TY - JOUR A1 - Awad, Duha Jawad A1 - Conrad, Franziska A1 - Koch, Andreas A1 - Schilde, Uwe A1 - Poeppl, Andreas A1 - Strauch, Peter T1 - 1,10-phenanthroline-dithiolate mixed ligand transition metal complexes : synthesis, characterization and EPR spectroscopy N2 - A series of new N2S2 mixed ligand transition metal complexes, where N-2 is phenanthroline and S-2 is 1,2- dithiooxalate (dto) or 1,2-dithiosquarate (dtsq), has been synthesized and characterized. IR spectra reveal that the 1,2- dithiolate ligands are coordinated via the sulfur atoms forming a N2S2 coordination sphere. The copper(II) complex [Cu(phen)(dto)] was studied by EPR spectroscopy as a diamagnetically diluted powder. The diamagnetic dilution resulted from doping of the copper complex into the isostructural host lattice of the nickel complex [Ni(phen)(dto)]. The electronic situation in the frontier orbitals of the copper complex calculated from the experimental data is compared to the results of EHT and DFT calculations. Furthermore, one side product, chlorobis(1,10-phenanthroline)copper(I) ethanol solvate hydrate [(phen)(2)CuCl]center dot C2H5OH center dot H2O, was formed by a reduction process and characterized by X-ray diffraction. In the crystal packing one-dimensional columns of dimers are formed, stabilized by significant pi-pi interactions. Y1 - 2010 UR - http://www.sciencedirect.com/science/journal/00201693 U6 - https://doi.org/10.1016/j.ica.2010.01.021 SN - 0020-1693 ER - TY - JOUR A1 - Awad, Duha Jawad A1 - Koch, Andreas A1 - Mickler, Wulfhard A1 - Schilde, Uwe A1 - Strauch, Peter T1 - EPR spectroscopy of 4, 4 '-Bis(tert-butyl)-2, 2 '-bipyridine-1, 2-dithiolatocuprates(II) in host lattices with different coordination geometries JF - Zeitschrift für anorganische und allgemeine Chemie N2 - A series of new heteroleptic MN2S2 transition metal complexes with M = Cu2+ for EPR measurements and as diamagnetic hosts Ni2+, Zn2+, and Pd2+ were synthesized and characterized. The ligands are N2 = 4, 4'-bis(tert-butyl)-2, 2'-bipyridine (tBu2bpy) and S2 =1, 2-dithiooxalate, (dto), 1, 2-dithiosquarate, (dtsq), maleonitrile-1, 2-dithiolate, or 1, 2-dicyanoethene-1, 2-dithiolate, (mnt). The CuII complexes were studied by EPR in solution and as powders, diamagnetically diluted in the isostructural planar [NiII(tBu2bpy)(S2)] or[PdII(tBu2bpy)(S2)] as well as in tetrahedrally coordinated[ZnII(tBu2bpy)(S2)] host structures to put steric stress on the coordination geometry of the central CuN2S2 unit. The spin density contributions for different geometries calculated from experimental parameters are compared with the electronic situation in the frontier orbital, namely in the semi-occupied molecular orbital (SOMO) of the copper complex, derived from quantum chemical calculations on different levels (EHT and DFT). One of the hosts, [NiII(tBu2bpy)(mnt)], is characterized by X-ray structure analysis to prove the coordination geometry. The complex crystallizes in a square-planar coordination mode in the monoclinic space group P21/a with Z = 4 and the unit cell parameters a = 10.4508(10) angstrom, b = 18.266(2) angstrom, c = 12.6566(12) angstrom, beta = 112.095(7)degrees. Oxidation and reductions potentials of one of the host complexes, [Ni(tBu2bpy)(mnt)], were obtained by cyclovoltammetric measurements. KW - 1 KW - 2-Dithiosquarate KW - 1 KW - 2-Dithiooxalate KW - 1 KW - 2-Dicyanoethene-1 KW - 2-dithiolate KW - 4 KW - 4'-Bis(tert-butyl)-2 KW - 2'-bipyridine KW - X-ray structure KW - EPR KW - Copper KW - Nickel KW - Zinc Y1 - 2012 U6 - https://doi.org/10.1002/zaac.201100517 SN - 0044-2313 VL - 638 IS - 6 SP - 965 EP - 975 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Balci, K. A1 - Akkaya, Y. A1 - Akyuz, S. A1 - Collier, W. B. A1 - Stricker, M. C. A1 - Stover, D. D. A1 - Ritzhaupt, G. A1 - Koch, Andreas A1 - Kleinpeter, Erich T1 - The effects of conformation and zwitterionic tautomerism on the structural and vibrational spectral data of anserine JF - Vibrational spectroscopy : an international journal devoted to applications of infrared and raman spectroscopy N2 - In this study, the stable conformers of neutral anserine were searched by