TY - JOUR A1 - Üstün, Suayib A1 - Bartetzko, Verena A1 - Börnke, Frederik T1 - The Xanthomonas effector XopJ triggers a conditional hypersensitive response upon treatment of N. benthamiana leaves with salicylic acid JF - Frontiers in plant science N2 - XopJ is a Xanthomonas type III effector protein that promotes bacterial virulence on susceptible pepper plants through the inhibition of the host cell proteasome and a resultant suppression of salicylic acid (SA) - dependent defense responses. We show here that Nicotiana benthamiana leaves transiently expressing XopJ display hypersensitive response (HR) -like symptoms when exogenously treated with SA. This apparent avirulence function of XopJ was further dependent on effector myristoylation as well as on an intact catalytic triad, suggesting a requirement of its enzymatic activity for HR-like symptom elicitation. The ability of XopJ to cause a HR-like symptom development upon SA treatment was lost upon silencing of SGT1 and NDR1, respectively, but was independent of EDS1 silencing, suggesting that XopJ is recognized by an R protein of the CC-NBS-LRR class. Furthermore, silencing of NPR1 abolished the elicitation of HR-like symptoms in XopJ expressing leaves after SA application. Measurement of the proteasome activity indicated that proteasome inhibition by XopJ was alleviated in the presence of SA, an effect that was not observed in NPR1 silenced plants. Our results suggest that XopJ - triggered HR-like symptoms are closely related to the virulence function of the effector and that XopJ follows a two-signal model in order to elicit a response in the non-host plant N. benthamiana. KW - Xanthomonas KW - type-III effector KW - XopJ KW - avirulence KW - salicylic acid Y1 - 2015 U6 - https://doi.org/10.3389/fpls.2015.00599 SN - 1664-462X VL - 6 PB - Frontiers Research Foundation CY - Lausanne ER - TY - GEN A1 - Üstün, Suayib A1 - Bartetzko, Verena A1 - Börnke, Frederik T1 - The Xanthomonas effector XopJ triggers a conditional hypersensitive response upon treatment of N. benthamiana leaves with salicylic acid T2 - Frontiers in plant science N2 - XopJ is a Xanthomonas type III effector protein that promotes bacterial virulence on susceptible pepper plants through the inhibition of the host cell proteasome and a resultant suppression of salicylic acid (SA) - dependent defense responses. We show here that Nicotiana benthamiana leaves transiently expressing XopJ display hypersensitive response (HR) -like symptoms when exogenously treated with SA. This apparent avirulence function of XopJ was further dependent on effector myristoylation as well as on an intact catalytic triad, suggesting a requirement of its enzymatic activity for HR-like symptom elicitation. The ability of XopJ to cause a HR-like symptom development upon SA treatment was lost upon silencing of SGT1 and NDR1, respectively, but was independent of EDS1 silencing, suggesting that XopJ is recognized by an R protein of the CC-NBS-LRR class. Furthermore, silencing of NPR1 abolished the elicitation of HR-like symptoms in XopJ expressing leaves after SA application. Measurement of the proteasome activity indicated that proteasome inhibition by XopJ was alleviated in the presence of SA, an effect that was not observed in NPR1 silenced plants. Our results suggest that XopJ - triggered HR-like symptoms are closely related to the virulence function of the effector and that XopJ follows a two-signal model in order to elicit a response in the non-host plant N. benthamiana. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 432 KW - Xanthomonas KW - type-III effector KW - XopJ KW - avirulence KW - salicylic acid Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-406537 ER - TY - JOUR A1 - Zühlke, Martin A1 - Riebe, Daniel A1 - Beitz, Toralf A1 - Löhmannsröben, Hans-Gerd A1 - Zenichowski, Karl A1 - Diener, Marc A1 - Linscheid, Michael W. T1 - An electrospray ionization-ion mobility spectrometer as detector for high-performance liquid chromatography JF - European journal of mass spectrometry N2 - The application of electrospray ionization (ESI) ion mobility (IM) spectrometry on the detection end of a high-performance liquid chromatograph has been a subject of study for some time. So far, this method has been limited to low flow rates or has required splitting of the liquid flow. This work presents a novel concept of an ESI source facilitating the stable operation of the spectrometer at flow rates between 10 mu L min(-1) and 1500 mu L min(-1) without flow splitting, advancing the T-cylinder design developed by Kurnin and co-workers. Flow rates eight times faster than previously reported were achieved because of a more efficient dispersion of the liquid at increased electrospray voltages combined with nebulization by a sheath gas. Imaging revealed the spray operation to be in a rotationally symmetric multijet-mode. The novel ESI-IM spectrometer tolerates high water contents (<= 90%) and electrolyte concentrations up to 10 mM, meeting another condition required of high-performance liquid chromatography (HPLC) detectors. Limits of detection of 50 nM for promazine in the positive mode and 1 mu M for 1,3-dinitrobenzene in the negative mode were established. Three mixtures of reduced complexity (five surfactants, four neuroleptics, and two isomers) were separated in the millisecond regime in stand-alone operation of the spectrometer. Separations of two more complex mixtures (five neuroleptics and 13 pesticides) demonstrate the application of the spectrometer as an HPLC detector. The examples illustrate the advantages of the spectrometer over the established diode array detector, in terms of additional IM separation of substances not fully separated in the retention time domain as well as identification of substances based on their characteristic IMs. KW - ESI KW - IMS KW - HPLC KW - spray imaging KW - neuroleptics KW - pesticides KW - surfactants Y1 - 2015 U6 - https://doi.org/10.1255/ejms.1367 SN - 1469-0667 SN - 1751-6838 VL - 21 IS - 3 SP - 391 EP - 402 PB - WeltTrends CY - Sussex ER - TY - JOUR A1 - Zurell, Damaris A1 - Eggers, Ute A1 - Kaatz, Michael A1 - Rotics, Shay A1 - Sapir, Nir A1 - Wikelski, Martin A1 - Nathan, Ran A1 - Jeltsch, Florian T1 - Individual-based modelling of resource competition to predict density-dependent population dynamics: a case study with white storks JF - Oikos N2 - Density regulation influences population dynamics through its effects on demographic rates and consequently constitutes a key mechanism explaining the response of organisms to environmental changes. Yet, it is difficult to establish the exact form of density dependence from empirical data. Here, we developed an individual-based model to explore how resource limitation and behavioural processes determine the spatial structure of white stork Ciconia ciconia populations and regulate reproductive rates. We found that the form of density dependence differed considerably between landscapes with the same overall resource availability and between home range selection strategies, highlighting the importance of fine-scale resource distribution in interaction with behaviour. In accordance with theories of density dependence, breeding output generally decreased with density but this effect was highly variable and strongly affected by optimal foraging strategy, resource detection probability and colonial behaviour. Moreover, our results uncovered an overlooked consequence of density dependence by showing that high early nestling mortality in storks, assumed to be the outcome of harsh weather, may actually result from density dependent effects on food provision. Our findings emphasize that accounting for interactive effects of individual behaviour