TY - JOUR A1 - Friedrich, Thomas A1 - Oberkofler, Vicky A1 - Trindade, Inês A1 - Altmann, Simone A1 - Brzezinka, Krzysztof A1 - Lämke, Jörn S. A1 - Gorka, Michal A1 - Kappel, Christian A1 - Sokolowska, Ewelina A1 - Skirycz, Aleksandra A1 - Graf, Alexander A1 - Bäurle, Isabel T1 - Heteromeric HSFA2/HSFA3 complexes drive transcriptional memory after heat stress in Arabidopsis JF - Nature Communications N2 - Adaptive plasticity in stress responses is a key element of plant survival strategies. For instance, moderate heat stress (HS) primes a plant to acquire thermotolerance, which allows subsequent survival of more severe HS conditions. Acquired thermotolerance is actively maintained over several days (HS memory) and involves the sustained induction of memory-related genes. Here we show that FORGETTER3/ HEAT SHOCK TRANSCRIPTION FACTOR A3 (FGT3/HSFA3) is specifically required for physiological HS memory and maintaining high memory-gene expression during the days following a HS exposure. HSFA3 mediates HS memory by direct transcriptional activation of memory-related genes after return to normal growth temperatures. HSFA3 binds HSFA2, and in vivo both proteins form heteromeric complexes with additional HSFs. Our results indicate that only complexes containing both HSFA2 and HSFA3 efficiently promote transcriptional memory by positively influencing histone H3 lysine 4 (H3K4) hyper-methylation. In summary, our work defines the major HSF complex controlling transcriptional memory and elucidates the in vivo dynamics of HSF complexes during somatic stress memory. Moderate heat stress primes plants to acquire tolerance to subsequent, more severe heat stress. Here the authors show that the HSFA3 transcription factor forms a heteromeric complex with HSFA2 to sustain activated transcription of genes required for acquired thermotolerance by promoting H3K4 hyper-methylation. Y1 - 2021 U6 - https://doi.org/10.1038/s41467-021-23786-6 SN - 2041-1723 VL - 12 IS - 1 PB - Nature Publishing Group UK CY - [London] ER - TY - JOUR A1 - Bläsius, Thomas A1 - Friedrich, Tobias A1 - Lischeid, Julius A1 - Meeks, Kitty A1 - Schirneck, Friedrich Martin T1 - Efficiently enumerating hitting sets of hypergraphs arising in data profiling JF - Journal of computer and system sciences : JCSS N2 - The transversal hypergraph problem asks to enumerate the minimal hitting sets of a hypergraph. If the solutions have bounded size, Eiter and Gottlob [SICOMP'95] gave an algorithm running in output-polynomial time, but whose space requirement also scales with the output. We improve this to polynomial delay and space. Central to our approach is the extension problem, deciding for a set X of vertices whether it is contained in any minimal hitting set. We show that this is one of the first natural problems to be W[3]-complete. We give an algorithm for the extension problem running in time O(m(vertical bar X vertical bar+1) n) and prove a SETH-lower bound showing that this is close to optimal. We apply our enumeration method to the discovery problem of minimal unique column combinations from data profiling. Our empirical evaluation suggests that the algorithm outperforms its worst-case guarantees on hypergraphs stemming from real-world databases. KW - Data profiling KW - Enumeration algorithm KW - Minimal hitting set KW - Transversal hypergraph KW - Unique column combination KW - W[3]-Completeness Y1 - 2022 U6 - https://doi.org/10.1016/j.jcss.2021.10.002 SN - 0022-0000 SN - 1090-2724 VL - 124 SP - 192 EP - 213 PB - Elsevier CY - San Diego ER - TY - JOUR A1 - Ribacki, Enrico A1 - Trumbull, Robert B. A1 - Lopez De Luchi, Monica Graciela A1 - Altenberger, Uwe T1 - The chemical and B-Isotope composition of Tourmaline from intra-granitic Pegmatites in the Las Chacras-Potrerillos Batholith, Argentina JF - The Canadian mineralogist : journal of the Mineralogical Association of Canada N2 - The Devonian Las Chacras-Potrerillos batholith comprises six nested monzonitic to granitic intrusions with metaluminous to weakly peraluminous composition and a Sr-Nd isotopic signature indicating a dominantly juvenile mantle-derived source. The chemically most evolved units in the southern batholith contain a large number of intra-granitic, pod-shaped tourmaline-bearing pegmatites. This study uses in situ chemical and boron isotopic analyses of tourmaline from nine of these pegmatites to discuss their relationship to the respective host intrusions and the implications of their B-isotope composition for the source and evolution of the magmas. The tourmalines reveal a diversity in element composition (e.g., FeO, MgO, TiO2, CaO, MnO, F) which distinguishes individual pegmatites from one another. However, all have a narrow 5 11 B range of -13.7 to -10.5%0 (n = 100) which indicates a relatively uniform magmatic system and similar temperature conditions