TY  - JOUR
A1  - Grebenkov, Denis S.
A1  - Metzler, Ralf
A1  - Oshanin, Gleb
T1  - A molecular relay race: sequential first-passage events to the terminal reaction centre in a cascade of diffusion controlled processes
JF  - New Journal of Physics (NJP)
N2  - We consider a sequential cascade of molecular first-reaction events towards a terminal reaction centre in which each reaction step is controlled by diffusive motion of the particles. The model studied here represents a typical reaction setting encountered in diverse molecular biology systems, in which, e.g. a signal transduction proceeds via a series of consecutive 'messengers': the first messenger has to find its respective immobile target site triggering a launch of the second messenger, the second messenger seeks its own target site and provokes a launch of the third messenger and so on, resembling a relay race in human competitions. For such a molecular relay race taking place in infinite one-, two- and three-dimensional systems, we find exact expressions for the probability density function of the time instant of the terminal reaction event, conditioned on preceding successful reaction events on an ordered array of target sites. The obtained expressions pertain to the most general conditions: number of intermediate stages and the corresponding diffusion coefficients, the sizes of the target sites, the distances between them, as well as their reactivities are arbitrary.
KW  - diffusion
KW  - reaction cascade
KW  - first passage time
Y1  - 2021
U6  - https://doi.org/10.1088/1367-2630/ac1e42
SN  - 1367-2630
VL  - 23
PB  - IOP - Institute of Physics Publishing
CY  - Bristol
ER  - 
TY  - GEN
A1  - Grebenkov, Denis S.
A1  - Metzler, Ralf
A1  - Oshanin, Gleb
T1  - A molecular relay race: sequential first-passage events to the terminal reaction centre in a cascade of diffusion controlled processes
T2  - Postprints der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe
N2  - We consider a sequential cascade of molecular first-reaction events towards a terminal reaction centre in which each reaction step is controlled by diffusive motion of the particles. The model studied here represents a typical reaction setting encountered in diverse molecular biology systems, in which, e.g. a signal transduction proceeds via a series of consecutive 'messengers': the first messenger has to find its respective immobile target site triggering a launch of the second messenger, the second messenger seeks its own target site and provokes a launch of the third messenger and so on, resembling a relay race in human competitions. For such a molecular relay race taking place in infinite one-, two- and three-dimensional systems, we find exact expressions for the probability density function of the time instant of the terminal reaction event, conditioned on preceding successful reaction events on an ordered array of target sites. The obtained expressions pertain to the most general conditions: number of intermediate stages and the corresponding diffusion coefficients, the sizes of the target sites, the distances between them, as well as their reactivities are arbitrary.
T3  - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 1159 
KW  - diffusion
KW  - reaction cascade
KW  - first passage time
Y1  - 2021
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-521942
SN  - 1866-8372
ER  -