TY - JOUR A1 - Erler, Alexander A1 - Riebe, Daniel A1 - Beitz, Toralf A1 - Löhmannsröben, Hans-Gerd A1 - Grothusheitkamp, Daniela A1 - Kunz, T. A1 - Methner, Frank-Jürgen T1 - Detection of volatile organic compounds in the headspace above mold fungi by GC-soft X-radiation-based APCI-MS JF - Journal of mass spectrometr N2 - Mold fungi on malting barley grains cause major economic loss in malting and brewery facilities. Possible proxies for their detection are volatile and semivolatile metabolites. Among those substances, characteristic marker compounds have to be identified for a confident detection of mold fungi in varying surroundings. The analytical determination is usually performed through passive sampling with solid phase microextraction, gas chromatographic separation, and detection by electron ionization mass spectrometry (EI-MS), which often does not allow a confident determination due to the absence of molecular ions. An alternative is GC-APCI-MS, generally, allowing the determination of protonated molecular ions. Commercial atmospheric pressure chemical ionization (APCI) sources are based on corona discharges, which are often unspecific due to the occurrence of several side reactions and produce complex product ion spectra. To overcome this issue, an APCI source based on soft X-radiation is used here. This source facilitates a more specific ionization by proton transfer reactions only. In the first part, the APCI source is characterized with representative volatile fungus metabolites. Depending on the proton affinity of the metabolites, the limits of detection are up to 2 orders of magnitude below those of EI-MS. In the second part, the volatile metabolites of the mold fungus species Aspergillus, Alternaria, Fusarium, and Penicillium are investigated. In total, 86 compounds were found with GC-EI/APCI-MS. The metabolites identified belong to the substance classes of alcohols, aldehydes, ketones, carboxylic acids, esters, substituted aromatic compounds, terpenes, and sesquiterpenes. In addition to substances unspecific for the individual fungus species, characteristic patterns of metabolites, allowing their confident discrimination, were found for each of the 4 fungus species. Sixty-seven of the 86 metabolites are detected by X-ray-based APCI-MS alone. The discrimination of the fungus species based on these metabolites alone was possible. Therefore, APCI-MS in combination with collision induced dissociation alone could be used as a supervision method for the detection of mold fungi. KW - APCI KW - gas chromatography KW - mass spectrometry KW - mold fungi KW - soft X-radiation KW - volatile organic compounds Y1 - 2018 U6 - https://doi.org/10.1002/jms.4210 SN - 1076-5174 SN - 1096-9888 VL - 53 IS - 10 SP - 911 EP - 920 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Kopyra, Janina A1 - Wierzbicka, Paulina A1 - Tulwin, Adrian A1 - Thiam, Guillaume A1 - Bald, Ilko A1 - Rabilloud, Franck A1 - Abdoul-Carime, Hassan T1 - Experimental and theoretical studies of dissociative electron attachment to metabolites oxaloacetic and citric acids JF - International Journal of Molecular Sciences (IJMS) N2 - In this contribution the dissociative electron attachment to metabolites found in aerobic organisms, namely oxaloacetic and citric acids, was studied both experimentally by means of a crossed-beam setup and theoretically through density functional theory calculations. Prominent negative ion resonances from both compounds are observed peaking below 0.5 eV resulting in intense formation of fragment anions associated with a decomposition of the carboxyl groups. In addition, resonances at higher energies (3–9 eV) are observed exclusively from the decomposition of the oxaloacetic acid. These fragments are generated with considerably smaller intensities. The striking findings of our calculations indicate the different mechanism by which the near 0 eV electron is trapped by the precursor molecule to form the transitory negative ion prior to dissociation. For the oxaloacetic acid, the