TY  - JOUR
A1  - Omelʹchenko, Oleh E.
T1  - Nonstationary coherence-incoherence patterns in nonlocally coupled heterogeneous phase oscillators
JF  - Chaos : an interdisciplinary journal of nonlinear science
N2  - We consider a large ring of nonlocally coupled phase oscillators and show that apart from stationary chimera states, this system also supports nonstationary coherence-incoherence patterns (CIPs). For identical oscillators, these CIPs behave as breathing chimera states and are found in a relatively small parameter region only. It turns out that the stability region of these states enlarges dramatically if a certain amount of spatially uniform heterogeneity (e.g., Lorentzian distribution of natural frequencies) is introduced in the system. In this case, nonstationary CIPs can be studied as stable quasiperiodic solutions of a corresponding mean-field equation, formally describing the infinite system limit. Carrying out direct numerical simulations of the mean-field equation, we find different types of nonstationary CIPs with pulsing and/or alternating chimera-like behavior. Moreover, we reveal a complex bifurcation scenario underlying the transformation of these CIPs into each other. These theoretical predictions are confirmed by numerical simulations of the original coupled oscillator system.
KW  - chimera states
KW  - synchronization
KW  - networks
KW  - Kuramoto
KW  - populations
KW  - dynamics
KW  - bumps
KW  - model
Y1  - 2020
U6  - https://doi.org/10.1063/1.5145259
SN  - 1054-1500
SN  - 1089-7682
VL  - 30
IS  - 4
PB  - American Institute of Physics
CY  - Melville
ER  - 
TY  - JOUR
A1  - Garcia, Sarahi L.
A1  - Buck, Moritz
A1  - McMahon, Katherine D.
A1  - Grossart, Hans-Peter
A1  - Eiler, Alexander
A1  - Warnecke, Falk
T1  - Auxotrophy and intrapopulation complementary in the "interactome' of a cultivated freshwater model community
JF  - Molecular ecology
N2  - Microorganisms are usually studied either in highly complex natural communities or in isolation as monoclonal model populations that we manage to grow in the laboratory. Here, we uncover the biology of some of the most common and yet-uncultured bacteria in freshwater environments using a mixed culture from Lake Grosse Fuchskuhle. From a single shotgun metagenome of a freshwater mixed culture of low complexity, we recovered four high-quality metagenome-assembled genomes (MAGs) for metabolic reconstruction. This analysis revealed the metabolic interconnectedness and niche partitioning of these naturally dominant bacteria. In particular, vitamin- and amino acid biosynthetic pathways were distributed unequally with a member of Crenarchaeota most likely being the sole producer of vitamin B12 in the mixed culture. Using coverage-based partitioning of the genes recovered from a single MAG intrapopulation metabolic complementarity was revealed pointing to social' interactions for the common good of populations dominating freshwater plankton. As such, our MAGs highlight the power of mixed cultures to extract naturally occurring interactomes' and to overcome our inability to isolate and grow the microbes dominating in nature.
KW  - community
KW  - cultures
KW  - interactions
KW  - metagenomics
KW  - populations
Y1  - 2015
U6  - https://doi.org/10.1111/mec.13319
SN  - 0962-1083
SN  - 1365-294X
VL  - 24
IS  - 17
SP  - 4449
EP  - 4459
PB  - Wiley-Blackwell
CY  - Hoboken
ER  -