@article{Goychuk2017, author = {Goychuk, Igor}, title = {Quantum ergodicity breaking in semi-classical electron transfer dynamics}, series = {Physical chemistry, chemical physics : a journal of European Chemical Societies}, volume = {19}, journal = {Physical chemistry, chemical physics : a journal of European Chemical Societies}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1463-9076}, doi = {10.1039/c6cp07206b}, pages = {3056 -- 3066}, year = {2017}, abstract = {Can the statistical properties of single-electron transfer events be correctly predicted within a common equilibrium ensemble description? This fundamental in nanoworld question of ergodic behavior is scrutinized within a very basic semi-classical curve-crossing problem. It is shown that in the limit of non-adiabatic electron transfer (weak tunneling) well-described by the Marcus-Levich-Dogonadze (MLD) rate the answer is yes. However, in the limit of the so-called solvent-controlled adiabatic electron transfer, a profound breaking of ergodicity occurs. Namely, a common description based on the ensemble reduced density matrix with an initial equilibrium distribution of the reaction coordinate is not able to reproduce the statistics of single-trajectory events in this seemingly classical regime. For sufficiently large activation barriers, the ensemble survival probability in a state remains nearly exponential with the inverse rate given by the sum of the adiabatic curve crossing (Kramers) time and the inverse MLD rate. In contrast, near to the adiabatic regime, the single-electron survival probability is clearly non-exponential, even though it possesses an exponential tail which agrees well with the ensemble description. Initially, it is well described by a Mittag-Leffler distribution with a fractional rate. Paradoxically, the mean transfer time in this classical on the ensemble level regime is well described by the inverse of the nonadiabatic quantum tunneling rate on a single particle level. An analytical theory is developed which perfectly agrees with stochastic simulations and explains our findings.}, language = {en} } @article{KunnusJosefssonSchrecketal.2017, author = {Kunnus, Kristjan and Josefsson, I. and Schreck, Simon Frederik and Quevedo, W. and Miedema, P. S. and Techert, S. and de Groot, F. M. F. and F{\"o}hlisch, Alexander and Odelius, M. and Wernet, Ph.}, title = {Quantifying covalent interactions with resonant inelastic soft X-ray scattering}, series = {Chemical physics letters}, volume = {669}, journal = {Chemical physics letters}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0009-2614}, doi = {10.1016/j.cplett.2016.12.046}, pages = {196 -- 201}, year = {2017}, abstract = {We analyze the effects of covalent interactions in Ni 2p3d resonant inelastic X-ray scattering (RIXS) spectra from aqueous Ni2+ ions and find that the relative RIXS intensities of ligand-to-metal charge-transfer final states with respect to the ligand-field final states reflect the covalent mixing between Ni 3d and water orbitals. Specifically, the experimental intensity ratio at the Ni L-3-edge allows to determine that the Ni 3d orbitals have on average 5.5\% of water character. We propose that 2p3d RIXS at the Ni L-3-edge can be utilized to quantify covalency in Ni complexes without the use of external references or simulations.}, language = {en} } @article{HusemannBielbyJahnkeetal.2018, author = {Husemann, Bernd and Bielby, R. and Jahnke, K. and Arrigoni-Battaia, F. and Worseck, Gabor and Shanks, T. and Wardlow, J. and Scholtz, J.}, title = {Cosmic dance at z similar to 3}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {614}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201833363}, pages = {5}, year = {2018}, abstract = {We recently discovered that the luminous radio-quiet (QSO) LBQS 0302-0019 at z=3.286 is likely accompanied by an obscured AGN at 20 kpc projected distance, which we dubbed Jil. It represents the tightest candidate obscured/unobscured dual AGN system at z >3. To verify the dual AGN scenario we obtained deep K-s band (rest-frame V band) imaging with the VLT/HAWK-I+GRAAL instrument at 0 '.4 resolution during science verification in January 2018. Indeed, we detect the individual host galaxies of the QSO and Jil with estimated stellar masses of log(M-*/M-circle dot)=11.4 +/- 0.5 and log(M-*/M-circle dot)=10.9 +/- 0.5, respectively. Near-IR spectra obtained with VLT-KMOS reveal a clear [O-III] lambda 5007 line detection at the location of Jil which does not contribute significantly to the Ks band flux. Both observations therefore corroborate the dual AGN scenario. A comparison to Illustris cosmological simulations suggests a parent halo mass of log(M-halo/M-*)=13.2 +/- 0.5 for this interacting galaxy system, corresponding to a very massive dark matter halo at that epoch.}, language = {en} } @article{SanchezAyasodelValleMartietal.2018, author = {Sanchez-Ayaso, Mar{\´i}a de la Estrella and del Valle, Maria Victoria and Marti, Josep and Romero, G. E. and Luque-Escamilla, Pedro Luis}, title = {Possible association of two Stellar Bowshocks with Unidentified Fermi Sources}, series = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, volume = {861}, journal = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, number = {1}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {0004-637X}, doi = {10.3847/1538-4357/aac7c7}, pages = {9}, year = {2018}, abstract = {The bowshocks of runaway stars had been theoretically proposed as gamma-ray sources. However, this hypothesis has not been confirmed by observations to date. In this paper, we present two runaway stars (lambda Cep and LS 2355) whose bowshocks are coincident with the unidentified Fermi gamma-ray sources 3FLG J2210.1+5925 and 3FGL J1128.7-6232, respectively. After performing a cross-correlation between different catalogs at distinct wavelengths, we found that these bowshocks are the most peculiar objects in the Fermi position ellipses. Then we computed the inverse Compton emission and fitted the Fermi data in order to test the viability of both runaway stars as potential counterparts of the two high-energy sources. We obtained very reasonable values for the fitted parameters of both stars. We also evaluated the possibility for the source 3FGL J1128.7-6232, which is positionally coincident with a H II region, to be the result of background cosmic-ray protons interacting with the matter of the cloud, as well as the probability of a pure chance association. We conclude that the gamma rays from these Fermi sources might be produced in the bowshocks of the considered runaway stars. In such a case, these would be the first sources of this class ever detected at gamma rays.}, language = {en} } @article{KegelesOritiTomlin2018, author = {Kegeles, Alexander and Oriti, Daniele and Tomlin, Casey}, title = {Inequivalent coherent state representations in group field theory}, series = {Classical and quantum gravit}, volume = {35}, journal = {Classical and quantum gravit}, number = {12}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {0264-9381}, doi = {10.1088/1361-6382/aac39f}, pages = {23}, year = {2018}, abstract = {In this paper we propose an algebraic formulation of group field theory and consider non-Fock representations based on coherent states. We show that we can construct representations with an infinite number of degrees of freedom on compact manifolds. We also show that these representations break translation symmetry. Since such representations can be regarded as quantum gravitational systems with an infinite number of fundamental pre-geometric building blocks, they may be more suitable for the description of effective geometrical phases of the theory.}, language = {en} } @article{QuadeAbelKutzetal.2018, author = {Quade, Markus and Abel, Markus and Kutz, J. Nathan and Brunton, Steven L.}, title = {Sparse identification of nonlinear dynamics for rapid model recovery}, series = {Chaos : an interdisciplinary journal of nonlinear science}, volume = {28}, journal = {Chaos : an interdisciplinary journal of nonlinear science}, number = {6}, publisher = {American Institute of Physics}, address = {Melville}, issn = {1054-1500}, doi = {10.1063/1.5027470}, pages = {10}, year = {2018}, abstract = {Big data have become a critically enabling component of emerging mathematical methods aimed at the automated discovery of dynamical systems, where first principles modeling may be intractable. However, in many engineering systems, abrupt changes must be rapidly characterized based on limited, incomplete, and noisy data. Many leading automated learning techniques rely on unrealistically large data sets, and it is unclear how to leverage prior knowledge effectively to re-identify a model after an abrupt change. In this work, we propose a conceptual framework to recover parsimonious models of a system in response to abrupt changes in the low-data limit. First, the abrupt change is detected by comparing the estimated Lyapunov time of the data with the model prediction. Next, we apply the sparse identification of nonlinear dynamics (SINDy) regression to update a previously identified model with the fewest changes, either by addition, deletion, or modification of existing model terms. We demonstrate this sparse model recovery on several examples for abrupt system change detection in periodic and chaotic dynamical systems. Our examples show that sparse updates to a previously identified model perform better with less data, have lower runtime complexity, and are less sensitive to noise than identifying an entirely new model. The proposed abrupt-SINDy architecture provides a new paradigm for the rapid and efficient recovery of a system model after abrupt changes.}, language = {en} } @article{YeKurthHospodarskyetal.2018, author = {Ye, S. -Y. and Kurth, William S. and Hospodarsky, George B. and Persoon, Ann M. and Gurnett, Don A. and Morooka, Michiko and Wahlund, Jan-Erik and Hsu, Hsiang-Wen and Seiss, Martin and Srama, Ralf}, title = {Cassini RPWS dust observation near the Janus/Epimetheus orbit}, series = {Journal of geophysical research : Space physics}, volume = {123}, journal = {Journal of geophysical research : Space physics}, number = {6}, publisher = {American Geophysical Union}, address = {Washington}, issn = {2169-9380}, doi = {10.1029/2017JA025112}, pages = {4952 -- 4960}, year = {2018}, abstract = {During the Ring Grazing orbits near the end of Cassini mission, the spacecraft crossed the equatorial plane near the orbit of Janus/Epimetheus (similar to 2.5 Rs). This region is populated with dust particles that can be detected by the Radio and Plasma Wave Science (RPWS) instrument via an electric field antenna signal. Analysis of the voltage waveforms recorded on the RPWS antennas provides estimations of the density and size distribution of the dust particles. Measured RPWS profiles, fitted with Lorentzian functions, are shown to be mostly consistent with the Cosmic Dust Analyzer, the dedicated dust instrument on board Cassini. The thickness of the dusty ring varies between 600 and 1,000 km. The peak location shifts north and south within 100 km of the ring plane, likely a function of the precession phase of Janus orbit.}, language = {en} } @article{EstradaDelvenneHatanoetal.2018, author = {Estrada, Ernesto and Delvenne, Jean-Charles and Hatano, Naomichi and Mateos, Jose L. and Metzler, Ralf and Riascos, Alejandro P. and Schaub, Michael T.}, title = {Random multi-hopper model}, series = {Journal of Complex Networks}, volume = {6}, journal = {Journal of Complex Networks}, number = {3}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {2051-1310}, doi = {10.1093/comnet/cnx043}, pages = {382 -- 403}, year = {2018}, abstract = {We develop a mathematical model considering a random walker with long-range hops on arbitrary graphs. The random multi-hopper can jump to any node of the graph from an initial position, with a probability that decays as a function of the shortest-path distance between the two nodes in the graph. We consider here two decaying functions in the form of Laplace and Mellin transforms of the shortest-path distances. We prove that when the parameters of these transforms approach zero asymptotically, the hitting time in the multi-hopper approaches the minimum possible value for a normal random walker. We show by computational experiments that the multi-hopper explores a graph with clusters or skewed degree distributions more efficiently than a normal random walker. We provide computational evidences of the advantages of the random multi-hopper model with respect to the normal random walk by studying deterministic, random and real-world networks.}, language = {en} } @article{WetterichSchirrmeisteNazarovaetal.2018, author = {Wetterich, Sebastian and Schirrmeiste, Lutz and Nazarova, Larisa B. and Palagushkina, Olga and Bobrov, Anatoly and Pogosyan, Lilit and Savelieva, Larisa and Syrykh, Liudmila and Matthes, Heidrun and Fritz, Michael and G{\"u}nther, Frank and Opel, Thomas and Meyer, Hanno}, title = {Holocene thermokarst and pingo development in the Kolyma Lowland (NE Siberia)}, series = {Permafrost and Periglacial Processes}, volume = {29}, journal = {Permafrost and Periglacial Processes}, number = {3}, publisher = {Wiley}, address = {Hoboken}, issn = {1045-6740}, doi = {10.1002/ppp.1979}, pages = {182 -- 198}, year = {2018}, abstract = {Ground ice and sedimentary records of a pingo exposure reveal insights into Holocene permafrost, landscape and climate dynamics. Early to mid-Holocene thermokarst lake deposits contain rich floral and faunal paleoassemblages, which indicate lake shrinkage and decreasing summer temperatures (chironomid-based T-July) from 10.5 to 3.5 cal kyr BP with the warmest period between 10.5 and 8 cal kyr BP. Talik refreezing and pingo growth started about 3.5 cal kyr BP after disappearance of the lake. The isotopic composition of the pingo ice (delta O-18 - 17.1 +/- 0.6 parts per thousand, delta D -144.5 +/- 3.4 parts per thousand, slope 5.85, deuterium excess -7.7 +/- 1.5 parts per thousand) point to the initial stage of closed-system freezing captured in the record. A differing isotopic composition within the massive ice body was found (delta O-18 - 21.3 +/- 1.4 parts per thousand, delta D -165 +/- 11.5 parts per thousand, slope 8.13, deuterium excess 4.9 +/- 3.2 parts per thousand), probably related to the infill of dilation cracks by surface water with quasi-meteoric signature. Currently inactive syngenetic ice wedges formed in the thermokarst basin after lake drainage. The pingo preserves traces of permafrost response to climate variations in terms of ground-ice degradation (thermokarst) during the early and mid-Holocene, and aggradation (wedge-ice and pingo-ice growth) during the late Holocene.}, language = {en} } @article{Keles2021, author = {Keles, Engin}, title = {Spectral signature of atmospheric winds in high-resolution transit observations}, series = {Monthly Notices of the Royal Astronomical Society}, volume = {502}, journal = {Monthly Notices of the Royal Astronomical Society}, number = {1}, publisher = {Oxford Univ. Press}, address = {Oxford}, doi = {10.1093/mnras/stab099}, pages = {1456 -- 1468}, year = {2021}, abstract = {The study of exoplanet atmospheres showed large diversity compared to the planets in our Solar system. Especially Jupiter-type exoplanets orbiting their host star in close orbits, the so-called hot and ultra-hot Jupiters, have been studied in detail due to their enhanced atmospheric signature. Due to their tidally locked status, the temperature difference between the day- and nightside triggers atmospheric winds that can lead to various fingerprints in the observations. Spatially resolved absorption lines during transit such as sodium (Na) could be a good tracer for such winds. Different works resolved the Na absorption lines on different exoplanets which show different line widths. Assuming that this could be attributed to such zonal jet streams, this work models the effect of such winds on synthetic absorption lines. For this, transiting Jupiter-type planets with rotational velocities similar to hot and ultra-hot Jupiter are considered. The investigation shows that high wind velocities could reproduce the broadening of Na-line profiles inferred in different high-resolution transit observations. There is a tendency that the broadening values decrease for planets with lower equilibrium temperature. This could be explained by atmospheric drag induced by the ionization of alkali lines that slow down the zonal jet streams, favouring their existence on hot Jupiter rather than ultra-hot Jupiter.