transitory anion arises from the capture of the electron directly into some valence states, while, for the citric acid, dipole- or multipole-bound states mediate the transition into the valence states. What is also of high importance is that both compounds while undergoing DEA reactions generate highly reactive neutral species that can lead to severe cell damage in a biological environment. KW - dissociative electron attachment KW - negative ions KW - oxaloacetic acid KW - citric acid KW - mass spectrometry Y1 - 2021 U6 - https://doi.org/10.3390/ijms22147676 SN - 1422-0067 VL - 22 IS - 14 PB - MDPI CY - Basel ER - TY - JOUR A1 - Obreht, Igor A1 - Wörmer, Lars A1 - Brauer, Achim A1 - Wendt, Jenny A1 - Alfken, Susanne A1 - De Vleeschouwer, David A1 - Elvert, Marcus A1 - Hinrichs, Kai-Uwe T1 - An annually resolved record of Western European vegetation response to Younger Dryas cooling JF - Quaternary science reviews : the international multidisciplinary research and review journal N2 - The regional patterns and timing of the Younger Dryas cooling in the North Atlantic realm were complex and are mechanistically incompletely understood. To enhance understanding of regional climate patterns, we present molecular biomarker records at subannual to annual resolution by mass spectrometry imaging (MSI) of sediments from the Lake Meerfelder Maar covering the Allerod-Younger Dryas transition. These analyses are supported by conventional extraction-based molecular-isotopic analyses, which both validate the imaging results and constrain the sources of the target compounds. The targeted fatty acid biomarkers serve as a gauge of the response of the local aquatic and terrestrial ecosystem to climate change. Based on the comparison of our data with existing data from Meerfelder Maar, we analyse the short-term environmental evolution in Western Europe during the studied time interval and confirm the previously reported delayed hydrological response to Greenland cooling. However, despite a detected delay of Western European environmental change of similar to 135 years, our biomarker data show statistically significant correlation with deuterium excess in Greenland ice core at - annual resolution during this time-transgressive cooling. This suggests a coherent atmospheric forcing across the North Atlantic realm during this transition. We propose that Western European cooling was postponed due to major reorganization of the westerlies that were intermittently forcing warmer and wetter air masses from lower latitudes to Western Europe and thus resulted in delayed cooling relative to Greenland. KW - lateglacial KW - paleoclimatology KW - Western Europe KW - Meerfelder Maar KW - high-resolution biomarkers KW - fatty acids KW - FT-ICR-MS KW - mass spectrometry KW - imaging Y1 - 2020 U6 - https://doi.org/10.1016/j.quascirev.2020.106198 SN - 0277-3791 VL - 231 PB - Elsevier CY - Amsterdam [u.a.] ER - TY - JOUR A1 - Riebe, Daniel A1 - Eder, Alexander A1 - Ritschel, Thomas A1 - Beitz, Toralf A1 - Löhmannsröben, Hans-Gerd A1 - Beil, Andreas A1 - Blaschke, Michael A1 - Ludwig, Thomas T1 - Atmospheric pressure chemical ionization of explosives induced by soft X-radiation in ion mobility spectrometry: mass spectrometric investigation of the ionization reactions of drift gasses, dopants and alkyl nitrates JF - Journal of mass spectrometr N2 - A promising replacement for the radioactive sources commonly encountered in ion mobility spectrometers is a miniaturized, energy-efficient photoionization source that produce the reactant ions via soft X-radiation (2.8 keV). In order to successfully apply the photoionization source, it is imperative to know the spectrum of reactant ions and the subsequent ionization reactions leading to the detection of analytes. To that end, an ionization chamber based on the photoionization source that reproduces the ionization processes in the ion mobility spectrometer and facilitates efficient transfer of the product ions into a mass spectrometer was developed. Photoionization of