TY - JOUR A1 - Zhang, Zhuodong A1 - Wieland, Ralf A1 - Reiche, Matthias A1 - Funk, Roger A1 - Hoffmann, Carsten A1 - Li, Yong A1 - Sommer, Michael T1 - Identifying sensitive areas to wind erosion in the xilingele grassland by computational fluid dynamics modelling JF - Ecological informatics : an international journal on ecoinformatics and computational ecolog N2 - In order to identify the areas in the Xilingele grassland which are sensitive to wind erosion, a computational fluid dynamics model (CFD-WEM) was used to simulate the wind fields over a region of 37 km(2) which contains different topography and land use types. Previous studies revealed the important influences of topography and land use on wind erosion in the Xilingele grassland. Topography influences wind fields at large scale, and land use influences wind fields near the ground. Two steps were designed to implement the CFD wind simulation, and they were respectively to simulate the influence of topography and surface roughness on the wind. Digital elevation model (DEM) and surface roughness length were the key inputs for the CFD simulation. The wind simulation by CFD-WEM was validated by a wind data set which was measured simultaneously at six positions in the field. Three scenarios with different wind velocities were designed based on observed dust storm events, and wind fields were simulated according to these scenarios to predict the sensitive areas to wind erosion. General assumptions that cropland is the most sensitive area to wind erosion and heavily and moderately grazed grasslands are both sensitive etc. can be refined by the modelling of CFD-WEM. Aided by the results of this study, the land use planning and protection measures against wind erosion can be more efficient. Based on the case study in the Xilingele grassland, a method of regional wind erosion assessment aided by CFD wind simulation is summarized. The essence of this method is a combination of CFD wind simulation and determination of threshold wind velocity for wind erosion. Because of the physically-based simulation and the flexibility of the method, it can be generalised to other regions. KW - Sensitive areas KW - Wind erosion KW - Computational fluid dynamics KW - Grassland KW - Surface roughness Y1 - 2012 U6 - https://doi.org/10.1016/j.ecoinf.2011.12.002 SN - 1574-9541 VL - 8 IS - 5 SP - 37 EP - 47 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Zhang, Zhuo-dong A1 - Wieland, Ralf A1 - Reiche, Matthias A1 - Funk, Roger A1 - Hoffmann, Carsten A1 - Li, Yong A1 - Sommer, Michael T1 - A computational fluid dynamics model for wind simulation: model implementation and experimental validation JF - Journal of Zhejiang University : an international journal ; Science A, Applied physics & engineering : an international applied physics & engineering journal N2 - To provide physically based wind modelling for wind erosion research at regional scale, a 3D computational fluid dynamics (CFD) wind model was developed. The model was programmed in C language based on the Navier-Stokes equations, and it is freely available as open source. Integrated with the spatial analysis and modelling tool (SAMT), the wind model has convenient input preparation and powerful output visualization. To validate the wind model, a series of experiments was conducted in a wind tunnel. A blocking inflow experiment was designed to test the performance of the model on simulation of basic fluid processes. A round obstacle experiment was designed to check if the model could simulate the influences of the obstacle on wind field. Results show that measured and simulated wind fields have high correlations, and the wind model can simulate both the basic processes of the wind and the influences of the obstacle on the wind field. These results show the high reliability of the wind model. A digital elevation model (DEM) of an area (3800 m long and 1700 m wide) in the Xilingele grassland in Inner Mongolia (autonomous region, China) was applied to the model, and a 3D wind field has been successfully generated. The clear implementation of the model and the adequate validation by wind tunnel experiments laid a solid foundation for the prediction and assessment of wind erosion at regional scale. KW - Wind model KW - Computational fluid dynamics (CFD) KW - Wind erosion KW - Wind tunnel experiments KW - Spatial analysis and modelling tool (SAMT) KW - Open source Y1 - 2012 U6 - https://doi.org/10.1631/jzus.A1100231 SN - 1673-565X VL - 13 IS - 4 SP - 274 EP - 283 PB - Zhejiang University Press CY - Hangzou ER - TY - JOUR A1 - Zhang, Gong A1 - Fedyunin, Ivan A1 - Kirchner, Sebastian A1 - Xiao, Chuanle A1 - Valleriani, Angelo A1 - Ignatova, Zoya T1 - FANSe: an accurate