}, language = {en} } @article{HolzmeierWolfGiengeretal.2018, author = {Holzmeier, Fabian and Wolf, Thomas J. A. and Gienger, Christian and Wagner, Isabella and Bozek, J. and Nandi, S. and Nicolas, C. and Fischer, Ingo and G{\"u}hr, Markus and Fink, Reinhold F.}, title = {Normal and resonant Auger spectroscopy of isocyanic acid, HNCO}, series = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, volume = {149}, journal = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, number = {3}, publisher = {American Institute of Physics}, address = {Melville}, issn = {0021-9606}, doi = {10.1063/1.5030621}, pages = {13}, year = {2018}, abstract = {In this paper, we investigate HNCO by resonant and nonresonant Auger electron spectroscopy at the K-edges of carbon, nitrogen, and oxygen, employing soft X-ray synchrotron radiation. In comparison with the isosteric but linear CO2 molecule, spectra of the bent HNCO molecule are similar but more complex due to its reduced symmetry, wherein the degeneracy of the π-orbitals is lifted. Resonant Auger electron spectra are presented at different photon energies over the first core-excited 1s → 10a′ resonance. All Auger electron spectra are assigned based on ab initio configuration interaction computations combined with the one-center approximation for Auger intensities and moment theory to consider vibrational motion. The calculated spectra were scaled by a newly introduced energy scaling factor, and generally, good agreement is found between experiment and theory for normal as well as resonant Auger electron spectra. A comparison of resonant Auger spectra with nonresonant Auger structures shows a slight broadening as well as a shift of the former spectra between -8 and -9 eV due to the spectating electron. Since HNCO is a small molecule and contains the four most abundant atoms of organic molecules, the reported Auger electron decay spectra will provide a benchmark for further theoretical approaches in the computation of core electron spectra.}, language = {en} } @article{GraetzSeissSpahn2018, author = {Gr{\"a}tz, Fabio M. and Seiss, Martin and Spahn, Frank}, title = {Formation of moon-induced gaps in dense planetary rings}, series = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, volume = {862}, journal = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, number = {2}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {0004-637X}, doi = {10.3847/1538-4357/aace00}, pages = {9}, year = {2018}, abstract = {We develop an axisymmetric diffusion model to describe radial density profiles in the vicinity of tiny moons embedded in planetary rings. Our diffusion model accounts for the gravitational scattering of the ring particles by an embedded moon and for the viscous diffusion of the ring matter back into the gap. With test particle simulations, we show that the scattering of the ring particles passing the moon is larger for small impact parameters than estimated by Goldreich \& Tremaine and Namouni. This is significant for modeling the Keeler gap. We apply our model to the gaps of the moons Pan and Daphnis embedded in the outer A ring of Saturn with the aim to estimate the shear viscosity of the ring in the vicinity of the Encke and Keeler gap. In addition, we analyze whether tiny icy moons whose dimensions lie below Cassini's resolution capabilities would be able to explain the gap structure of the C ring and the Cassini division.}, language = {en} } @article{HeHuangLietal.2018, author = {He, Yongli and Huang, Jianping and Li, Dongdong and Xie, Yongkun and Zhang, Guolong and Qi, Yulei and Wang, Shanshan and Totz, Sonja Juliana}, title = {Comparison of the effect of land-sea thermal contrast on interdecadal variations in winter and summer blockings}, series = {Climate dynamics : observational, theoretical and computational research on the climate system}, volume = {51}, journal = {Climate dynamics : observational, theoretical and computational research on the climate system}, number = {4}, publisher = {Springer}, address = {New York}, issn = {0930-7575}, doi = {10.1007/s00382-017-3954-9}, pages = {1275 -- 1294}, year = {2018}, abstract = {The influence of winter and summer land-sea surface thermal contrast on blocking for 1948-2013 is investigated using observations and the coupled model intercomparison project outputs. The land-sea index (LSI) is defined to measure the changes of zonal asymmetric thermal forcing under global warming. The summer LSI shows a slower increasing trend than winter during this period. For the positive of summer LSI, the EP flux convergence induced by the land-sea thermal forcing in the high latitude becomes weaker than normal, which induces positive anomaly of zonal-mean westerly and double-jet structure. Based on the quasiresonance amplification mechanism, the narrow and reduced westerly tunnel between two jet centers provides a favor environment for more frequent blocking. Composite analysis demonstrates that summer blocking shows an increasing trend of event numbers and a decreasing trend of durations. The numbers of the short-lived blocking persisting for 5-9 days significantly increases and the numbers of the long-lived blocking persisting for longer than 10 days has a weak increase than that in negative phase of summer LSI. The increasing transient wave activities induced by summer LSI is responsible for the decreasing duration of blockings. The increasing blocking due to summer LSI can further strengthen the continent warming and increase the summer LSI, which forms a positive feedback. The opposite dynamical effect of LSI on summer and winter blocking are discussed and found that the LSI-blocking negative feedback partially reduces the influence of the above positive feedback and induce the weak summer warming rate.}, language = {en} } @article{LeitnerJosefssonMazzaetal.2018, author = {Leitner, T. and Josefsson, Ida and Mazza, T. and Miedema, Piter S. and Schr{\"o}der, H. and Beye, Martin and Kunnus, Kristjan and Schreck, S. and D{\"u}sterer, Stefan and F{\"o}hlisch, Alexander and Meyer, M. and Odelius, Michael and Wernet, Philippe}, title = {Time-resolved electron spectroscopy for chemical analysis of photodissociation}, series = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, volume = {149}, journal = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, number = {4}, publisher = {American Institute of Physics}, address = {Melville}, issn = {0021-9606}, doi = {10.1063/1.5035149}, pages = {12}, year = {2018}, abstract = {The prototypical photoinduced dissociation of Fe(CO)(5) in the gas phase is used to test time-resolved x-ray photoelectron spectroscopy for studying photochemical reactions. Upon one-photon excitation at 266 nm, Fe(CO)(5) successively dissociates to Fe(CO)(4) and Fe(CO)(3) along a pathway where both fragments retain the singlet multiplicity of Fe(CO)(5). The x-ray free-electron laser FLASH is used to probe the reaction intermediates Fe(CO)(4) and Fe(CO)(3) with time-resolved valence and core-level photoelectron spectroscopy, and experimental results are interpreted with ab initio quantum chemical calculations. Changes in the valence photoelectron spectra are shown to reflect changes in the valenceorbital interactions upon Fe-CO dissociation, thereby validating fundamental theoretical concepts in Fe-CO bonding. Chemical shifts of CO 3 sigma inner-valence and Fe 3 sigma core-level binding energies are shown to correlate with changes in the coordination number of the Fe center. We interpret this with coordination-dependent charge localization and core-hole screening based on calculated changes in electron densities upon core-hole creation in the final ionic states. This extends the established capabilities of steady-state electron spectroscopy for chemical analysis to time-resolved investigations. It could also serve as a benchmark for howcharge and spin density changes in molecular dissociation and excited-state dynamics are expressed in valence and core-level photoelectron spectroscopy. Published by AIP Publishing.}, language = {en} } @article{OlsonAnFanetal.2017, author = {Olson, R. and An, Soon-Il and Fan, Y. and Evans, J. P. and Caesar, Levke}, title = {North Atlantic observations sharpen meridional overturning projections}, series = {Climate dynamics : observational, theoretical and computational research on the climate system}, volume = {50}, journal = {Climate dynamics : observational, theoretical and computational research on the climate system}, number = {11-12}, publisher = {Springer}, address = {New York}, issn = {0930-7575}, doi = {10.1007/s00382-017-3867-7}, pages = {4171 -- 4188}, year = {2017}, abstract = {Atlantic Meridional Overturning Circulation (AMOC) projections are uncertain due to both model errors, as well as internal climate variability. An AMOC slowdown projected by many climate models is likely to have considerable effects on many aspects of global and North Atlantic climate. Previous studies to make probabilistic AMOC projections have broken new ground. However, they do not drift-correct or cross-validate the projections, and do not fully account for internal variability. Furthermore, they consider a limited subset of models, and ignore the skill of models at representing the temporal North Atlantic dynamics. We improve on previous work by applying Bayesian Model Averaging to weight 13 Coupled Model Intercomparison Project phase 5 models by their skill at modeling the AMOC strength, and its temporal dynamics, as approximated by the northern North-Atlantic temperature-based AMOC Index. We make drift-corrected projections accounting for structural model errors, and for the internal variability. Cross-validation experiments give approximately correct empirical coverage probabilities, which validates our method. Our results present more evidence that AMOC likely already started slowing down. While weighting considerably moderates and sharpens our projections, our results are at low end of previously published estimates. We project mean AMOC changes between periods 1960-1999 and 2060-2099 of -4.0 Sv and -6.8 Sv for RCP4.5 and RCP8.5 emissions scenarios respectively. The corresponding average 90\% credible intervals for our weighted experiments are [-7.2, -1.2] and [-10.5, -3.7] Sv respectively for the two scenarios.}, language = {en} } @article{MuzahidFonsecaRobertsetal.2018, author = {Muzahid, S. and Fonseca, G. and Roberts, A. and Rosenwasser, B. and Richter, Philipp and Narayanan, A. and Churchill, C. and Charlton, J.}, title = {COS-Weak: probing the CGM using analogues of weak Mg II absorbers at z < 0.3}, series = {Monthly notices of the Royal Astronomical Society}, volume = {476}, journal = {Monthly notices of the Royal Astronomical Society}, number = {4}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {0035-8711}, doi = {10.1093/mnras/sty529}, pages = {4965 -- 4986}, year = {2018}, abstract = {We present a sample of 34 weak metal line absorbers at z < 0.3 selected by the simultaneous >3σ detections of the Si iiλ1260 and C iiλ1334 absorption lines, with Wr(SiII)<0.2 {\AA} and Wr(CII)<0.3 {\AA}, in archival HST/COS spectra. Our sample increases the number of known low-z 'weak absorbers' by a factor of >5. The column densities of H i and low-ionization metal lines obtained from Voigt profile fitting are used to build simple photoionization models. The inferred densities and line-of-sight thicknesses of the absorbers are in the ranges of -3.3 < log nH/cm-3 < -2.4 and ∼1 pc-50 kpc (median ≈500 pc), respectively. Most importantly, 85 per cent (50 per cent) of these absorbers show a metallicity of [Si/H]>-1.0(0.0)⁠. The fraction of systems showing near-/supersolar metallicity in our sample is significantly higher than in the H i-selected sample of Wotta et al., and the galaxy-selected sample of Prochaska et al., of absorbers probing the circum-galactic medium at similar redshift. A search for galaxies has revealed a significant galaxy-overdensity around these weak absorbers compared to random positions with a median impact parameter of 166 kpc from the nearest galaxy. Moreover, we find the presence of multiple galaxies in ≈80 per cent of the cases, suggesting group environments. The observed dN/dz of 0.8 ± 0.2 indicates that such metal-enriched, compact, dense structures are ubiquitous in the haloes of low-z group galaxies. We suggest that these are transient structures that are related to galactic outflows and/or stripping of metal-rich gas from galaxies.}, language = {en} } @article{MarinoCantalupoLillyetal.2018, author = {Marino, Raffaella Anna and Cantalupo, Sebastiano and Lilly, Simon J. and Gallego, Sofia G. and Straka, Lorrie A. and Borisova, Elena and Pezzulli, Gabriele and Bacon, Roland and Brinchmann, Jarle and Carollo, C. Marcella and Caruana, Joseph and Conseil, Simon and Contini, Thierry and Diener, Catrina and Finley, Hayley and Inami, Hanae and Leclercq, Floriane and Muzahid, Sowgat and Richard, Johan and Schaye, Joop and Wendt, Martin and Wisotzki, Lutz}, title = {Dark Galaxy Candidates at Redshift similar to 3.5 Detected with MUSE}, series = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, volume = {859}, journal = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, number = {1}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {0004-637X}, doi = {10.3847/1538-4357/aab6aa}, pages = {22}, year = {2018}, abstract = {Recent theoretical models suggest that the early phase of galaxy formation could involve an epoch when galaxies are gas rich but inefficient at forming stars: a "dark galaxy" phase. Here, we report the results of our Multi-Unit Spectroscopic Explorer (MUSE) survey for dark galaxies fluorescently illuminated by quasars at z > 3. Compared to previous studies which are based on deep narrowband (NB) imaging, our integral field survey provides a nearly uniform sensitivity coverage over a large volume in redshift space around the quasars as well as full spectral information at each location. Thanks to these unique features, we are able to build control samples at large redshift distances from the quasars using the same data taken under the same conditions. By comparing the rest-frame equivalent width (EW0) distributions of the Ly alpha sources detected in proximity to the quasars and in control samples, we detect a clear correlation between the locations of high-EW0 objects and the quasars. This correlation is not seen in other properties, such as Ly alpha luminosities or volume overdensities, suggesting the possible fluorescent nature of at least some of these objects. Among these, we find six sources without continuum counterparts and EW0 limits larger than 240 angstrom that are the best candidates for dark galaxies in our survey at z > 3.5. The volume densities and properties, including inferred gas masses and star formation efficiencies, of these dark galaxy candidates are similar to those of previously detected candidates at z approximate to 2.4 in NB surveys. Moreover, if the most distant of these are fluorescently illuminated by the quasar, our results also provide a lower limit of t - 60 Myr on the quasar lifetime.}, language = {en} } @article{TotzLoeberTotzetal.2018, author = {Totz, Sonja Juliana and L{\"o}ber, Jakob and Totz, Jan Frederik and Engel, Harald}, title = {Control of transversal instabilities in reaction-diffusion systems}, series = {New journal of physics : the open-access journal for physics}, volume = {20}, journal = {New journal of physics : the open-access journal for physics}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1367-2630}, doi = {10.1088/1367-2630/aabce5}, pages = {16}, year = {2018}, abstract = {In two-dimensional reaction-diffusion systems, local curvature perturbations on traveling waves are typically damped out and vanish. However, if the inhibitor diffuses much faster than the activator, transversal instabilities can arise, leading from flat to folded, spatio-temporally modulated waves and to spreading spiral turbulence. Here, we propose a scheme to induce or inhibit these instabilities via a spatio-temporal feedback loop. In a piecewise-linear version of the FitzHugh-Nagumo model, transversal instabilities and spiral turbulence in the uncontrolled system are shown to be suppressed in the presence of control, thereby stabilizing plane wave propagation. Conversely, in numerical simulations with the modified Oregonator model for the photosensitive Belousov-Zhabotinsky reaction, which does not exhibit transversal instabilities on its own, we demonstrate the feasibility of inducing transversal instabilities and study the emerging wave patterns in a well-controlled manner.