TY  - JOUR
A1  - Ebrahimian-Motlagh, Saghar
A1  - Ribone, Pamela A.
A1  - Thirumalaikumar, Venkatesh P.
A1  - Allu, Annapurna Devi
A1  - Chan, Raquel L.
A1  - Mueller-Roeber, Bernd
A1  - Balazadeh, Salma
T1  - JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13
JF  - Frontiers in plant science
N2  - Low water availability is the major environmental factor limiting growth and productivity of plants and crops and is therefore considered of high importance for agriculture affected by climate change. Identifying regulatory components controlling the response and tolerance to drought stress is thus of major importance. The NAC transcription factor (TF) JUNGBRUNNEN1 (JUB1) from Arabidopsis thaliana extends leaf longevity under non-stress growth conditions, lowers cellular hydrogen peroxide (H2O2) level, and enhances tolerance against heat stress and salinity. Here, we additionally find that JUB1 strongly increases tolerance to drought stress in Arabidopsis when expressed from both, a constitutive (CaMV 35S) and an abiotic stress-induced (RD29A) promoter. Employing a yeast one-hybrid screen we identified HD-Zip class I TF AtHB13 as an upstream regulator of JUB1. AtHB13 has previously been reported to act as a positive regulator of drought tolerance. AtHB13 and JUB1 thereby establish a joint drought stress control module.
KW  - Arabidopsis
KW  - transcription factor
KW  - drought
KW  - JUB1
KW  - HB13
Y1  - 2017
U6  - https://doi.org/10.3389/fpls.2017.02118
SN  - 1664-462X
VL  - 8
PB  - Frontiers Research Foundation
CY  - Lausanne
ER  - 
TY  - GEN
A1  - Machens, Fabian
A1  - Balazadeh, Salma
A1  - Müller-Röber, Bernd
A1  - Messerschmidt, Katrin
T1  - Synthetic Promoters and Transcription Factors for Heterologous Protein Expression in Saccharomyces cerevisiae
N2  - Orthogonal systems for heterologous protein expression as well as for the engineering of synthetic gene regulatory circuits in hosts like Saccharomyces cerevisiae depend on synthetic transcription factors (synTFs) and corresponding cis-regulatory binding sites. We have constructed and characterized a set of synTFs based on either transcription activator-like effectors or CRISPR/Cas9, and corresponding small synthetic promoters (synPs) with minimal sequence identity to the host’s endogenous promoters. The resulting collection of functional synTF/synP pairs confers very low background expression under uninduced conditions, while expression output upon induction of the various synTFs covers a wide range and reaches induction factors of up to 400. The broad spectrum of expression strengths that is achieved will be useful for various experimental setups, e.g., the transcriptional balancing of expression levels within heterologous pathways or the construction of artificial regulatory networks. Furthermore, our analyses reveal simple rules that enable the tuning of synTF expression output, thereby allowing easy modification of a given synTF/synP pair. This will make it easier for researchers to construct tailored transcriptional control systems.
T3  - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 393 
KW  - JUB1
KW  - chimeric transcription factors
KW  - dead Cas9
KW  - gene expression
KW  - synthetic biology
KW  - synthetic circuits
KW  - transcriptional regulation
Y1  - 2017
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-403804
ER  - 
TY  - JOUR
A1  - Machens, Fabian
A1  - Balazadeh, Salma
A1  - Müller-Röber, Bernd
A1  - Messerschmidt, Katrin
T1  - Synthetic Promoters and Transcription Factors for Heterologous Protein Expression in Saccharomyces cerevisiae
JF  - Frontiers in Bioengineering and Biotechnology
N2  - Orthogonal systems for heterologous protein expression as well as for the engineering of synthetic gene regulatory circuits in hosts like Saccharomyces cerevisiae depend on synthetic transcription factors (synTFs) and corresponding cis-regulatory binding sites. We have constructed and characterized a set of synTFs based on either transcription activator-like effectors or CRISPR/Cas9, and corresponding small synthetic promoters (synPs) with minimal sequence identity to the host’s endogenous promoters. The resulting collection of functional synTF/synP pairs confers very low background expression under uninduced conditions, while expression output upon induction of the various synTFs covers a wide range and reaches induction factors of up to 400. The broad spectrum of expression strengths that is achieved will be useful for various experimental setups, e.g., the transcriptional balancing of expression levels within heterologous pathways or the construction of artificial regulatory networks. Furthermore, our analyses reveal simple rules that enable the tuning of synTF expression output, thereby allowing easy modification of a given synTF/synP pair. This will make it easier for researchers to construct tailored transcriptional control systems.
KW  - JUB1
KW  - synthetic biology
KW  - transcriptional regulation
KW  - gene expression
KW  - synthetic circuits
KW  - dead Cas9
KW  - chimeric transcription factors
Y1  - 2017
U6  - https://doi.org/10.3389/fbioe.2017.00063
SN  - 2296-4185
VL  - 5
SP  - 1
EP  - 11
PB  - Frontiers
CY  - Lausanne
ER  -