TY - JOUR A1 - Cesare, Bernardo A1 - Acosta-Vigil, Antonio A1 - Bartoli, Omar A1 - Ferrero, Silvio T1 - What can we learn from melt inclusions in migmatites and granulites? JF - Lithos : an international journal of mineralogy, petrology, and geochemistry N2 - With less than two decades of activity, research on melt inclusions (MI) in crystals from rocks that have undergone crustal anatexis - migmatites and granulites - is a recent addition to crustal petrology and geochemistry. Studies on this subject started with glassy inclusions in anatectic crustal enclaves in lavas, and then progressed to regionally metamorphosed and partially melted crustal rocks, where melt inclusions are normally crystallized into a cryptocrystalline aggregate (nanogranitoid). Since the first paper on melt inclusions in the granulites of the Kerala Khondalite Belt in 2009, reported and studied occurrences are already a few tens. Melt inclusions in migmatites and granulites show many analogies with their more common and long studied counterparts in igneous rocks, but also display very important differences and peculiarities, which are the subject of this review. Microstructurally, melt inclusions in anatectic rocks are small, commonly 10 mu m in diameter, and their main mineral host is peritectic garnet, although several other hosts have been observed. Inclusion contents vary from glass in enclaves that were cooled very rapidly from supersolidus temperatures, to completely crystallized material in slowly cooled regional migmatites. The chemical composition of the inclusions can be analyzed combining several techniques (SEM, EMP, NanoSIMS, LA-ICP-MS), but in the case of crystallized inclusions the experimental remelting under confining pressure in a piston cylinder is a prerequisite. The melt is generally granitic and peraluminous, although granodioritic to trondhjemitic compositions have also been found. Being mostly primary in origin, inclusions attest for the growth of their peritectic host in the presence of melt. As a consequence, the inclusions have the unique ability of preserving information on the composition of primary anatectic crustal melts, before they undergo any of the common following changes in their way to produce crustal magmas. For these peculiar features, melt inclusions in migmatites and granulites, largely overlooked so far, have the potential to become a fundamental tool for the study of crustal melting, crustal differentiation, and even the generation of the continental crust. (C) 2015 The Authors. Published by Elsevier B.V. KW - Melt inclusions KW - Migmatites KW - Granulites KW - Granites KW - Crustal melting KW - Nanogranitoids Y1 - 2015 U6 - https://doi.org/10.1016/j.lithos.2015.09.028 SN - 0024-4937 SN - 1872-6143 VL - 239 SP - 186 EP - 216 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Haßler, Gerda T1 - Wendy Ayres-Bennett; Magali Seijido: Bon usage et variation sociolinguistique. Perspectives diachroniques et traditions nationales / rezensiert von Gerda Haßler JF - Historiographia Linguistica : international journal for the history of the language sciences N2 - Rezensiertes Werk: Wendy Ayres-Bennett; Magali Seijido: Bon usage et variation sociolinguistique. Perspectives diachroniques et traditions nationales, Lyon: École normale supérieure de Lyon 2013, 338 S. KW - Normierung Soziolinguistik Y1 - 2015 U6 - https://doi.org/10.1075/hl.42.1.11has SN - 0302-5160 SN - 1569-9781 VL - 42 IS - 1 SP - 173 EP - 182 PB - John Benjamins CY - Amsterdam ER - TY - JOUR A1 - Bernhardt, Anne A1 - Melnick, Daniel A1 - Hebbeln, Dierk A1 - Lückge, Andreas A1 - Strecker, Manfred T1 - Turbidite paleoseismology along the active continental margin of Chile - Feasible or not? JF - Quaternary science reviews : the international multidisciplinary research and review journal N2 - Much progress has been made in estimating recurrence intervals of great and giant subduction earthquakes using terrestrial, lacustrine, and marine paleoseismic archives. Recent detailed records suggest these earthquakes may have variable recurrence periods and magnitudes forming supercycles. Understanding seismic supercycles requires long paleoseismic archives that record timing and magnitude of such events. Turbidite paleoseismic archives may potentially extend past earthquake records to the Pleistocene and