore, we suggest that hot-electron transfer induced dissociation of radiosensitizers such as (8Br)A can be applied in the future in PTT to enhance the damage of tumor tissue upon irradiation. Y1 - 2017 U6 - https://doi.org/10.1039/c6nr08695k SN - 2040-3364 SN - 2040-3372 VL - 9 SP - 1951 EP - 1955 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Zühlke, Martin A1 - Sass, Stephan A1 - Riebe, Daniel A1 - Beitz, Toralf A1 - Löhmannsröben, Hans-Gerd T1 - Real-Time Reaction Monitoring of an Organic Multistep Reaction by Electrospray Ionization-Ion Mobility Spectrometry JF - ChemPlusChem N2 - The capability of electrospray ionization (ESI)-ion mobility (IM) spectrometry for reaction monitoring is assessed both as a stand-alone real-time technique and in combination with HPLC. A three-step chemical reaction, consisting of a Williamson ether synthesis followed by a hydrogenation and an N-alkylation step, is chosen for demonstration. Intermediates and products are determined with a drift time to mass-per-charge correlation. Addition of an HPLC column to the setup increases the separation power and allows the determination of further species. Monitoring of the intensities of the various species over the reaction time allows the detection of the end of reaction, determination of the rate-limiting step, observation of the system response in discontinuous processes, and optimization of the mass ratios of the starting materials. However, charge competition in ESI influences the quantitative detection of substances in the reaction mixture. Therefore, two different methods are investigated, which allow the quantification and investigation of reaction kinetics. The first method is based on the pre-separation of the compounds on an HPLC column and their subsequent individual detection in the ESI-IM spectrometer. The second method involves an extended calibration procedure, which considers charge competition effects and facilitates nearly real-time quantification. KW - electrospray ionization KW - HPLC KW - ion mobility spectrometry KW - reaction mechanisms KW - reaction monitoring Y1 - 2017 U6 - https://doi.org/10.1002/cplu.201700296 SN - 2192-6506 VL - 82 SP - 1266 EP - 1273 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Schürmann, Robin Mathis A1 - Tsering, Thupten A1 - Tanzer, Katrin A1 - Denifl, Stephan A1 - Kumar, S. V. K. A1 - Bald, Ilko T1 - Resonant Formation of Strand Breaks in Sensitized Oligonucleotides Induced by Low-Energy Electrons (0.5-9 eV) JF - Angewandte Chemie : a journal of the Gesellschaft Deutscher Chemiker ; International edition N2 - Halogenated nucleobases are used as radiosensitizers in cancer radiation therapy, enhancing the reactivity of DNA to secondary low-energy electrons (LEEs). LEEs induce DNA strand breaks at specific energies (resonances) by dissociative electron attachment (DEA). Although halogenated nucleobases show intense DEA resonances at various electron energies in the gas phase, it is inherently difficult to investigate the influence of halogenated nucleobases on the actual DNA strand breakage over the broad range of electron energies at which DEA can take place (<12 eV). By using DNA origami nanostructures, we determined the energy dependence of the strand break cross-section for oligonucleotides modified with 8-bromoadenine ((8Br)A). These results were evaluated against DEA measurements with isolated (8Br)A in the gas phase. Contrary to expectations, the major contribution to strand breaks is from resonances at around 7 eV while resonances at very low energy (<2 eV) have little influence on strand breaks. KW - cancer radiation therapy KW - dissociative electron attachment KW - DNA origami KW - DNA radiation damage KW - radiosensitizers Y1 - 2017 U6 - https://doi.org/10.1002/anie.201705504 SN - 1433-7851 SN - 1521-3773 VL - 56 SP - 10952 EP - 10955 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Hommes-Schattmann, Paul J. A1 - Neffe, Axel T. A1 - Ahmad, Bilal A1 - Williams, Gareth R. A1 - Vanneaux, Valerie A1 - Menasche, Philippe A1 - Kalfa, David A1 - Lendlein, Andreas T1 - RGD constructs with physical anchor groups as polymer co-electrospinnable cell adhesives JF - Polymers for advanced technologies N2 - The tissue integration of synthetic polymers can be promoted by displaying