TY - JOUR A1 - Dreymann, Nico A1 - Wuensche, Julia A1 - Sabrowski, Wiebke A1 - Moeller, Anja A1 - Czepluch, Denise A1 - Vu Van, Dana A1 - Füssel, Susanne A1 - Menger, Marcus M. T1 - Inhibition of Human Urokinase-Type Plasminogen Activator (uPA) Enzyme Activity and Receptor Binding by DNA Aptamers as Potential Therapeutics through Binding to the Different Forms of uPA JF - International journal of molecular sciences N2 - Urokinase-type plasminogen activator is widely discussed as a marker for cancer prognosis and diagnosis and as a target for cancer therapies. Together with its receptor, uPA plays an important role in tumorigenesis, tumor progression and metastasis. In the present study, systematic evolution of ligands by exponential enrichment (SELEX) was used to select single-stranded DNA aptamers targeting different forms of human uPA. Selected aptamers allowed the distinction between HMW-uPA and LMW-uPA, and therefore, presumably, have different binding regions. Here, uPAapt-02-FR showed highly affine binding with a K-D of 0.7 nM for HMW-uPA and 21 nM for LMW-uPA and was also able to bind to pro-uPA with a K-D of 14 nM. Furthermore, no cross-reactivity to mouse uPA or tissue-type plasminogen activator (tPA) was measured, demonstrating high specificity. Suppression of the catalytic activity of uPA and inhibition of uPAR-binding could be demonstrated through binding with different aptamers and several of their truncated variants. Since RNA aptamers are already known to inhibit uPA-uPAR binding and other pathological functions of the uPA system, these aptamers represent a novel, promising tool not only for detection of uPA but also for interfering with the pathological functions of the uPA system by additionally inhibiting uPA activity. KW - biomarker KW - cancer KW - cancer therapy KW - DNA aptamer KW - microscale thermophoresis (MST) KW - SELEX KW - surface plasmon resonance spectroscopy (SPR) KW - uPA KW - uPAR KW - urokinase Y1 - 2022 U6 - https://doi.org/10.3390/ijms23094890 SN - 1661-6596 SN - 1422-0067 VL - 23 IS - 9 PB - MDPI CY - Basel ER - TY - THES A1 - van der Veen, Iris T1 - Defining moisture sources and (palaeo)environmental conditions using isotope geochemistry in the NW Himalaya N2 - Anthropogenic climate change alters the hydrological cycle. While certain areas experience more intense precipitation events, others will experience droughts and increased evaporation, affecting water storage in long-term reservoirs, groundwater, snow, and glaciers. High elevation environments are especially vulnerable to climate change, which will impact the water supply for people living downstream. The Himalaya has been identified as a particularly vulnerable system, with nearly one billion people depending on the runoff in this system as their main water resource. As such, a more refined understanding of spatial and temporal changes in the water cycle in high altitude systems is essential to assess variations in water budgets under different climate change scenarios. However, not only anthropogenic influences have an impact on the hydrological cycle, but changes to the hydrological cycle can occur over geological timescales, which are connected to the interplay between orogenic uplift and climate change. However, their temporal evolution and causes are often difficult to constrain. Using proxies that reflect hydrological changes with an increase in elevation, we can unravel the history of orogenic uplift in mountain ranges and its effect on the climate. In this thesis, stable isotope ratios (expressed as δ2H and δ18O values) of meteoric waters and organic material are combined as tracers of atmospheric and hydrologic processes with remote sensing products to better understand water sources in the Himalayas. In addition, the record of modern climatological conditions based on the compound specific stable isotopes of leaf waxes (δ2Hwax) and brGDGTs (branched Glycerol dialkyl glycerol tetraethers) in modern soils in four Himalayan river catchments was assessed as proxies of the paleoclimate and (paleo-) elevation. Ultimately, hydrological variations over geological timescales were examined using δ13C and δ18O values of soil carbonates and bulk organic matter originating from sedimentological sections from the pre-Siwalik and Siwalik groups to track the response of vegetation and monsoon intensity and seasonality on a timescale of 20 Myr. I find that Rayleigh distillation, with an ISM moisture source, mainly controls the isotopic composition of surface waters in the studied Himalayan catchments. An increase in d-excess in the spring, verified by remote sensing data products, shows the significant impact of runoff from snow-covered and glaciated areas on the surface water isotopic values in the timeseries. In addition, I show that biomarker records such as brGDGTs and δ2Hwax have the