can thus complement commonly shorter-term terrestrial archives. However, in order to unambiguously establish recurring seismicity as a trigger mechanism for turbidity currents, synchronous deposition of turbidites in widely spaced, isolated depocenters has to be ascertained. Furthermore, characteristics that predispose a seismically active continental margin to turbidite paleoseismology and the correct sample site selection have to be taken into account. Here we analyze 8 marine sediment cores along 950 km of the Chile margin to test for the feasibility of compiling detailed and continuous paleoseismic records based on turbidites. Our results suggest that the deposition of areally widespread, synchronous turbidites triggered by seismicity is largely controlled by sediment supply and, hence, the climatic and geomorphic conditions of the adjacent subaerial setting. The feasibility of compiling a turbidite paleoseismic record depends on the delicate balance between sufficient sediment supply providing material to fail frequently during seismic shaking and sufficiently low sedimentation rates to allow for coeval accumulation of planktonic foraminifera for high-resolution radiocarbon dating. We conclude that offshore northern central Chile (29-32.5 degrees S) Holocene turbidite paleoseismology is not feasible, because sediment supply from the semi-arid mainland is low and almost no Holocene turbidity-current deposits are found in the cores. In contrast, in the humid region between 36 and 38 degrees S frequent Holocene turbidite deposition may generally correspond to paleoseismic events. However, high terrigenous sedimentation rates prevent high-resolution radiocarbon dating. The climatic transition region between 32.5 and 36 degrees S appears to be best suited for turbidite paleoseismology. (C) 2015 Elsevier Ltd. All rights reserved. KW - Turbidite paleoseismology KW - Chile convergent margin KW - Earthquake KW - Seismoturbidites Y1 - 2015 U6 - https://doi.org/10.1016/j.quascirev.2015.04.001 SN - 0277-3791 VL - 120 SP - 71 EP - 92 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Prüfer, Nicole A1 - Kleuser, Burkhard A1 - van der Giet, Markus T1 - The role of serum amyloid A and sphingosine-1-phosphate on high-density lipoprotein functionality JF - Biological chemistry N2 - The high-density lipoprotein (HDL) is one of the most important endogenous cardiovascular protective markers. HDL is an attractive target in the search for new pharmaceutical therapies and in the prevention of cardiovascular events. Some of HDL's anti-atherogenic properties are related to the signaling molecule sphingosine-1-phosphate (S1P), which plays an important role in vascular homeostasis. However, for different patient populations it seems more complicated. Significant changes in HDL's protective potency are reduced under pathologic conditions and HDL might even serve as a proatherogenic particle. Under uremic conditions especially there is a change in the compounds associated with HDL. S1P is reduced and acute phase proteins such as serum amyloid A (SAA) are found to be elevated in HDL. The conversion of HDL in inflammation changes the functional properties of HDL. High amounts of SAA are associated with the occurrence of cardiovascular diseases such as atherosclerosis. SAA has potent pro-atherogenic properties, which may have impact on HDL's biological functions, including cholesterol efflux capacity, antioxidative and anti-inflammatory activities. This review focuses on two molecules that affect the functionality of HDL. The balance between functional and dysfunctional HDL is disturbed after the loss of the protective sphingolipid molecule S1P and the accumulation of the acute-phase protein SAA. This review also summarizes the biological activities of lipid-free and lipid-bound SAA and its impact on HDL function. KW - atherosclerosis KW - high-density lipoprotein (HDL) KW - inflammation KW - serum amyloid A (SAA) KW - sphingosine-1-phosphate (S1P) Y1 - 2015 U6 - https://doi.org/10.1515/hsz-2014-0192 SN - 1431-6730 SN - 1437-4315 VL - 396 IS - 6-7 SP - 573 EP - 583 PB - De Gruyter CY - Berlin ER - TY - JOUR A1 - Yokoyama, Kenichi A1 - Leimkühler, Silke T1 - The role of FeS clusters for molybdenum cofactor biosynthesis and molybdoenzymes in bacteria JF - Biochimica et biophysica acta : Molecular