RGD peptides at the biointerface with the objective of enhancing colonization of the material by endogenous cells. A firm but flexible attachment of the peptide to the polymer matrix, still allowing interaction with receptors, is therefore of interest. Here, the covalent coupling of flexible physical anchor groups, allowing for temporary immobilization on polymeric surfaces via hydrophobic or dipole-dipole interactions, to a RGD peptide was investigated. For this purpose, a stearate or an oligo(ethylene glycol) (OEG) was attached to GRGDS in 51-69% yield. The obtained RGD linker constructs were characterized by NMR, IR and MALDI-ToF mass spectrometry, revealing that the commercially available OEG and stearate linkers are in fact mixtures of similar compounds. The RGD linker constructs were co-electrospun with poly(p-dioxanone) (PPDO). After electrospinning, nitrogen could be detected on the surface of the PPDO fibers by X-ray photoelectron spectroscopy. The nitrogen content exceeded the calculated value for the homogeneous material mixture suggesting a pronounced presentation of the peptide on the fiber surface. Increasing amounts of RGD linker constructs in the electrospinning solution did not lead to a detection of an increased amount of peptide on the scaffold surface, suggesting inhomogeneous distribution of the peptide on the PPDO fiber surface. Human adipose-derived stem cells cultured on the patches showed similar viability as when cultured on PPDO containing pristine RGD. The fully characterized RGD linker constructs could serve as valuable tools for the further development of tissue-integrating polymeric scaffolds. Copyright (c) 2016 John Wiley & Sons, Ltd. KW - electrospinning KW - RGD peptides KW - cell adhesion KW - biofunctionalization Y1 - 2017 U6 - https://doi.org/10.1002/pat.3963 SN - 1042-7147 SN - 1099-1581 VL - 28 SP - 1312 EP - 1317 PB - Wiley CY - Hoboken ER - TY - THES A1 - Charan, Himanshu T1 - Self assembled transmembrane protein polymer conjugates for the generation of nano thin membranes and micro compartments T1 - Selbstassemblierte Transmembranprotein-Polymer Konjugate für die Herstellung von nanodünnen Membranen und Mikrokompartimenten N2 - This project was focused on generating ultra thin stimuli responsive membranes with an embedded transmembrane protein to act as the pore. The membranes were formed by crosslinking of transmembrane protein polymer conjugates. The conjugates were self assembled on air water interface and the polymer chains crosslinked using a UV crosslinkable comonomer to engender the membrane. The protein used for the studies reported herein was one of the largest transmembrane channel proteins, ferric hydroxamate uptake protein component A (FhuA), found in the outer membrane of Escherichia coli (E. coli). The wild type protein and three genetic variants of FhuA were provided by the group of Prof. Schwaneberg in Aachen. The well known thermo responsive poly(N isopropylacrylamide) (PNIPAAm) and the pH and thermo responsive polymer poly((2-dimethylamino)ethyl methacrylate) (PDMAEMA) were conjugated to FhuA and the genetic variants via controlled radical polymerization (CRP) using grafting from technique. These polymers were chosen because they would provide stimuli handles in the resulting membranes. The reported polymerization was the first ever attempt to attach polymer chains onto a membrane protein using site specific modification. The conjugate synthesis was carried out in two steps – a) FhuA was first converted into a macroinitiator by covalently linking a water soluble functional CRP initiator to the lysine residues. b) Copper mediated CRP was then carried out in pure buffer conditions with and without sacrificial initiator to generate the conjugates. The challenge was carrying out the modifications on FhuA without denaturing it. FhuA, being a transmembrane protein, requires amphiphilic species to stabilize its highly hydrophobic transmembrane region. For the experiments reported in this thesis, the stabilizing agent was 2 methyl 2,4-pentanediol (MPD). Since the buffer containing MPD cannot be considered a purely aqueous system, and also because MPD might interfere with the polymerization procedure, the reaction conditions were first optimized using a model globular