TY - JOUR A1 - Grewe, Volker A1 - Brinkop, Sabine A1 - Joeckel, Patrick A1 - Shin, Seoleun A1 - Reich, Sebastian A1 - Yserentant, Harry T1 - On the theory of mass conserving transformations for Lagrangian methods in 3D atmosphere-chemistry models JF - Meteorologische Zeitschrift KW - Lagrangian modelling KW - chemistry KW - transformations Y1 - 2014 U6 - https://doi.org/10.1127/0941-2948/2014/0552 SN - 0941-2948 SN - 1610-1227 VL - 23 IS - 4 SP - 441 EP - 447 PB - Schweizerbart CY - Stuttgart ER - TY - GEN A1 - Kuik, Friderike A1 - Lauer, Axel A1 - Churkina, Galina A1 - Denier Van der Gon, Hugo Anne Cornelis A1 - Fenner, Daniel A1 - Mar, Kathleen A. A1 - Butler, Tim M. T1 - Air quality modelling in the Berlin–Brandenburg region using WRF-Chem v3.7.1 BT - sensitivity to resolution of model grid and input data T2 - Postprints der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe N2 - Air pollution is the number one environmental cause of premature deaths in Europe. Despite extensive regulations, air pollution remains a challenge, especially in urban areas. For studying summertime air quality in the Berlin-Brandenburg region of Germany, the Weather Research and Forecasting Model with Chemistry (WRF-Chem) is set up and evaluated against meteorological and air quality observations from monitoring stations as well as from a field campaign conducted in 2014. The objective is to assess which resolution and level of detail in the input data is needed for simulating urban background air pollutant concentrations and their spatial distribution in the Berlin-Brandenburg area. The model setup includes three nested domains with horizontal resolutions of 15, 3 and 1 km and anthropogenic emissions from the TNO-MACC III inventory. We use RADM2 chemistry and the MADE/SORGAM aerosol scheme. Three sensitivity simulations are conducted updating input parameters to the single-layer urban canopy model based on structural data for Berlin, specifying land use classes on a sub-grid scale (mosaic option) and downscaling the original emissions to a resolution of ca. 1 km x 1 km for Berlin based on proxy data including traffic density and population density. The results show that the model simulates meteorology well, though urban 2m temperature and urban wind speeds are biased high and nighttime mixing layer height is biased low in the base run with the settings described above. We show that the simulation of urban meteorology can be improved when specifying the input parameters to the urban model, and to a lesser extent when using the mosaic option. On average, ozone is simulated reasonably well, but maximum daily 8 h mean concentrations are underestimated, which is consistent with the results from previous modelling studies using the RADM2 chemical mechanism. Particulate matter is underestimated, which is partly due to an underestimation of secondary organic aerosols. NOx (NO + NO2) concentrations are simulated reasonably well on average, but nighttime concentrations are overestimated due to the model's underestimation of the mixing layer height, and urban daytime concentrations are underestimated. The daytime underestimation is improved when using downscaled, and thus locally higher emissions, suggesting that part of this bias is due to deficiencies in the emission input data and their resolution. The results further demonstrate that a horizontal resolution of 3 km improves the results and spatial representativeness of the model compared to a horizontal resolution of 15 km. With the input data (land use classes, emissions) at the level of detail of the base run of this study, we find that a horizontal resolution of 1 km does not improve the results compared to a resolution of 3 km. However, our results suggest that a 1 km horizontal model resolution could enable a detailed simulation of local pollution patterns in the Berlin-Brandenburg region if the urban land use classes, together with the respective input parameters to the urban canopy model, are specified with a higher level of detail and if urban emissions of higher spatial resolution are used. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 531 KW - urban canopy model KW - aqmeii phase-2 KW - Mexico-City KW - Heat-Island KW - ozone KW - performance KW - transport KW - chemistry KW - meteorology KW - simulation Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-410131 SN - 1866-8372 IS - 531 ER - TY - THES A1 - Vacogne, Charlotte D. T1 - New synthetic routes towards well-defined polypeptides, morphologies and hydrogels T1 - Neue Syntheserouten zu wohldefinierten Polypeptiden, Morphologien und Hydrogelen N2 - Proteins are natural polypeptides produced by cells; they can be found in both animals and plants, and possess a variety of functions. One of these functions is to provide structural support to the surrounding cells and tissues. For example, collagen (which is found in skin, cartilage, tendons and bones) and keratin (which is found in hair and nails) are structural proteins. When a tissue is damaged, however, the supporting matrix formed by structural proteins cannot always spontaneously regenerate. Tailor-made synthetic polypeptides can be used to help heal and restore tissue formation. Synthetic polypeptides are typically synthesized by the so-called ring opening polymerization (ROP) of α-amino acid N-carboxyanhydrides (NCA). Such synthetic polypeptides are generally non-sequence-controlled and thus less complex than proteins. As such, synthetic polypeptides are rarely as efficient as proteins in their ability to self-assemble and form hierarchical or structural supramolecular assemblies in water, and thus, often require rational designing. In this doctoral work, two types of amino acids, γ-benzyl-L/D-glutamate (BLG / BDG) and allylglycine (AG), were selected to synthesize a series of (co)polypeptides of different compositions and molar masses. A new and versatile synthetic route to prepare polypeptides was developed, and its mechanism and kinetics were investigated. The polypeptide properties were thoroughly studied and new materials were developed from them. In particular, these polypeptides were able to aggregate (or self-assemble) in solution into microscopic fibres, very similar to those formed by collagen. By doing so, they formed robust physical networks and organogels which could be processed into high water-content, pH-responsive hydrogels. Particles with highly regular and chiral spiral morphologies were also obtained by emulsifying these polypeptides. Such polypeptides and the materials derived from them are, therefore, promising candidates for biomedical applications. N2 - Proteine, auch Polypeptide genannt, sind große Biomoleküle, die aus kleineren Aminosäuren bestehen. Diese sind zu langen Ketten miteinander verbunden, wie die Perlen auf einer Perlenkette. Sie werden in Zellen produziert, können in Tieren und Pflanzen gefunden werden und haben vielfältige Funktionen. Eine dieser Funktionen ist es, die umgebenen Zellen und Gewebe wie ein Gerüst zu stützen. Kollagen (welches in Haut, Knorpel, Sehnen und Knochen zu finden ist) und Keratin (welches in Haaren und Nägeln vorkommt) gehören zu diesen Strukturproteinen. Jedoch wenn ein Gewebe beschädigt ist, beispielsweise als Folge eines Unfalls, kann sich das Grundgerüst aus diesen Strukturproteinen manchmal nicht mehr selbst regenerieren. Maßgefertigte synthetische Polypeptide, können dafür verwendet werden, die Heilung und Wiederherstellung des Gewebes zu Unterstützen. Diese Polypeptide werden mit einer Reihe an chemischen Reaktionen synthetisiert, welche hauptsächlich darauf abzielen Aminosäuren miteinander zu verknüpfen. Synthetische Polypeptide sind weniger Komplex als die von Zellen hergestellten, natürlichen Polypeptide (Proteine). Während in den natürlichen Polypeptiden die Aminosäuren in einer von der DNA definierten Reihenfolge, welche als Sequenz bezeichnet wird, angeordnet sind, sind sie in synthetischen Polypeptiden zumeist zufällig verteilt. Die Konsequenz daraus ist, dass synthetische Polypeptide nicht immer so Leistungsfähig sind wie natürliche Proteine und ein durchdachtes Design benötigen. Zwei Aminosäuren wurden in dieser Dissertation sorgfältig ausgewählt und verwendet um eine Serie an Polypeptiden mit unterschiedlicher Zusammensetzung und Länge zu synthetisieren. Ein neuer und vielseitiger Syntheseweg wurde ebenfalls entwickelt und der zugrundeliegende Mechanismus untersucht. Die Polypeptide wurden gründlich analysiert und neue Materialien wurden aus ihnen entwickelt. In Lösung gebracht formten diese Fasern, ähnlich denen von Kollagen, welche sich wiederum zu robusten Netzwerken anordneten. Aus diesen Netzwerken ließen sich