cell research N2 - The biosynthesis of the molybdenum cofactor (Moco) has been intensively studied, in addition to its insertion into molybdoenzymes. In particular, a link between the assembly of molybdoenzymes and the biosynthesis of FeS clusters has been identified in the recent years: 1) the synthesis of the first intermediate in Moco biosynthesis requires an FeS-cluster containing protein, 2) the sulfurtransferase for the dithiolene group in Moco is also involved in the synthesis of FeS clusters, thiamin and thiolated tRNAs, 3) the addition of a sulfido-ligand to the molybdenum atom in the active site additionally involves a sulfurtransferase, and 4) most molybdoenzymes in bacteria require FeS clusters as redox active cofactors. In this review we will focus on the biosynthesis of the molybdenum cofactor in bacteria, its modification and insertion into molybdoenzymes, with an emphasis to its link to FeS cluster biosynthesis and sulfur transfer. (C) 2014 Elsevier B.V. All rights reserved. KW - Molybdenum-iron-iron-sulfur cluster KW - Molybdenum cofactor KW - tRNA KW - Sulfur transfer KW - L-Cysteine desulfurase Y1 - 2015 U6 - https://doi.org/10.1016/j.bbamcr.2014.09.021 SN - 0167-4889 SN - 0006-3002 VL - 1853 IS - 6 SP - 1335 EP - 1349 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Jacobi, Juliane T1 - The Chosen Few: How Education Shaped Jewish History (70 - 1492) JF - Paedagogica historica : international journal of the history of education Y1 - 2015 U6 - https://doi.org/10.1080/00309230.2014.895117 SN - 0030-9230 SN - 1477-674X VL - 51 IS - 1-2 SP - 243 EP - 246 PB - Routledge, Taylor & Francis Group CY - Abingdon ER - TY - JOUR A1 - Acharya, B. S. A1 - Aramo, C. A1 - Babic, A. A1 - Barrio, J. A. A1 - Baushev, Anton N. A1 - Tjus, J. Becker A1 - Berge, David A1 - Bohacova, M. A1 - Bonardi, A. A1 - Brown, A. A1 - Bugaev, V. A1 - Bulik, Tomasz A1 - Burton, M. A1 - Busetto, G. A1 - Caraveo, P. A. A1 - Carosi, R. A1 - Carr, John A1 - Chadwick, Paula M. A1 - Chudoba, J. A1 - Conforti, V. A1 - Connaughton, V. A1 - Contreras, J. L. A1 - Cotter, G. A1 - Dazzi, F. A1 - De Franco, A. A1 - de la Calle, I. A1 - Lopez, R. de los Reyes A1 - De Lotto, B. A1 - De Palma, F. A1 - Di Girolamo, T. A1 - Di Giulio, C. A1 - Di Pierro, F. A1 - Dournaux, J. -L. A1 - Dwarkadas, Vikram V. A1 - Ebr, J. A1 - Egberts, Kathrin A1 - Fesquet, M. A1 - Fleischhack, H. A1 - Font, L. A1 - Fontaine, G. A1 - Foerster, A. A1 - Füßling, Matthias A1 - Garcia, B. A1 - Lopez, R. Garcia A1 - Garczarczyk, M. A1 - Gargano, F. A1 - Garrido, D. A1 - Gaug, M. A1 - Giglietto, N. A1 - Giordano, F. A1 - Giuliani, A. A1 - Godinovic, N. A1 - Gonzalez, M. M. A1 - Grabarczyk, T. A1 - Hassan, T. A1 - Hoerandel, J. A1 - Hrabovsky, M. A1 - Hrupec, D. A1 - Humensky, T. B. A1 - Huovelin, J. A1 - Jamrozy, M. A1 - Janecek, P. A1 - Kaaret, P. E. A1 - Katz, U. A1 - Kaufmann, S. A1 - Khelifi, B. A1 - Kluzniak, W. A1 - Kocot, J. A1 - Komin, N. A1 - Kubo, H. A1 - Kushida, J. A1 - Lamanna, G. A1 - Lee, W. H. A1 - Lenain, J. -P. A1 - Lohse, T. A1 - Lombardi, S. A1 - Lopez-Coto, R. A1 - Lopez-Oramas, A. A1 - Lucarelli, F. A1 - Maccarone, M. C. A1 - Maier, G. A1 - Majumdar, P. A1 - Malaguti, G. A1 - Mandat, D. A1 - Mazziotta, Mario Nicola A1 - Meagher, K. A1 - Mirabal, N. A1 - Morselli, A. A1 - Moulin, Emmanuel A1 - Niemiec, J. A1 - Nievas, M. A1 - Nishijima, K. A1 - Nosek, D. A1 - Nunio, F. A1 - Ohishi, M. A1 - Ohm, S. A1 - Ong, R. A. A1 - Orito, R. A1 - Otte, N. A1 - Palatka, M. A1 - Pareschi, G. A1 - Pech, M. A1 - Persic, M. A1 - Pohl, Manuela A1 - Prouza, M. A1 - Quirrenbach, A. A1 - Raino, S. A1 - Fernandez, G. Rodriguez A1 - Romano, Patrizia A1 - Rovero, A. C. A1 - Rudak, B. A1 - Schovanek, P. A1 - Shayduk, M. A1 - Siejkowski, H. A1 - Sillanpaa, A. A1 - Stefanik, S. A1 - Stolarczyk, T. A1 - Szanecki, M. A1 - Szepieniec, T. A1 - Tejedor, L. A. A1 - Telezhinsky, Igor O. A1 - Teshima, M. A1 - Tibaldo, L. A1 - Tibolla, O. A1 - Tovmassian, G. A1 - Travnicek, P. A1 - Trzeciak, M. A1 - Vallania, P. A1 - van Eldik, C. A1 - Vercellone, S. A1 - Vigorito, C. A1 - Wagner, S. J. A1 - Wakely, S. P. A1 - Weinstein, A. A1 - Wierzcholska, A. A1 - Wilhelm, Alina A1 - Wojcik, P. A1 - Yoshikoshi, T. T1 - The Cherenkov Telescope Array potential for the study of young supernova remnants JF - Astroparticle physics N2 - Supernova remnants (SNRs) are among the most important targets for gamma-ray observatories. Being prominent non-thermal sources, they are very likely responsible for the acceleration of the bulk of Galactic cosmic rays (CRS). To firmly establish the SNR paradigm for the origin of cosmic rays, it should be confirmed that protons are indeed accelerated in, and released from, SNRs with the appropriate flux and spectrum. This can be done by detailed theoretical models which account for microphysics of acceleration and various radiation processes of hadrons and leptons. The current generation of Cherenkov telescopes has insufficient sensitivity to constrain theoretical models. A new facility, the Cherenkov Telescope Array (CTA), will have superior capabilities and may finally resolve this long standing issue of high-energy astrophysics. We want to assess the capabilities of CTA to reveal the physics of various types of SNRs in the initial 2000 years of their evolution. During this time, the efficiency to accelerate cosmic rays is highest. We perform time-dependent simulations of the hydrodynamics, the magnetic fields, the cosmic-ray acceleration, and the non-thermal emission for type Ia, Ic and IIP SNRs. We calculate the CTA response to the y-ray emission from these SNRs for various ages and distances, and we perform a realistic analysis of the simulated data. We derive distance limits for the detectability and resolvability of these SNR types at several ages. We test the ability of CTA to reconstruct their morphological and spectral parameters as a function of their distance. Finally, we estimate how well CTA data will constrain the theoretical models. (C) 2014 Elsevier B.V. All rights reserved. KW - Acceleration of particles KW - Gamma rays: General KW - ISM: Supernova remnants KW - Radiation mechanisms: Non-termal Y1 - 2015 U6 - https://doi.org/10.1016/j.astropartphys.2014.08.005 SN - 0927-6505 SN - 1873-2852 VL - 62 SP - 152 EP - 164 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Mendel, Ralf R. A1 - Leimkühler, Silke T1 - The biosynthesis of the molybdenum cofactors JF - Journal of biological inorganic chemistry N2 - The biosynthesis of the molybdenum cofactors (Moco) is an ancient, ubiquitous, and highly conserved pathway leading to the biochemical activation of molybdenum. Moco is the essential component of a group of redox enzymes, which are diverse in terms of their phylogenetic distribution and their architectures, both at the overall level and in their catalytic geometry. A wide variety of transformations are catalyzed by these enzymes at carbon, sulfur and nitrogen atoms, which include the transfer of an oxo group or two electrons to or from the substrate. More than 50 molybdoenzymes were identified to date. In all molybdoenzymes except nitrogenase, molybdenum is coordinated to a dithiolene group on the 6-alkyl side chain of a pterin called molybdopterin (MPT). The biosynthesis of Moco can be divided into three general steps, with a fourth one present only in bacteria and archaea: (1) formation of the cyclic pyranopterin monophosphate, (2) formation of MPT, (3) insertion of molybdenum into molybdopterin to form Moco, and (4) additional modification of Moco in bacteria with the attachment of a nucleotide to the phosphate group of MPT, forming the dinucleotide variant of Moco. This review will focus on the biosynthesis of Moco in bacteria, humans and plants. KW - Molybdenum KW - Molybdenum cofactor KW - cPMP KW - bis-MGD KW - Sulfuration KW - Sulfite oxidase Y1 - 2015 U6 - https://doi.org/10.1007/s00775-014-1173-y SN - 0949-8257 SN - 1432-1327 VL - 20 IS - 2 SP - 337 EP - 347 PB - Springer CY - New York ER - TY - JOUR A1 - Schaeffner, Melanie A1 - Hüttermann, Hendrik A1 - Gebert, Diether A1 - Boerner, Sabine A1 - Kearney, Eric A1 - Song, Lynda Jiwen T1 - Swim or Sink Together: The Potential of Collective Team Identification and Team Member Alignment for Separating Task and Relationship Conflicts JF - Group & organization management N2 - This article investigates collective team identification and team member alignment (i.e., the existence of short- and long-term team goals and team-based reward structures) as moderators of the association between task and relationship conflicts. Being indicators of cooperative goal interdependence in teams, both moderators are hypothesized to