during tourmaline crystallization. The average delta(11) B value of -11.7%0 is typical for S-type granites and is within the range reported for peraluminous granites. pegmatites, and metamorphic units of the Ordovician basement into which the Las Chacras-Potrerillos batholith intruded. The B-isotope evidence argues for a crustal boron source like that of the Ordovician basement, in contrast to the metaluminous to weakly peraluminous composition and juvenile initial Sr and Nd isotope ratios of the Las Chacras-Potrerillos batholith magmas. We propose that the boron was not derived from the magma source region but was incorporated from dehydration melting of elastic metasedimentary rocks higher up in the crustal column. KW - pegmatite KW - tourmaline KW - SIMS KW - B-isotopes KW - Las Chacras-Potrerillos KW - Sierra de San Luis KW - Argentina Y1 - 2022 U6 - https://doi.org/10.3749/canmin.2100036 SN - 0008-4476 SN - 1499-1276 VL - 60 IS - 1 SP - 49 EP - 66 PB - Association of Canada CY - Ottawa ER - TY - JOUR A1 - Santamans, Carla Daniela A1 - Cordoba, Francisco E. A1 - Franco, María G. A1 - Vignoni, Paula A1 - Lupo, Liliana C. T1 - Hydro-climatological variability in Lagunas de Vilama System, Argentinean Altiplano-Puna Plateau, Southern Tropical Andes (22 degrees S) and its response to large-scale climate forcings JF - The science of the total environment : an international journal for scientific research into the environment and its relationship with man N2 - The Altiplano-Puna Plateau holds several shallow lakes, which are very sensitive to climate changes. This work is focused on a high-altitude lake system called Lagunas de Vilama (LVS), located in a complex climatic transition area with scarcity of continuous and homogeneous instrumental records. The objective of this study is to determine the regional spatial-temporal variability of precipitation and evaluate the seasonal and interannual lake responses. We use a lake-surfaces record derived from Landsat images to investigate links with regional precipitations and different climatic forcings. The results reveal that austral summer and autumn precipitations control the variability of the annual lake-surfaces. Also, we found intra-annual and interannual lags in the lake responses to precipitations, and identified several wet and dry stages. Our results show negative trends in precipitations and lake-surfaces, whose were strengthened by a shift to a warm phase of the Atlantic Multidecadal Oscillation in the 1990s. The El Nino Southern Oscillation, Pacific Decadal Oscillation, and Southern Annular Mode also exert a strong influence in the region. This study demonstrates that the variability of LVS lakes is strongly related to the South American Monsoon System dynamics and large-scale climate fordngs from the Pacific and Atlantic Oceans. This work provides novel indices which demonstrated to be good indicators of regional hydroclimatological variability for this region of South America. KW - Lake-surfaces variability KW - Precipitation variability KW - Hydro-meteorological indices KW - Regional forcings KW - South American Monsoon KW - System KW - Andean plateau Y1 - 2021 U6 - https://doi.org/10.1016/j.scitotenv.2020.144926 SN - 0048-9697 SN - 1879-1026 VL - 767 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Eshghi, Nasim A1 - Mach, Thomas A1 - Reichel, Lothar T1 - New matrix function approximations and quadrature rules based on the Arnoldi process JF - Journal of computational and applied mathematics N2 - The Arnoldi process can be applied to inexpensively approximate matrix functions of the form f (A)v and matrix functionals of the form v*(f (A))*g(A)v, where A is a large square non-Hermitian matrix, v is a vector, and the superscript * denotes transposition and complex conjugation. Here f and g are analytic functions that are defined in suitable regions in the complex plane. This paper reviews available approximation methods and describes new ones that provide higher accuracy for essentially the same computational effort by exploiting available, but generally not used, moment information. Numerical experiments show that in some cases the modifications of the Arnoldi decompositions proposed can improve the accuracy of v*(f (A))*g(A)v about as much as performing an additional step of the Arnoldi process. KW - Arnoldi process KW - Matrix function approximation KW - Quadrature rule Y1 - 2021 U6 - https://doi.org/10.1016/j.cam.2021.113442 SN - 0377-0427 SN - 1879-1778 VL - 391 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Carpio Arias, Tannia Valeria A1 - Arias Mogrovejo, Diana Carolina A1 - Nicolalde Cifuentes, Tomás Marcelo A1 - Tapia Veloz, Estephany Carolina A1 - Zeeuw, Chris I. de A1 - Vinueza Veloz, Maria Fernanda T1 - Sleep quality does not mediate the negative effects of chronodisruption on body composition