}, language = {en} } @article{NunezValdezEfthimiopoulosTaranetal.2018, author = {Nunez Valdez, Maribel and Efthimiopoulos, Ilias and Taran, Michail and Mueller, Jan and Bykova, Elena and McCammon, Catherine and Koch-M{\"u}ller, Monika and Wilke, Max}, title = {Evidence for a pressure-induced spin transition in olivine-type LiFePO4 triphylite}, series = {Physical review : B, Condensed matter and materials physics}, volume = {97}, journal = {Physical review : B, Condensed matter and materials physics}, number = {18}, publisher = {American Physical Society}, address = {College Park}, issn = {2469-9950}, doi = {10.1103/PhysRevB.97.184405}, pages = {9}, year = {2018}, abstract = {We present a combination of first-principles and experimental results regarding the structural and magnetic properties of olivine-type LiFePO4 under pressure. Our investigations indicate that the starting Pbnm phase of LiFePO4 persists up to 70 GPa. Further compression leads to an isostructural transition in the pressure range of 70-75 GPa, inconsistent with a former theoretical study. Considering our first-principles prediction for a high-spin to low-spin transition of Fe2+ close to 72 GPa, we attribute the experimentally observed isostructural transition to a change in the spin state of Fe2+ in LiFePO4. Compared to relevant Fe-bearing minerals, LiFePO4 exhibits the largest onset pressure for a pressure-induced spin state transition.}, language = {en} } @article{VafinLazarFichtneretal.2018, author = {Vafin, Sergei and Lazar, M. and Fichtner, H. and Schlickeiser, R. and Drillisch, M.}, title = {Solar wind temperature anisotropy constraints from streaming instabilities}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {613}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201731852}, pages = {5}, year = {2018}, abstract = {Due to the relatively low rate of particle-particle collisions in the solar wind, kinetic instabilities (e.g., the mirror and firehose) play an important role in regulating large deviations from temperature isotropy. These instabilities operate in the high beta(parallel to) > 1 plasmas, and cannot explain the other limits of the temperature anisotropy reported by observations in the low beta beta(parallel to) < 1 regimes. However, the instability conditions are drastically modified in the presence of streaming (or counterstreaming) components, which are ubiquitous in space plasmas. These effects have been analyzed for the solar wind conditions in a large interval of heliospheric distances, 0.3-2.5 AU. It was found that proton counter-streams are much more crucial for plasma stability than electron ones. Moreover, new instability thresholds can potentially explain all observed bounds on the temperature anisotropy, and also the level of differential streaming in the solar wind.}, language = {en} } @article{VitaliSposiniSliusarenkoetal.2018, author = {Vitali, Silvia and Sposini, Vittoria and Sliusarenko, Oleksii and Paradisi, Paolo and Castellani, Gastone and Pagnini, Gianni}, title = {Langevin equation in complex media and anomalous diffusion}, series = {Interface : journal of the Royal Society}, volume = {15}, journal = {Interface : journal of the Royal Society}, number = {145}, publisher = {Royal Society}, address = {London}, issn = {1742-5689}, doi = {10.1098/rsif.2018.0282}, pages = {10}, year = {2018}, abstract = {The problem of biological motion is a very intriguing and topical issue. Many efforts are being focused on the development of novel modelling approaches for the description of anomalous diffusion in biological systems, such as the very complex and heterogeneous cell environment. Nevertheless, many questions are still open, such as the joint manifestation of statistical features in agreement with different models that can also be somewhat alternative to each other, e.g. continuous time random walk and fractional Brownian motion. To overcome these limitations, we propose a stochastic diffusion model with additive noise and linear friction force (linear Langevin equation), thus involving the explicit modelling of velocity dynamics. The complexity of the medium is parametrized via a population of intensity parameters (relaxation time and diffusivity of velocity), thus introducing an additional randomness, in addition to white noise, in the particle's dynamics. We prove that, for proper distributions of these parameters, we can get both Gaussian anomalous diffusion, fractional diffusion and its generalizations.}, language = {en} } @misc{SzalayPoppeAgarwaletal.2018, author = {Szalay, J. R. and Poppe, A. R. and Agarwal, J. and Britt, D. and Belskaya, I. and Horanyi, M. and Nakamura, T. and Sachse, M. and Spahn, Frank}, title = {Dust Phenomena Relating to Airless Bodies}, series = {Space science reviews}, volume = {214}, journal = {Space science reviews}, number = {5}, publisher = {Springer}, address = {Dordrecht}, issn = {0038-6308}, doi = {10.1007/s11214-018-0527-0}, pages = {47}, year = {2018}, abstract = {Airless bodies are directly exposed to ambient plasma and meteoroid fluxes, making them characteristically different from bodies whose dense atmospheres protect their surfaces from such fluxes. Direct exposure to plasma and meteoroids has important consequences for the formation and evolution of planetary surfaces, including altering chemical makeup and optical properties, generating neutral gas and/or dust exospheres, and leading to the generation of circumplanetary and interplanetary dust grain populations. In the past two decades, there have been many advancements in our understanding of airless bodies and their interaction with various dust populations. In this paper, we describe relevant dust phenomena on the surface and in the vicinity of airless bodies over a broad range of scale sizes from to , with a focus on recent developments in this field.}, language = {en} } @article{CestnikRosenblum2018, author = {Cestnik, Rok and Rosenblum, Michael}, title = {Inferring the phase response curve from observation of a continuously perturbed oscillator}, series = {Scientific reports}, volume = {8}, journal = {Scientific reports}, publisher = {Nature Publ. Group}, address = {London}, issn = {2045-2322}, doi = {10.1038/s41598-018-32069-y}, pages = {10}, year = {2018}, abstract = {Phase response curves are important for analysis and modeling of oscillatory dynamics in various applications, particularly in neuroscience. Standard experimental technique for determining them requires isolation of the system and application of a specifically designed input. However, isolation is not always feasible and we are compelled to observe the system in its natural environment under free-running conditions. To that end we propose an approach relying only on passive observations of the system and its input. We illustrate it with simulation results of an oscillator driven by a stochastic force.}, language = {en} } @article{AkimotoCherstvyMetzler2018, author = {Akimoto, Takuma and Cherstvy, Andrey G. and Metzler, Ralf}, title = {Ergodicity, rejuvenation, enhancement, and slow relaxation of diffusion in biased continuous-time random walks}, series = {Physical review : E, Statistical, nonlinear and soft matter physics}, volume = {98}, journal = {Physical review : E, Statistical, nonlinear and soft matter physics}, number = {2}, publisher = {American Physical Society}, address = {College Park}, issn = {2470-0045}, doi = {10.1103/PhysRevE.98.022105}, pages = {6}, year = {2018}, abstract = {Bias plays an important role in the enhancement of diffusion in periodic potentials. Using the continuous-time random walk in the presence of a bias, we report on an interesting phenomenon for the enhancement of diffusion by the start of the measurement in a random energy landscape. When the variance of the waiting time diverges, in contrast to the bias-free case, the dynamics with bias becomes superdiffusive. In the superdiffusive regime, we find a distinct initial ensemble dependence of the diffusivity. Moreover, the diffusivity can be increased by the aging time when the initial ensemble is not in equilibrium. We show that the time-averaged variance converges to the corresponding ensemble-averaged variance; i.e., ergodicity is preserved. However, trajectory-to-trajectory fluctuations of the time-averaged variance decay unexpectedly slowly. Our findings provide a rejuvenation phenomenon in the superdiffusive regime, that is, the diffusivity for a nonequilibrium initial ensemble gradually increases to that for an equilibrium ensemble when the start of the measurement is delayed.}, language = {en} } @article{CecchiniSchelter2018, author = {Cecchini, Gloria and Schelter, Bj{\"o}rn}, title = {Analytical approach to network inference}, series = {Physical review : E, Statistical, nonlinear and soft matter physics}, volume = {98}, journal = {Physical review : E, Statistical, nonlinear and soft matter physics}, number = {2}, publisher = {American Physical Society}, address = {College Park}, issn = {2470-0045}, doi = {10.1103/PhysRevE.98.022311}, pages = {10}, year = {2018}, abstract = {When the network is reconstructed, two types of errors can occur: false positive and false negative errors about the presence or absence of links. In this paper, the influence of these two errors on the vertex degree distribution is analytically analyzed. Moreover, an analytic formula of the density of the biased vertex degree distribution is found. In the inverse problem, we find a reliable procedure to reconstruct analytically the density of the vertex degree distribution of any network based on the inferred network and estimates for the false positive and false negative errors based on, e.g., simulation studies.}, language = {en} } @article{MardoukhiJeonChechkinetal.2018, author = {Mardoukhi, Yousof and Jeon, Jae-Hyung and Chechkin, Aleksei V. and Metzler, Ralf}, title = {Fluctuations of random walks in critical random environments}, series = {Physical chemistry, chemical physics : a journal of European Chemical Societies}, volume = {20}, journal = {Physical chemistry, chemical physics : a journal of European Chemical Societies}, number = {31}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1463-9076}, doi = {10.1039/c8cp03212b}, pages = {20427 -- 20438}, year = {2018}, abstract = {Percolation networks have been widely used in the description of porous media but are now found to be relevant to understand the motion of particles in cellular membranes or the nucleus of biological cells. Random walks on the infinite cluster at criticality of a percolation network are asymptotically ergodic. On any finite size cluster of the network stationarity is reached at finite times, depending on the cluster's size. Despite of this we here demonstrate by combination of analytical calculations and simulations that at criticality the disorder and cluster size average of the ensemble of clusters leads to a non-vanishing variance of the time averaged mean squared displacement, regardless of the measurement time. Fluctuations of this relevant experimental quantity due to the disorder average of such ensembles are thus persistent and non-negligible. The relevance of our results for single particle tracking analysis in complex and biological systems is discussed.}, language = {en} } @article{KoopmanNataliBettinietal.2018, author = {Koopman, Wouter-Willem Adriaan and Natali, Marco and Bettini, Cristian and Melucci, Manuela and Muccini, Michele and Toffanin, Stefano}, title = {Contact Resistance in Ambipolar Organic Field-Effect Transistors Measured by Confocal Photoluminescence Electro-Modulation Microscopy}, series = {ACS applied materials \& interfaces}, volume = {10}, journal = {ACS applied materials \& interfaces}, number = {41}, publisher = {American Chemical Society}, address = {Washington}, issn = {1944-8244}, doi = {10.1021/acsami.8b05518}, pages = {35411 -- 35419}, year = {2018}, abstract = {Although it is theoretically expected that all organic semiconductors support ambipolar charge transport, most organic transistors either transport holes or electrons effectively. Single-layer ambipolar organic field-effect transistors enable the investigation of different mechanisms in hole and electron transport in a single device since the device architecture provides a controllable planar pn-junction within the transistor channel. However, a direct comparison of the injection barriers and of the channel conductivities between electrons and holes within the same device cannot be measured by standard electrical characterization. This article introduces a novel approach for determining threshold gate voltages for the onset of the ambipolar regime from the position of the pn-junction observed by photoluminescence electromodulation (PLEM) microscopy. Indeed, the threshold gate voltage in the ambipolar bias regime considers a vanishing channel length, thus correlating the contact resistance. PLEM microscopy is a valuable tool to directly compare the contact and channel resistances for both carrier types in the same device. The reported results demonstrate that designing the metal/organic semiconductor interfaces by aligning the bulk metal Fermi levels to the highest occupied molecular orbital or lowest unoccupied molecular orbital levels of the organic semiconductors is a too simplistic approach for optimizing the charge injection process in organic field-effect devices.}, language = {en} } @article{PaalvastVerhammeStrakaetal.2018, author = {Paalvast, M. and Verhamme, A. and Straka, L. A. and Brinchmann, J. and Herenz, Edmund Christian and Carton, D. and Gunawardhana, M. L. P. and Boogaard, L. A. and Cantalupo, S. and Contini, T. and Epinat, Benoit and Inami, H. and Marino, R. A. and Maseda, M. V. and Michel-Dansac, L. and Muzahid, S. and Nanayakkara, T. and Pezzulli, Gabriele and Richard, J. and Schaye, Joop and Segers, M. C. and Urrutia, Tanya and Wendt, Martin and Wisotzki, Lutz}, title = {Properties and redshift evolution of star-forming galaxies with high [0 III]/[O II] ratios with MUSE at 0.28 < z < 0.85}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {618}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {0004-6361}, doi = {10.1051/0004-6361/201832866}, pages = {15}, year = {2018}, abstract = {We present a study of the [O III]/[O II] ratios of star-forming galaxies drawn from Multi-Unit Spectroscopic Explorer (MUSE) data spanning a redshift range 0.28 < z < 0.85. Recently discovered Lyman continuum (LyC) emitters have extremely high oxygen line ratios: [O III]lambda 5007/[O II]lambda lambda 3726, 3729 > 4. Here we aim to understand the properties and the occurrences of galaxies with such high line ratios. Combining data from several MUSE Guaranteed Time Observing (GTO) programmes, we select a population of star-forming galaxies with bright emission lines, from which we draw 406 galaxies for our analysis based on their position in the z-dependent star formation rate (SFR) stellar mass (M*) plane. Out of this sample 15 are identified as extreme oxygen emitters based on their [O III]/[O II] ratios (3.7\%) and 104 galaxies have [O III]/[O II] > 1 (26\%). Our analysis shows no significant correlation between M*, SFR, and the distance from the SFR M, relation with [O III]/[O II]. We find a decrease in the fraction of galaxies with [O III]/[O II] > 1 with increasing M*, however, this is most likely a result of the relationship between [O III]/[O II] and metallicity, rather than between [O III]/[O II] and M. We draw a comparison sample of local analogues with < z > 0.03 from the Sloan Digital Sky Survey, and find similar incidence rates for this sample. In order to investigate the evolution in the fraction of high [O III]/[O II] emitters with redshift, we bin the sample into three redshift subsamples of equal number, but find no evidence for a dependence on redshift. Furthermore, we compare the observed line ratios with those predicted by nebular models with no LyC escape and find that most of the extreme oxygen emitters can be reproduced by low metallicity models. The remaining galaxies are likely LyC emitter candidates.