protein, bovine serum albumin (BSA). The optimum conditions were then used for the generation of conjugates with FhuA. The generated conjugates were shown to be highly interfacially active and this property was exploited to let them self assemble onto polar apolar interfaces. The emulsions stabilized by particles or conjugates are referred to as Pickering emulsions. Crosslinking conjugates with a UV crosslinkable co monomer afforded nano thin micro compartments. Interfacial self assembly at the air water interface and subsequent UV crosslinking also yielded nano thin, stimuli responsive membranes which were shown to be mechanically robust. Initial characterization of the flux and permeation of water through these membranes is also reported herein. The generated nano thin membranes with PNIPAAm showed reduced permeation at elevated temperatures owing to the resistance by the hydrophobic and thus water-impermeable polymer matrix, hence confirming the stimulus responsivity. Additionally, as a part of collaborative work with Dr. Changzhu Wu, TU Dresden, conjugates of three enzymes with current/potential industrial relevance (candida antarctica lipase B, benzaldehyde lyase and glucose oxidase) with stimuli responsive polymers were synthesized. This work aims at carrying out cascade reactions in the Pickering emulsions generated by self assembled enzyme polymer conjugate. N2 - Im Rahmen dieses Projekts wurden ultradünne Stimuli responsive Membranen hergestellt, in die ein Transmembranprotein als Pore eingebettet ist. Die Membranen wurden durch das Verlinken von Transmembranprotein-Polymer Konjugaten an Grenzflächen hergestellt. Dazu wurden Konjugate an der Luft-Wasser-Grenzfläche selbstassembliert und die Polymerketten unter Verwendung eines UV-vernetzbaren Comonomers vernetzt. Als Protein wurde einer der größten Transmembran-Proteinkanäle, welcher sich in der Natur in der äußeren Membran von Escherichia coli (E. coli) findet, verwendet, nämlich ferric hydroxamate uptake protein component A (FhuA). Das Wildtyp-Protein und drei genetische Varianten von FhuA wurden von der Gruppe von Prof. Schwaneberg in Aachen zur Verfügung gestellt. Das bekannte thermo responsive Poly(N-isopropylacrylamid) (PNIPAAm) und das pH- und thermo responsive Polymer Poly((2-dimethylamino) ethylmethacrylat) (PDMAEMA) wurden über kontrollierte radikalische Polymerisationen (CRP) via der grafting-from Technik an FhuA und die genetischen Varianten konjugiert. Diese responsiven Polymere wurden ausgewählt, weil die Eigenschaften der resultierenden Membranen folglich durch äußere Einflusse verändert werden können. Dabei handelt es sich um das erste Beispiel, Polymerketten von einem Membranprotein ortsspezifisch zu synthetisieren. Die Konjugatsynthese wurde in zwei Schritten durchgeführt - a) zuerst wurde ein FhuA Makroinitiator durch Anbinden funktioneller CRP Initiatoren an die Lysinreste des Proteins dargestellt. B) durch Kupfer-vermittelte CRP wurden dann in Pufferlösung sowohl mit als auch ohne Opferinitiator die Konjugate synthetisiert. Die Herausforderung bestand darin, FhuA zu modifizieren ohne das Protein dabei zu denaturieren. Als Transmembranprotein benötigt FhuA amphiphile Agentien, um seine hydrophobe Transmembran Region zu stabilisieren. Für die im Rahmen dieser Arbeit durchgeführten Experimente war das stabilisierende Agens 2-Methyl-2,4-pentandiol (MPD). Da der MPD-Puffer nicht als rein wässriges Medium betrachtet werden kann, und auch, weil MPD das Polymerisationsverfahren beeinflussen könnte, wurden die Reaktionsbedingungen zunächst unter Verwendung eines globulären Modellproteins, nämlich Rinderserumalbumin (BSA), optimiert. Die optimalen Bedingungen wurden dann für die Erzeugung von Konjugaten mit FhuA verwendet. Die Konjugate zeigten eine hohe Grenzflächenaktivität und diese Eigenschaft wurde für die Selbstassemblierung an polaren/apolaren Grenzflächen ausgenutzt. Wurden Emulsionen durch die Konjugate stabilisiert, so bezeichnet man dies als Pickering-Emulsionen. Das Vernetzen von Konjugaten mit einem UV-vernetzbaren Co-Monomer führt zu nano-dünnen Mikrokompartimenten. Die Selbstassemblierung an der Luft-Wasser-Grenzfläche und anschließende UV-Vernetzung ergaben nano-dünne, Stimuli-responsive Membranen, die sich als mechanisch robust