potential to record (paleo-) elevation by yielding a significant correlation with the temperature and surface water δ2H values, respectively, as well as with elevation. Comparing the elevation inferred from both brGDGT and δ2Hwax, large differences were found in arid sections of the elevation transects due to an additional effect of evapotranspiration on δ2Hwax. A combined study of these proxies can improve paleoelevation estimates and provide recommendations based on the results found in this study. Ultimately, I infer that the expansion of C4 vegetation between 20 and 1 Myr was not solely dependent on atmospheric pCO2, but also on regional changes in aridity and seasonality from to the stable isotopic signature of the two sedimentary sections in the Himalaya (east and west). This thesis shows that the stable isotope chemistry of surface waters can be applied as a tool to monitor the changing Himalayan water budget under projected increasing temperatures. Minimizing the uncertainties associated with the paleo-elevation reconstructions were assessed by the combination of organic proxies (δ2Hwax and brGDGTs) in Himalayan soil. Stable isotope ratios in bulk soil and soil carbonates showed the evolution of vegetation influenced by the monsoon during the late Miocene, proving that these proxies can be used to record monsoon intensity, seasonality, and the response of vegetation. In conclusion, the use of organic proxies and stable isotope chemistry in the Himalayas has proven to successfully record changes in climate with increasing elevation. The combination of δ2Hwax and brGDGTs as a new proxy provides a more refined understanding of (paleo-)elevation and the influence of climate. N2 - Die Auswirkungen des menschgemachten Klimawandels wirken sich auch auf den Wasserkreislauf aus. Während manche Regionen höhere Niederschlagsmengen zu erwarten haben, werden andere mit stärkeren und häufigeren Trockenperioden zu konfrontiert sein. Diese Veränderungen haben einen unmittelbaren Einfluss auf Evaporation, Langzeit-Wasserreservoire, Grundwasserbildung, Schneefall und Gletscher. Da Gebirge und Hochplateaus überdurchschnittlich von den Auswirkungen des Klimawandels betroffen sind, ist die Wasserversorgung der Menschen entlang der dort entspringenden Flüsse gefährdet. Insbesondere der Himalaya gilt als instabile Region, dessen Abflüsse die Wasserversorgung von annähernd einer Milliarde Menschen gewährleisten. Um zu erwartende Veränderungen des Wasserbudgets in Abhängigkeit von verschiedenen möglichen Klimawandelszenarien abschätzen zu können, ist ein detaillierteres Verständnis des Wasserkreislaufs in Hochgebirgen und -plateaus erforderlich. Neben dem globalen Klimawandel gibt es weitere Faktoren, die sich auf den Wasserkreislauf auswirken. Das Wechselspiel zwischen Gebirgsbildung und klimatischen Bedingungen beeinflusst den Wasserkreislauf auf geologischen Zeitskalen. Entsprechende Veränderungen und ihre Auswirkungen lassen sich jedoch nur eingeschränkt bestimmen. Mittels geeigneter Proxies für höhenbedingte Änderungen der Hydrologie lassen sich der Orogeneseverlauf sowie dessen klimatische Auswirkungen allerdings genauer rekonstruieren. In der vorliegenden Arbeit werden die Verhältnisse stabiler Isotope (als δ2H und δ18O ausgedrückt) von meteorischen Wassern sowie von organischem Material mit Methoden der Satellitenfernerkundung als Indikator für atmosphärische und hydrologische Prozesse kombiniert, um ein besseres Verständnis der verschiedenen Wasserquellen des Himalaya zu erlangen. Darüber hinaus wurde der Link zwischen modernen klimatischen Bedingungen und verbindungsspezifischen stabilen Isotopen von Blattwachsen (δ2Hwax) sowie von brGDGTs (branched Glycerol dialkyl glycerol tetraethers) rezenter Bodenproben aus den Einzugsgebieten vierer Flüsse des Himalaya hergestellt, um sie als Paläo-Klima- und Paläo-Höhenproxy verwenden zu können. Zu guter Letzt wurden hydrologische Veränderungen auf einer Zeitskala von 20 Mio. Jahren anhand von δ13C- and δ18O-Werten von Bodencarbonat und organischem Material aus Sedimentschnitten der pre-Siwalik und Siwalik-Einheiten nachvollzogen. Die Erkenntnisse dieser tragen zu einer deutlich genaueren Rekonstruktion von Vegetationsänderungen und der Entwicklung der Monsun-Intensität sowie -Saisonalität bei. Die Isotopenzusammensetzung der Oberflächenwasser der untersuchten Flüsse wird hauptsächlich durch Rayleigh-Destillation der im Wesentlichen vom Indischen Sommer Monsun eingetragenen Feuchtigkeit bestimmt. Der durch Satellitenfernerkundungsdaten bestätigte Anstieg des Deuterium-Exzesses (d-excess) im Frühjahr verdeutlicht den signifikanten Einfluss von Schnee- und Gletscherschmelze, der auch in Zeitreihen von Oberflächenwasserproben erkennbar ist. Sowohl brGDGT als auch δ2Hwax können potentiell die absolute Höhe zum Zeitpunkt ihrer Synthese abbilden, da