}, language = {en} } @article{MuenchLaepple2018, author = {M{\"u}nch, Thomas and Laepple, Thomas}, title = {What climate signal is contained in decadal- to centennial-scale isotope variations from Antarctic ice cores?}, series = {Climate of the past : CP}, volume = {14}, journal = {Climate of the past : CP}, number = {12}, publisher = {Copernicus Gesellschaft mbH}, address = {G{\"o}ttingen}, issn = {1814-9324}, doi = {10.5194/cp-14-2053-2018}, pages = {2053 -- 2070}, year = {2018}, abstract = {Ice-core-based records of isotopic composition are a proxy for past temperatures and can thus provide information on polar climate variability over a large range of timescales. However, individual isotope records are affected by a multitude of processes that may mask the true temperature variability. The relative magnitude of climate and non-climate contributions is expected to vary as a function of timescale, and thus it is crucial to determine those temporal scales on which the actual signal dominates the noise. At present, there are no reliable estimates of this timescale dependence of the signal-to-noise ratio (SNR). Here, we present a simple method that applies spectral analyses to stable-isotope data from multiple cores to estimate the SNR, and the signal and noise variability, as a function of timescale. The method builds on separating the contributions from a common signal and from local variations and includes a correction for the effects of diffusion and time uncertainty. We apply our approach to firn-core arrays from Dronning Maud Land (DML) in East Antarctica and from the West Antarctic Ice Sheet (WAIS). For DML and decadal to multi-centennial timescales, we find an increase in the SNR by nearly 1 order of magnitude (similar to 0.2 at decadal and similar to 1.0 at multi-centennial scales). The estimated spectrum of climate variability also shows increasing variability towards longer timescales, contrary to what is traditionally inferred from single records in this region. In contrast, the inferred variability spectrum for WAIS stays close to constant over decadal to centennial timescales, and the results even suggest a decrease in SNR over this range of timescales. We speculate that these differences between DML and WAIS are related to differences in the spatial and temporal scales of the isotope signal, highlighting the potentially more homogeneous atmospheric conditions on the Antarctic Plateau in contrast to the marine-influenced conditions on WAIS. In general, our approach provides a methodological basis for separating local proxy variability from coherent climate variations, which is applicable to a large set of palaeoclimate records.}, language = {en} } @misc{LewandowskyCowtanRisbeyetal.2019, author = {Lewandowsky, Stephan and Cowtan, Kevin and Risbey, James S. and Mann, Michael E. and Steinman, Byron A. and Oreskes, Naomi and Rahmstorf, Stefan}, title = {Erratum: The 'pause' in global warming in historical context: II. Comparing models to observations (Environmental research letters. - Vol 13, (2018) 123007)}, series = {Environmental research letters}, volume = {14}, journal = {Environmental research letters}, number = {4}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1748-9326}, doi = {10.1088/1748-9326/aafbb7}, pages = {2}, year = {2019}, abstract = {We review the evidence for a putative early 21st-century divergence between global mean surface temperature (GMST) and Coupled Model Intercomparison Project Phase 5 (CMIP5) projections. We provide a systematic comparison between temperatures and projections using historical versions of GMST products and historical versions of model projections that existed at the times when claims about a divergence were made. The comparisons are conducted with a variety of statistical techniques that correct for problems in previous work, including using continuous trends and a Monte Carlo approach to simulate internal variability. The results show that there is no robust statistical evidence for a divergence between models and observations. The impression of a divergence early in the 21st century was caused by various biases in model interpretation and in the observations, and was unsupported by robust statistics.}, language = {en} } @article{BoumaRichterFechner2019, author = {Bouma, Sietske Jeltje Deirdre and Richter, Philipp and Fechner, Cora}, title = {A population of high-velocity absorption-line systems residing in the Local Group}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {627}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201935078}, pages = {12}, year = {2019}, abstract = {Aims. We investigated the ionisation conditions and distances of Galactic high-velocity clouds (HVCs) in the Galactic halo and beyond in the direction of the Local Group (LG) barycentre and anti-barycentre, by studying spectral data of 29 extragalactic background sources obtained with the Cosmic Origins Spectropgraph (COS) installed on the Hubble Space Telescope (HST). Methods. We model column-densities of low, intermediate, and high ions such as Si ii, C ii, Si iii, Si vi, and C iv, and use these data to construct a set of Cloudy ionisation models. Results. In total, we found 69 high-velocity absorption components along the 29 lines of sight. The components in the direction of the LG barycentre span the entire range of studied velocities, 100 less than or similar to vertical bar nu(LSR)vertical bar less than or similar to 400 km s(-1), while those in the anti-barycentre sample have velocities up to about 300 km s(-1). For 49 components, we infer the gas densities. In the direction of the LG barycentre, the gas densities exhibit a wide range from log nH = -3.96 to -2.55, while in the anti-barycentre direction the densities are systematically higher, log nH > -3.25. The barycentre absorbers can be split into two groups based on their density: a high-density group with log nH > -3.54, which can be affected by the Milky Way radiation field, and a low-density group (log nH <= -3.54). The latter has very low thermal pressures of P/k < 7.3 Kcm(-3). Conclusions. Our study shows that part of the absorbers in the LG barycentre direction trace gas at very low gas densities and thermal pressures. These properties indicate that the absorbers are located beyond the virial radius of the Milky Way. Our study also confirms results from earlier, single-sightline studies, suggesting the presence of a metal-enriched intragroup medium filling the LG near its barycentre.}, language = {en} } @article{CestnikAbel2019, author = {Cestnik, Rok and Abel, Markus}, title = {Inferring the dynamics of oscillatory systems using recurrent neural networks}, series = {Chaos : an interdisciplinary journal of nonlinear science}, volume = {29}, journal = {Chaos : an interdisciplinary journal of nonlinear science}, number = {6}, publisher = {American Institute of Physics}, address = {Melville}, issn = {1054-1500}, doi = {10.1063/1.5096918}, pages = {9}, year = {2019}, abstract = {We investigate the predictive power of recurrent neural networks for oscillatory systems not only on the attractor but in its vicinity as well. For this, we consider systems perturbed by an external force. This allows us to not merely predict the time evolution of the system but also study its dynamical properties, such as bifurcations, dynamical response curves, characteristic exponents, etc. It is shown that they can be effectively estimated even in some regions of the state space where no input data were given. We consider several different oscillatory examples, including self-sustained, excitatory, time-delay, and chaotic systems. Furthermore, with a statistical analysis, we assess the amount of training data required for effective inference for two common recurrent neural network cells, the long short-term memory and the gated recurrent unit. Published under license by AIP Publishing.}, language = {en} } @article{TeomyRoichmanShokef2019, author = {Teomy, Eial and Roichman, Yael and Shokef, Yair}, title = {Multiple peaks in the displacement distribution of active random walkers}, series = {Journal of statistical mechanics: theory and experiment}, volume = {2019}, journal = {Journal of statistical mechanics: theory and experiment}, number = {11}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1742-5468}, doi = {10.1088/1742-5468/ab4fde}, pages = {22}, year = {2019}, abstract = {We consider a simple model for active random walk with general temporal correlations, and investigate the shape of the probability distribution function of the displacement during a short time interval. We find that under certain conditions the distribution exhibits multiple peaks and we show analytically and numerically that the existence of these peaks is governed by the walker?s tendency to move forward, while the correlations between the timing of its active motion control the magnitude and shape of the peaks. In particular, we find that in a homogeneous system such peaks can occur only if the persistence is strong enough.}, language = {en} } @article{DierckeDenker2019, author = {Diercke, Andrea and Denker, Carsten}, title = {Chromospheric Synoptic Maps of Polar Crown Filaments}, series = {Solar physics : a journal for solar and solar-stellar research and the study of solar terrestrial physics}, volume = {294}, journal = {Solar physics : a journal for solar and solar-stellar research and the study of solar terrestrial physics}, number = {11}, publisher = {Springer}, address = {Dordrecht}, issn = {0038-0938}, doi = {10.1007/s11207-019-1538-z}, pages = {17}, year = {2019}, abstract = {Polar crown filaments form above the polarity inversion line between the old magnetic flux of the previous cycle and the new magnetic flux of the current cycle. Studying their appearance and their properties can lead to a better understanding of the solar cycle. We use full-disk data of the Chromospheric Telescope (ChroTel) at the Observatorio del Teide, Tenerife, Spain, which were taken in three different chromospheric absorption lines (H alpha lambda 6563 angstrom, Ca II K lambda 3933 angstrom, and He I lambda 10830 angstrom), and we create synoptic maps. In addition, the spectroscopic He I data allow us to compute Doppler velocities and to create synoptic Doppler maps. ChroTel data cover the rising and decaying phase of Solar Cycle 24 on about 1000 days between 2012 and 2018. Based on these data, we automatically extract polar crown filaments with image-processing tools and study their properties. We compare contrast maps of polar crown filaments with those of quiet-Sun filaments. Furthermore, we present a super-synoptic map summarizing the entire ChroTel database. In summary, we provide statistical properties, i.e. number and location of filaments, area, and tilt angle for both the maximum and the declining phase of Solar Cycle 24. This demonstrates that ChroTel provides a promising data set to study the solar cycle.}, language = {en} } @article{GoettgensHusserKamannetal.2019, author = {G{\"o}ttgens, Fabian and Husser, Tim-Oliver and Kamann, Sebastian and Dreizler, Stefan and Giesers, Benjamin and Kollatschny, Wolfram and Weilbacher, Peter Michael and Roth, Martin M. and Wendt, Martin}, title = {A stellar census in globular clusters with MUSE: A spectral catalogue of emission-line sources}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {631}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {0004-6361}, doi = {10.1051/0004-6361/201936485}, pages = {16}, year = {2019}, abstract = {Aims. Globular clusters produce many exotic stars due to a much higher frequency of dynamical interactions in their dense stellar environments. Some of these objects were observed together with several hundred thousand other stars in our MUSE survey of 26 Galactic globular clusters. Assuming that at least a few exotic stars have exotic spectra (i.e. spectra that contain emission lines), we can use this large spectroscopic data set of over a million stellar spectra as a blind survey to detect stellar exotica in globular clusters. Methods. To detect emission lines in each spectrum, we modelled the expected shape of an emission line as a Gaussian curve. This template was used for matched filtering on the di fferences between each observed 1D spectrum and its fitted spectral model. The spectra with the most significant detections of H alpha emission are checked visually and cross-matched with published catalogues. Results. We find 156 stars with H alpha emission, including several known cataclysmic variables (CV) and two new CVs, pulsating variable stars, eclipsing binary stars, the optical counterpart of a known black hole, several probable sub-subgiants and red stragglers, and 21 background emission-line galaxies. We find possible optical counterparts to 39 X-ray sources, as we detected H alpha emission in several spectra of stars that are close to known positions of Chandra X-ray sources. This spectral catalogue can be used to supplement existing or future X-ray or radio observations with spectra of potential optical counterparts to classify the sources.}, language = {en} } @article{HsuKrekhovTarantolaetal.2019, author = {Hsu, H. F. and Krekhov, Andrey and Tarantola, Marco and Beta, Carsten and Bodenschatz, Eberhardt}, title = {Interplay between myosin II and actin dynamics in chemotactic amoeba}, series = {New journal of physics : the open-access journal for physics}, volume = {21}, journal = {New journal of physics : the open-access journal for physics}, number = {11}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1367-2630}, doi = {10.1088/1367-2630/ab5822}, pages = {15}, year = {2019}, abstract = {The actin cytoskeleton and its response to external chemical stimuli is fundamental to the mechano-biology of eukaryotic cells and their functions. One of the key players that governs the dynamics of the actin network is the motor protein myosin II. Based on a phase space embedding we have identified from experiments three phases in the cytoskeletal dynamics of starved Dictyostelium discoideum in response to a precisely controlled chemotactic stimulation. In the first two phases the dynamics of actin and myosin II in the cortex is uncoupled, while in the third phase the time scale for the recovery of cortical actin is determined by the myosin II dynamics. We report a theoretical model that captures the experimental observations quantitatively. The model predicts an increase in the optimal response time of actin with decreasing myosin II-actin coupling strength highlighting the role of myosin II in the robust control of cell contraction.}, language = {en} } @article{KarKoerzdoerfer2018, author = {Kar, M. and K{\"o}rzd{\"o}rfer, Thomas}, title = {Computational screening of methylammonium based halide perovskites with bandgaps suitable for perovskite-perovskite tandem solar cells}, series = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, volume = {149}, journal = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, number = {21}, publisher = {American Institute of Physics}, address = {Melville}, issn = {0021-9606}, doi = {10.1063/1.5037535}, pages = {7}, year = {2018}, abstract = {We aim to find homovalent alternatives for lead and iodine in CH3NH3PbI3 perovskites that show bandgaps suitable for building novel perovskite-perovskite tandem solar cells. To this end, we employ a computational screening for materials with a bandgap between 1.0 eV and 1.9 eV, using density functional theory calculations at the Perdew-Burke-Ernzerhof and Heyd-Scuseria-Ernzerhof levels of theory. The room-temperature stability of the materials and their phases that satisfy the bandgap criteria is evaluated based on the empirical Goldschmidt tolerance factor. In total, our screening procedure covers 30 different perovskite structures in three phases (orthorhombic, cubic, tetragonal) each. We find 9 materials that are predicted to be stable at room temperature and to have bandgaps in an energy range suitable for application in tandem solar cells. Published by AIP Publishing.