molecular dynamics simulations and energy minimization calculations using the MM2 force field. Thermochemical calculations at B3LYP/6-31G(d) level of theory followed these preliminary calculations. The results confirmed that neutral anserine has quite a flexible structure and many stable gauche and trans conformers at room temperature. Nevertheless, two are considerably more favourable in energy than the others and expected to dominate the gas-phase and matrix IR spectra of the molecule. The corresponding structural and vibrational spectral data for these two conformers of neutral anserine, whose relative stabilities were also examined by high-accuracy energy calculations carried out using G3MP2B3 method, and for the most stable conformer of anserine in zwitterion form were calculated at B3LYP/6-311++G(d,p) level of theory. The calculated harmonic force constants were refined using the Scaled Quantum Mechanical Force Field (SQM-FF) method and then used to produce the refined wavenumbers, potential energy distributions (PEDs) and IR and Raman intensities. These refined data together with the scaled harmonic wavenumbers obtained using another method, Dual Scale factors (DS), enabled us to correctly analyse the observed IR and Raman spectra of anserine and revealed the effects of conformation and zwitterionic tautomerism on its structural and vibrational spectral data. (C) 2016 Elsevier B.V. All rights reserved. KW - Anserine KW - Matrix IR spectrum KW - Tautomerism KW - SQM-FF KW - Dual scale factors Y1 - 2016 U6 - https://doi.org/10.1016/j.vibspec.2016.08.003 SN - 0924-2031 SN - 1873-3697 VL - 86 SP - 277 EP - 289 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Balci, Kubilay A1 - Koch, Andreas A1 - Kleinpeter, Erich T1 - A theoretical IR spectroscopic study based on DFT calculations for free mn-15S(2)O(3) maleonitrile-dithiacrown ether compound N2 - The theoretically possible stable conformers of free mn-15S2O3 maleonitrile-dithiacrown ether molecule were searched by means of a conformational study which consists of molecular dynamics and energy minimization calculations performed with MM2 force field and successive geometry optimization + frequency calculations performed first at B3LYP/3- 21G and then at B3LYP/6-31G(d) levels of theory. The obtained calculation results have clearly indicated that the free molecule in electronic ground state is very flexible and accordingly has many possible stable conformers of different conformational properties at room temperature; among them, the one having a macrocyclic ring structure in which all of the ether units oriented toward the center of the ring was determined the energetically most preferable conformer. In addition, the equilibrium geometrical parameters, vibrational normal modes and associated IR spectral data of the determined most stable three conformers of the molecule were calculated at B3LYP/6-31+G(d) and B3LYP/6-31++G(d,p) levels of theory. A successful assignment of the fundamental bands observed in the recorded experimental solid phase and solution phase IR spectra of the molecule was achieved in the light of the theoretical data obtained from these DFT calculations. To fit the calculated harmonic wavenumbers to the experimental ones, two different scaling procedures, referred to as "Scaled Quantum Mechanical Force Field (SQM FF) methodology" and "Scaling wavenumbers with empirical dual scale factors", were proceeded independently. Y1 - 2009 UR - http://www.sciencedirect.com/science/journal/00222860 U6 - https://doi.org/10.1016/j.molstruc.2008.08.027 SN - 0022-2860 ER - TY - JOUR A1 - Balci, Kubilay A1 - Koch, Andreas A1 - Kleinpeter, Erich T1 - A comparative vibrational spectroscopic investigation of free mn-12S(2)O(2) and fn-12S(2)O(2) dithiacrown ethers based on DFT calculations N2 - A successful assignment for the fundamental bands observed in the experimental IR spectra of mn-12S(2)O(2) and fn-12S(2)O(2) dithiacrown ethers was achieved by the aid of the density functional theory (DFT) based quantum mechanical calculations carried out at the 133LYP/6-31G(d) and B3LYP/6-31 + G(d) level of theory. Two different scaling