sie stark mit der Lufttemperatur, bzw. mit Oberflächenwasser δ2H und somit indirekt auch mit der Höhe korreliert sind. Im direkten Vergleich der mittels brGDGT und δ2Hwax rekonstruierten Höhen ergaben sich insbesondere in ariden Teilen der Höhenprofile große Unterschiede. Diese sind hauptsächlich auf verstärkte Evapotranspiration und deren Auswirkung auf Pflanzenwasser und -wachse zurückzuführen. Basierend auf den Erkenntnissen der vorliegenden Arbeit können weitere vergleichende Untersuchungen beider Proxies genauere Paläo-Höhenstudien ermöglichen. Diese Arbeit zeigt, dass die Isotopie von Oberflächenwassern genutzt werden kann, um den sich ändernden Wasserhaushalt des Himalya im Kontext voraussichtlich weiter ansteigender Temperaturen zu beobachten. Unsicherheiten bei der Rekonstruktion von Paläo-Höhen konnten durch eine vergleichende Analyse zweier organischer Proxies (δ2Hwax and brGDGTs) aus Paläo-Bodenproben des Himalayas minimiert werden. Verhältnisse stabiler Isotope von Blattwachsen aus diesen Bodenproben spiegeln die Entwicklung der Vegetation unter dem Einfluss des Monsuns im späten Miozän wider. Zusammenfassend wurde erfolgreich gezeigt, dass organische Proxies und stabile Isotope höhenabhängige Änderungen des Klimas im Himalaya aufzeichnen können. Die Kombination von δ2Hwax and brGDGTs als neuer Proxy ermöglicht eine deutlich differenziertere Betrachtung von rekonstruierten Paläo-Höhen sowie Paläo-Klima. KW - stable isotope KW - Himalaya KW - n-alkanes KW - d-excess KW - biomarker KW - paleohydrology KW - GDGT KW - GDGT KW - Himalaya KW - Biomarker KW - Deuterium Exzesses KW - n-alkane KW - Paläohydrologie KW - stabilen Isotopen Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-514397 ER - TY - JOUR A1 - Liu, Qi A1 - Adler, Karsten A1 - Lipus, Daniel A1 - Kämpf, Horst A1 - Bussert, Robert A1 - Plessen, Birgit A1 - Schulz, Hans-Martin A1 - Krauze, Patryk A1 - Horn, Fabian A1 - Wagner, Dirk A1 - Mangelsdorf, Kai A1 - Alawi, Mashal T1 - Microbial signatures in deep CO2-saturated miocene sediments of the active Hartousov mofette system (NW Czech Republic) JF - Frontiers in microbiology N2 - The Hartousov mofette system is a natural CO2 degassing site in the central Cheb Basin (Eger Rift, Central Europe). In early 2016 a 108 m deep core was obtained from this system to investigate the impact of ascending mantle-derived CO2 on indigenous deep microbial communities and their surrounding life habitat. During drilling, a CO2 blow out occurred at a depth of 78.5 meter below surface (mbs) suggesting a CO2 reservoir associated with a deep low-permeable CO2-saturated saline aquifer at the transition from Early Miocene terrestrial to lacustrine sediments. Past microbial communities were investigated by hopanoids and glycerol dialkyl glycerol tetraethers (GDGTs) reflecting the environmental conditions during the time of deposition rather than showing a signal of the current deep biosphere. The composition and distribution of the deep microbial community potentially stimulated by the upward migration of CO2 starting during Mid Pleistocene time was investigated by intact polar lipids (IPLs), quantitative polymerase chain reaction (qPCR), and deoxyribonucleic acid (DNA) analysis. The deep biosphere is characterized by microorganisms that are linked to the distribution and migration of the ascending CO2-saturated groundwater and the availability of organic matter instead of being linked to single lithological units of the investigated rock profile. Our findings revealed high relative abundances of common soil and water bacteria, in particular the facultative, anaerobic and potential iron-oxidizing Acidovorax and other members of the family Comamonadaceae across the whole recovered core. The results also highlighted the frequent detection of the putative sulfate-oxidizing and CO2-fixating genus Sulfuricurvum at certain depths. A set of new IPLs are suggested to be indicative for microorganisms associated to CO2 accumulation in the mofette system. KW - geo-bio interaction KW - CO2 KW - mofette systems KW - Eger Rift KW - microbial lipid KW - biomarker KW - microbial diversity KW - deep biosphere KW - saline groundwater Y1 - 2020 U6 - https://doi.org/10.3389/fmicb.2020.543260 SN - 1664-302X VL - 11 PB - Frontiers Media CY - Lausanne ER - TY - THES A1 - Menges, Johanna T1 - Organic Carbon Storage, Transfer and Transformation in the Himalaya BT - insights from the Kali Gandaki Valley in Central Nepal N2 - The transfer of particulate organic carbon from continents to the ocean is an important component of the global carbon cycle. Transfer to and burial of photosynthetically fixed biospheric organic carbon in marine sediments can effectively sequester atmospheric carbon dioxide over geological timescales. The exhumation and erosion of fossil organic carbon contained in sedimentary