erwiesen. Eine erste Charakterisierung des Flusses und der Permeation von Wasser durch die Membranen wird ebenfalls in dieser Arbeit beschrieben. Die erzeugten nano dünnen Membranen mit PNIPAAm zeigten eine verminderte Permeation bei erhöhten Temperaturen aufgrund der nun hydrophoben und damit wasserundurchlässigen Polymermatrix. Darüber hinaus wurden für eine Kooperation mit Dr. Changzhu Wu, TU Dresden, Konjugate von drei Enzymen mit industrieller Relevanz (Candida antarctica Lipase B, Benzaldehydlyase und Glucose-Oxidase) synthetisiert. Diese Arbeit zielt auf Kaskadenreaktionen in Pickering-Emulsionen, die durch selbstassemblierte Enzym-Polymer Konjugate katalysiert werden. KW - FhuA KW - transmembrane protein KW - protein-polymer conjugate KW - controlled radical polymerization KW - ultra-thin membrane KW - FhuA KW - Transmembranprotein KW - Protein-Polymer Konjugaten KW - kontrollierte radikalische Polymerisationen KW - ultradünne Membranen Y1 - 2017 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-402060 SP - xii, 138 ER - TY - THES A1 - Willersinn, Jochen T1 - Self-Assembly of double hydrophilic block copolymers T1 - Selbstorganisation Doppelt Hydrophiler Blockcopolymere BT - organized particles and vesicles beyond amphiphiles BT - organisierte Partikel und Vesikel jenseits von Amphiphilen N2 - The motivation of this work was to investigate the self-assembly of a block copolymer species that attended little attraction before, double hydrophilic block copolymers (DHBCs). DHBCs consist of two linear hydrophilic polymer blocks. The self-assembly of DHBCs towards suprastructures such as particles and vesicles is determined via a strong difference in hydrophilicity between the corresponding blocks leading to a microphase separation due to immiscibility. The benefits of DHBCs and the corresponding particles and vesicles, such as biocompatibility, high permeability towards water and hydrophilic compounds as well as the large amount of possible functionalizations that can be addressed to the block copolymers make the application of DHBC based structures a viable choice in biomedicine. In order to assess a route towards self-assembled structures from DHBCs that display the potential to act as cargos for future applications, several block copolymers containing two hydrophilic polymer blocks were synthesized. Poly(ethylene oxide)-b-poly(N-vinylpyrrolidone) (PEO-b-PVP) and Poly(ethylene oxide)-b-poly(N-vinylpyrrolidone-co-N-vinylimidazole) (PEO-b-P(VP-co-VIm) block copolymers were synthesized via reversible deactivation radical polymerization (RDRP) techniques starting from a PEO-macro chain transfer agent. The block copolymers displayed a concentration dependent self-assembly behavior in water which was determined via dynamic light scattering (DLS). It was possible to observe spherical particles via laser scanning confocal microscopy (LSCM) and cryogenic scanning electron microscopy (cryo SEM) at highly concentrated solutions of PEO-b-PVP. Furthermore, a crosslinking strategy with (PEO-b-P(VP-co-VIm) was developed applying a diiodo derived crosslinker diethylene glycol bis(2-iodoethyl) ether to form quaternary amines at the VIm units. The formed crosslinked structures proved stability upon dilution and transfer into organic solvents. Moreover, self-assembly and crosslinking in DMF proved to be more advantageous and the crosslinked structures could be successfully transferred to aqueous solution. The afforded spherical submicron particles could be visualized via LSCM, cryo SEM and Cryo TEM. Double hydrophilic pullulan-b-poly(acrylamide) block copolymers were synthesized via copper catalyzed alkyne azide cycloaddition (CuAAC) starting from suitable pullulan alkyne and azide functionalized poly(N,N-dimethylacrylamide) (PDMA) and poly(N-ethylacrylamide) (PEA) homopolymers. The conjugation reaction was confirmed via SEC and 1H-NMR measurements. The self-assembly of the block copolymers was monitored with DLS and static light scattering (SLS) measurements indicating the presence of hollow spherical structures. Cryo SEM measurements could confirm the presence of vesicular structures for Pull-b-PEA block copolymers. Solutions of Pull-b-PDMA displayed particles in cryo SEM. Moreover, an end group functionalization of Pull-b-PDMA with