}, language = {en} } @article{KayserMaturilliGrahametal.2017, author = {Kayser, Markus and Maturilli, Marion and Graham, Robert M. and Hudson, Stephen R. and Rinke, Annette and Cohen, Lana and Kim, Joo-Hong and Park, Sang-Jong and Moon, Woosok and Granskog, Mats A.}, title = {Vertical thermodynamic structure of the troposphere during the Norwegian young sea ICE expedition (N-ICE2015)}, series = {Journal of geophysical research-atmosheres}, volume = {122}, journal = {Journal of geophysical research-atmosheres}, number = {20}, publisher = {American Geophysical Union}, address = {Washington}, issn = {2169-897X}, doi = {10.1002/2016JD026089}, pages = {10855 -- 10872}, year = {2017}, abstract = {The Norwegian young sea ICE (N-ICE2015) expedition was designed to investigate the atmosphere-snow-ice-ocean interactions in the young and thin sea ice regime north of Svalbard. Radiosondes were launched twice daily during the expedition from January to June 2015. Here we use these upper air measurements to study the multiple cyclonic events observed during N-ICE2015 with respect to changes in the vertical thermodynamic structure, moisture content, and boundary layer characteristics. We provide statistics of temperature inversion characteristics, static stability, and boundary layer extent. During winter, when radiative cooling is most effective, we find the strongest impact of synoptic cyclones. Changes to thermodynamic characteristics of the boundary layer are associated with transitions between the radiatively "clear" and "opaque" atmospheric states. In spring, radiative fluxes warm the surface leading to lifted temperature inversions and a statically unstable boundary layer. Further, we compare the N-ICE2015 static stability distributions to corresponding profiles from ERA-Interim reanalysis, from the closest land station in the Arctic North Atlantic sector, Ny-Alesund, and to soundings from the SHEBA expedition (1997/1998). We find similar stability characteristics for N-ICE2015 and SHEBA throughout the troposphere, despite differences in location, sea ice thickness, and snow cover. For Ny-Alesund, we observe similar characteristics above 1000 m, while the topography and ice-free fjord surrounding Ny-Alesund generate great differences below. The long-term radiosonde record (1993-2014) from Ny-Alesund indicates that during the N-ICE2015 spring period, temperatures were close to the climatological mean, while the lowest 3000 m were 1-3 degrees C warmer than the climatology during winter. Plain Language Summary The Norwegian young sea ICE (N-ICE2015) expedition was designed to investigate the atmosphere-snow-ice-ocean interactions in the young and thin sea ice regime north of Svalbard. Radiosondes were launched twice daily during the expedition from January to June 2015. Here we use these upper air measurements to study the multiple cyclonic events observed during N-ICE2015 with respect to changes in the vertical thermodynamic structure, moisture content, and the atmospheric boundary layer characteristics. During winter, we find the strongest impact of synoptic cyclones, which transport warm and moist air into the cold and dry Arctic atmosphere. In spring, incoming solar radiation warms the surface. This leads to very different thermodynamic conditions and higher moisture content, which reduces the contrast between stormy and calm periods. Further, we compare the N-ICE2015 measurements to corresponding profiles from ERA-Interim reanalysis, from the closest land station in the Arctic North Atlantic sector, Ny-Alesund, and to soundings from the SHEBA expedition (1997/1998). We find similar stability characteristics for N-ICE2015 and SHEBA throughout the troposphere, despite differences in location, sea ice thickness, and snow cover. The comparisons highlight the value of the N-ICE2015 observation and show the importance of winter time observations in the Arctic North Atlantic sector.}, language = {en} } @article{RodriguezZuluagaStolleYamazakietal.2019, author = {Rodriguez-Zuluaga, Juan and Stolle, Claudia and Yamazaki, Yosuke and L{\"u}hr, H. and Park, J. and Scherliess, L. and Chau, J. L.}, title = {On the balance between plasma and magnetic pressure across equatorial plasma depletions}, series = {Journal of geophysical research : Space physics}, volume = {124}, journal = {Journal of geophysical research : Space physics}, number = {7}, publisher = {American Geophysical Union}, address = {Washington}, issn = {2169-9402}, doi = {10.1029/2019JA026700}, pages = {5936 -- 5944}, year = {2019}, abstract = {In magnetized plasmas such as the ionosphere, electric currents develop in regions of strong density gradients to balance the resulting plasma pressure gradients. These currents, usually known as diamagnetic currents decrease the magnetic pressure where the plasma pressure increases, and vice versa. In the low-latitude ionosphere, equatorial plasma depletions (EPDs) are well known for their steep plasma density gradients and adverse effect on radio wave propagation. In this paper, we use continuous measurements of the magnetic field and electron density from the European Space Agency's Swarm constellation mission to assess the balance between plasma and magnetic pressure across large-scale EPDs. The analysis is based on the magnetic fluctuations related to diamagnetic currents flowing at the edges of EPDs. This study shows that most of the EPDs detected by Swarm present a decrease of the plasma pressure relative to the ambient plasma. However, EPDs with high plasma pressure are also identified mainly in the vicinity of the South Atlantic magnetic anomaly. From the electron density measurements, we deduce that such an increase in plasma pressure within EPDs might be possible by temperatures inside the EPD as high as twice the temperature of the ambient plasma. Due to the distinct location of the high-pressure EPDs, we suggest that a possible heating mechanism might be due to precipitation of particle from the radiation belts. This finding corresponds to the first observational evidence of plasma pressure enhancements in regions of depleted plasma density in the ionosphere.}, language = {en} } @article{QuessabDebGorchonetal.2019, author = {Quessab, Yassine and Deb, Marwan and Gorchon, J. and Hehn, M. and Malinowski, Gregory and Mangin, S.}, title = {Resolving the role of magnetic circular dichroism in multishot helicity-dependent all-optical switching}, series = {Physical review : B, Condensed matter and materials physics}, volume = {100}, journal = {Physical review : B, Condensed matter and materials physics}, number = {2}, publisher = {American Physical Society}, address = {College Park}, issn = {2469-9950}, doi = {10.1103/PhysRevB.100.024425}, pages = {5}, year = {2019}, abstract = {By conducting helicity-dependent ultrafast magnetization dynamics in a CoTb ferrimagnetic alloy, we are able to quantitatively determine the magnetic circular dichroism (MCD) and resolve its role in the helicity-dependent all-optical switching (AOS). Unequivocal interpretation of the sign of the dichroism is provided by performing AOS and femtosecond laser-induced domain wall motion experiments. We demonstrate that AOS occurs when the magnetization is initially in the most absorbent state, according to the light helicity. Moreover, we evidence that the MCD creates a thermal gradient that drives a domain wall toward hotter regions. Our experimental results are in agreement with the purely thermal models of AOS.}, language = {en} } @article{SokolovHuangSenfetal.2019, author = {Sokolov, Andrey and Huang, Qiushi and Senf, Friedmar and Feng, Jiangtao and Lemke, Stephanie and Alimov, Svyatoslav and Knedel, Jeniffa and Zeschke, Thomas and Kutz, Oliver and Seliger, Tino and Gwalt, Grzegorz and Sch{\"a}fers, Franz and Siewert, Frank and Kozhevnikov, Igor and Qi, Runze and Zhang, Zhong and Li, Wenbin and Wang, Zhanshan}, title = {Optimized highly efficient multilayer-coated blazed gratings for the tender X-ray region}, series = {Optics express : the international electronic journal of optics}, volume = {27}, journal = {Optics express : the international electronic journal of optics}, number = {12}, publisher = {Optical Society of America}, address = {Washington}, issn = {1094-4087}, doi = {10.1364/OE.27.016833}, pages = {16833 -- 16846}, year = {2019}, abstract = {The optimized design of multilayer-coated blazed gratings (MLBG) for high-flux tender X-ray monochromators was systematically studied by numerical simulations. The resulting correlation between the multilayer d-spacing and grating blaze angle significantly deviated from the one predicted by conventional equations. Three high line density gratings with different blaze angles were fabricated and coated by the same Cr/C multilayer. The MLBG with an optimal blaze angle of 1.0 degrees showed a record efficiency reaching 60\% at 3.1 keV and 4.1 keV. The measured efficiencies of all three gratings were consistent with calculated results proving the validity of the numerical simulation and indicating a more rigorous way to design the optimal MLBG structure. Published by The Optical Society under the terms of the Creative Commons Attribution 4.0 License.}, language = {en} } @article{ZaldenQuirinSchumacheretal.2019, author = {Zalden, Peter and Quirin, Florian and Schumacher, Mathias and Siegel, Jan and Wei, Shuai and Koc, Azize and Nicoul, Matthieu and Trigo, Mariano and Andreasson, Pererik and Enquist, Henrik and Shu, Michael J. and Pardini, Tommaso and Chollet, Matthieu and Zhu, Diling and Lemke, Henrik and Ronneberger, Ider and Larsson, J{\"o}rgen and Lindenberg, Aaron M. and Fischer, Henry E. and Hau-Riege, Stefan and Reis, David A. and Mazzarello, Riccardo and Wuttig, Matthias and Sokolowski-Tinten, Klaus}, title = {Femtosecond x-ray diffraction reveals a liquid-liquid phase transition in phase-change materials}, series = {Science}, volume = {364}, journal = {Science}, number = {6445}, publisher = {American Assoc. for the Advancement of Science}, address = {Washington, DC}, issn = {0036-8075}, doi = {10.1126/science.aaw1773}, pages = {1062 -- 1067}, year = {2019}, abstract = {In phase-change memory devices, a material is cycled between glassy and crystalline states. The highly temperature-dependent kinetics of its crystallization process enables application in memory technology, but the transition has not been resolved on an atomic scale. Using femtosecond x-ray diffraction and ab initio computer simulations, we determined the time-dependent pair-correlation function of phase-change materials throughout the melt-quenching and crystallization process. We found a liquid-liquid phase transition in the phase-change materials Ag4In3Sb67Te26 and Ge15Sb85 at 660 and 610 kelvin, respectively. The transition is predominantly caused by the onset of Peierls distortions, the amplitude of which correlates with an increase of the apparent activation energy of diffusivity. This reveals a relationship between atomic structure and kinetics, enabling a systematic optimization of the memory-switching kinetics.}, language = {en} } @article{BetkeLokstein2019, author = {Betke, Alexander and Lokstein, Heiko}, title = {Two-photon excitation spectroscopy of photosynthetic light-harvesting complexes and pigments}, series = {Faraday discussions}, volume = {216}, journal = {Faraday discussions}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1359-6640}, doi = {10.1039/c8fd00198g}, pages = {494 -- 506}, year = {2019}, abstract = {In addition to (bacterio)chlorophylls, (B)Chls, light-harvesting complexes (LHCs) bind carotenoids, and/or their oxygen derivatives, xanthophylls. Xanthophylls/carotenoids have pivotal functions in LHCs: in stabilization of the structure, as accessory light-harvesting pigments and, probably most importantly, in photoprotection. Xanthophylls are assumed to be involved in the not yet fully understood mechanism of energy-dependent (qE) non-photochemical quenching of Chl fluorescence (NPQ) in higher plants and algae. The so called "xanthophyll cycle" appears to be crucial in this regard. The molecular mechanism(s) of xanthophyll involvement in qE/NPQ have not been established, yet. Moreover, excitation energy transfer (EET) processes involving carotenoids are also difficult to study, due to the fact that transitions between the ground state (S-0, 1(1)A(g)(-)) and the lowest excited singlet state (S-1, 2(1)A(g)(-)) of carotenoids are optically one-photon forbidden ("dark"). Two-photon excitation spectroscopic techniques have been used for more than two decades to study one-photon forbidden states of carotenoids. In the current study, two-photon excitation profiles of LHCII samples containing different xanthophyll complements were measured in the presumed 1(1)A(g)(-) -> 2(1)A(g)(-) (S-0 -> S-1) transition spectral region of the xanthophylls, as well as for isolated chlorophylls a and b in solution. The results indicate that direct two-photon excitation of Chls in this spectral region is dominant over that by xanthophylls. Implications of the results for proposed mechanism(s) of qE/NPQ will be discussed.}, language = {en} } @article{MenzelMarxPuhlmannetal.2019, author = {Menzel, Ralf and Marx, Robert and Puhlmann, Dirk and Heuer, Axel and Schleich, Wolfgang}, title = {The photon}, series = {Journal of the Optical Society of America : B, Optical physics}, volume = {36}, journal = {Journal of the Optical Society of America : B, Optical physics}, number = {6}, publisher = {Optical Society of America}, address = {Washington}, issn = {0740-3224}, doi = {10.1364/JOSAB.36.001668}, pages = {1668 -- 1675}, year = {2019}, abstract = {We investigate the role of the spatial mode function in a single-photon experiment designed to demonstrate the principle of complementarity. Our approach employs entangled photons created by spontaneous parametric downconversion from a pump mode in a TEM01 mode together with a double slit. Measuring the interference of the signal photons behind the double slit in coincidence with the entangled idler photons at different positions, we select signal photons of different mode functions. When the signal photons belong to the TEM01-like double-hump mode, we obtain almost perfect visibility of the interference fringes, and no "which slit" information is available in the idler photon detected before the slits. This result is remarkable because the entangled signal and idler photon pairs are created each time in only one of the two intensity humps. However, when we break the symmetry between the two maxima of the signal photon mode structure, the paths through the slits for these additional photons become distinguishable and the visibility vanishes. It is the mode function of the photons selected by the detection system that decides if interference or "which slit" information is accessible in the experiment.}, language = {en} } @article{Goychuk2019, author = {Goychuk, Igor}, title = {Fractional electron transfer kinetics and a quantum breaking of ergodicity}, series = {Physical review : E, Statistical, nonlinear and soft matter physics}, volume = {99}, journal = {Physical review : E, Statistical, nonlinear and soft matter physics}, number = {5}, publisher = {American Physical Society}, address = {College Park}, issn = {2470-0045}, doi = {10.1103/PhysRevE.99.052136}, pages = {21}, year = {2019}, abstract = {The dissipative curve-crossing problem provides a paradigm for electron-transfer (ET) processes in condensed media. It establishes the simplest conceptual test bed to study the influence of the medium's dynamics on ET kinetics both on the ensemble level, and on the level of single particles. Single electron description is particularly important for nanoscaled systems like proteins, or molecular wires. Especially insightful is this framework in the semiclassical limit, where the environment can be treated classically, and an exact analytical treatment becomes feasible. Slow medium's dynamics is capable of enslaving ET and bringing it on the ensemble level from a quantum regime of nonadiabatic tunneling to the classical adiabatic regime, where electrons follow the nuclei rearrangements. This classical adiabatic textbook picture contradicts, however, in a very spectacular fashion to the statistics of single electron transitions, even in the Debye, memoryless media, also named Ohmic in the parlance of the famed spin-boson model. On the single particle level, ET always remains quantum, and this was named a quantum breaking of ergodicity in the adiabatic ET regime. What happens in the case of subdiffusive, fractional, or sub-Ohmic medium's dynamics, which is featured by power-law decaying dynamical memory effects typical, e.g., for protein macromolecules, and other viscoelastic media? Such a memory is vividly manifested by anomalous Cole-Cole dielectric response in such media. We address this question based both on accurate numerics and analytical theory. The ensemble theory remarkably agrees with the numerical dynamics of electronic populations, revealing a power-law relaxation tail even in a profoundly nonadiabatic electron transfer regime. In other words, ET in such media should typically display fractional kinetics. However, a profound difference with the numerically accurate results occurs for the distribution of residence times in the electronic states, both on the ensemble level and the level of single trajectories. Ergodicity is broken dynamically even in a more spectacular way than in the memoryless case. Our results question the applicability of all the existing and widely accepted ensemble theories of electron transfer in fractional, sub-Ohmic environments, on the level of single molecules, and provide a real challenge to face, both for theorists and experimentalists.