pure gasses and gas mixtures containing air, N-2, CO2 and N2O and the dopant CH2Cl2 is discussed. The main product ions of photoionization are identified and compared with the spectrum of reactant ions formed by radioactive and corona discharge sources on the basis of literature data. The results suggest that photoionization by soft X-radiation in the negative mode is more selective than the other sources. In air, adduct ions of O-2 - with H2O and CO2 were exclusively detected. Traces of CO2 impact the formation of adduct ions of O-2 - and Cl -(upon addition of dopant) and are capable of suppressing them almost completely at high CO2 concentrations. Additionally, the ionization products of four alkyl nitrates (ethylene glycol dinitrate, nitroglycerin, erythritol tetranitrate and pentaerythritol tetranitrate) formed by atmospheric pressure chemical ionization induced by X-ray photoionization in different gasses (air, N-2 and N2O) and dopants (CH2Cl2, C2H5Br and CH3I) are investigated. The experimental studies are complemented by density functional theory calculations of the most important adduct ions of the alkyl nitrates (M) used for their spectrometric identification. In addition to the adduct ions [M + NO3](-) and [M + Cl](-), adduct ions such as [M + N2O2](-), [M + Br](-) and [M+ I](-) were detected, and their gas-phase structures and energetics are investigated by density functional theory calculations. Copyright (C) 2016 John Wiley & Sons, Ltd. KW - ion mobility spectrometry KW - mass spectrometry KW - explosives KW - X-ray KW - photoionization KW - alkyl nitrates Y1 - 2016 U6 - https://doi.org/10.1002/jms.3784 SN - 1076-5174 SN - 1096-9888 VL - 51 SP - 566 EP - 577 PB - Wiley-Blackwell CY - Hoboken ER - TY - JOUR A1 - Robinson, Matthew Scott A1 - Niebuhr, Mario A1 - Lever, Fabiano A1 - Mayer, Dennis A1 - Metje, Jan A1 - Gühr, Markus T1 - Ultrafast photo-ion probing of the ring-opening process in trans-stilbene oxide JF - Chemistry - a European journal N2 - The ultrafast photo-induced ring opening of the oxirane derivative trans-stilbene oxide has been studied through the use of ultrafast UV/UV pump-probe spectroscopy by using photo-ion detection. Single- and multiphoton probe paths and final states were identified through comparisons between UV power studies and synchrotron-based vacuum ultraviolet (VUV) single-photon ionization studies. Three major time-dependent features of the parent ion (sub-450 fs decay, (1.5 +/- 0.2) ps, and >100 ps) were observed. These decays are discussed in conjunction with the primary ring-opening mechanism of stilbene oxide, which occurs through C-C dissociation in the oxirane ring. The appearance of fragments relating to the masses of dehydrogenated diphenylmethane (167 amu) and dehydrogenated methylbenzene (90 amu) were also investigated. The appearance of the 167 amu fragment could suggest an alternative ultrafast ring-opening pathway via the dissociation of one of the C-O bonds within the oxirane ring. KW - femtochemistry KW - mass spectrometry KW - photochemistry KW - small ring systems KW - stilbene oxide Y1 - 2021 U6 - https://doi.org/10.1002/chem.202101343 SN - 1521-3765 VL - 27 IS - 44 SP - 11418 EP - 11427 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Sagu Tchewonpi, Sorel A1 - Zimmermann, Lynn A1 - Landgräber, Eva A1 - Homann, Thomas A1 - Huschek, Gerd A1 - Özpinar, Haydar A1 - Schweigert, Florian J. A1 - Rawel, Harshadrai Manilal T1 - Comprehensive Characterization and Relative Quantification of α-Amylase/Trypsin Inhibitors from Wheat Cultivars by Targeted HPLC-MS/MS JF - Foods N2 - The α-amylase/trypsin inhibitors (ATIs) are discussed as being responsible for non-celiac wheat sensitivity (NCWS), besides being known as allergenic components for baker’s asthma. Different approaches for characterization and quantification including proteomics-based methods for wheat ATIs have been documented. In these studies generally the major ATIs have been addressed. The challenge of current study was then to develop a more comprehensive