and local environmental factors is crucial for understanding density-dependent processes within spatially structured populations. Enhanced understanding of the ways animal populations are regulated in general, and how habitat conditions and behaviour may dictate spatial population structure and demographic rates is critically needed for predicting the dynamics of populations, communities and ecosystems under changing environmental conditions. Y1 - 2015 U6 - https://doi.org/10.1111/oik.01294 SN - 0030-1299 SN - 1600-0706 VL - 124 IS - 3 SP - 319 EP - 330 PB - Wiley-Blackwell CY - Hoboken ER - TY - THES A1 - Zupok, Arkadiusz T1 - The psbB-operon is a major locus for plastome-genome incompatibility in Oenothera Y1 - 2015 ER - TY - JOUR A1 - Zou, Hua A1 - Schlaad, Helmut T1 - Thermoresponsive PNIPAM/Silica Nanoparticles by Direct Photopolymerization in Aqueous Media JF - Journal of polymer science : A, Polymer chemistry N2 - This article presents a simple and facile method to fabricate thermoresponsive polymer-grafted silica particles by direct surface-initiated photopolymerization of N-isopropylacrylamide (NIPAM). This method is based on silica particles bearing thiol functionalities, which are transformed into thiyl radicals by irradiation with UV light to initiate the polymerization of NIPAM in aqueous media at room temperature. The photopolymerization of NIPAM could be applied to smaller thiol-functionalized particles (approximate to 48 nm) as well as to larger particles (approximate to 692 nm). Hollow poly(NIPAM) capsules could be formed after etching away the silica cores from the composite particles. It is possible to produce tailor-made composite particles or capsules for particular applications by extending this approach to other vinyl monomers. (c) 2015 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 2015, 53, 1260-1267 KW - nanocomposites KW - nanoparticles KW - photopolymerization KW - silica nanoparticles KW - surface-initiated photopolymerization KW - thermoresponsive KW - thiol Y1 - 2015 U6 - https://doi.org/10.1002/pola.27593 SN - 0887-624X SN - 1099-0518 VL - 53 IS - 10 SP - 1260 EP - 1267 PB - Wiley-Blackwell CY - Hoboken ER - TY - JOUR A1 - Zirafi, Onofrio A1 - Kim, Kyeong-Ae A1 - Ständker, Ludger A1 - Mohr, Katharina B. A1 - Sauter, Daniel A1 - Heigele, Anke A1 - Kluge, Silvia F. A1 - Wiercinska, Eliza A1 - Chudziak, Doreen A1 - Richter, Rudolf A1 - Möpps, Barbara A1 - Gierschik, Peter A1 - Vas, Virag A1 - Geiger, Hartmut A1 - Lamla, Markus A1 - Weil, Tanja A1 - Burster, Timo A1 - Zgraja, Andreas A1 - Daubeuf, Francois A1 - Frossard, Nelly A1 - Hachet-Haas, Muriel A1 - Heunisch, Fabian A1 - Reichetzeder, Christoph A1 - Galzi, Jean-Luc A1 - Perez-Castells, Javier A1 - Canales-Mayordomo, Angeles A1 - Jimenez-Barbero, Jesus A1 - Gimenez-Gallego, Guillermo A1 - Schneider, Marion A1 - Shorter, James A1 - Telenti, Amalio A1 - Hocher, Berthold A1 - Forssmann, Wolf-Georg A1 - Bonig, Halvard A1 - Kirchhoff, Frank A1 - Münch, Jan T1 - Discovery and Characterization of an Endogenous CXCR4 Antagonist JF - Cell reports N2 - CXCL12-CXCR4 signaling controls multiple physiological processes and its dysregulation is associated with cancers and inflammatory diseases. To discover as-yet-unknown endogenous ligands of CXCR4, we screened a blood-derived peptide library for inhibitors of CXCR4-tropic HIV-1 strains. This approach identified a 16 amino acid fragment of serum albumin as an effective and highly specific CXCR4 antagonist. The endogenous peptide, termed EPI-X4, is evolutionarily conserved and generated from the highly abundant albumin precursor by pH-regulated proteases. EPI-X4 forms an unusual lasso-like structure and antagonizes CXCL12-induced tumor cell migration, mobilizes stem cells, and suppresses inflammatory responses in mice. Furthermore, the peptide is abundant in the urine of patients