rocks, i.e. petrogenic carbon, can result in remineralization, releasing carbon to the atmosphere. In contrast, eroded petrogenic organic carbon that gets transferred back to the ocean and reburied does not affect atmospheric carbon content. Mountain ranges play a key role in this transfer since they can source vast amounts of sediment including particulate organic carbon. Globally, the export of both, biospheric and petrogenic organic carbon has been linked to sediment export. Additionally, short transfer times from mountains to the ocean and high sediment concentrations have been shown to increase the likelihood of organic carbon burial. While the importance of mountain ranges in the organic carbon cycle is now widely recognized, the processes acting within mountain ranges to influence the storage, cycling and mobilization of organic carbon, as well as carbon fluxes from mountain ranges remain poorly constrained. In this thesis, I employ different methods to assess the nature and fate of particulate organic carbon in mountain belts, ranging from the molecular to regional landscape scale. These studies are located along the Trans-Himalayan Kali Gandaki River in Central Nepal. This river traverses all major geological and climatic zones of the Himalaya, from the dry northern Tibetan plateau to the high-relief, monsoon dominated steep High Himalaya and the lower relief and abundant vegetation of the Lesser Himalayan region. First, I document how biospheric organic matter has accumulated during the Holocene in the headwaters of the Kali Gandaki River valley, by combining compound specific isotope measurements with different dating methods and grain size data, and investigate the stability of this organic carbon reservoir on millennial timescales. I show, that around 1.6 ka an eco-geomorphic tipping point occurred leading to a destabilization of the landscape resulting in today’s high erosion rates and the excavation of the aged organic carbon reservoir. This study highlights the climatic and geomorphic controls on biospheric organic carbon storage and release from mountain ranges. Second, I systematically investigate the spatial variation of particulate organic carbon fluxes across the Himalaya along the Kali Gandaki River, using bulk stable and radioactive isotopes combined with a new Bayesian modeling approach. The detailed dataset allows the distinction of aged and modern biospheric organic carbon as well as petrogenic organic carbon across the Himalayan mountain range and the investigation of the role of climatic and geomorphic factors in their riverine export. The data suggest a decoupling of the particulate organic carbon from the sediment yield along the Kali Gandaki River, partially driven by climatic and geomorphic processes. In contrast to the suspended sediment, a large part of the particulate organic carbon exported by the river originates from the Tibetan part of the catchment and is dominated by petrogenic organic carbon derived from Jurassic shales with only minor contributions of modern and aged biospheric organic carbon. These findings emphasize the importance of organic carbon source distribution and erosion mechanisms in determining the organic carbon export from mountain ranges. In a third step, I explore the potential of ultra-high resolution mass spectrometry for particulate organic carbon transport studies. I have generated a novel and unprecedented high-resolution molecular dataset, which contains up to 103 molecular formulas of the lipid fraction of particulate organic matter for modern and aged biospheric carbon, petrogenic organic carbon and river sediments. First, I test if this dataset can be used to better resolve different organic carbon sources and to identify new geochemical tracers. Using multivariate statistics, I identify up to 10² characteristic molecular formulas for the major organic carbon sources in the upper part of the Kali Gandaki catchment, and trace their transfer from the surrounding landscape into the river sediment. Second, I test the potential of the molecular dataset to trace molecular transformations along source-to-sink pathways. I identify changes in molecular metrics derived from the dataset, which are characteristic of transformation processes during incorporation of litter into soil, the aging of soil material, and the mobilization of the organic carbon into the river. These two studies demonstrate that high-resolution molecular datasets open a promising analytical window on particulate organic carbon and can provide novel insights into the composition, sourcing and transformation of riverine particulate organic carbon. Collectively, these studies advance our understanding of the processes contributing to the storage and mobilization of organic carbon in the Central Himalaya, the mountain belt that dominates global erosional