workflow encompassing all reviewed wheat-ATI entries in UniProt database. To substantially test proof of concept, 46 German and Turkish wheat samples were used. Two extractions systems based on chloroform/methanol mixture (CM) and under buffered denaturing conditions were evaluated. Three aspects were optimized, tryptic digestion, chromatographic separation, and targeted tandem mass spectrometric analysis (HPLC-MS/MS). Preliminary characterization with sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) documented the purity of the extracted ATIs with CM mixture and the amylase (60–80%)/trypsin (10–20%) inhibition demonstrated the bifunctional activity of ATIs. Thirteen (individual/common) biomarkers were established. Major ATIs (7–34%) were differently represented in samples. Finally, to our knowledge, the proposed HPLC-MS/MS method allowed for the first time so far the analysis of all 14 reviewed wheat ATI entries reported. KW - α-amylase/trypsin inhibitors KW - wheat cultivars KW - SDS-PAGE KW - peptides markers KW - relative quantification KW - mass spectrometry KW - LC-MRM-MS Y1 - 2020 U6 - https://doi.org/10.3390/foods9101448 SN - 2304-8158 VL - 9 IS - 10 PB - MDPI CY - Basel ER - TY - JOUR A1 - Wigger, Dominik A1 - Gulbins, Erich A1 - Kleuser, Burkhard A1 - Schumacher, Fabian T1 - Monitoring the Sphingolipid de novo Synthesis by Stable-Isotope Labeling and Liquid Chromatography-Mass Spectrometry JF - Frontiers in Cell and Developmental Biology N2 - Sphingolipids are a class of lipids that share a sphingoid base backbone. They exert various effects in eukaryotes, ranging from structural roles in plasma membranes to cellular signaling. De novo sphingolipid synthesis takes place in the endoplasmic reticulum (ER), where the condensation of the activated C₁₆ fatty acid palmitoyl-CoA and the amino acid L-serine is catalyzed by serine palmitoyltransferase (SPT). The product, 3-ketosphinganine, is then converted into more complex sphingolipids by additional ER-bound enzymes, resulting in the formation of ceramides. Since sphingolipid homeostasis is crucial to numerous cellular functions, improved assessment of sphingolipid metabolism will be key to better understanding several human diseases. To date, no assay exists capable of monitoring de novo synthesis sphingolipid in its entirety. Here, we have established a cell-free assay utilizing rat liver microsomes containing all the enzymes necessary for bottom-up synthesis of ceramides. Following lipid extraction, we were able to track the different intermediates of the sphingolipid metabolism pathway, namely 3-ketosphinganine, sphinganine, dihydroceramide, and ceramide. This was achieved by chromatographic separation of sphingolipid metabolites followed by detection of their accurate mass and characteristic fragmentations through high-resolution mass spectrometry and tandem-mass spectrometry. We were able to distinguish, unequivocally, between de novo synthesized sphingolipids and intrinsic species, inevitably present in the microsome preparations, through the addition of stable isotope-labeled palmitate-d₃ and L-serine-d₃. To the best of our knowledge, this is the first demonstration of a method monitoring the entirety of ER-associated sphingolipid biosynthesis. Proof-of-concept data was provided by modulating the levels of supplied cofactors (e.g., NADPH) or the addition of specific enzyme inhibitors (e.g., fumonisin B₁). The presented microsomal assay may serve as a useful tool for monitoring alterations in sphingolipid de novo synthesis in cells or tissues. Additionally, our methodology may be used for metabolism studies of atypical substrates – naturally occurring or chemically tailored – as well as novel inhibitors of enzymes involved in sphingolipid de novo synthesis. KW - sphingolipid de novo synthesis KW - serine palmitoyltransferase KW - mass spectrometry KW - stable-isotope labeling KW - ceramides Y1 - 2019 U6 - https://doi.org/10.3389/fcell.2019.00210 SN - 2296-634X VL - 7 PB - Frontiers Media CY - Lausanne ER -