}, language = {en} } @article{PadashChechkinDybiecetal.2019, author = {Padash, Amin and Chechkin, Aleksei V. and Dybiec, Bartlomiej and Pavlyukevich, Ilya and Shokri, Babak and Metzler, Ralf}, title = {First-passage properties of asymmetric Levy flights}, series = {Journal of physics : A, Mathematical and theoretical}, volume = {52}, journal = {Journal of physics : A, Mathematical and theoretical}, number = {45}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1751-8113}, doi = {10.1088/1751-8121/ab493e}, pages = {48}, year = {2019}, abstract = {L{\´e}vy flights are paradigmatic generalised random walk processes, in which the independent stationary increments—the 'jump lengths'—are drawn from an -stable jump length distribution with long-tailed, power-law asymptote. As a result, the variance of L{\´e}vy flights diverges and the trajectory is characterised by occasional extremely long jumps. Such long jumps significantly decrease the probability to revisit previous points of visitation, rendering L{\´e}vy flights efficient search processes in one and two dimensions. To further quantify their precise property as random search strategies we here study the first-passage time properties of L{\´e}vy flights in one-dimensional semi-infinite and bounded domains for symmetric and asymmetric jump length distributions. To obtain the full probability density function of first-passage times for these cases we employ two complementary methods. One approach is based on the space-fractional diffusion equation for the probability density function, from which the survival probability is obtained for different values of the stable index and the skewness (asymmetry) parameter . The other approach is based on the stochastic Langevin equation with -stable driving noise. Both methods have their advantages and disadvantages for explicit calculations and numerical evaluation, and the complementary approach involving both methods will be profitable for concrete applications. We also make use of the Skorokhod theorem for processes with independent increments and demonstrate that the numerical results are in good agreement with the analytical expressions for the probability density function of the first-passage times.}, language = {en} } @article{HaeneBruehwilerEckeretal.2019, author = {Haene, Janick and Bruehwiler, Dominik and Ecker, Achim and Hass, Roland}, title = {Real-time inline monitoring of zeolite synthesis by Photon Density Wave spectroscopy}, series = {Microporous and mesoporous materials : zeolites, clays, carbons and related materials}, volume = {288}, journal = {Microporous and mesoporous materials : zeolites, clays, carbons and related materials}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1387-1811}, doi = {10.1016/j.micromeso.2019.109580}, pages = {6}, year = {2019}, abstract = {The formation process of zeolite A (Linde Type A) was monitored inline at 1.5 L scale by Photon Density Wave (PDW) spectroscopy as novel process analytical technology for highly turbid liquid suspensions. As a result, the reduced scattering coefficient, being a measure for particle number, size, and morphology, provides distinct process information, including the formation of amorphous particles and their transfer into crystalline zeolite structures. The onset and end of the crystallization process can be detected inline and in real-time. Analyses by powder X-ray diffraction and electron microscopy, based on a sampling approach, support the interpretation of the results obtained by PDW spectroscopy. In addition, the influence of the molar water content was investigated, indicating a linear increase of the time needed to reach the end of the zeolite A crystallization with increasing molar water content. Further experiments indicate a strong influence of the silica source on the course of the crystallization. The applicability of PDW spectroscopy under even more demanding chemical and physical conditions was investigated by monitoring the synthesis of zeolite L (Linde Type L).}, language = {en} } @article{Goychuk2019, author = {Goychuk, Igor}, title = {Fractional Hydrodynamic Memory and Superdiffusion in Tilted Washboard Potentials}, series = {Physical review letters}, volume = {123}, journal = {Physical review letters}, number = {18}, publisher = {American Physical Society}, address = {College Park}, issn = {0031-9007}, doi = {10.1103/PhysRevLett.123.180603}, pages = {6}, year = {2019}, abstract = {Diffusion in tilted washboard potentials can paradoxically exceed free normal diffusion. The effect becomes much stronger in the underdamped case due to inertial effects. What happens upon inclusion of usually neglected fractional hydrodynamics memory effects (Basset-Boussinesq frictional force), which result in a heavy algebraic tail of the velocity autocorrelation function of the potential-free diffusion making it transiently superdiffusive? Will a giant enhancement of diffusion become even stronger, and the transient superdiffusion last even longer? These are the questions that we answer in this Letter based on an accurate numerical investigation. We show that a resonancelike enhancement of normal diffusion becomes indeed much stronger and sharper. Moreover, a long-lasting transient regime of superdiffusion, including Richardson-like diffusion, proportional to t(3) and ballistic supertransport, proportional to t(2), is revealed.}, language = {en} } @article{VojtaSkinnerMetzler2019, author = {Vojta, Thomas and Skinner, Sarah and Metzler, Ralf}, title = {Probability density of the fractional Langevin equation with reflecting walls}, series = {Physical review : E, Statistical, nonlinear and soft matter physics}, volume = {100}, journal = {Physical review : E, Statistical, nonlinear and soft matter physics}, number = {4}, publisher = {American Physical Society}, address = {College Park}, issn = {2470-0045}, doi = {10.1103/PhysRevE.100.042142}, pages = {11}, year = {2019}, abstract = {We investigate anomalous diffusion processes governed by the fractional Langevin equation and confined to a finite or semi-infinite interval by reflecting potential barriers. As the random and damping forces in the fractional Langevin equation fulfill the appropriate fluctuation-dissipation relation, the probability density on a finite interval converges for long times towards the expected uniform distribution prescribed by thermal equilibrium. In contrast, on a semi-infinite interval with a reflecting wall at the origin, the probability density shows pronounced deviations from the Gaussian behavior observed for normal diffusion. If the correlations of the random force are persistent (positive), particles accumulate at the reflecting wall while antipersistent (negative) correlations lead to a depletion of particles near the wall. We compare and contrast these results with the strong accumulation and depletion effects recently observed for nonthermal fractional Brownian motion with reflecting walls, and we discuss broader implications.}, language = {en} } @article{GranadoAbadMetzleretal.2020, author = {Granado, Felipe Le Vot and Abad, Enrique and Metzler, Ralf and Yuste, Santos B.}, title = {Continuous time random walk in a velocity field}, series = {New Journal of Physics}, volume = {22}, journal = {New Journal of Physics}, publisher = {Dt. Physikalische Ges.}, address = {Bad Honnef}, issn = {1367-2630}, doi = {10.1088/1367-2630/ab9ae2}, pages = {27}, year = {2020}, abstract = {We consider the emerging dynamics of a separable continuous time random walk (CTRW) in the case when the random walker is biased by a velocity field in a uniformly growing domain. Concrete examples for such domains include growing biological cells or lipid vesicles, biofilms and tissues, but also macroscopic systems such as expanding aquifers during rainy periods, or the expanding Universe. The CTRW in this study can be subdiffusive, normal diffusive or superdiffusive, including the particular case of a L{\´e}vy flight. We first consider the case when the velocity field is absent. In the subdiffusive case, we reveal an interesting time dependence of the kurtosis of the particle probability density function. In particular, for a suitable parameter choice, we find that the propagator, which is fat tailed at short times, may cross over to a Gaussian-like propagator. We subsequently incorporate the effect of the velocity field and derive a bi-fractional diffusion-advection equation encoding the time evolution of the particle distribution. We apply this equation to study the mixing kinetics of two diffusing pulses, whose peaks move towards each other under the action of velocity fields acting in opposite directions. This deterministic motion of the peaks, together with the diffusive spreading of each pulse, tends to increase particle mixing, thereby counteracting the peak separation induced by the domain growth. As a result of this competition, different regimes of mixing arise. In the case of L{\´e}vy flights, apart from the non-mixing regime, one has two different mixing regimes in the long-time limit, depending on the exact parameter choice: in one of these regimes, mixing is mainly driven by diffusive spreading, while in the other mixing is controlled by the velocity fields acting on each pulse. Possible implications for encounter-controlled reactions in real systems are discussed.}, language = {en} } @article{Metzler2019, author = {Metzler, Ralf}, title = {Brownian motion and beyond: first-passage, power spectrum, non-Gaussianity, and anomalous diffusion}, series = {Journal of statistical mechanics: theory and experiment}, volume = {2019}, journal = {Journal of statistical mechanics: theory and experiment}, number = {11}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1742-5468}, doi = {10.1088/1742-5468/ab4988}, pages = {18}, year = {2019}, abstract = {Brownian motion is a ubiquitous physical phenomenon across the sciences. After its discovery by Brown and intensive study since the first half of the 20th century, many different aspects of Brownian motion and stochastic processes in general have been addressed in Statistical Physics. In particular, there now exists a very large range of applications of stochastic processes in various disciplines. Here we provide a summary of some of the recent developments in the field of stochastic processes, highlighting both the experimental findings and theoretical frameworks.}, language = {en} } @phdthesis{Velk2022, author = {Velk, Natalia}, title = {Investigation of the interaction of lysozyme with poly(l-lysine)/hyaluronic acid multilayers}, school = {Universit{\"a}t Potsdam}, pages = {85}, year = {2022}, language = {en} } @article{MardoukhiMardoukhiHokkaetal.2017, author = {Mardoukhi, Ahmad and Mardoukhi, Yousof and Hokka, Mikko and Kuokkala, Veli-Tapani}, title = {Effects of heat shock on the dynamic tensile behavior of granitic rocks}, series = {Rock mechanics and rock engineering}, volume = {50}, journal = {Rock mechanics and rock engineering}, publisher = {Springer}, address = {Wien}, issn = {0723-2632}, doi = {10.1007/s00603-017-1168-4}, pages = {1171 -- 1182}, year = {2017}, abstract = {This paper presents a new experimental method for the characterization of the surface damage caused by a heat shock on a Brazilian disk test sample. Prior to mechanical testing with a Hopkinson Split Pressure bar device, the samples were subjected to heat shock by placing a flame torch at a fixed distance from the sample's surface for periods of 10, 30, and 60 s. The sample surfaces were studied before and after the heat shock using optical microscopy and profilometry, and the images were analyzed to quantify the damage caused by the heat shock. The complexity of the surface crack patterns was quantified using fractal dimension of the crack patterns, which were used to explain the results of the mechanical testing. Even though the heat shock also causes damage below the surface which cannot be quantified from the optical images, the presented surface crack pattern analysis can give a reasonable estimate on the drop rate of the tension strength of the rock.}, language = {en} } @misc{MawassAroraSandigetal.2018, author = {Mawass, Mohamad-Assaad and Arora, Ashima and Sandig, Oliver and Luo, Chen and Unal, Ahmet A. and Radu, Florin and Valencia, Sergio and Kronast, Florian}, title = {Spatially resolved investigation of all optical magnetization switching in TbFe alloys}, series = {2018 IEEE International Magnetics Conference (INTERMAG)}, journal = {2018 IEEE International Magnetics Conference (INTERMAG)}, publisher = {IEEE}, address = {New York}, isbn = {978-1-5386-6425-4}, doi = {10.1109/INTMAG.2018.8508211}, pages = {1}, year = {2018}, abstract = {High storage density magnetic devices rely on the precise, reliable and ultrafast switching times of the magnetic states. Optical control of magnetization using femtosecond laser without applying any external magnetic field offers the advantage of switching magnetic states at ultrashort time scales, which has attracted a significant attention. Recently, it has been reported and demonstrated the,so-called, all-optical helicity-dependent switching (AO-HDS) in which a circularly polarized femtosecond laser pulse switches the magnetization of a ferromagnetic thin film as function of laser helicity [1]. Afterward, in more recent studies, it has been reported that AO-HDS is a general phenomenon existing in magnetic materials ranging from rare earth - transition metals ferrimagnetic (e.g. alloys, multilayers and hetero-structures system) to even ferromagnetic thin films. Among numerous studies in the literature which are discussing the microscopic origin of AO-HDS in ferromagnets or ferrimagnetic alloys, the most renowned concepts are momentum transfer via Inverse Faraday Effect (IFE) [1-3]and the concept of preferential thermal demagnetization for one magnetization direction by heating close to Tc (Curie temperature) in the presence of magnetic circular dichroism (MCD) [4-6]. In this study, we investigate all-optical magnetic switching using a stationary femtosecond laser spot (3-5 μm) in TbFe alloys via photoemission electron microscopy (PEEM) and x-ray magnetic circular dichroism (XMCD) with a spatial resolution of approximately 30 nm. We spatially characterize the effect of laser heating and local temperature profile created across the laser spot on AO-HDS in TbFe thin films. We find that AO-HDS occurs only in a `ring' shaped region surrounding the thermally demagnetized region formed by the laser spot and the formation of switched domains relies further on thermally induced domain wall motion. Our temperature dependent measurements highlight the importance of attainin...