Rhodamine B allowed assessing the structure via LSCM and hollow spherical structures were observed indicating the presence of vesicles, too. An exemplified pathway towards a DHBC based drug delivery vehicle was demonstrated with the block copolymer Pull-b-PVP. The block copolymer was synthesized via RAFT/MADIX techniques starting from a pullulan chain transfer agent. Pull-b-PVP displayed a concentration dependent self-assembly in water with an efficiency superior to the PEO-b-PVP system, which could be observed via DLS. Cryo SEM and LSCM microscopy displayed the presence of spherical structures. In order to apply a reversible crosslinking strategy on the synthesized block copolymer, the pullulan block was selectively oxidized to dialdehydes with NaIO4. The oxidation of the block copolymer was confirmed via SEC and 1H-NMR measurements. The self-assembled and oxidized structures were subsequently crosslinked with cystamine dihiydrochloride, a pH and redox responsive crosslinker resulting in crosslinked vesicles which were observed via cryo SEM. The vesicular structures of crosslinked Pull-b-PVP could be disassembled by acid treatment or the application of the redox agent tris(2-carboxyethyl)-phosphin-hydrochloride. The successful disassembly was monitored with DLS measurements. To conclude, self-assembled structures from DHBCs such as particles and vesicles display a strong potential to generate an impact on biomedicine and nanotechnologies. The variety of DHBC compositions and functionalities are very promising features for future applications. N2 - Die Selbstanordnung von amphiphilen Blockcopolymeren in Wasser zu Strukturen höherer Ordnung, wie Partikel oder Vesikel, ist seit vielen Jahren bekannt und findet Anwendung in vielen Aspekten der Medizin und Materialwissenschaft. Allerdings ist die treibende Kraft dieser Selbstanordnung zu Vesikeln, die Hydrophobie des wasserunlöslichen Polmyerblocks, auch ein Hindernis für den gezielten Transport von neuen Medikamenten und Wirkstoffen, da die Membran dieser Vesikel aufgrund des hydrophoben Anteils sehr dicht gepackt ist und eine Diffusion der Wirkstoffe durch diese Membran häufig nur durch hohen synthetischen Aufwand gewährleistet werden kann. Einen möglichen Ausweg bietet die Anwendung von doppelt hydrophilen Blockcopolymeren (DHBCs), respektive Blockcopolymere die aus zwei Polymerblöcken mit unterschiedlicher Hydrophilie bestehen. Ist dieser Unterschied groß genug, können DHBCs Partikel- und Vesikelstrukturen ausbilden, die denen der amphiphilen Blockcopolymere ähnlich sind. Um das Potential von DHBC Strukturen zu untersuchen und einen tieferen Einblick in die fundamentalen Prinzipien dieser Selbstanordnung zu erhalten, wurden in dieser Arbeit fünf verschiedene Blockcopolymere hergestellt. Poly(Ethylenoxid)-b-Poly(N-Vinylpyrrolidon) und Poly(Ethylenoxid)-b-Poly(N-Vinylpyrrolidon-co-N-Vinylimidazol) Blockcopolymere wurden über eine kontrollierte radikalische Polymerisation hergestellt und zeigten eine konzentrationsabhängige Selbstanordnung zu Partikeln mit Größen unter einem Mikrometer. Diese Partikel konnten vernetzt werden, sodass sie auch bei starker Verdünnung nicht zerfallen. Zwei Pullulan-b-Poly(Acrylamid) Blockcopolymere wurden über eine Konjugationsreaktion hergestellt, die die beiden separaten Polymerblöcke miteinander verbindet. Diese Blockcopolymere ordneten sich in Wasser zu Vesikulären Strukturen mit Größen zwischen 250 nm und 500 nm. Des Weiteren war es möglich, einen Farbstoff an ein Blockcopolymer anzubringen und den vesikulären Charakter mit konfokaler Mikroskopie zu untersuchen. Ein Ausblick auf mögliche medizinische Anwendung von DHBCs wurde mit dem letzten Blockcopolymer Pullulan-b-Poly(N-Vinylpyrrolidon) gegeben. Vesikel aus diesem Blockcopolymer wurden mit einem pH- und Redox-responsivem Vernetzer vernetzt und es wurde gezeigt, dass sich die vesikulären Strukturen durch Säurebehandlung zersetzen lassen. Dieses System veranschaulicht die theoretische Anwendungsmöglichkeit von DHBCs im gezielten Medikamententransport. KW - self-assembly KW - double hydrophilic block copolymers KW - polymer chemistry KW - RAFT/MADIX polymerization KW - block copolymer vesicles KW - Selbstorganisation KW - Doppelt hydrophile Blockcopolymere KW - Polymerchemie KW - RAFT/MADIX