algorithm for quantitative mapping of large scale sequencing reads JF - Nucleic acids research N2 - The most crucial step in data processing from high-throughput sequencing applications is the accurate and sensitive alignment of the sequencing reads to reference genomes or transcriptomes. The accurate detection of insertions and deletions (indels) and errors introduced by the sequencing platform or by misreading of modified nucleotides is essential for the quantitative processing of the RNA-based sequencing (RNA-Seq) datasets and for the identification of genetic variations and modification patterns. We developed a new, fast and accurate algorithm for nucleic acid sequence analysis, FANSe, with adjustable mismatch allowance settings and ability to handle indels to accurately and quantitatively map millions of reads to small or large reference genomes. It is a seed-based algorithm which uses the whole read information for mapping and high sensitivity and low ambiguity are achieved by using short and non-overlapping reads. Furthermore, FANSe uses hotspot score to prioritize the processing of highly possible matches and implements modified Smith-Watermann refinement with reduced scoring matrix to accelerate the calculation without compromising its sensitivity. The FANSe algorithm stably processes datasets from various sequencing platforms, masked or unmasked and small or large genomes. It shows a remarkable coverage of low-abundance mRNAs which is important for quantitative processing of RNA-Seq datasets. Y1 - 2012 U6 - https://doi.org/10.1093/nar/gks196 SN - 0305-1048 VL - 40 IS - 11 PB - Oxford Univ. Press CY - Oxford ER - TY - JOUR A1 - Zhang, Chengjun A1 - Zhang, Wanyi A1 - Feng, Zhaodong A1 - Mischke, Steffen A1 - Gao, Xiang A1 - Gao, Dou A1 - Sun, Feifei T1 - Holocene hydrological and climatic change on the northern Mongolian Plateau based on multi-proxy records from Lake Gun Nuur JF - Palaeogeography, palaeoclimatology, palaeoecology : an international journal for the geo-sciences N2 - A multi-proxy study including analyses of delta C-13(org) for the lake sediment core GN-02 and grain size, TOC. CaCO3 content, delta C-13(carb) and delta O-18(carb) of bulk carbonate, and the mineralogy of the parallel core GN-04 from Gun Nuur was performed to reconstruct the Holocene hydrology and climate on the northern Mongolian Plateau. The chronology was established using 40 C-14 dates of bulk organic matter in addition to nine previously published radiocarbon dates for core GN-02, and further five C-14 dates for the new core GN-04. A lake reservoir effect of 1060 C-14 years was determined as the intercept of the high-resolution GN-02 age-depth model at the modern sediment surface. The size of the reservoir effect is supported by the age of the core-top sample (1200 +/- 40 C-14 years) and the determined difference between a wood-derived radiocarbon age from the GN-02 core base and the age-model inferred age for bulk organic matter at the same stratigraphic level (1000 C-14 years). Low lake level and prevailing aeolian sediment deposition at Gun Nuur under dry conditions were recorded during the earliest Holocene (> 10,800-10,300 cal a BP). Gun Nuur expanded under significantly wetter conditions between 10,300 and 7000 cal a BP. Unstable climate conditions existed in the mid Holocene (7000-2500 cal a BP) and three periods of low lake-levels and significantly drier conditions were recorded between 7000-5700, 4100-3600 and 3000-2500 cal a BP. Intermediate lake levels were inferred for the intervening periods. Around 2500 cal a BP, the climate change and wetter conditions were established again. As a consequence, the lake level of Gun Nuur rose again due to higher effective moisture and the relatively wet present conditions were achieved ca. 1600 cal a BP. Our results suggest that the initial Holocene climate change on the northern Mongolian Plateau was not accompanied by a rapid increase in precipitation as on the Tibetan Plateau. The establishment of wetter conditions in northern Mongolia lagged behind the early Holocene moisture increase on the Tibetan Plateau by ca. 1000 years. Subsiding dry air in the north of the Tibetan Plateau resulted from the strengthened summer monsoon on the Tibetan Plateau during the period of maximum summer insolation and probably inhibited a significant precipitation increase in Mongolia. The significant moisture increase in the Gun Nuur region at ca. 10.3 cal ka BP is probably not related to the northward shift of the present summer monsoon boundary or the moisture delivery from the northern Atlantic through the westerlies. Instead, water from melting snow, ice and frozen ground and the generation of precipitation from the local