}, language = {en} } @article{HeydariPastorizaSantosLizMarzanetal.2017, author = {Heydari, Esmaeil and Pastoriza-Santos, Isabel and Liz-Marzan, Luis M. and Stumpe, Joachim}, title = {Nanoplasmonically-engineered random lasing in organic semiconductor thin films}, series = {Nanoscale horizons}, volume = {2}, journal = {Nanoscale horizons}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {2055-6756}, doi = {10.1039/c7nh00054e}, pages = {261 -- 266}, year = {2017}, abstract = {We demonstrate plasmonically nano-engineered coherent random lasing and stimulated emission enhancement in a hybrid gainmedium of organic semiconductors doped with core-shell plasmonic nanoparticles. The gain medium is composed of a 300 +/- 2 nm thin waveguide of an organic semiconductor, doped with 53 nm gold nanoparticle cores, isolated within silica shells. Upon loading the nanoparticles, the threshold of amplified spontaneous emission is reduced from 1.75 mu J cm(-2) x 10(2) for an undoped gain medium, to 0.35 mu J cm(-2) x 10(2) for a highly concentrated gain medium, and lasing spikes narrower than 0.1 nm are obtained. Most importantly, selection of silica shells with thicknesses of 10, 17 and 21 nm enables engineering of the plasmon-exciton energy coupling and consequently tuning of the laser slope efficiency. With this approach, the slope efficiency is increased by two times by decreasing the silica shell from 21 nm down to 10 nm, due to the enhancement of the localized electric field.}, language = {en} } @misc{RychkovStojharovKuznetsovetal.2018, author = {Rychkov, Andrey and Stojharov, Valery and Kuznetsov, Alexey and Rychkov, Dmitry}, title = {The influence of recrystallization regimes on electret charge stability in low-density polyethylene films}, series = {2018 IEEE 2nd International Conference on Dielectrics (ICD)}, journal = {2018 IEEE 2nd International Conference on Dielectrics (ICD)}, publisher = {IEEE}, address = {New York}, isbn = {978-1-5386-6389-9}, doi = {10.1109/ICD.2018.8514638}, pages = {4}, year = {2018}, abstract = {The electret state stability in nonpolar semicrystalline polymers is largely determined by the traps located at crystalline/ amorphous phase interfaces. Thus, the thermal history of such polymers should considerably influence their electret properties. In the present work, we investigate how recrystallization influences charge stability in low-density polyethylene corona electrets. It has been found that electret charge stability in quenched samples is higher than in slowly-crystallized ones. Phenomenologicaly, this can be explained by the increased number of deeper traps in samples with smaller crystallite size.}, language = {en} } @article{KretschmerCoumouAgeletal.2018, author = {Kretschmer, Marlene and Coumou, Dim and Agel, Laurie and Barlow, Mathew and Tziperman, Eli and Cohen, Judah}, title = {More-Persistent weak stratospheric polar vortex states linked to cold extremes}, series = {Bulletin of the American Meteorological Society}, volume = {99}, journal = {Bulletin of the American Meteorological Society}, number = {1}, publisher = {American Meteorological Soc.}, address = {Boston}, issn = {0003-0007}, doi = {10.1175/BAMS-D-16-0259.1}, pages = {49 -- 60}, year = {2018}, abstract = {The extratropical stratosphere in boreal winter is characterized by a strong circumpolar westerly jet, confining the coldest temperatures at high latitudes. The jet, referred to as the stratospheric polar vortex, is predominantly zonal and centered around the pole; however, it does exhibit large variability in wind speed and location. Previous studies showed that a weak stratospheric polar vortex can lead to cold-air outbreaks in the midlatitudes, but the exact relationships and mechanisms are unclear. Particularly, it is unclear whether stratospheric variability has contributed to the observed anomalous cooling trends in midlatitude Eurasia. Using hierarchical clustering, we show that over the last 37 years, the frequency of weak vortex states in mid- to late winter (January and February) has increased, which was accompanied by subsequent cold extremes in midlatitude Eurasia. For this region, 60\% of the observed cooling in the era of Arctic amplification, that is, since 1990, can be explained by the increased frequency of weak stratospheric polar vortex states, a number that increases to almost 80\% when El Nino-Southern Oscillation (ENSO) variability is included as well.}, language = {en} } @article{GoutQuadeShafietal.2017, author = {Gout, Julien and Quade, Markus and Shafi, Kamran and Niven, Robert K. and Abel, Markus}, title = {Synchronization control of oscillator networks using symbolic regression}, series = {Nonlinear Dynamics}, volume = {91}, journal = {Nonlinear Dynamics}, number = {2}, publisher = {Springer}, address = {Dordrecht}, issn = {0924-090X}, doi = {10.1007/s11071-017-3925-z}, pages = {1001 -- 1021}, year = {2017}, abstract = {Networks of coupled dynamical systems provide a powerful way to model systems with enormously complex dynamics, such as the human brain. Control of synchronization in such networked systems has far-reaching applications in many domains, including engineering and medicine. In this paper, we formulate the synchronization control in dynamical systems as an optimization problem and present a multi-objective genetic programming-based approach to infer optimal control functions that drive the system from a synchronized to a non-synchronized state and vice versa. The genetic programming-based controller allows learning optimal control functions in an interpretable symbolic form. The effectiveness of the proposed approach is demonstrated in controlling synchronization in coupled oscillator systems linked in networks of increasing order complexity, ranging from a simple coupled oscillator system to a hierarchical network of coupled oscillators. The results show that the proposed method can learn highly effective and interpretable control functions for such systems.}, language = {en} } @article{KegelesOriti2017, author = {Kegeles, Alexander and Oriti, Daniele}, title = {Continuous point symmetries in group field theories}, series = {Journal of physics : A, Mathematical and theoretical}, volume = {50}, journal = {Journal of physics : A, Mathematical and theoretical}, number = {12}, publisher = {IOP Publishing Ltd}, address = {Bristol}, issn = {1751-8113}, doi = {10.1088/1751-8121/aa5c14}, pages = {36}, year = {2017}, abstract = {We discuss the notion of symmetries in non-local field theories characterized by integro-differential equations of motion, from a geometric perspective. We then focus on group field theory (GFT) models of quantum gravity and provide a general analysis of their continuous point symmetry transformations, including the generalized conservation laws following from them.}, language = {en} } @article{SliusarenkoVitaliSposinietal.2019, author = {Sliusarenko, Oleksii Yu and Vitali, Silvia and Sposini, Vittoria and Paradisi, Paolo and Chechkin, Aleksei V. and Castellani, Gastone and Pagnini, Gianni}, title = {Finite-energy Levy-type motion through heterogeneous ensemble of Brownian particles}, series = {Journal of physics : A, Mathematical and theoretical}, volume = {52}, journal = {Journal of physics : A, Mathematical and theoretical}, number = {9}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1751-8113}, doi = {10.1088/1751-8121/aafe90}, pages = {27}, year = {2019}, abstract = {Complex systems are known to display anomalous diffusion, whose signature is a space/time scaling x similar to t(delta) with delta not equal 1/2 in the probability density function (PDF). Anomalous diffusion can emerge jointly with both Gaussian, e.g. fractional Brownian motion, and power-law decaying distributions, e.g. Levy Flights or Levy Walks (LWs). Levy flights get anomalous scaling, but, being jumps of any size allowed even at short times, have infinite position variance, infinite energy and discontinuous paths. LWs, which are based on random trapping events, overcome these limitations: they resemble a Levy-type power-law distribution that is truncated in the large displacement range and have finite moments, finite energy and, even with discontinuous velocity, they are continuous. However, LWs do not take into account the role of strong heterogeneity in many complex systems, such as biological transport in the crowded cell environment. In this work we propose and discuss a model describing a heterogeneous ensemble of Brownian particles (HEBP). Velocity of each single particle obeys a standard underdamped Langevin equation for the velocity, with linear friction term and additive Gaussian noise. Each particle is characterized by its own relaxation time and velocity diffusivity. We show that, for proper distributions of relaxation time and velocity diffusivity, the HEBP resembles some LW statistical features, in particular power-law decaying PDF, long-range correlations and anomalous diffusion, at the same time keeping finite position moments and finite energy. The main differences between the HEBP model and two different LWs are investigated, finding that, even when both velocity and position PDFs are similar, they differ in four main aspects: (i) LWs are biscaling, while HEBP is monoscaling; (ii) a transition from anomalous (delta = 1/2) to normal (delta = 1/2) diffusion in the long-time regime is seen in the HEBP and not in LWs; (iii) the power-law index of the position PDF and the space/time diffusion scaling are independent in the HEBP, while they both depend on the scaling of the interevent time PDF in LWs; (iv) at variance with LWs, our HEBP model obeys a fluctuation-dissipation theorem.}, language = {en} } @article{ChenJohnsonStrakaetal.2019, author = {Chen, Hsiao-Wen and Johnson, Sean D. and Straka, Lorrie A. and Zahedy, Fakhri S. and Schaye, Joop and Muzahid, Sowgat and Bouche, Nicolas and Cantalupo, Sebastiano and Marino, Raffaella Anna and Wendt, Martin}, title = {Characterizing circumgalactic gas around massive ellipticals at z approximate to 0.4-III.}, series = {Monthly notices of the Royal Astronomical Society}, volume = {484}, journal = {Monthly notices of the Royal Astronomical Society}, number = {1}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {0035-8711}, doi = {10.1093/mnras/sty3513}, pages = {431 -- 441}, year = {2019}, abstract = {This paper presents a study of the galactic environment of a chemically pristine (<0.6 per cent solar metallicity) Lyman Limit system (LLS) discovered along the sightline towards QSO SDSSJ 135726.27+043541.4 (Z(QSO) = 1.233) at projected distance d = 126 physical kpc (pkpc) from a luminous red galaxy (LRG) at z = 0.33. Combining deep Hubble Space Telescope images, MUSE integral field spectroscopic data, and wide-field redshift survey data has enabled an unprecedented, ultradeep view of the environment around this LRG-LLS pair. A total of 12 galaxies, including the LRG, are found at d less than or similar to 400 pkpc and line-of-sight velocity Delta v < 600 km S-1 of the LLS, with intrinsic luminosity ranging from 0.001 L-* to 2 L-* and a corresponding stellar mass range of M-star approximate to 10(7-11) M-circle dot. All 12 galaxies contribute to a total mass of M-star = 1.6 x 10(11) M-circle dot with approximate to 80 per cent contained in the LRG. The line-of-sight velocity dispersion of these galaxies is found to be sigma (group) = 230 km s(-1) with the centre of mass at d(group) = 118 pkpc and line-of-sight velocity offset of Delta v(group) = 181 km s(-1) from the LLS. Three of these are located at d less than or similar to 100 pkpc from the LLS, and they are all faint with intrinsic luminosity less than or similar to 0.02 L-* and gas-phase metallicity of approximate to 10 per cent solar in their interstellar medium. The disparity in the chemical enrichment level between the LLS and the group members suggests that the LLS originates in infalling intergalactic medium and that parts of the intergalactic gas near old and massive galaxies can still remain chemically pristine through the not too distant past.}, language = {en} } @article{GouLiuKliemetal.2019, author = {Gou, Tingyu and Liu, Rui and Kliem, Bernhard and Wang, Yuming and Veronig, Astrid M.}, title = {The birth of a coronal mass ejection}, series = {Science Advances}, volume = {5}, journal = {Science Advances}, number = {3}, publisher = {American Assoc. for the Advancement of Science}, address = {Washington}, issn = {2375-2548}, doi = {10.1126/sciadv.aau7004}, pages = {9}, year = {2019}, abstract = {The Sun's atmosphere is frequently disrupted by coronal mass ejections (CMEs), coupled with flares and energetic particles. The coupling is usually attributed to magnetic reconnection at a vertical current sheet connecting the flare and CME, with the latter embedding a helical magnetic structure known as flux rope. However, both the origin of flux ropes and their nascent paths toward eruption remain elusive. Here, we present an observation of how a stellar-sized CME bubble evolves continuously from plasmoids, mini flux ropes that are barely resolved, within half an hour. The eruption initiates when plasmoids springing from a vertical current sheet merge into a leading plasmoid, which rises at increasing speeds and expands impulsively into the CME bubble, producing hard x-ray bursts simultaneously. This observation illuminates a complete CME evolutionary path capable of accommodating a wide variety of plasma phenomena by bridging the gap between microscale and macroscale dynamics.}, language = {en} } @article{SparrePfrommerVogelsberger2018, author = {Sparre, Martin and Pfrommer, Christoph and Vogelsberger, Mark}, title = {The physics of multiphase gas flows}, series = {Monthly notices of the Royal Astronomical Society}, volume = {482}, journal = {Monthly notices of the Royal Astronomical Society}, number = {4}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {0035-8711}, doi = {10.1093/mnras/sty3063}, pages = {5401 -- 5421}, year = {2018}, abstract = {Galactic winds exhibit a multiphase structure that consists of hot-diffuse and cold-dense phases. Here we present high-resolution idealized simulations of the interaction of a hot supersonic wind with a cold cloud with the moving-mesh code AREPO in setups with and without radiative cooling. We demonstrate that cooling causes clouds with sizes larger than the cooling length to fragment in 2D and 3D simulations. We confirm earlier 2D simulations by McCourt et al. (2018) and highlight differences of the shattering processes of 3D clouds that are exposed to a hot wind. The fragmentation process is quantified with a friends-of-friends analysis of shattered cloudlets and density power spectra. Those show that radiative cooling causes the power spectral index to gradually increase when the initial cloud radius is larger than the cooling length and with increasing time until the cloud is fully dissolved in the hot wind. A resolution of around 1 pc is required to reveal the effect of cooling-induced fragmentation of a 100 pc outflowing cloud. Thus, state-of-the-art cosmological zoom simulations of the circumgalactic medium fall short by orders of magnitudes from resolving this fragmentation process. This physics is, however, necessary to reliably model observed column densities and covering fractions of Lyman alpha haloes, high-velocity clouds, and broad-line regions of active galactic nuclei.}, language = {en} } @article{NagelFreyGerhardtetal.2019, author = {Nagel, Oliver and Frey, Manuel and Gerhardt, Matthias and Beta, Carsten}, title = {Harnessing Motile Amoeboid Cells as Trucks for Microtransport and -Assembly}, series = {Advanced science}, volume = {6}, journal = {Advanced science}, number = {3}, publisher = {Wiley}, address = {Hoboken}, issn = {2198-3844}, doi = {10.1002/advs.201801242}, pages = {7}, year = {2019}, abstract = {Cell-driven microtransport is one of the most prominent applications in the emerging field of biohybrid systems. While bacterial cells have been successfully employed to drive the swimming motion of micrometer-sized cargo particles, the transport capacities of motile adherent cells remain largely unexplored. Here, it is demonstrated that motile amoeboid cells can act as efficient and versatile trucks to transport microcargo. When incubated together with microparticles, cells of the social amoeba Dictyostelium discoideum readily pick up and move the cargo particles. Relying on the unspecific adhesive properties of the amoeba, a wide range of different cargo materials can be used. The cell-driven transport can be directionally guided based on the chemotactic responses of amoeba to chemoattractant gradients. On the one hand, the cargo can be assembled into clusters in a self-organized fashion, relying on the developmentally induced chemotactic aggregation of cells. On the other hand, chemoattractant gradients can be externally imposed to guide the cellular microtrucks to a desired location. Finally, larger cargo particles of different shapes that exceed the size of a single cell by more than an order of magnitude, can also be transported by the collective effort of large numbers of motile cells.