and metabolic syndrome in healthcare workers in Ecuador JF - Diabetes & metabolic syndrome : clinical research & reviews ; the official journal of DiabetesIndia N2 - Background and aims: The objective of the present work was to determine to what extent sleep quality may mediate the association between chronodisruption (CD) and metabolic syndrome (MS), and between CD and body composition (BC). Methodology: Cross-sectional study which included 300 adult health workers, 150 of whom were night shift workers and thereby exposed to CD. Diagnosis of MS was made based on Adult Treatment Panel III criteria. Sleep quality was measured using the Pittsburgh Sleep Quality Index. Body mass index (BMI), fat mass percentage, and visceral fat percentage were measured as indicators of body composition (BC). Data were analyzed using logistic, linear regression and structural equation models. Results: The odds of health workers exposed to CD to suffer MS was 22.13 (IC95 8.68-66.07) when the model was adjusted for age, gender, physical activity and energy consumption. CD was also significantly associated with an increase in fat mass and visceral fat percentages, but not to BMI. Surprisingly, there was not enough evidence supporting the hypothesis that sleep quality contributes to the association between CD and MS or between CD and BC. Conclusions: Sleep quality does not mediate the negative effects of CD on MS nor on BC. KW - Shift work KW - Metabolic syndrome KW - Sleep quality KW - Chronodisruption KW - Body composition Y1 - 2021 U6 - https://doi.org/10.1016/j.dsx.2021.01.017 SN - 1871-4021 SN - 1878-0334 VL - 15 IS - 1 SP - 397 EP - 402 PB - Elsevier CY - Amsterdam [u.a.] ER - TY - JOUR A1 - Klose, Ann Kristin A1 - Wunderling, Nico A1 - Winkelmann, Ricarda A1 - Donges, Jonathan T1 - What do we mean, 'tipping cascade'? JF - Environmental research letters : ERL N2 - Based on suggested interactions of potential tipping elements in the Earth's climate and in ecological systems, tipping cascades as possible dynamics are increasingly discussed and studied. The activation of such tipping cascades would impose a considerable risk for human societies and biosphere integrity. However, there are ambiguities in the description of tipping cascades within the literature so far. Here we illustrate how different patterns of multiple tipping dynamics emerge from a very simple coupling of two previously studied idealized tipping elements. In particular, we distinguish between a two phase cascade, a domino cascade and a joint cascade. A mitigation of an unfolding two phase cascade may be possible and common early warning indicators are sensitive to upcoming critical transitions to a certain degree. In contrast, a domino cascade may hardly be stopped once initiated and critical slowing down-based indicators fail to indicate tipping of the following element. These different potentials for intervention and anticipation across the distinct patterns of multiple tipping dynamics should be seen as a call to be more precise in future analyses of cascading dynamics arising from tipping element interactions in the Earth system. KW - tipping cascade KW - domino effect KW - tipping interactions KW - cascading regime KW - shifts KW - early warning indicators Y1 - 2021 U6 - https://doi.org/10.1088/1748-9326/ac3955 SN - 1748-9326 VL - 16 IS - 12 PB - IOP Publ. Ltd. CY - Bristol ER - TY - JOUR A1 - Sperlich, Eric A1 - Köckerling, Martin T1 - The double cluster compound [Nb6Cl14(MeCN)(4)] [Nb6Cl14(pyz)(4)].6MeCN (Me: methyl, pyz: pyrazine) with a layered structure resulting from weak intermolecular interactions JF - Zeitschrift für Naturforschung N2 - The synthesis and the crystal structure of the double cluster compound [Nb6Cl14(MeCN)(4)][Nb6Cl14(pyz)(4)]middot6CH(3)CN are described. The synthesis is based on a partial ligand exchange reaction, which proceeds upon dissolving [Nb6Cl14(pyz)(4)]middot2CH(2)Cl(2) in acetonitrile. The compound is built up of two discrete neutral cluster units, which consist of octahedra of Nb-6 atoms coordinated by 12 edge-bridging chlorido and two terminal chlorido ligands, and four acetonitrile ligands on one and four pyrazine ligands on the other cluster unit. Co-crystallized acetonitrile molecules are also present. The single-crystal structure determination has revealed a cluster arrangement in which the [Nb6Cl14(pyz)(4)] units are connected by (halogen) lone-pair-(pyrazine) pi interactions. These lead to chains of [Nb6Cl14(pyz)(4)] clusters. These chains are further connected to cluster layers by (nitrile-halogen) dipole-dipole interactions, in which the [Nb6Cl14(MeCN)(4)] and co-crystallized MeCN molecules are also involved. These cluster layers are arranged parallel to the crystallographic {011} plane. KW - cluster KW - crystal structure KW - dipole-dipole interaction KW - halide KW - lone-pair-pi