recycling of moisture are discussed as possible moisture source for the early onset of wetter conditions on the Mongolian Plateau. KW - Multi-proxy record KW - Sediment geochemistry KW - Mineralogy KW - Paleohydrology KW - Holocene KW - Mongolia Y1 - 2012 U6 - https://doi.org/10.1016/j.palaeo.2012.01.032 SN - 0031-0182 VL - 323 IS - 6 SP - 75 EP - 86 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Zerbian, Sabine T1 - Variation in the grammar of black south African English JF - Southern African linguistics and applied language studies Y1 - 2012 U6 - https://doi.org/10.2989/16073614.2012.693721 SN - 1607-3614 VL - 30 IS - 1 SP - 131 EP - 135 PB - NISC CY - Grahamstown ER - TY - JOUR A1 - Zenichowski, Karl A1 - Nacci, Ch A1 - Fölsch, S. A1 - Dokic, Jadranka A1 - Klamroth, Tillmann A1 - Saalfrank, Peter T1 - STM-switching of organic molecules on semiconductor surfaces: an above threshold density matrix model for 1,5 cyclooctadiene on Si(100) JF - Journal of physics : Condensed matter N2 - The scanning tunnelling microscope (STM)-induced switching of a single cyclooctadiene molecule between two stable conformations chemisorbed on a Si(100) surface is investigated using an above threshold model including a neutral ground state and an ionic excited state potential. Switching was recently achieved experimentally with an STM operated at cryogenic temperatures (Nacci et al 2008 Phys. Rev. B 77 121405(R)) and rationalized by a below threshold model using just a single potential energy surface (Nacci et al 2009 Nano Lett. 9 2997). In the present paper, we show that experimental key findings on the inelastic electron tunnelling (IET) switching can also be rationalized using an above threshold density matrix model, which includes, in addition to the neutral ground state potential, an anionic or cationic excited potential. We use one and two-dimensional potential energy surfaces. Furthermore, the influence of two key parameters of the density matrix description, namely the electronic lifetime of the ionic resonance and the vibrational lifetimes, on the ground state potential are discussed. Y1 - 2012 U6 - https://doi.org/10.1088/0953-8984/24/39/394009 SN - 0953-8984 VL - 24 IS - 39 PB - IOP Publ. Ltd. CY - Bristol ER - TY - JOUR A1 - Zenichowski, Karl A1 - Dokic, Jadranka A1 - Klamroth, Tillmann A1 - Saalfrank, Peter T1 - Current versus temperature-induced switching of a single molecule - open-system density matrix theory for 1,5-cyclooctadiene on Si(100) JF - The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr N2 - The switching of single cyclooctadiene molecules chemisorbed on a Si(100) surface between two stable conformations, can be achieved with a scanning tunneling microscope [Nacci , Phys. Rev. B 77, 121405(R) (2008)]. Recently, it was shown by quantum chemical and quantum dynamical simulations that major experimental facts can be explained by a single-mode model with switching enforced by inelastic electron tunneling (IET) excitations and perturbed by vibrational relaxation [Nacci , Nano Lett. 9, 2997 (2009)]. In the present paper, we extend the previous theoretical work in several respects: (1) The model is generalized to a two-mode description in which two C2H4 units of COD can move independently; (2) contributions of dipole and, in addition, (cation and anion) resonance-IET rates are considered; (3) the harmonic-linear vibrational relaxation model used previously is generalized to anharmonic vibrations. While the present models highlight generic aspects of IET-switching between two potential minima, they also rationalize specific experimental findings for COD/Si(100): (1) A single-electron excitation mechanism with a linear dependence of the switching rate on tunneling current I, (2) the capability to switch both at negative and positive sample biases, and (3) a crossover temperature around similar to 60 K from an IET-driven, T-independent atom tunneling regime, to classical over-the-barrier isomerization with exponential T-dependence at higher temperatures for a bias voltage of +1.5 V and an average tunneling current of 0.73 nA. Y1 - 2012 U6 - https://doi.org/10.1063/1.3692229 SN - 0021-9606 VL - 136 IS - 9 PB - American Institute of Physics CY - Melville ER - TY - THES A1 - Zenichowski, Karl T1 - Quantum dynamical study of Si(100) surface-mounted, STM-driven switches at the atomic and molecular scale T1 - Quantendynamische Untersuchung von Si(100) Oberflächen-gebundenen, STM-gesteuerten atomaren und molekularen Schaltern N2 - The aim of this thesis is the quantum dynamical study of two examples of scanning tunneling microscope (STM)-controllable, Si(100)(2x1) surface-mounted switches of atomic and molecular scale. The first example considers