fluxes. They do so by identifying the major sources of particulate organic carbon to the Trans-Himalayan Kali Gandaki River, by elucidating their sensitivity to climate and geomorphic processes, and by identifying some of the transformations of this material on the molecular scale. As a result, the thesis demonstrates that the amount and composition of organic carbon routed from mountain belts is a function of the dynamic interactions of geologic, biologic, geomorphic and climatic processes within the mountain belt. This understanding will ultimately help in answering whether the build-up and erosion of mountain ranges over geological time represents a net carbon source or sink to the atmosphere. Beyond this, the thesis contributes to our technical ability to characterize organic matter and attribute it to sources by scoping the potential of high-end molecular analysis. KW - organic carbon cycle KW - biomarker KW - isotopes KW - Himalaya KW - rivers Y1 - 2020 ER - TY - JOUR A1 - Alker, Wiebke A1 - Schwerdtle, Tanja A1 - Schomburg, Lutz A1 - Haase, Hajo T1 - A Zinpyr-1-based Fluorimetric Microassay for Free Zinc in Human Serum JF - International journal of molecular sciences N2 - Zinc is an essential trace element, making it crucial to have a reliable biomarker for evaluating an individual’s zinc status. The total serum zinc concentration, which is presently the most commonly used biomarker, is not ideal for this purpose, but a superior alternative is still missing. The free zinc concentration, which describes the fraction of zinc that is only loosely bound and easily exchangeable, has been proposed for this purpose, as it reflects the highly bioavailable part of serum zinc. This report presents a fluorescence-based method for determining the free zinc concentration in human serum samples, using the fluorescent probe Zinpyr-1. The assay has been applied on 154 commercially obtained human serum samples. Measured free zinc concentrations ranged from 0.09 to 0.42 nM with a mean of 0.22 ± 0.05 nM. It did not correlate with age or the total serum concentrations of zinc, manganese, iron or selenium. A negative correlation between the concentration of free zinc and total copper has been seen for sera from females. In addition, the free zinc concentration in sera from females (0.21 ± 0.05 nM) was significantly lower than in males (0.23 ± 0.06 nM). The assay uses a sample volume of less than 10 µL, is rapid and cost-effective and allows us to address questions regarding factors influencing the free serum zinc concentration, its connection with the body’s zinc status, and its suitability as a future biomarker for an individual’s zinc status. KW - zinc KW - free zinc KW - serum KW - biomarker KW - fluorescent probe KW - Zinypr-1 Y1 - 2019 U6 - https://doi.org/10.3390/ijms20164006 SN - 1661-6596 SN - 1422-0067 VL - 20 IS - 16 PB - MDPI CY - Basel ER - TY - JOUR A1 - Aichner, Bernhard A1 - Makhmudov, Zafar A1 - Rajabov, Iljomjon A1 - Zhang, Qiong A1 - Pausata, Francesco Salvatore R. A1 - Werner, Martin A1 - Heinecke, Liv A1 - Kuessner, Marie L. A1 - Feakins, Sarah J. A1 - Sachse, Dirk A1 - Mischke, Steffen T1 - Hydroclimate in the Pamirs Was Driven by Changes in Precipitation-Evaporation Seasonality Since theLast Glacial Period JF - Geophysical research letters N2 - The Central Asian Pamir Mountains (Pamirs) are a high-altitude region sensitive to climatic change, with only few paleoclimatic records available. To examine the glacial-interglacial hydrological changes in the region, we analyzed the geochemical parameters of a 31-kyr record from Lake Karakul and performed a set of experiments with climate models to interpret the results. delta D values of terrestrial biomarkers showed insolation-driven trends reflecting major shifts of water vapor sources. For aquatic biomarkers, positive delta D shifts driven by changes in precipitation seasonality were observed at ca. 31-30, 28-26, and 17-14 kyr BP. Multiproxy paleoecological data and modelling results suggest that increased water availability, induced by decreased summer evaporation, triggered higher lake levels during those episodes, possibly synchronous to northern hemispheric rapid climate events. We conclude that seasonal changes in precipitation-evaporation balance significantly influenced the hydrological state of a large waterbody such as Lake Karakul, while annual precipitation amount and inflows remained fairly constant. KW - climate KW - biomarker KW - geochemistry KW - modelling KW - paleoclimate KW - hydrology Y1 - 2019 U6 - https://doi.org/10.1029/2019GL085202 SN - 0094-8276 SN - 1944-8007 VL - 46 IS - 23 SP - 13972 EP - 13983 PB - American Geophysical Union CY - Washington ER - TY - GEN A1 - Alker, Wiebke A1 - Schwerdtle, Tanja A1 - Schomburg, Lutz A1 - Haase, Hajo T1 - A Zinpyr-1-based fluorimetric microassay for free zinc in human