Polymerisation KW - Blockcopolymervesikel Y1 - 2017 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-408578 ER - TY - JOUR A1 - Roggenbuck, Dirk A1 - Goihl, Alexander A1 - Hanack, Katja A1 - Holzloehner, Pamela A1 - Hentschel, Christian A1 - Veiczi, Miklos A1 - Schierack, Peter A1 - Reinhold, Dirk A1 - Schulz, Hans-Ulrich T1 - Serological diagnosis and prognosis of severe acute pancreatitis by analysis of serum glycoprotein 2 JF - Clinical chemistry and laboratory medicine : journal of the Forum of the European Societies of Clinical Chemistry - the European Branch of the International Federation of Clinical Chemistry and Laboratory Medicine N2 - To better understand emerging adults’ perceptions of family interactions and value transmission to the next generation, we examined Hmong American emerging adults’ reflections on their parents’ parenting. Participants discussed what parenting practices they would do differently and others they hoped to emulate with their future adolescent children. Thirty Hmong American emerging adults (18-25 years; M = 21.2 years; 50% female) participated in interviews that focused retrospectively on the parent–adolescent relationship. Results revealed that emerging adults wanted to parent differently in three ways: less pressure about education, fewer restrictions, and more open communication. Emerging adults imagined being a similar parent in four ways: promoting education, promoting life values, giving guidance, and offering love and support. The findings highlight parenting practices that Hmong American emerging adults plan on transmitting (and not transmitting) to their own children, offering a glimpse into the type of parents the emerging adults may become. KW - acute pancreatitis KW - chronic pancreatitis KW - GP2 isoform alpha KW - pancreatic neoplasms KW - severe acute pancreatitis KW - zymogen granule membrane glycoprotein GP2 Y1 - 2017 U6 - https://doi.org/10.1515/cclm-2016-0797 SN - 1434-6621 SN - 1437-4331 VL - 55 SP - 854 EP - 864 PB - De Gruyter CY - Berlin ER - TY - GEN A1 - Nguyen, Vu Hoa A1 - Richert, S. A1 - Park, Hyunji A1 - Böker, Alexander A1 - Schnakenberg, Uwe T1 - Single interdigital transducer as surface acoustic wave impedance sensor T2 - Biosensors N2 - Surface acoustic wave (SAW) devices are well-known for gravimetric sensor applications. In biosensing applications, chemical-and biochemically evoked adsorption processes at surfaces are detected in liquid environments using delay-line or resonator sensor configurations, preferably in combination with appropriate microfluidic devices. In this paper, a novel SAW-based impedance sensor type is introduced which uses only one interdigital electrode transducer (IDT) simultaneously as SAW generator and sensor element. It is shown that the amplitude of the reflected S-11 signal directly depends on the input impedance of the SAW device. The input impedance is strongly influenced by mass adsorption which causes a characteristic and measurable impedance mismatch. KW - SAW impedance sensor KW - microfluidic KW - PHEMA Y1 - 2017 U6 - https://doi.org/10.1016/j.protcy.2017.04.032 SN - 2212-0173 VL - 27 SP - 70 EP - 71 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Plötz, Per-Arno A1 - Megow, Jörg A1 - Niehaus, Thomas A1 - Kühn, Oliver T1 - Spectral densities for Frenkel exciton dynamics in molecular crystals BT - a TD-DFTB approach JF - The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr N2 - Effects of thermal fluctuations on the electronic excitation energies and intermonomeric Coulomb couplings are investigated for a perylene-tetracarboxylic-diimidecrystal. To this end, time dependent density functional theory based tight binding (TD-DFTB) in the linear response formulation is used in combination with electronic ground state classical molecular dynamics. As a result, a parametrized Frenkel exciton Hamiltonian is obtained, with the effect of exciton-vibrational coupling being described by spectral densities. Employing dynamically defined normal modes, these spectral densities are analyzed in great detail, thus providing insight into the effect of specific intramolecular motions on excitation energies and Coulomb couplings. This distinguishes the present method from approaches using fixed transition densities. The