the switching of single H-atoms between two dangling-bond chemisorption sites on a Si-dimer of the Si(100) surface (Grey et al., 1996). The second system examines the conformational switching of single 1,5-cyclooctadiene molecules chemisorbed on the Si(100) surface (Nacci et al., 2008). The temporal dynamics are provided by the propagation of the density matrix in time via an according set of equations of motion (EQM). The latter are based on the open-system density matrix theory in Lindblad form. First order perturbation theory is used to evaluate those transition rates between vibrational levels of the system part. In order to account for interactions with the surface phonons, two different dissipative models are used, namely the bilinear, harmonic and the Ohmic bath model. IET-induced vibrational transitions in the system are due to the dipole- and the resonance-mechanism. A single surface approach is used to study the influence of dipole scattering and resonance scattering in the below-threshold regime. Further, a second electronic surface was included to study the resonance-induced switching in the above-threshold regime. Static properties of the adsorbate, e.g., potentials and dipole function and potentials, are obtained from quantum chemistry and used within the established quantum dynamical models. N2 - Die vorliegende Doktorarbeit befasst sich mit kleinsten schaltbaren Einheiten in Form des Moleküls Cyclooctadien (COD) und dem Wasserstoff-Atom, die chemisch fest mit einer Oberfläche aus kristallinem Silizium verbunden sind. Jeder dieser Schalter kann mittels einer winzigen Spitze, eines so genannten Rastertunnelmikroskops (RTM), von atomarem Durchmesser in zwei unterscheidbare und stabile Schaltpositionen gebracht werden. Dabei besteht das Schalten entweder in einer Änderung der Geometrie des molekularen Schalters oder im Brechen und Neu-knüpfen chemischer Bindungen. Dabei ist es entscheidend, dass durch die geringe Grösse dieser Schalter eine hohe Anzahl dieser Schalter auf einer Oberfläche deponiert werden können. Mit der in den Schaltern speicherbaren Informationen an oder aus, 0 oder 1 ließen sich sehr hohe Speicherkapazitäten erreichen. Vor einer Anwendung dieser Art ist es wichtig zunächst ein grundlegendes Verständnis der Schaltprozesse auf der Oberfläche zu gewinnen. Wenn alle wesentlichen Faktoren berücksichtigt wurden und der Mechanismus des Schaltens verstanden ist, kann das Ergebnis des Experiments mit Hilfe eines theoretischen Modells vorhergesagt werden. Für die Handhabbarkeit muss sich das theoretisches Modell auf wesentliche Einflüsse beschränken und diese so einfach wie möglich beschreiben. So wurde die simultane Bewegung der 12 Atome des COD in die Bewegung eines gemittelten Massenpunktes entlang von einer oder von zwei räumlichen Freiheitsgraden übersetzt. Dabei kann der Massenpunkt im klassischen Bild anschaulich als eine rollende Kugel beschrieben werden, die in einer Seite einer Doppelmulde gefangen ist. Die Kugel kann durch äußere Anregung zum Schwingen gebracht werden und schließlich über eine Barriere in die benachbarte Mulde schalten. Nun muss die Schwingung der Kugel gebremst werden, um ein Zurück-Schwingen der Kugel zu verhindern. Die Anregung erfolgt durch elektrische Ladungen die von der Spitze des RTM zur Oberfläche wandern oder durch eine schwingende, d.h. warme Oberfläche. Das Bremsen wird über die elastische Bindung zu einer kalten Oberfläche vermittelt. Um Quanteneffekte wie das Tunneln der Kugel durch die Barriere zu beschreiben wurde die Kugel durch ein Wellenpaket beschrieben und dessen Aufenthaltswahrscheinlichkeit in der Doppelmulde untersucht. Im Fall des Wasserstoffatoms war die experimentelle Prüfung des entworfenen Modells für ein Schalten bei starkem Strom leider nicht möglich. Für das COD Molekül konnte jedoch nicht nur die Übereinstimmung mit den experimentellen Befunden, sondern im Fall des Schaltens in Abhängigkeit der Oberflächentemperatur auch die Vorhersagefähigkeit des Modells unter Beweis gestellt werden. KW - Kerndynamik KW - molekulare Schalter KW - Nanotechnologie KW - STM KW - Oberflächen KW - Quantum dynamics KW - molecular switches KW - nanotechnology KW - STM KW - surfaces Y1 - 2012 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus-62156 ER - TY - THES A1 - Zeller, Carolin T1 - Self-regulation and labour standards : an exemplary study investigating the emergence and strenghening of self- regulation regimes in the apparel industry Y1 - 2012 SN - 978-3-631-62433-3 PB - Lang Peter GmbH Internationaler Verlag der Wissenschaften CY - Frankfurt ER - TY - THES A1 - Zarezadeh, Aliakbar T1 - Distributed smart cameras : architecture and communication protocols Y1 - 2012 CY - Potsdam ER -