approaches, '(i) scaled quantum mechanics force field (SQM FF) methodology', and (ii) the 'scaling frequencies with dual empirical scale factors', were used in order to fit the calculated harmonic frequencies to the experimental ones. Potential energy distribution (PED) calculations were carried out to define the internal coordinate contributions to each normal mode and to define the corresponding normal modes of the molecules. The effects of the conformational differences onto the IR active normal modes of the two isomeric molecules and their corresponding experimental frequencies were discussed in the light of the calculated spectral data. Y1 - 2006 UR - http://www.sciencedirect.com/science/journal/00222860 U6 - https://doi.org/10.1016/j.molstruc.2005.10.048 SN - 0022-2860 ER - TY - JOUR A1 - Balci, Kubilay A1 - Yapar, G. A1 - Akkaya, Y. A1 - Akyuz, S. A1 - Koch, Andreas A1 - Kleinpeter, Erich T1 - A conformational analysis and vibrational spectroscopic investigation on 1,2-bis(o-carboxyphenoxy) ethane molecule JF - Vibrational spectroscopy : an international journal devoted to applications of infrared and raman spectroscopy N2 - The minima on the potential energy surface of 1,2-bis(o-carboxyphenoxy)ethane (CPE) molecule in its electronic ground state were searched by a molecular dynamics simulation performed with MM2 force field. For each of the found minimum-energy conformers, the corresponding equilibrium geometry, charge distribution, HOMO-LUMO energy gap, force field, vibrational normal modes and associated IR and Raman spectral data were determined by means of the density functional theory (DFT) based electronic structure calculations carried out by using B3LYP method and various Pople-style basis sets. The obtained theoretical data confirmed the significant effects of the intra- and inter-molecular hydrogen bonding interactions on the conformational structure, force field, and group vibrations of the molecule. The same data have also revealed that two of the determined stable conformers, both of which exhibit pseudo-crown structure, are considerably more favorable in energy to the others and accordingly provide the major contribution to the experimental spectra of CPE. In the light of the improved vibrational spectral data obtained within the "SQM FF" methodology and "Dual Scale Factors" approach for the monomer and dimer forms of these two conformers, a reliable assignment of the fundamental bands observed in the experimental room-temperature IR and Raman spectra of the molecule was given, and the sensitivities of its group vibrations to conformation, substitution and dimerization were discussed. KW - Glycol podands KW - Salicylic acid KW - IR and Raman spectra KW - SQM FF KW - Dual Scale Factors Y1 - 2012 U6 - https://doi.org/10.1016/j.vibspec.2011.11.011 SN - 0924-2031 VL - 58 IS - 1-2 SP - 27 EP - 43 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Baranac-Stojanovic, Marija A1 - Koch, Andreas A1 - Kleinpeter, Erich T1 - Density Functional Calculations of the Anisotropic Effects of Borazine and 1,3,2,4-Diazadiboretidine JF - ChemPhysChem : a European journal of chemical physics and physical chemistry N2 - On the basis of the nucleus-independent chemical shift (NICS) concept, the anisotropic effects of two inorganic rings, namely, borazine and planar 1,3,2,4-diazadiboretidine, are quantitatively calculated and visualized as isochemical shielding surfaces (ICSSs). Dissection of magnetic shielding values along the three Cartesian axes into contributions from s and p bonds by the natural chemical shieldingnatural bond orbital (NCSNBO) method revealed that their appearance is not a simple reflection of the extent of (anti)aromaticity. KW - anisotropic effects KW - aromaticity KW - B,N heterocycles KW - density functional calculations KW - NMR spectroscopy Y1 - 2012 U6 - https://doi.org/10.1002/cphc.201200732 SN - 1439-4235 VL - 13 IS - 17 SP - 3803 EP - 3811 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Baranac-Stojanovic, Marija A1 - Koch, Andreas A1 - Kleinpeter, Erich T1 - Is the conventional interpretation of the anisotropic effects of C=C double bonds and aromatic rings in