with inflammatory kidney diseases and may serve as a biomarker. Our results identify EPI-X4 as a key regulator of CXCR4 signaling and introduce proteolysis of an abundant precursor protein as an alternative concept for chemokine receptor regulation. Y1 - 2015 U6 - https://doi.org/10.1016/j.celrep.2015.03.061 SN - 2211-1247 VL - 11 IS - 5 SP - 737 EP - 747 PB - Cell Press CY - Cambridge ER - TY - JOUR A1 - Zimmermann, Matthias A1 - Eckardt, Barbara A1 - Horn-Conrad, Antje A1 - Jäger, Heidi A1 - Kampe, Heike A1 - Scholz, Jana A1 - Görlich, Petra A1 - Sütterlin, Sabine A1 - Jäger, Sophie A1 - Scherbaum, Frank T1 - Portal Wissen = Wege BT - Das Forschungsmagazin der Universität Potsdam N2 - Wie Merkmale von Generation zu Generation weitervererbt werden, wie sich die Erbinformation dabei durch Mutationen verändert und somit zur Ausprägung neuer Eigenschaften und der Entstehung neuer Arten beiträgt, sind spannende Fragen der Biologie. Genetische Differenzierung führte im Laufe von Jahrmillionen zur Ausbildung einer schier unglaublichen Artenvielfalt. Die Evolution hat viele Wege beschritten. Sie hat zu großartiger natürlicher Biodiversität geführt – zu Organismen, die an sehr unterschiedliche Umwelten angepasst sind und zum Teil eine ulkige Gestalt haben oder ein merkwürdiges Verhalten zeigen. Aber auch die von Menschenhand gemachte Biodiversität ist überwältigend – man denke nur an die 10.000 verschiedenen Rosensorten, die uns entzücken, oder die Myriaden unterschiedlicher Weizen-, Gerste- oder Maisvarianten; Pflanzen, die allesamt früher einmal einfache Gräser waren, uns heute aber ernähren. Wir Menschen schaffen eine eigene Biodiversität, eine, die die Natur selbst nicht kennt. Und wir „fahren“ gut damit. Dank der Genomforschung können wir heute die gesamte Erbinformation von Organismen in wenigen Stunden bis Tagen aus- lesen. Sehr viel länger dauert es aber, die zahlreichen Abschnitte eines Genoms funktionell zu kartieren. Die Wissenschaftler bedienen sich dazu vielfältiger Methoden: Dabei gehört es heute weltweit zum Standardrepertoire, Gene gezielt zu inaktivieren oder zu aktivieren, ihren Code zu modifizieren oder Erbinformationen zwischen Organismen auszutauschen. Dennoch sind die Wege, die zur Erkenntnis führen, oft verschlungen. Nicht selten müssen ausgeklügelte experimentelle Ansätze gewählt werden, um neue Einsichten in biologische Prozesse zu gewinnen. Mit den Methoden der Genomforschung können wir nicht nur das erkunden, was sich in der Natur „da draußen“ findet. Wir können auch fragen: „Wie verhält sich ein Lebewesen, beispielsweise ein Moos, eigentlich, wenn wir es zur International Space Station (ISS) schicken? Und können wir daraus Kenntnisse gewinnen über die Anpassungsstrategien von Lebewesen an harsche Umweltbedingungen oder gar für eine spätere Besiedlung des Mondes oder des Mars´?“ Oder können wir mithilfe der synthetischen Biologie Mikroorganismen präzise, quasi am Reißbrett geplant, so verändern, dass neue Optionen für die Behandlung von Krankheiten und für die Herstellung innovativer biobasierter Produkte entstehen? Die Antwort auf beide Fragen lautet eindeutig: Ja! (Wenngleich ein Umzug auf andere Planeten derzeit natürlich nicht vornan steht.). Landnutzung durch den Menschen bestimmt die Biodiversität. Andererseits tragen Organismen zur landschaftlichen Formenbildung bei und beeinflussen über kurz oder lang die Zusammensetzung unserer Atmosphäre. Auch hier gibt es spannende Fragen, mit denen sich die Forschung beschäftigt. Um neue Erkenntnisse zu gewinnen, müssen Forscher immer wieder neue Wege einschlagen. Oft kreuzen sich auch Pfade. So war es beispielsweise vor wenigen Jahren noch kaum absehbar, wir stark die ökologische Forschung beispielsweise von den schnellen DNA-Sequenziermethoden profitieren würde, und die Genomforscher unter uns konnten kaum erahnen, wie die gleichen Techniken