serum T2 - Postprints der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe N2 - Zinc is an essential trace element, making it crucial to have a reliable biomarker for evaluating an individual’s zinc status. The total serum zinc concentration, which is presently the most commonly used biomarker, is not ideal for this purpose, but a superior alternative is still missing. The free zinc concentration, which describes the fraction of zinc that is only loosely bound and easily exchangeable, has been proposed for this purpose, as it reflects the highly bioavailable part of serum zinc. This report presents a fluorescence-based method for determining the free zinc concentration in human serum samples, using the fluorescent probe Zinpyr-1. The assay has been applied on 154 commercially obtained human serum samples. Measured free zinc concentrations ranged from 0.09 to 0.42 nM with a mean of 0.22 ± 0.05 nM. It did not correlate with age or the total serum concentrations of zinc, manganese, iron or selenium. A negative correlation between the concentration of free zinc and total copper has been seen for sera from females. In addition, the free zinc concentration in sera from females (0.21 ± 0.05 nM) was significantly lower than in males (0.23 ± 0.06 nM). The assay uses a sample volume of less than 10 µL, is rapid and cost-effective and allows us to address questions regarding factors influencing the free serum zinc concentration, its connection with the body’s zinc status, and its suitability as a future biomarker for an individual’s zinc status. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 1086 KW - zinc KW - free zinc KW - serum KW - biomarker KW - fluorescent probe KW - Zinypr-1 Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-472833 SN - 1866-8372 IS - 1086 ER - TY - THES A1 - Kochlik, Bastian Max T1 - Relevance of biomarkers for the diagnosis of the frailty syndrome T1 - Die Bedeutung von Biomarkern für die Diagnose des Frailty-Syndroms BT - focus on parameters of muscle protein turnover, micronutrients and oxidative stress BT - 3-Methylhistidine, Mikronährstoffe und oxidativer Stress im Fokus N2 - Frailty and sarcopenia share some underlying characteristics like loss of muscle mass, low muscle strength, and low physical performance. Imaging parameters and functional examinations mainly assess frailty and sarcopenia criteria; however, these measures can have limitations in clinical settings. Therefore, finding suitable biomarkers that reflect a catabolic muscle state e.g. an elevated muscle protein turnover as suggested in frailty, are becoming more relevant concerning frailty diagnosis and risk assessment. 3-Methylhistidine (3-MH) and its ratios 3-MH-to-creatinine (3-MH/Crea) and 3 MH-to-estimated glomerular filtration rate (3-MH/eGFR) are under discussion as possible biomarkers for muscle protein turnover and might support the diagnosis of frailty. However, there is some skepticism about the reliability of 3-MH measures since confounders such as meat and fish intake might influence 3-MH plasma concentrations. Therefore, the influence of dietary habits and an intervention with white meat on plasma 3-MH was determined in young and healthy individuals. In another study, the cross-sectional associations of plasma 3-MH, 3-MH/Crea and 3-MH/eGFR with the frailty status (robust, pre-frail and frail) were investigated. Oxidative stress (OS) is a possible contributor to frailty development, and high OS levels as well as low micronutrient levels are associated with the frailty syndrome. However, data on simultaneous measures of OS biomarkers together with micronutrients are lacking in studies including frail, pre-frail and robust individuals. Therefore, cross-sectional associations of protein carbonyls (PrCarb), 3-nitrotyrosine (3-NT) and several micronutrients with the frailty status were determined. A validated UPLC-MS/MS (ultra-performance liquid chromatography tandem mass spectrometry) method for the simultaneous quantification of 3-MH and 1-MH (1 methylhistidine, as marker for meat and fish consumption) was presented and used for further analyses. Omnivores showed higher plasma 3-MH and 1-MH concentrations than vegetarians and a white meat intervention resulted in an increase in plasma 3-MH, 3 MH/Crea, 1-MH and 1-MH/Crea in omnivores. Elevated 3-MH and 3-MH/Crea levels declined significantly within 24 hours after this white meat intervention. Thus, 3-MH and 3-MH/Crea might be used as biomarker for muscle protein turnover when subjects did not consume meat 24 hours prior to blood samplings. Plasma 3-MH, 3-MH/Crea and 3-MH/eGFR were higher in frail individuals than in robust individuals. Additionally, these biomarkers were positively associated with frailty in linear regression models, and higher odds to be frail were found for every increase in 3 MH and 3-MH/eGFR quintile