interactions KW - niobium Y1 - 2023 U6 - https://doi.org/10.1515/znb-2023-0001 SN - 0932-0776 SN - 1865-7117 VL - 78 IS - 5 SP - 279 EP - 283 PB - De Gruyter CY - Berlin ER - TY - JOUR A1 - Sellem, Laury A1 - Antoni, Rona A1 - Koutsos, Athanasios A1 - Ozen, Ezgi A1 - Wong, Gloria A1 - Ayyad, Hasnaa A1 - Weech, Michelle A1 - Schulze, Matthias Bernd A1 - Wernitz, Andreas A1 - Fielding, Barbara A. A1 - Robertson, M. Denise A1 - Jackson, Kim G. A1 - Griffin, Bruce A. A1 - Lovegrove, Julie A. T1 - Impact of a food-based dietary fat exchange model for replacing dietary saturated with unsaturated fatty acids in healthy men on plasma phospholipids fatty acid profiles and dietary patterns JF - European journal of nutrition N2 - Purpose UK guidelines recommend dietary saturated fatty acids (SFAs) should not exceed 10% total energy (%TE) for cardiovascular disease prevention, with benefits observed when SFAs are replaced with unsaturated fatty acids (UFAs). This study aimed to assess the efficacy of a dietary exchange model using commercially available foods to replace SFAs with UFAs. Methods Healthy men (n = 109, age 48, SD 11 year) recruited to the Reading, Imperial, Surrey, Saturated fat Cholesterol Intervention-1 (RISSCI-1) study (ClinicalTrials.Gov n degrees NCT03270527) followed two sequential 4-week isoenergetic moderate-fat (34%TE) diets: high-SFA (18%TE SFAs, 16%TE UFAs) and low-SFA (10%TE SFAs, 24%TE UFAs). Dietary intakes were assessed using 4-day weighed diet diaries. Nutrient intakes were analysed using paired t-tests, fasting plasma phospholipid fatty acid (PL-FA) profiles and dietary patterns were analysed using orthogonal partial least square discriminant analyses. Results Participants exchanged 10.2%TE (SD 4.1) SFAs for 9.7%TE (SD 3.9) UFAs between the high and low-SFA diets, reaching target intakes with minimal effect on other nutrients or energy intakes. Analyses of dietary patterns confirmed successful incorporation of recommended foods from commercially available sources (e.g. dairy products, snacks, oils, and fats), without affecting participants' overall dietary intakes. Analyses of plasma PL-FAs indicated good compliance to the dietary intervention and foods of varying SFA content. Conclusions RISSCI-1 dietary exchange model successfully replaced dietary SFAs with UFAs in free-living healthy men using commercially available foods, and without altering their dietary patterns. Further intervention studies are required to confirm utility and feasibility of such food-based dietary fat replacement models at a population level. KW - Dietary fat composition KW - Food-exchange model KW - Dietary compliance KW - Dairy biomarkers KW - Dietary fat replacement Y1 - 2022 U6 - https://doi.org/10.1007/s00394-022-02910-2 SN - 1436-6207 SN - 1436-6215 VL - 61 IS - 7 SP - 3669 EP - 3684 PB - Springer CY - Heidelberg ER - TY - JOUR A1 - Maiti, Snehanshu A1 - Makwana, Kirit A1 - Zhang, Heshou A1 - Yan, Huirong T1 - Cosmic-ray transport in magnetohydrodynamic turbulence JF - The astrophysical journal : an international review of spectroscopy and astronomical physics / part 1 N2 - This paper studies cosmic-ray (CR) transport in magnetohydrodynamic (MHD) turbulence. CR transport is strongly dependent on the properties of the magnetic turbulence. We perform test particle simulations to study the interactions of CR with both total MHD turbulence and decomposed MHD modes. The spatial diffusion coefficients and the pitch angle scattering diffusion coefficients are calculated from the test particle trajectories in turbulence. Our results confirm that the fast modes dominate the CR propagation, whereas Alfven and slow modes are much less efficient and have shown similar pitch-angle scattering rates. We investigate the cross field transport on large and small scales. On large/global scales, normal diffusion is observed and the diffusion coefficient is suppressed by M-A(zeta) compared to the parallel diffusion coefficients, with zeta closer to 4 in Alfven modes than that in total turbulence, as theoretically expected. For the CR transport on scales smaller than the turbulence injection scale, both the local and global magnetic reference frames are adopted. Superdiffusion is observed on such small scales in all the cases. Particularly, CR transport in Alfven modes show clear Richardson diffusion in the local reference frame. The diffusion transitions smoothly from the Richardson's one with index 1.5 to normal diffusion as the particle mean free path decreases from lambda(parallel to) >> L to lambda(parallel to) << L, where L is the injection/coherence length of turbulence. Our results have broad applications to CRs in various astrophysical environments. Y1 - 2022 U6 - https://doi.org/10.3847/1538-4357/ac46c8 SN - 1538-4357 VL - 926 IS - 1 PB - Institute of Physics Publ. CY - London ER -