Hydrogele herstellen, welche in der Lage waren große Mengen an Wasser aufzunehmen. Diese Hydrogele wiederum stellen vielversprechende Kandidaten für biomedizinische Anwendungen dar. KW - polymer KW - chemistry KW - biomaterial KW - polymerization KW - kinetics KW - polypeptide KW - colloid KW - gelation KW - hydrogel KW - organogel KW - secondary structure KW - physical KW - NCA KW - N-carboxyanhydride KW - Polymer KW - Chemie KW - Biomaterial KW - Polymerisation KW - Kinetik KW - Polypeptid KW - Kolloid KW - Gelieren KW - Hydrogel KW - Organogel KW - Sekundärstruktur KW - physikalisch KW - NCA KW - N-carboxyanhydrid Y1 - 2016 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-396366 ER - TY - GEN A1 - Couto, Rafael C. A1 - Cruz, Vinicius V. A1 - Ertan, Emelie A1 - Eckert, Sebastian A1 - Fondell, Mattis A1 - Dantz, Marcus A1 - Kennedy, Brian A1 - Schmitt, Thorsten A1 - Pietzsch, Annette A1 - Guimarães, Freddy F. A1 - Ågren, Hans A1 - Gel’mukhanov, Faris A1 - Odelius, Michael A1 - Kimberg, Victor A1 - Föhlisch, Alexander T1 - Selective gating to vibrational modes through resonant X-ray scattering T2 - Postprints der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe N2 - The dynamics of fragmentation and vibration of molecular systems with a large number of coupled degrees of freedom are key aspects for understanding chemical reactivity and properties. Here we present a resonant inelastic X-ray scattering (RIXS) study to show how it is possible to break down such a complex multidimensional problem into elementary components. Local multimode nuclear wave packets created by X-ray excitation to different core-excited potential energy surfaces (PESs) will act as spatial gates to selectively probe the particular ground-state vibrational modes and, hence, the PES along these modes. We demonstrate this principle by combining ultra-high resolution RIXS measurements for gas-phase water with state-of-the-art simulations. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 1124 KW - potential-energy surface KW - raman-scattering KW - water-vapor KW - spectroscopy KW - chemistry KW - molecule KW - spectrum KW - CM(-1) KW - states KW - NM Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-436926 SN - 1866-8372 IS - 1124 ER - TY - GEN A1 - Hodgkins, Suzanne B. A1 - Richardson, Curtis J. A1 - Dommain, René A1 - Wang, Hongjun A1 - Glaser, Paul H. A1 - Verbeke, Brittany A1 - Winkler, B. Rose A1 - Cobb, Alexander R. A1 - Rich, Virginia I. A1 - Missilmani, Malak A1 - Flanagan, Neal A1 - Ho, Mengchi A1 - Hoyt, Alison M. A1 - Harvey, Charles F. A1 - Vining, S. Rose A1 - Hough, Moira A. A1 - Moore, Tim R. A1 - Richard, Pierre J. H. A1 - De La Cruz, Florentino B. A1 - Toufaily, Joumana A1 - Hamdan, Rasha A1 - Cooper, William T. A1 - Chanton, Jeffrey P. T1 - Tropical peatland carbon storage linked to global latitudinal trends in peat recalcitrance T2 - Postprints der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe N2 - Peatlands represent large terrestrial carbon banks. Given that most peat accumulates in boreal regions, where low temperatures and water saturation preserve organic matter, the existence of peat in (sub)tropical regions remains enigmatic. Here we examined peat and plant chemistry across a latitudinal transect from the Arctic to the tropics. Near-surface low-latitude peat has lower carbohydrate and greater aromatic content than near-surface high-latitude peat, creating a reduced oxidation state and resulting recalcitrance. This recalcitrance allows peat to persist in the (sub)tropics despite warm temperatures. Because we observed similar declines in carbohydrate content with depth in high-latitude peat, our data explain recent field-scale deep peat warming experiments in which catotelm (deeper) peat remained stable despite temperature increases up to 9 degrees C. We suggest that high-latitude deep peat reservoirs may be stabilized in the face of climate change by their ultimately lower carbohydrate and higher aromatic composition, similar to tropical peats. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 1125 KW - dissolved organic matter KW - greenhouse gas fluxes KW - permafrost thaw KW - Northern Minnesota KW - FTIR spectroscopy KW - lignin content KW - brown rot KW - decomposition KW - chemistry KW - dynamics Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-459658 SN - 1866-8372 IS - 1125 ER - TY - JOUR A1 - Mai-Linde, Yasemin A1 - Linker, Torsten T1 - Radical clock probes to determine carbohydrate radical stabilities JF - Organic letters N2 - Carbohydrate radical stabilities in the 1- and 2-position have been determined by a radical clock approach, starting from cyclopropanated sugars with xanthates as precursors. Various hexoses and pentoses afforded 1-deoxy sugars as main products, indicating that anomeric radicals are more stable than radicals in the 2-position. An additional influence of the configurations on radical stabilities has been observed. Our results should be interesting for the understanding of 1,2-radical rearrangements in carbohydrate chemistry and offer an easy access to deoxy-vinyl sugars. KW - stereoselective-synthesis KW - convenient synthesis KW - chemistry KW - cyclopropanation KW - mechanism KW - glycals KW - beta-(acyloxy)alkylrear KW - rangement KW - sugars Y1 - 2020 U6 - https://doi.org/10.1021/acs.orglett.0c00111 SN - 1523-7060 SN - 1523-7052 VL - 22 IS - 4 SP - 1525 EP - 1529 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Radosavljevic, Boris A1 - Lantuit, Hugues A1 - Knoblauch, Christian A1 - Couture, Nicole A1 - Herzschuh, Ulrike A1 - Fritz, Michael T1 - Arctic nearshore sediment dynamics - an example from Herschel Island - Qikiqtaruk, Canada JF - Journal of marine science and engineering N2 - Increasing arctic coastal erosion rates imply a greater release of sediments and organic matter into the coastal zone. With 213 sediment samples taken around Herschel Island-Qikiqtaruk, Canadian Beaufort Sea, we aimed to gain new insights on sediment dynamics and geochemical properties of a shallow arctic nearshore zone. Spatial characteristics of nearshore sediment texture (moderately to poorly sorted silt) are dictated by hydrodynamic processes, but ice-related processes also play a role. We determined organic matter (OM) distribution and inferred the origin and quality of organic carbon by C/N ratios and stable carbon isotopes delta C-13. The carbon content was higher offshore and in sheltered areas (mean: 1.0 wt.%., S.D.: 0.9) and the C/N ratios also showed a similar spatial pattern (mean: 11.1, S.D.: 3.1), while the delta C-13 (mean: -26.4 parts per thousand VPDB, S.D.: 0.4) distribution was more complex. We compared the geochemical parameters of our study with terrestrial and marine samples from other studies using a bootstrap approach. Sediments of the current study contained 6.5 times and 1.8 times less total organic carbon than undisturbed and disturbed terrestrial sediments, respectively. Therefore, degradation of OM and separation of carbon pools take place on land and continue in the nearshore zone, where OM is leached, mineralized, or transported beyond the study area. KW - permafrost KW - Arctic Ocean KW - stable carbon isotopes KW - nitrogen KW - sediment KW - chemistry KW - sediment dynamics KW - Beaufort Sea KW - grain size Y1 - 2022 U6 - https://doi.org/10.3390/jmse10111589 SN - 2077-1312 VL - 10 IS - 11 PB - MDPI CY - Basel ER - TY - THES A1 - Halbrügge, Lena T1 - Von der Curricularen Innovation zur Wissenschaftskommunikation T1 - From curriculum innovation to science communication BT - Explorative Entwicklung und Evaluation einer Wissenschaftskommunikationsstrategie für naturwissenschaftliche Forschungsverbünde BT - exploratory development and evaluation of a strategy for science communication in scientific research associations N2 - Im Rahmen einer explorativen Entwicklung wurde in der vorliegenden Studie ein Konzept zur Wissenschaftskommunikation für ein Graduiertenkolleg, in dem an photochemischen Prozessen geforscht wird, erstellt und anschließend evaluiert. Der Grund dafür ist die immer stärker wachsende Forderung nach Wissenschaftskommunikation seitens der Politik. Es wird darüber hinaus gefordert, dass die Kommunikation der eigenen Forschung in Zukunft integrativer Bestandteil des wissenschaftlichen Arbeitens wird. Um junge Wissenschaftler bereits frühzeitig auf diese Aufgabe vorzubereiten, wird Wissenschaftskommunikation auch in Forschungsverbünden realisiert. Aus diesem Grund wurde in einer Vorstudie untersucht, welche Anforderungen an ein Konzept zur Wissenschaftskommunikation im Rahmen eines Forschungsverbundes gestellt werden, indem die Einstellung der Doktoranden zur