Dokument-ID Dokumenttyp Verfasser/Autoren Herausgeber Haupttitel Abstract Auflage Verlagsort Verlag Erscheinungsjahr Seitenzahl Schriftenreihe Titel Schriftenreihe Bandzahl ISBN Quelle der Hochschulschrift Konferenzname Quelle:Titel Quelle:Jahrgang Quelle:Heftnummer Quelle:Erste Seite Quelle:Letzte Seite URN DOI Abteilungen OPUS4-31661 Wissenschaftlicher Artikel Giese, Holger; Wagner, Robert From model transformation to incremental bidirectional model synchronization The model-driven software development paradigm requires that appropriate model transformations are applicable in different stages of the development process. The transformations have to consistently propagate changes between the different involved models and thus ensure a proper model synchronization. However, most approaches today do not fully support the requirements for model synchronization and focus only on classical one-way batch-oriented transformations. In this paper, we present our approach for an incremental model transformation which supports model synchronization. Our approach employs the visual, formal, and bidirectional transformation technique of triple graph grammars. Using this declarative specification formalism, we focus on the efficient execution of the transformation rules and how to achieve an incremental model transformation for synchronization purposes. We present an evaluation of our approach and demonstrate that due to the speedup for the incremental processing in the average case even larger models can be tackled. 2009 10.1007/s10270-008-0089-9 Hasso-Plattner-Institut für Digital Engineering gGmbH OPUS4-4311 misc Riano-Pachon, Diego Mauricio; Nagel, Axel; Neigenfind, Jost; Wagner, Robert; Basekow, Rico; Weber, Elke; Müller-Röber, Bernd; Diehl, Svenja; Kersten, Birgit GabiPD : the GABI primary database - a plant integrative "omics" database The GABI Primary Database, GabiPD (http:// www.gabipd.org/), was established in the frame of the German initiative for Genome Analysis of the Plant Biological System (GABI). The goal of GabiPD is to collect, integrate, analyze and visualize primary information from GABI projects. GabiPD constitutes a repository and analysis platform for a wide array of heterogeneous data from high-throughput experiments in several plant species. Data from different 'omics' fronts are incorporated (i.e. genomics, transcriptomics, proteomics and metabolomics), originating from 14 different model or crop species. We have developed the concept of GreenCards for textbased retrieval of all data types in GabiPD (e.g. clones, genes, mutant lines). All data types point to a central Gene GreenCard, where gene information is integrated from genome projects or NCBI UniGene sets. The centralized Gene GreenCard allows visualizing ESTs aligned to annotated transcripts as well as displaying identified protein domains and gene structure. Moreover, GabiPD makes available interactive genetic maps from potato and barley, and protein 2DE gels from Arabidopsis thaliana and Brassica napus. Gene expression and metabolic-profiling data can be visualized through MapManWeb. By the integration of complex data in a framework of existing knowledge, GabiPD provides new insights and allows for new interpretations of the data. 2009 urn:nbn:de:kobv:517-opus-45075 Institut für Biochemie und Biologie