uns neue Möglichkeiten an die Hand geben sollten, die hochkomplexe Regulation in Zellen zu untersuchen und für die Optimierung biotechnologischer Prozesse zu nutzen. Beispiele aus den vielfältigen Facetten der biologischen Forschung finden Sie – neben anderen interessanten Beiträgen – in der aktuellen Ausgabe von „Portal Wissen“. Ich wünsche Ihnen eine anregende Lektüre! Prof. Dr. Bernd Müller-Röber Professor für Molekularbiologie T3 - Portal Wissen: Das Forschungsmagazin der Universität Potsdam [Deutsche Ausgabe] - 01/2015 Y1 - 2015 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-440851 SN - 2194-4237 IS - 01/2015 ER - TY - JOUR A1 - Zimmermann, Andreas A1 - Ney, Martin T1 - Cyber-Security beyond the military perspective: International Law 'cyber space' and the concept of due diligence. JF - German Yearbook of International Law Y1 - 2015 VL - 58 SP - 51 EP - 66 PB - Duncker & Humblot CY - Berlin ER - TY - CHAP A1 - Zimmermann, Andreas ED - von der Groeben, Hans ED - Schwarze, Jürgen ED - Hatje, Armin T1 - Artikel 208 (Beitrag der Union; Ziel) T2 - Europäisches Unionsrecht : Vertrag über die Europäische Union Vertrag über die Arbeitsweise der Europäischen Union, Charta der Grundrechte der Europäischen Union ; EUV, AEUV, GRC Y1 - 2015 UR - https://beck-online.beck.de/Dokument?vpath=bibdata%2Fkomm%2Fgroebenschwarzekoeuv_7%2Faeuv%2Fcont%2Fgroebenschwarzekoeuv.aeuv.a208.htm&pos=5&hlwords=on SN - 978-3-8329-6019-3 VL - 4 SP - 352 EP - 376 PB - Nomos CY - Baden-Baden ET - 7. Aufl. ER - TY - CHAP A1 - Zimmermann, Andreas ED - von der Groeben, Hans ED - Schwarze, Jürgen ED - Hatje, Armin T1 - Artikel 210 (Koordinierung) T2 - Europäisches Unionsrecht : Vertrag über die Europäische Union Vertrag über die Arbeitsweise der Europäischen Union, Charta der Grundrechte der Europäischen Union ; EUV, AEUV, GRC Y1 - 2015 SN - 978-3-8329-6019-3 VL - Bd. 4 SP - 396 EP - 397 PB - Nomos CY - Baden-Baden ET - 7. Aufl. ER - TY - CHAP A1 - Zimmermann, Andreas T1 - Artikel 198 (Ziele der Assoziierung) BT - 4. Art. 174 bis 358 AEUV T2 - Europäisches Unionsrecht Y1 - 2015 SN - 978-3-8329-6019-3 SP - 244 EP - 247 PB - Nomos CY - Baden-Baden ET - 7. Aufl. ER - TY - CHAP A1 - Zimmermann, Andreas T1 - Article 8bis: Crime of Aggression T2 - The Rome Statute of the International Criminal Court Y1 - 2015 SP - 580 EP - 618 PB - Beck CY - München ET - 3. Aufl. ER - TY - JOUR A1 - Zimmermann, Andreas T1 - The Palestinian-Israeli Conflict: Developing International Law Without Solving the Conflict JF - Archiv des Völkerrechts N2 - The article analyses whether the Palestinian-Israeli conflict has served as a catalyst for the development of international law, as well as whether international law has been instrumental in attempting to find solutions for the said conflict. In several ways, this conflict has made a significant contribution to understanding and interpreting the UN Charter. It also brought along important developments about the role of third parties, both under the Geneva Conventions and under the law of state responsibility, which provides for an obligation of not recognizing as legal, or not rendering aid or assistance to situations caused by serious violations of jus cogens. International judicial institutions (and also domestic ones) play a rather limited role in this respect, due both to a lack of courage to address fundamental questions, and/or a disregard of the outcome of the proceedings by at least one of the parties to the conflict. Other reasons are Israel's reluctance of accepting the jurisdiction of either the ICJ or the ICC, and its view on the non-applicability of human rights treaties outside of its territory, as well as Palestine's uncertain status in the international community limiting its access to international courts. However, the ICJ's 2004 (formally non-binding) advisory opinion on the Israeli Wall provided