mitigate the positive association between the two conflict types. Findings from 88 development teams confirm the moderating effect for collective team identification, but not for team member alignment. Moreover, the moderating role of collective team identification is found to be dependent on the level of task conflict: It is more effective in decoupling task and relationship conflicts at medium as compared with high or low levels of task conflict. KW - task conflict KW - relationship conflict KW - collective team identification KW - team member alignment KW - cooperative goal interdependence Y1 - 2015 U6 - https://doi.org/10.1177/1059601114561059 SN - 1059-6011 SN - 1552-3993 VL - 40 IS - 4 SP - 467 EP - 499 PB - Sage Publ. CY - Thousand Oaks ER - TY - JOUR A1 - Wu, Lei A1 - Glebe, Ulrich A1 - Böker, Alexander T1 - Surface-initiated controlled radical polymerizations from silica nanoparticles, gold nanocrystals, and bionanoparticles JF - Polymer Chemistry N2 - In recent years, core/shell nanohybrids containing a nanoparticle core and a distinct surrounding shell of polymer brushes have received extensive attention in nanoelectronics, nanophotonics, catalysis, nanopatterning, drug delivery, biosensing, and many others. From the large variety of existing polymerization methods on the one hand and strategies for grafting onto nanoparticle surfaces on the other hand, the combination of grafting-from with controlled radical polymerization (CRP) techniques has turned out to be the best suited for synthesizing these well-defined core/shell nanohybrids and is known as surface-initiated CRP. Most common among these are surface-initiated atom transfer radical polymerization (ATRP), surface-initiated reversible addition-fragmentation chain transfer (RAFT) polymerization, and surface-initiated nitroxide-mediated polymerization (NMP). This review highlights the state of the art of growing polymers from nanoparticles using surface-initiated CRP techniques. We focus on mechanistic aspects, synthetic procedures, and the formation of complex architectures as well as novel properties. From the vast number of examples of nanoparticle/polymer hybrids formed by surface-initiated CRP techniques, we present nanohybrid formation from the particularly important and most studied silica nanoparticles, gold nanocrystals, and proteins which can be regarded as bionanoparticles. Y1 - 2015 U6 - https://doi.org/10.1039/c5py00525f SN - 1759-9954 SN - 1759-9962 VL - 6 IS - 29 SP - 5143 EP - 5184 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Hortobagyi, Tibor A1 - Lesinski, Melanie A1 - Fernandez-del-Olmo, Miguel A1 - Granacher, Urs T1 - Small and inconsistent effects of whole body vibration on athletic performance: a systematic review and meta-analysis JF - European journal of applied physiology N2 - We quantified the acute and chronic effects of whole body vibration on athletic performance or its proxy measures in competitive and/or elite athletes. Systematic literature review and meta-analysis. Whole body vibration combined with exercise had an overall 0.3 % acute effect on maximal voluntary leg force (-6.4 %, effect size = -0.43, 1 study), leg power (4.7 %, weighted mean effect size = 0.30, 6 studies), flexibility (4.6 %, effect size = -0.12 to 0.22, 2 studies), and athletic performance (-1.9 %, weighted mean effect size = 0.26, 6 studies) in 191 (103 male, 88 female) athletes representing eight sports (overall effect size = 0.28). Whole body vibration combined with exercise had an overall 10.2 % chronic effect on maximal voluntary leg force (14.6 %, weighted mean effect size = 0.44, 5 studies), leg power (10.7 %, weighted mean effect size = 0.42, 9 studies), flexibility (16.5 %, effect size = 0.57 to 0.61, 2 studies), and athletic performance (-1.2 %, weighted mean effect size = 0.45, 5 studies) in 437 (169 male, 268 female) athletes (overall effect size = 0.44). Whole body vibration has small and inconsistent acute and chronic effects on athletic performance in competitive and/or elite athletes. These findings lead to the hypothesis that neuromuscular adaptive processes following whole body vibration are not specific enough to enhance athletic performance. Thus, other types of exercise programs (e.g., resistance training) are recommended if the goal is to improve athletic performance. KW - Exercise KW - Muscle KW - Force KW - Power KW - Skill KW - Reflex KW - Endocrine KW - Metabolism Y1 - 2015 U6 - https://doi.org/10.1007/s00421-015-3194-9 SN - 1439-6319 SN - 1439-6327 VL - 115 IS - 8 SP - 1605 EP - 1625 PB - Springer CY - New York ER - TY - JOUR A1 - Vogt, Julia H. M. A1 - Schippers, Jos H. M. T1 - Setting the PAS, the role of circadian PAS domain proteins during environmental adaptation in plants JF - Frontiers in plant science N2 - The per-ARNT-sim (PAS) domain represents an ancient protein module that can be found across all kingdoms of life. The domain functions as a sensing unit for a diverse array of signals, including molecular oxygen, small metabolites, and light. In plants, several PAS domain-containing proteins form an integral part of the circadian clock and regulate responses to environmental change. Moreover, these proteins function in pathways that control development and plant stress adaptation responses. Here, we discuss the role of PAS domain-containing proteins in anticipation, and adaptation to environmental changes in plants. KW - PAS domain KW - circadian clock KW - signal transduction KW - environmental stress response KW - growth adaptation Y1 - 2015 U6 - https://doi.org/10.3389/fpls.2015.00513 SN - 1664-462X VL - 6 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Petrov, Veselin A1 - Hille, Jacques A1 - Müller-Röber, Bernd A1 - Gechev, Tsanko S. T1 - ROS-mediated abiotic stress-induced programmed cell death in plants JF - Frontiers in plant science N2 - During the course of their ontogenesis plants are continuously exposed to a large variety of abiotic stress factors which can damage tissues and jeopardize the survival of the organism unless properly countered. While animals can simply escape and thus evade stressors, plants as sessile organisms have developed complex strategies to withstand them. When the intensity of a detrimental factor is high, one of the defense programs employed by plants is the induction of programmed cell death (PCD). This is an active, genetically controlled process which is initiated to isolate and remove damaged tissues thereby ensuring the survival of the organism. The mechanism of PCD induction usually includes an increase in the levels of reactive oxygen species (ROS) which are utilized as mediators of the stress signal. Abiotic stress-induced PCD is not only a process of fundamental biological importance, but also of considerable interest to agricultural practice as it has the potential to significantly influence crop yield. Therefore, numerous scientific enterprises have focused on elucidating the mechanisms leading to and controlling PCD in response to adverse conditions in plants. This knowledge may help develop novel strategies to obtain more resilient crop varieties with improved tolerance and enhanced productivity. The aim of the present review is to summarize the recent advances in research on ROS-induced PCD related to abiotic stress and the role of the organelles in the process. KW - abiotic stress KW - programmed cell death KW - reactive oxygen species KW - signal transduction KW - stress adaptation Y1 - 2015 U6 - https://doi.org/10.3389/fpls.2015.00069 SN - 1664-462X VL - 6 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Campbell, Kevin L. A1 - Hofreiter, Michael T1 - Resurrecting phenotypes from ancient DNA sequences: promises and perspectives JF - Canadian journal of zoology = Revue canadienne de zoologie N2 - Anatomical changes in extinct mammalian lineages over evolutionary time, such as the loss of fingers and teeth and the rapid increase in body size that accompanied the late Miocene dispersal of the progenitors of Steller's sea cows (Hydrodamalis gigas (Zimmermann, 1780)) into North Pacific waters and the convergent development of a thick pelage and accompanying reductions in ear and tail surface area of woolly mammoths (Mammuthus primigenius (Blumenbach, 1799)) and woolly rhinoceros (Coelodonta antiquitatis (Blumenbach, 1799)), are prime examples of adaptive evolution underlying the exploitation of new habitats. It is likely, however, that biochemical specializations adopted during these evolutionary transitions were of similar or even greater biological importance. As these "living" processes do not fossilize, direct information regarding the physiological attributes