NMR spectra in terms of the p-electron shielding/deshielding contributions correct? JF - Chemistry - a European journal N2 - Based on the nucleus-independent chemical shift (NICS) concept, isotropic magnetic shielding values have been computed along the three Cartesian axes for ethene, cyclobutadiene, benzene, naphthalene, and benzocyclobutadiene, starting from the molecular/ring center up to 10 angstrom away. These through-space NMR spectroscopic shielding (TSNMRS) values, which reflect the anisotropic effects, have been broken down into contributions from localized- and canonical molecular orbitals (LMOs and CMOs); these contributions revealed that the proton NMR spectroscopic chemical shifts of nuclei that are spatially close to the C?C double bond or the aromatic ring should not be explained in terms of the conventionally accepted p-electron shielding/deshielding effects. In fact, these effects followed the predictions only for the antiaromatic cyclobutadiene ring. KW - ab initio calculations KW - anisotropic effects KW - NMR spectroscopy KW - nucleus-independent chemical shift KW - pi interactions Y1 - 2012 U6 - https://doi.org/10.1002/chem.201101882 SN - 0947-6539 VL - 18 IS - 1 SP - 370 EP - 376 PB - Wiley-Blackwell CY - Malden ER - TY - JOUR A1 - Barta, Petra A1 - Szatmari, Istvan A1 - Fueloep, Ferenc A1 - Heydenreich, Matthias A1 - Koch, Andreas A1 - Kleinpeter, Erich T1 - Synthesis and stereochemistry of new naphth[1,3]oxazino[3,2-a] benzazepine and naphth[1,3]oxazino[3,2-e]thienopyridine derivatives JF - Tetrahedron N2 - Through the reactions of 1- or 2-naphthol and 4,5-dihydro-3H-benz[c]azepine or 6,7-dihydrothieno[3,2-c]pyridine, new aminonaphthol derivatives were prepared. The syntheses were extended by using N-containing naphthol analogues such as 5-hydroxyisoquinoline and 6-hydroxyquinoline. The ring closures of the novel bifunctional compounds were also achieved, resulting in new naphth[2,1-e][1,3]oxazines, naphth[1,2-e][1,3]oxazines, isoquinolino[5,6-e][1,3]oxazines and quinolino[5,6-e][1,3]oxazines. H-1 NMR spectra of the target heterocycles 16, 20 and 21 were sufficiently resolved to indentify the present stereochemistry; therefore, beside computed structures, spatial experimental (dipolar coupling-NOE) and computed (ring current effect of the naphthyl moiety-TSNMRS) NMR studies were employed. The studied heterocycles exist exclusively as S(14b),R(N), R(14b),S(N), and S(16b)S(N) isomers, respectively. The flexible moieties of the studied compounds prefer. (C) 2016 Elsevier Ltd. All rights reserved. KW - Modified Mannich reaction KW - Thienopyridine KW - Benzazepine KW - NMR spectroscopy KW - Stereochemistry KW - Theoretical calculations Y1 - 2016 U6 - https://doi.org/10.1016/j.tet.2016.03.058 SN - 0040-4020 VL - 72 SP - 2402 EP - 2410 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Belasri, Khadija A1 - Topal, Leila A1 - Heydenreich, Matthias A1 - Koch, Andreas A1 - Kleinpeter, Erich A1 - Fulop, Ferenc A1 - Szatmari, Istvan T1 - Synthesis and conformational analysis of naphthoxazine-fused phenanthrene derivatives JF - Molecules N2 - The synthesis of new phenanthr[9,10-e][1,3]oxazines was achieved by the direct coupling of 9-phenanthrol with cyclic imines in the modified aza-Friedel-Crafts reaction followed by the ring closure of the resulting bifunctional aminophenanthrols with formaldehyde. Aminophenanthrol-type Mannich bases were synthesised and transformed to phenanthr[9,10-e][1,3]oxazines via [4 + 2] cycloaddition. Detailed NMR structural analyses of the new polyheterocycles as well as conformational studies including Density Functional Theory (DFT) modelling were performed. The relative stability of ortho-quinone methides (o-QMs) was calculated, the geometries obtained were compared with the experimentally determined NMR structures, and thereby, the regioselectivity of the reactions has been assigned. KW - modified Mannich reaction KW - cyclic imines KW - [4+2] cycloaddition KW - NMR KW - spectroscopy KW - conformational analysis KW - DFT calculations Y1 - 2020 U6 - https://doi.org/10.3390/molecules25112524 SN - 1420-3049 VL - 25 IS - 11 PB - MDPI CY - Basel ER -