in multivariable logistic regression models adjusted for several confounders. This was the first study using 3-MH/eGFR and it is concluded that plasma 3-MH, 3-MH/Crea and 3-MH/eGFR might be used to identify frail individuals or individuals at higher risk to be frail, and that there might be threshold concentrations or ratios to support these diagnoses. Higher vitamin D3, lutein/zeaxanthin, γ-tocopherol, α-carotene, β-carotene, lycopene and β-cryptoxanthin concentrations and additionally lower PrCarb concentrations were found in robust compared to frail individuals in multivariate linear models. Frail subjects had higher odds to be in the lowest than in the highest tertile for vitamin D3 α-tocopherol, α-carotene, β-carotene, lycopene, lutein/zeaxanthin, and β cryptoxanthin, and had higher odds to be in the highest than in the lowest tertile for PrCarb than robust individuals in multivariate logistic regression models. Thus, a low micronutrient together with a high PrCarb status is associated with pre-frailty and frailty. N2 - Gebrechlichkeit (englisch: frailty) und Sarkopenie teilen einige zugrundeliegende Merkmale wie einen Verlust von Muskelmasse, eine geringe Muskelkraft und eine geringe körperliche Leistungsfähigkeit, welche durch einen erhöhten Muskelproteinumsatz entstehen können. Kriterien der Gebrechlichkeit und Sarkopenie werden hauptsächlich durch bildgebende Verfahren sowie funktionelle Untersuchungen gemessen, die in ihrer Durchführbarkeit im klinischen Alltag jedoch eingeschränkt sein können. Daher gewinnt das Finden geeigneter Biomarker zur Anzeige eines erhöhten Muskelproteinumsatzes (kataboler Muskelzustand) in Bezug auf Diagnose und Risikobewertung der Gebrechlichkeit zunehmend an Bedeutung. 3-Methylhistidin (3-MH) und die Verhältnisse 3-MH zu Kreatinin (3-MH/Crea) und 3-MH zu geschätzter glomerulärer Filtrationsrate (3-MH/eGFR) werden als solche möglichen Biomarker diskutiert und könnten folglich die Diagnose und Risikobewertung von Gebrechlichkeit unterstützen. Es herrscht jedoch eine gewisse Skepsis hinsichtlich der Zuverlässigkeit von 3-MH-Messungen, da 3-MH-Plasmakonzentrationen durch Fleisch- und Fischaufnahme beeinflusst werden können. Daher wurde der Einfluss von Ernährungsgewohnheiten (Mischkost oder vegetarisch) und einer Intervention mit Hähnchenfleisch auf Plasma-3-MH bei jungen und gesunden Personen untersucht. In einer weiteren Studie wurden die Querschnittsassoziationen von 3-MH, 3-MH/Crea und 3-MH/eGFR im Plasma mit dem Frailty-Status (robust, pre-frail und frail) untersucht. Oxidativer Stress (OS) ist ein potentieller Faktor der zur Entwicklung von Gebrechlichkeit beiträgt, und sowohl hohe OS-Konzentrationen als auch niedrige Mikronährstoffkonzentrationen sind mit Gebrechlichkeit assoziiert. Daten zu simultanen Messungen von OS und Mikronährstoffen in Personen aller drei Frailty-Kategorien (robust, pre-frail und frail) fehlen jedoch. Aus diesem Grund wurden Querschnittsassoziationen von Proteincarbonylen (PrCarb), 3-Nitrotyrosin (3-NT) und mehrerer fettlöslicher Mikronährstoffe mit dem Frailty-Status bestimmt. Eine validierte UPLC-MS/MS-Methode (ultra-performance liquid chromatography tandem mass spectrometry) zur simultanen Bestimmung von 3-MH und 1-MH (1 Methylhistidin als Marker für den Fleisch- und Fischkonsum) in Plasma wurde beschrieben und für die weiteren Analysen verwendet. Mischköstler wiesen höhere 3 MH- und 1-MH-Konzentrationen in Plasma auf als Vegetarier. Die Intervention mit Hähnchenfleisch führte zu einem Anstieg von Plasma 3-MH, 3-MH/Crea, 1-MH und 1 MH/Crea bei Mischköstlern. Diese erhöhten 3-MH- und 3-MH/Crea-Spiegel sanken innerhalb von 24 Stunden nach der Intervention signifikant ab. Folglich stellen 3-MH und 3-MH/Crea potentielle Biomarker für den Muskelproteinumsatz dar, wenn Personen für 24 Stunden vor der Blutentnahme kein Fleisch verzehrt haben. Gebrechliche Teilnehmer wiesen höhere Plasma 3-MH-, 3-MH/Crea- und 3 MH/eGFR-Werte auf als robuste Teilnehmer und zusätzlich waren diese Biomarker in linearen Regressionsmodellen positiv mit Gebrechlichkeit assoziiert. In multivariablen logistischen Regressionsmodellen (adjustiert für mehrere Confounder) waren gebrechliche Personen im Vergleich zu robusten Personen mit einer höheren Wahrscheinlichkeit in einer höheren 3-MH- und 3-MH/eGFR-Quintile. Diese erste Studie, die 3-MH/eGFR als Biomarker für Gebrechlichkeit untersucht hat, erlaubt die Schlussfolgerung, dass Plasma-3-MH, -3-MH/Crea und -3-MH/eGFR verwendet werden könnte, um gebrechliche Personen oder Personen mit einem erhöhten Frailty-Risiko zu identifizieren. Möglicherweise gibt es auch Schwellenwerte, die diese Diagnosen unterstützen können. In multivariaten Regressionsanalysen wiesen robuste Personen höhere Vitamin D3-, Lutein/Zeaxanthin-, γ-Tocopherol-, α-Carotin-, β-Carotin-, Lycopin- und β Cryptoxanthin-Konzentrationen