of extinct species has largely remained beyond the range of scientific inquiry. However, the ability to retrieve genomic sequences from ancient DNA samples, combined with ectopic expression systems, now permit the evolutionary origins and structural and functional properties of authentic prehistoric proteins to be examined in great detail. Exponential technical advances in ancient DNA retrieval, enrichment, and sequencing will soon permit targeted generation of complete genomes from hundreds of extinct species across the last one million years that, in combination with emerging in vitro expression, genome engineering, and cell differentiation techniques, promises to herald an exciting new trajectory of evolutionary research at the interface of biochemistry, genomics, palaeontology, and cell biology. KW - paleophysiology KW - ancient DNA KW - extinct species KW - adaptation KW - protein structure Y1 - 2015 U6 - https://doi.org/10.1139/cjz-2014-0337 SN - 0008-4301 SN - 1480-3283 VL - 93 IS - 9 SP - 701 EP - 710 PB - NRC Research Press CY - Ottawa ER - TY - JOUR A1 - Witzel, Katja A1 - Neugart, Susanne A1 - Ruppel, Silke A1 - Schreiner, Monika A1 - Wiesner, Melanie A1 - Baldermann, Susanne T1 - Recent progress in the use of 'omics technologies in brassicaceous vegetables JF - Frontiers in plant science N2 - Continuing advances in 'omics methodologies and instrumentation is enhancing the understanding of how plants cope with the dynamic nature of their growing environment. 'Omics platforms have been only recently extended to cover horticultural crop species. Many of the most widely cultivated vegetable crops belong to the genus Brassica: these include plants grown for their root (turnip, rutabaga/swede), their swollen stem base (kohlrabi), their leaves (cabbage, kale, pak choi) and their inflorescence (cauliflower, broccoli). Characterization at the genome, transcript, protein and metabolite levels has illustrated the complexity of the cellular response to a whole series of environmental stresses, including nutrient deficiency, pathogen attack, heavy metal toxicity, cold acclimation, and excessive and sub optimal irradiation. This review covers recent applications of omics technologies to the brassicaceous vegetables, and discusses future scenarios in achieving improvements in crop end-use quality. KW - genomics KW - transcriptomics KW - metabolomics KW - proteomics KW - crop KW - microbiomics Y1 - 2015 U6 - https://doi.org/10.3389/fpls.2015.00244 SN - 1664-462X VL - 6 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Vankar, Yashwant D. A1 - Linker, Torsten T1 - Recent Developments in the Synthesis of 2-C-Branched and 1,2-Annulated Carbohydrates JF - European journal of organic chemistry N2 - The importance of carbohydrate chemistry in biological and medicinal chemistry has led to enormous developments in the synthesis of carbohydrate mimics. In this context, the synthesis of branched sugars in general and of 2-C-branched carbohydrates in particular, as well as the synthesis of 1,2-annulated sugars, have received immense attention. They serve not only as carbohydrate mimics in the form of stand-alone molecules, but also as useful intermediates in the synthesis of many natural products, their analogues, and glycosidase inhibitors. This microreview covers the recent synthetic efforts in this area and puts the subject matter into proper perspective for future developments. KW - Synthetic methods KW - Annulation KW - Carbohydrates KW - Carbohydrate mimics Y1 - 2015 U6 - https://doi.org/10.1002/ejoc.201501176 SN - 1434-193X SN - 1099-0690 IS - 35 SP - 7633 EP - 7642 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Knapp, Michael A1 - Lalueza-Fox, Carles A1 - Hofreiter, Michael T1 - Re-inventing ancient human DNA JF - Investigative Genetics N2 - For a long time, the analysis of ancient human DNA represented one of the most controversial disciplines in an already controversial field of research. Scepticism in this field was only matched by the long-lasting controversy over the authenticity of ancient pathogen DNA. This ambiguous view on ancient human DNA had a dichotomous root. On the one hand, the interest in ancient human DNA is great because such studies touch on the history and evolution of our own species. On the other hand, because these studies are dealing with