efficiency by which intramolecular contributions to the spectral density can be calculated is a clear advantage of this method as compared with standard TD-DFT. Published by AIP Publishing. Y1 - 2017 U6 - https://doi.org/10.1063/1.4976625 SN - 0021-9606 SN - 1089-7690 VL - 146 PB - American Institute of Physics CY - Melville ER - TY - JOUR A1 - Khadem, S. M. J. A1 - Hille, Carsten A1 - Löhmannsröben, Hans-Gerd A1 - Sokolov, Igor M. T1 - Spot variation fluorescence correlation spectroscopy by data post-processing JF - Scientific reports N2 - Spot variation fluorescence correlation spectroscopy (SV-FCS) is a variant of the FCS techniques which may give useful information about the structural organisation of the medium in which the diffusion takes place. We show that the same results can be obtained by post-processing the photon count data from ordinary FCS measurements. By using this method, one obtains the fluorescence autocorrelation functions for sizes of confocal volume, which are effectively smaller than that of the initial FCS measurement. The photon counts of the initial experiment are first transformed into smooth intensity trace using kernel smoothing method or to a piecewise-continuous intensity trace using binning and then a non-linear transformation is applied to this trace. The result of this transformation mimics the photon count rate in an experiment performed with a smaller confocal volume. The applicability of the method is established in extensive numerical simulations and directly supported in in-vitro experiments. The procedure is then applied to the diffusion of AlexaFluor647-labeled streptavidin in living cells. Y1 - 2017 U6 - https://doi.org/10.1038/s41598-017-05672-8 SN - 2045-2322 VL - 7 SP - 1 EP - 9 PB - Nature Publ. Group CY - London ER - TY - JOUR A1 - Schuermann, Robin A1 - Tanzer, Katrin A1 - Dabkowska, Iwona A1 - Denifl, Stephan A1 - Bald, Ilko T1 - Stability of the Parent Anion of the Potential Radiosensitizer 8-Bromoadenine Formed by Low-Energy (< 3 eV) Electron Attachment JF - The journal of physical chemistry : B, Condensed matter, materials, surfaces, interfaces & biophysical chemistry N2 - 8-Bromoadenine ((8Br)A) is a potential DNA radiosensitizer for cancer radiation therapy due to its efficient interaction with low-energy electrons (LEEs). LEEs are a short-living species generated during the radiation damage of DNA by high-energy radiation as it is applied in cancer radiation therapy. Electron attachment to (8Br)A in the gas phase results in a stable parent anion below 3 eV electron energy in addition to fragmentation products formed by resonant exocyclic bond cleavages. Density functional theory (DFT) calculations of the (8Br)A(-) anion reveal an exotic bond between the bromine and the C8 atom with a bond length of 2.6 angstrom, where the majority of the charge is located on bromine and the spin is mainly located on the C8 atom. The detailed understanding of such long-lived anionic states of nucleobase analogues supports the rational development of new therapeutic agents, in which the enhancement of dissociative electron transfer to the DNA backbone is critical to induce DNA strand breaks in cancerous tissue. Y1 - 2017 U6 - https://doi.org/10.1021/acs.jpcb.7b02130 SN - 1520-6106 VL - 121 SP - 5730 EP - 5734 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Dani, Alessandro A1 - Tauber, Karoline A1 - Zhang, Weiyi A1 - Schlaad, Helmut A1 - Yuan, Jiayin T1 - Stable Covalently Photo-Crosslinked Poly(Ionic Liquid) Membrane with Gradient Pore Size JF - Macromolecular rapid communications N2 - Porous polyelectrolyte membranes stable in a highly ionic environment are obtained by covalent crosslinking of an imidazolium-based poly(ionic liquid). The crosslinking reaction involves the UV light-induced thiol-ene (click) chemistry, and the phase separation, occurring during the crosslinking step, generates a fully interconnected porous structure in the membrane. The porosity is on the order of the micrometer scale and the membrane shows a gradient of pore size across the membrane cross-section. The membrane can separate polystyrene latex particles of different size and undergoes actuation in contact with acetone due to the asymmetric porous structure. KW - membrane KW - photo-crosslinked