sowie niedrigere PrCarb-Konzentrationen auf als gebrechliche Personen. Zudem waren in multinomialen logistischen Regressionsanalysen gebrechliche Personen mit einer höheren Wahrscheinlichkeit sowohl in der niedrigsten Vitamin D3-, α-Tocopherol-, α-Carotin-, β-Carotin-, Lycopin-, Lutein/Zeaxanthin- und β Cryptoxanthin-Tertil als auch im höchsten PrCarb-Tertil zu finden als robuste Personen. Es wird daher geschlussfolgert, dass niedrige Mikronährstoffkonzentrationen zusammen mit hohen PrCarb-Konzentrationen mit Gebrechlichkeit und dessen Vorstufe (pre-frailty) assoziiert sind. KW - biomarker KW - Biomarker KW - frailty KW - Frailty KW - micronutrients KW - Mikronährstoffe KW - oxidative stress KW - oxidativer Stress KW - 3-methylhistidine KW - 3-Methylhistidin KW - muscle protein turnover KW - Muskelproteinumsatz Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-441186 ER - TY - JOUR A1 - Schulze, Sven A1 - Wehrhold, Michel A1 - Hille, Carsten T1 - Femtosecond-Pulsed laser written and etched fiber bragg gratings for fiber-optical biosensing JF - Sensors N2 - We present the development of a label-free, highly sensitive fiber-optical biosensor for online detection and quantification of biomolecules. Here, the advantages of etched fiber Bragg gratings (eFBG) were used, since they induce a narrowband Bragg wavelength peak in the reflection operation mode. The gratings were fabricated point-by-point via a nonlinear absorption process of a highly focused femtosecond-pulsed laser, without the need of prior coating removal or specific fiber doping. The sensitivity of the Bragg wavelength peak to the surrounding refractive index (SRI), as needed for biochemical sensing, was realized by fiber cladding removal using hydrofluoric acid etching. For evaluation of biosensing capabilities, eFBG fibers were biofunctionalized with a single-stranded DNA aptamer specific for binding the C-reactive protein (CRP). Thus, the CRP-sensitive eFBG fiber-optical biosensor showed a very low limit of detection of 0.82 pg/L, with a dynamic range of CRP detection from approximately 0.8 pg/L to 1.2 mu g/L. The biosensor showed a high specificity to CRP even in the presence of interfering substances. These results suggest that the proposed biosensor is capable for quantification of CRP from trace amounts of clinical samples. In addition, the adaption of this eFBG fiber-optical biosensor for detection of other relevant analytes can be easily realized. KW - fiber Bragg gratings KW - ultra-fast laser inscription KW - fiber etching KW - nanostructure fabrication KW - fiber-optical sensors KW - aptamers KW - C-reactive protein KW - biomarker Y1 - 2018 U6 - https://doi.org/10.3390/s18092844 SN - 1424-8220 VL - 18 IS - 9 PB - MDPI CY - Basel ER - TY - JOUR A1 - Stoessel, Daniel A1 - Schulte, Claudia A1 - dos Santos, Marcia C. Teixeira A1 - Scheller, Dieter A1 - Rebollo-Mesa, Irene A1 - Deuschle, Christian A1 - Walther, Dirk A1 - Schauer, Nicolas A1 - Berg, Daniela A1 - da Costa, Andre Nogueira A1 - Maetzler, Walter T1 - Promising Metabolite Profiles in the Plasma and CSF of Early Clinical JF - Frontiers in Aging Neuroscience N2 - Parkinson's disease (PD) shows high heterogeneity with regard to the underlying molecular pathogenesis involving multiple pathways and mechanisms. Diagnosis is still challenging and rests entirely on clinical features. Thus, there is an urgent need for robust diagnostic biofluid markers. Untargeted metabolomics allows establishing low-molecular compound biomarkers in a wide range of complex diseases by the measurement of various molecular classes in biofluids such as blood plasma, serum, and cerebrospinal fluid (CSF). Here, we applied untargeted high-resolution mass spectrometry to determine plasma and CSF metabolite profiles. We semiquantitatively determined small-molecule levels (<= 1.5 kDa) in the plasma and CSF from early PD patients (disease duration 0-4 years; n = 80 and 40, respectively), and sex-and age-matched controls (n = 76 and 38, respectively). We performed statistical analyses utilizing partial least square and random forest analysis with a 70/30 training and testing split approach, leading to the identification of 20 promising plasma and 14 CSF metabolites. The semetabolites differentiated the test set with an AUC of 0.8 (plasma) and 0.9 (CSF). Characteristics of the metabolites indicate perturbations in the glycerophospholipid, sphingolipid, and amino acid metabolism in PD, which underscores the high power of metabolomic approaches. Further studies will enable to develop a potential metabolite-based biomarker panel specific for PD KW - biomarker KW - untargeted metabolomics KW - neurodegeneration KW - plasma KW - CSF KW - machinelearning Y1 - 2018 U6 - https://doi.org/10.3389/fnagi.2018.00051 SN - 1663-4365 VL - 10 PB - Frontiers Research Foundation CY - Lausanne ER -