answers to some of the most fundamental questions related to the conflict, unfortunately without having any immediate impact on the situation on the ground. Given Palestine's accession to the Rome Statute in early 2015, time has yet to show which role in the process will be played by the ICC. Other issues arising from the conflict, and examined by this article, are that of (Palestinian) statehood, going beyond the traditional concept of statehood and including the consequences of the jus cogens-character of the right of self-determination, as well as questions of treaty succession and succession in matters of State responsibility with regard to acts committed by the PLO. Y1 - 2015 U6 - https://doi.org/10.1628/000389215X14412717564749 VL - 53 IS - 2 SP - 149 EP - 166 PB - Mohr Siebeck CY - Tübingen ER - TY - CHAP A1 - Zimmermann, Andreas ED - von der Groeben, Hans ED - Schwarz, Jürgen ED - Hatje, Armin T1 - Die Assoziierung der überseeischen Länder und Hoheitsgebiete Vorbemerkung zu den Artikeln 198-204 T2 - Europäisches Unionsrecht : Vertrag über die Europäische Union, Vertrag über die Arbeitsweise der Europäischen Union, Charta der Grundrechte der Europäischen Union; 4: Art. 174 bis 358 AEUV KW - Vertrag über die Europäische Union KW - Europäische Union Vertrag über die Arbeitsweise der Europäischen Union KW - Europäische Union Charta der Grundrechte KW - Kommentar Y1 - 2015 SN - 978-3-8329-6019-3 IS - Teil 4 SP - 239 EP - 243 PB - Nomos CY - Baden-Baden ET - 7. Aufl. ER - TY - CHAP A1 - Zimmermann, Andreas ED - Calliess, Christian T1 - Organic links between the International Court of Justice and the other Principal Organs of the United Nations T2 - Herausforderungen an Staat und Verfassung: Völkerrecht-Europarecht-Menschenrechte; liber amicorum für Torsten Stein zum 70. Geburtstag KW - Völkerrecht KW - Europäische Union KW - Verfassungsrecht KW - Deutschland KW - Menschenrecht KW - Stein, Torsten Y1 - 2015 SN - 978-3-8487-1347-9 SP - 393 EP - 402 PB - Nomos CY - Baden-Baden ER - TY - CHAP A1 - Zimmermann, Andreas ED - von der Groeben, Hans ED - Schwarze, Jürgen ED - Hatje, Armin T1 - Artikel 209 (Mehrjahres- und thematische Programme; Vertragsschlusskompetenz; Rolle der EIB) T2 - Europäisches Unionsrecht : Europäisches Unionsrecht : Vertrag über die Europäische Union Vertrag über die Arbeitsweise der Europäischen Union, Charta der Grundrechte der Europäischen Union ; EUV, AEUV, GRC Y1 - 2015 SN - 978-3-8329-6019-3 VL - Bd. 4 SP - 377 EP - 395 PB - Nomos CY - Baden-Baden ET - 7. Aufl. ER - TY - CHAP A1 - Zimmermann, Andreas ED - von der Groeben, Hans ED - Schwarze, Jürgen ED - Hatje, Armin T1 - Artikel 202 (Regelung der Freizügigkeit der Arbeitskräfte) T2 - Europäisches Unionsrecht : Vertrag über die Europäische Union Vertrag über die Arbeitsweise der Europäischen Union, Charta der Grundrechte der Europäischen Union ; EUV, AEUV, GRC Y1 - 2015 SN - 978-3-8329-6019-3 VL - Bd. 4 SP - 255 EP - 255 PB - Nomos CY - Baden-Baden ET - 7. Aufl. ER - TY - CHAP A1 - Zimmermann, Andreas ED - von der Groeben, Hans ED - Schwarze, Jürgen ED - Hatje, Armin T1 - Artikel 200 (Verbot von Zöllen/Ausnahmen) T2 - Europäisches Unionsrecht : Vertrag über die Europäische Union Vertrag über die Arbeitsweise der Europäischen Union, Charta der Grundrechte der Europäischen Union ; EUV, AEUV, GRC Y1 - 2015 SN - 978-3-8329-6019-3 VL - Bd. 4 SP - 250 EP - 253 PB - Nomos CY - Baden-Baden ET - 7. Aufl. ER - TY - CHAP A1 - Zimmermann, Andreas ED - von der Groeben, Hans ED - Schwarze, Jürgen ED - Hatje, Armin T1 - Artikel 211 (Internationale Zusammenarbeit) T2 - Europäisches Unionsrecht : Vertrag über die Europäische Union Vertrag über die Arbeitsweise der Europäischen Union, Charta der Grundrechte der Europäischen Union ; EUV, AEUV, GRC Y1 - 2015 SN - 978-3-8329-6019-3 VL - Bd. 4 SP - 398 EP - 399 PB - Nomos CY - Baden-Baden ET - 7. Aufl. ER -