KW - poly(ionic liquid) KW - porous structure Y1 - 2017 U6 - https://doi.org/10.1002/marc.201700167 SN - 1022-1336 SN - 1521-3927 VL - 38 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Schmidt, Bernd A1 - Audörsch, Stephan T1 - Stereoselective Total Syntheses of Polyacetylene Plant Metabolites via Ester-Tethered Ring Closing Metathesis JF - The journal of organic chemistry N2 - Total syntheses of five naturally occurring polyacetylenes from three different plants are described. These natural products have in common an E,Z-configured conjugated diene linked to a di-or triyne chain. As the key method to stereoselectively establish the E,Z-diene part, an ester-tethered ring-closing metathesis/base-induced eliminative ring opening sequence was used. The results presented herein do not only showcase the utility of this tethered RCM variant but have also prompted us to suggest that the originally assigned absolute configurations of chiral polyacetylenes from Atractylodes macrocephala should be revised or at least reconsidered. Y1 - 2017 U6 - https://doi.org/10.1021/acs.joc.6b02987 SN - 0022-3263 VL - 82 IS - 3 SP - 1743 EP - 1760 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Loncaric, Ivor A1 - Fuchsel, Gernot A1 - Juaristi, J. I. A1 - Saalfrank, Peter T1 - Strong Anisotropic Interaction Controls Unusual Sticking and Scattering of CO at Ru(0001) JF - Physical review letters N2 - Complete sticking at low incidence energies and broad angular scattering distributions at higher energies are often observed in molecular beam experiments on gas-surface systems which feature a deep chemisorption well and lack early reaction barriers. Although CO binds strongly on Ru(0001), scattering is characterized by rather narrow angular distributions and sticking is incomplete even at low incidence energies. We perform molecular dynamics simulations, accounting for phononic (and electronic) energy loss channels, on a potential energy surface based on first-principles electronic structure calculations that reproduce the molecular beam experiments. We demonstrate that the mentioned unusual behavior is a consequence of a very strong rotational anisotropy in the molecule-surface interaction potential. Beyond the interpretation of scattering phenomena, we also discuss implications of our results for the recently proposed role of a precursor state for the desorption and scattering of CO from ruthenium. Y1 - 2017 U6 - https://doi.org/10.1103/PhysRevLett.119.146101 SN - 0031-9007 SN - 1079-7114 VL - 119 PB - American Physical Society CY - College Park ER - TY - JOUR A1 - Knecht, Volker A1 - Reiter, Guenter A1 - Schlaad, Helmut A1 - Reiter, Renate T1 - Structure Formation in Langmuir Peptide Films As Revealed from Coarse-Grained Molecular Dynamics Simulations JF - Langmuir N2 - Molecular dynamics simulations in conjunction with the Martini coarse-grained model have been used to investigate the (nonequilibrium) behavior of helical 22-residue poly(gamma-benzyl-L-glutamate) (PBLG) peptides at the water/vapor interface. Preformed PBLG mono- or bilayers homogeneously covering the water surface laterally collapse in tens of nanoseconds, exposing significant proportions of empty water surface. This behavior was also observed in recent AFM experiments at similar areas per monomer, where a complete coverage had been assumed in earlier work. In the simulations, depending on the area per monomer, either elongated clusters or fibrils form, whose heights (together with the portion of empty water surface) increase over time. Peptides tend to align with respect to the fiber axis or with the major principal axis of the cluster, respectively. The aspect ratio of the cluster observed is 1.7 and, hence, comparable to though somewhat smaller than the aspect ratio of the peptides in alpha-helical conformation, which is 2.2. The heights of the fibrils is 3 nm after 20 ns and increases to 4.5 nm if the relaxation time is increased by 2 orders of magnitude, in agreement with the experiment. Aggregates with heights of about 3 or 4.5 nm are found to correspond to local bi- or trilayer structures, respectively. Y1 - 2017 U6 - https://doi.org/10.1021/acs.langmuir.7b01455 SN - 0743-7463 VL - 33 SP - 6492 EP - 6502 PB - American Chemical Society CY - Washington ER -