Wissenschaftskommunikation sowie ihre Kommunikationsfähigkeiten anhand eines geschlossenen Fragebogens evaluiert wurden. Darüber hinaus wurden aus den Daten Wissenschaftskommunikationstypen abgeleitet. Auf Grundlage der Ergebnisse wurden unterschiedliche Wissenschaftskommunikationsmaßnahmen entwickelt, die sich in der Konzeption, den Rezipienten, sowie der Form der Kommunikation und den Inhalten unterscheiden. Im Rahmen dieser Entwicklung wurde eine Lerneinheit mit Bezug auf die Inhalte des Graduiertenkollegs, bestehend aus einem Lehr-Lern-Experiment und den dazugehörigen Begleitmaterialien, konzipiert. Anschließend wurde die Lerneinheit in eine der Wissenschaftskommunikationsmaßnahmen integriert. Je nach Anforderung an die Doktoranden, wurden die Maßnahmen durch vorbereitende Workshops ergänzt. Durch einen halboffenen Pre-Post-Fragebogen wurde der Einfluss der Wissenschaftskommunikationsmaßnahmen und der dazugehörigen Workshops auf die Selbstwirksamkeit der Doktoranden evaluiert, um Rückschlüsse darauf zu ziehen, wie sich die Wahrnehmung der eigenen Kommunikationsfähigkeiten durch die Interventionen verändert. Die Ergebnisse deuten darauf hin, dass die einzelnen Wissenschaftskommunikationsmaßnahmen die verschiedenen Typen in unterschiedlicher Weise beeinflussen. Es ist anzunehmen, dass es abhängig von der eigenen Einschätzung der Kommunikationsfähigkeit unterschiedliche Bedürfnisse der Förderung gibt, die durch dedizierte Wissenschaftskommunikationsmaßnahmen berücksichtigt werden können. Auf dieser Grundlage werden erste Ansätze für eine allgemeingültige Strategie vorgeschlagen, die die individuellen Fähigkeiten zur Wissenschaftskommunikation in einem naturwissenschaftlichen Forschungsverbund fördert. N2 - As part of an exploratory research approach a concept for science communication was developed and evaluated for a research training group that focuses on photochemical processes. The increasing demand for science communication by politics justifies this approach. Furthermore, for future scientists the communication of their own research is demanded to be an integrative part of good scientific practice. To prepare young researchers for the upcoming task at an early stage, science communication is also required in research associations. Hence, a preliminary study was conducted to first investigate the requirements of a science communication concept by evaluating doctoral students’ attitudes towards science communication and their communication skills using a questionnaire comprising closed questions. Moreover, science communication types where derived from the data. Based on these results multiple science communication measures that differ in the conception, the recipients, the form of the communication and their content were developed. With reference to the content of the graduate program an experiment and the accompanying material for teaching was designed. It can be used in schools and extracurricular learning settings. Subsequently, the teaching unit was implemented into one measure. Depending on the requirements of each science communication measure for the doctoral students the measures were complemented by preparatory workshops. Through a semi-open pre-post questionnaire, the impact of the science communication measures and the associated workshops on the doctoral students’ self-efficacy was evaluated. Also, conclusions about how the perception of their own communication skills changed as a result of the intervention could be drawn. The results suggest that the individual science communication measures affect the different types in various ways. It is likely that depending on one’s assessment of communication skills, there are different funding needs that can be addressed through dedicated measures. In this way, a generally applicable strategy which promotes individual science communication skills in a scientific research association will be proposed. KW - Wissenschaftskommunikation KW - Curriculare Innovation KW - Chemie KW - Elektrolumineszenz KW - Lerneinheit KW - Elektrolumineszenz-Folie KW - Wissenschaftskommunikationstypen KW - chemistry KW - curriculum innovation KW - electroluminescence KW - electroluminescent foil KW - learning unit KW - science communication KW - science communication types Y1 - 2024 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-620357 ER -