samples from our own species, results are easily compromised by contamination of the experiments with modern human DNA, which is ubiquitous in the environment. Consequently, some of the most disputed studies published - apart maybe from early reports on million year old dinosaur or amber DNA - reported DNA analyses from human subfossil remains. However, the development of so-called next-or second-generation sequencing (SGS) in 2005 and the technological advances associated with it have generated new confidence in the genetic study of ancient human remains. The ability to sequence shorter DNA fragments than with PCR amplification coupled to traditional Sanger sequencing, along with very high sequencing throughput have both reduced the risk of sequencing modern contamination and provided tools to evaluate the authenticity of DNA sequence data. The field is now rapidly developing, providing unprecedented insights into the evolution of our own species and past human population dynamics as well as the evolution and history of human pathogens and epidemics. Here, we review how recent technological improvements have rapidly transformed ancient human DNA research from a highly controversial subject to a central component of modern anthropological research. We also discuss potential future directions of ancient human DNA research. KW - Archaic humans KW - Human evolution KW - Human population genomics KW - Next/second-generation sequencing Y1 - 2015 U6 - https://doi.org/10.1186/s13323-015-0020-4 SN - 2041-2223 VL - 6 PB - BioMed Central CY - London ER - TY - JOUR A1 - Hixson, Stefanie M. A1 - Sharma, Bhanu A1 - Kainz, Martin J. A1 - Wacker, Alexander A1 - Arts, Michael T. T1 - Production, distribution, and abundance of long-chain omega-3 polyunsaturated fatty acids: a fundamental dichotomy between freshwater and terrestrial ecosystems JF - Environmental reviews = Dossiers environnement N2 - Long-chain polyunsaturated fatty acids (LC-PUFA) are critical for the health of aquatic and terrestrial organisms; therefore, understanding the production, distribution, and abundance of these compounds is imperative. Although the dynamics of LC-PUFA production and distribution in aquatic environments has been well documented, a systematic and comprehensive comparison to LC-PUFA in terrestrial environments has not been rigorously investigated. Here we use a data synthesis approach to compare and contrast fatty acid profiles of 369 aquatic and terrestrial organisms. Habitat and trophic level were interacting factors that determined the proportion of individual omega-3 (n-3) or omega-6 (n-6) PUFA in aquatic and terrestrial organisms. Higher total n-3 content compared with n-6 PUFA and a strong prevalence of the n-3 PUFA eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) characterized aquatic versus terrestrial organisms. Conversely, terrestrial organisms had higher linoleic acid (LNA) and alpha-linolenic acid (ALA) contents than aquatic organisms; however, the ratio of ALA: LNA was higher in aquatic organisms. The EPA + DHA content was higher in aquatic animals than terrestrial organisms, and increased from algae to invertebrates to vertebrates in the aquatic environment. An analysis of covariance (ANCOVA) revealed that fatty acid composition was highly dependent on the interaction between habitat and trophic level. We conclude that freshwater ecosystems provide an essential service through the production of n-3 LC-PUFA that are required to maintain the health of terrestrial organisms including humans. KW - aquatic ecosystems KW - conservation KW - eicosapentaenoic acid KW - docosahexaenoic acid KW - food webs Y1 - 2015 U6 - https://doi.org/10.1139/er-2015-0029 SN - 1208-6053 SN - 1181-8700 VL - 23 IS - 4 SP - 414 EP - 424 PB - NRC Research Press CY - Ottawa ER - TY - JOUR A1 - Schulz, Michael Karl T1 - Politics and Law: Perspective Series of German-Jewish History JF - German history : the journal of the German History Societ Y1 - 2015 SN - 0266-3554 SN - 1477-089X VL - 33 IS - 1 SP - 145 EP - 147 PB - Oxford Univ. Press CY - Oxford ER - TY - JOUR A1 - Spahn, Hannah T1 - Poetics of character: transatlantic encounters, 1700-1900 JF - EARLY AMERICAN LITERATURE Y1 - 2015 SN - 0012-8163 SN - 1534-147X VL - 50 IS - 2 SP - 616 EP - 621 PB - Univ. of North Carolina Press CY - Chapel Hill ER -