}, language = {en} } @article{CherstvyThapaWagneretal.2019, author = {Cherstvy, Andrey G. and Thapa, Samudrajit and Wagner, Caroline E. and Metzler, Ralf}, title = {Non-Gaussian, non-ergodic, and non-Fickian diffusion of tracers in mucin hydrogels}, series = {Soft matter}, volume = {15}, journal = {Soft matter}, number = {12}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1744-683X}, doi = {10.1039/c8sm02096e}, pages = {2526 -- 2551}, year = {2019}, abstract = {Native mucus is polymer-based soft-matter material of paramount biological importance. How non-Gaussian and non-ergodic is the diffusive spreading of pathogens in mucus? We study the passive, thermally driven motion of micron-sized tracers in hydrogels of mucins, the main polymeric component of mucus. We report the results of the Bayesian analysis for ranking several diffusion models for a set of tracer trajectories [C. E. Wagner et al., Biomacromolecules, 2017, 18, 3654]. The models with "diffusing diffusivity', fractional and standard Brownian motion are used. The likelihood functions and evidences of each model are computed, ranking the significance of each model for individual traces. We find that viscoelastic anomalous diffusion is often most probable, followed by Brownian motion, while the model with a diffusing diffusion coefficient is only realised rarely. Our analysis also clarifies the distribution of time-averaged displacements, correlations of scaling exponents and diffusion coefficients, and the degree of non-Gaussianity of displacements at varying pH levels. Weak ergodicity breaking is also quantified. We conclude that-consistent with the original study-diffusion of tracers in the mucin gels is most non-Gaussian and non-ergodic at low pH that corresponds to the most heterogeneous networks. Using the Bayesian approach with the nested-sampling algorithm, together with the quantitative analysis of multiple statistical measures, we report new insights into possible physical mechanisms of diffusion in mucin gels.}, language = {en} } @article{GuliakovaGorokhovatskyGalikhanovetal.2019, author = {Guliakova, A. A. and Gorokhovatsky, Yu. A. and Galikhanov, M. F. and Fr{\"u}bing, Peter}, title = {Thermoactivational spectroscopy of the high impact polystyrene based composite films}, series = {St. Petersburg Polytechnic University Journal : Physics and Mathematics}, volume = {12}, journal = {St. Petersburg Polytechnic University Journal : Physics and Mathematics}, number = {4}, publisher = {Elsevier}, address = {Amsterdam}, issn = {2405-7223}, doi = {10.18721/JPM.12401}, pages = {9 -- 16}, year = {2019}, abstract = {The relaxation processes in the high impact polystyrene (HIPS) films filled with 2, 4, 6 vol.\% of titanium dioxide (TiO2) of the rutile modification have been studied using the thermally stimulated depolarization current (TSDC) technique. Three relaxation processes were observed in the composite HIPS films. The first one (a-relaxation peak) appeared at about 93 degrees C and represented the glass transition. The second peak p was a high-temperature part of the first one and overlapped it. The p peak was caused by the release and subsequent motion of excess charges deposited during the electret preparation or the polarization process. The third peak appeared at about 150 degrees C and occurred only in the spectra of the composite films. The overlapping peaks were separated by the thermal cleaning technique. The subsequent application of the numerical methods (the Tikhonov regularization technique) allowed to determine the activation energy of the second process and to compare the obtained value with the corresponding data on the dielectric relaxation.}, language = {ru} } @misc{Rastogi2019, author = {Rastogi, Abhishake}, title = {Tikhonov regularization with oversmoothing penalty for linear statistical inverse learning problems}, series = {AIP Conference Proceedings : third international Conference of mathematical sciences (ICMS 2019)}, volume = {2183}, journal = {AIP Conference Proceedings : third international Conference of mathematical sciences (ICMS 2019)}, publisher = {American Institute of Physics}, address = {Melville}, isbn = {978-0-7354-1930-8}, issn = {0094-243X}, doi = {10.1063/1.5136221}, pages = {4}, year = {2019}, abstract = {In this paper, we consider the linear ill-posed inverse problem with noisy data in the statistical learning setting. The Tikhonov regularization scheme in Hilbert scales is considered in the reproducing kernel Hilbert space framework to reconstruct the estimator from the random noisy data. We discuss the rates of convergence for the regularized solution under the prior assumptions and link condition. For regression functions with smoothness given in terms of source conditions the error bound can explicitly be established.}, language = {en} } @misc{StichBeta2019, author = {Stich, Michael and Beta, Carsten}, title = {Time-Delay Feedback Control of an Oscillatory Medium}, series = {Biological Systems: Nonlinear Dynamics Approach}, volume = {20}, journal = {Biological Systems: Nonlinear Dynamics Approach}, publisher = {Springer}, address = {Cham}, isbn = {978-3-030-16585-7}, issn = {2199-3041}, doi = {10.1007/978-3-030-16585-7_1}, pages = {1 -- 17}, year = {2019}, abstract = {The supercritical Hopf bifurcation is one of the simplest ways in which a stationary state of a nonlinear system can undergo a transition to stable self-sustained oscillations. At the bifurcation point, a small-amplitude limit cycle is born, which already at onset displays a finite frequency. If we consider a reaction-diffusion system that undergoes a supercritical Hopf bifurcation, its dynamics is described by the complex Ginzburg-Landau equation (CGLE). Here, we study such a system in the parameter regime where the CGLE shows spatio-temporal chaos. We review a type of time-delay feedback methods which is suitable to suppress chaos and replace it by other spatio-temporal solutions such as uniform oscillations, plane waves, standing waves, and the stationary state.}, language = {en} } @misc{SpahnSachseSeissetal.2019, author = {Spahn, Frank and Sachse, Manuel and Seiss, Martin and Hsu, Hsiang-Wen and Kempf, Sascha and Horanyi, Mihaly}, title = {Circumplanetary Dust Populations}, series = {Space science reviews}, volume = {215}, journal = {Space science reviews}, number = {1}, publisher = {Springer}, address = {Dordrecht}, issn = {0038-6308}, doi = {10.1007/s11214-018-0577-3}, pages = {54}, year = {2019}, abstract = {We summarize the current state of observations of circumplanetary dust populations, including both dilute and dense rings and tori around the giant planets, ejecta clouds engulfing airless moons, and rings around smaller planetary bodies throughout the Solar System. We also discuss the theoretical models that enable these observations to be understood in terms of the sources, sinks and transport of various dust populations. The dynamics and resulting transport of the particles can be quite complex, due to the fact that their motion is influenced by neutral and plasma drag, radiation pressure, and electromagnetic forcesall in addition to gravity. The relative importance of these forces depends on the environment, as well as the makeup and size of the particles. Possible dust sources include the generation of ejecta particles by impacts, active volcanoes and geysers, and the capture of exogenous particles. Possible dust sinks include collisions with moons, rings, or the central planet, erosion due to sublimation and sputtering, even ejection and escape from the circumplanetary environment.}, language = {en} } @article{KrapfLukatMarinarietal.2019, author = {Krapf, Diego and Lukat, Nils and Marinari, Enzo and Metzler, Ralf and Oshanin, Gleb and Selhuber-Unkel, Christine and Squarcini, Alessio and Stadler, Lorenz and Weiss, Matthias and Xu, Xinran}, title = {Spectral Content of a Single Non-Brownian Trajectory}, series = {Physical review : X, Expanding access}, volume = {9}, journal = {Physical review : X, Expanding access}, number = {1}, publisher = {American Physical Society}, address = {College Park}, issn = {2160-3308}, doi = {10.1103/PhysRevX.9.011019}, pages = {13}, year = {2019}, abstract = {Time-dependent processes are often analyzed using the power spectral density (PSD) calculated by taking an appropriate Fourier transform of individual trajectories and finding the associated ensemble average. Frequently, the available experimental datasets are too small for such ensemble averages, and hence, it is of a great conceptual and practical importance to understand to which extent relevant information can be gained from S(f, T), the PSD of a single trajectory. Here we focus on the behavior of this random, realization-dependent variable parametrized by frequency f and observation time T, for a broad family of anomalous diffusions-fractional Brownian motion with Hurst index H-and derive exactly its probability density function. We show that S(f, T) is proportional-up to a random numerical factor whose universal distribution we determine-to the ensemble-averaged PSD. For subdiffusion (H < 1/2), we find that S(f, T) similar to A/f(2H+1) with random amplitude A. In sharp contrast, for superdiffusion (H > 1/2) S(f, T) similar to BT2H-1/f(2) with random amplitude B. Remarkably, for H > 1/2 the PSD exhibits the same frequency dependence as Brownian motion, a deceptive property that may lead to false conclusions when interpreting experimental data. Notably, for H > 1/2 the PSD is ageing and is dependent on T. Our predictions for both sub-and superdiffusion are confirmed by experiments in live cells and in agarose hydrogels and by extensive simulations.}, language = {en} } @article{SemenyshynHentschelStanglmairetal.2018, author = {Semenyshyn, Rostyslav and Hentschel, Mario and Stanglmair, Christoph and Teutsch, Tanja and Tarin, Cristina and Pacholski, Claudia and Giessen, Harald and Neubrech, Frank}, title = {In vitro monitoring conformational changes of polypeptide monolayers using infrared plasmonic nanoantennas}, series = {Nano letters : a journal dedicated to nanoscience and nanotechnology}, volume = {19}, journal = {Nano letters : a journal dedicated to nanoscience and nanotechnology}, number = {1}, publisher = {American Chemical Society}, address = {Washington}, issn = {1530-6984}, doi = {10.1021/acs.nanolett.8b02372}, pages = {1 -- 7}, year = {2018}, abstract = {Proteins and peptides play a predominant role in biochemical reactions of living cells. In these complex environments, not only the constitution of the molecules but also their three-dimensional configuration defines their functionality. This so-called secondary structure of proteins is crucial for understanding their function in living matter. Misfolding, for example, is suspected as the cause of neurodegenerative diseases such as Alzheimer's and Parkinson's disease. Ultimately, it is necessary to study a single protein and its folding dynamics. Here, we report a first step in this direction, namely ultrasensitive detection and discrimination of in vitro polypeptide folding and unfolding processes using resonant plasmonic nanoantennas for surface-enhanced vibrational spectroscopy. We utilize poly-l-lysine as a model system which has been functionalized on the gold surface. By in vitro infrared spectroscopy of a single molecular monolayer at the amide I vibrations we directly monitor the reversible conformational changes between α-helix and β-sheet states induced by controlled external chemical stimuli. Our scheme in combination with advanced positioning of the peptides and proteins and more brilliant light sources is highly promising for ultrasensitive in vitro studies down to the single protein level.}, language = {en} } @article{HintonOngTorres2019, author = {Hinton, James Anthony and Ong, R. A. and Torres, D.}, title = {Introduction to CTA Science}, series = {Science with the Cherenkov Telescope Array}, journal = {Science with the Cherenkov Telescope Array}, publisher = {World Scientific}, address = {New Jersey}, isbn = {978-981-327-008-4}, doi = {10.1142/9789813270091_0001}, pages = {1 -- 25}, year = {2019}, abstract = {Ground-based gamma-ray astronomy is a young field with enormous scientific potential. The possibility of astrophysical measurements at teraelectronvolt (TeV) energies was demonstrated in 1989 with the detection of a clear signal from the Crab nebula above 1 TeV with the Whipple 10 m imaging atmospheric Cherenkov telescope (IACT). Since then, the instrumentation for, and techniques of, astronomy with IACTs have evolved to the extent that a flourishing new scientific discipline has been established, with the detection of more than 150 sources and a major impact in astrophysics and more widely in physics. The current major arrays of IACTs, H.E.S.S., MAGIC, and VERITAS, have demonstrated the huge physics potential at these energies as well as the maturity of the detection technique. Many astrophysical source classes have been established, some with many well-studied individual objects, but there are indications that the known sources represent the tip of the iceberg in terms of both individual objects and source classes. The Cherenkov Telescope Array (CTA) will transform our understanding of the high-energy universe and will explore questions in physics of fundamental importance. As a key member of the suite of new and upcoming major astroparticle physics experiments and observatories, CTA will exploit synergies with gravitational wave and neutrino observatories as well as with classical photon observatories. CTA will address a wide range of major questions in and beyond astrophysics, which can be grouped into three broad themes…}, language = {en} } @article{SteppaHolch2019, author = {Steppa, Constantin Beverly and Holch, Tim Lukas}, title = {HexagDLy-Processing hexagonally sampled data with CNNs in PyTorch}, series = {SoftwareX}, volume = {9}, journal = {SoftwareX}, publisher = {Elsevier}, address = {Amsterdam}, issn = {2352-7110}, doi = {10.1016/j.softx.2019.02.010}, pages = {193 -- 198}, year = {2019}, abstract = {HexagDLy is a Python-library extending the PyTorch deep learning framework with convolution and pooling operations on hexagonal grids. It aims to ease the access to convolutional neural networks for applications that rely on hexagonally sampled data as, for example, commonly found in ground-based astroparticle physics experiments.}, language = {en} } @article{FeudelTuckermanZaksetal.2017, author = {Feudel, Fred and Tuckerman, Laurette S. and Zaks, Michael and Hollerbach, Rainer}, title = {Hysteresis of dynamos in rotating spherical shell convection}, series = {Physical review fluids / American Physical Society}, volume = {2}, journal = {Physical review fluids / American Physical Society}, publisher = {American Physical Society}, address = {College Park}, issn = {2469-990X}, doi = {10.1103/PhysRevFluids.2.053902}, pages = {11}, year = {2017}, abstract = {Bifurcations of dynamos in rotating and buoyancy-driven spherical Rayleigh-Benard convection in an electrically conducting fluid are investigated numerically. Both nonmagnetic and magnetic solution branches comprised of rotating waves are traced by path-following techniques, and their bifurcations and interconnections for different Ekman numbers are determined. In particular, the question of whether the dynamo branches bifurcate super- or sub-critically and whether a direct link to the primary pure convective states exists is answered.}, language = {en} } @article{SelsingMalesaniGoldonietal.2019, author = {Selsing, Jonatan and Malesani, D. and Goldoni, P. and Fynbo, Johan and Kr{\"u}hler, T. and Antonelli, L. A. and Arabsalmani, M. and Bolmer, J. and Cano, Z. and Christensen, L. and Covino, S. and De Cia, A. and de Ugarte Postigo, A. and Flores, H. and Fliis, M. and Gomboc, A. and Greiner, J. and Groot, P. and Hammer, F. and Hartoog, O. E. and Heintz, K. E. and Hjorth, J. and Jakobsson, P. and Japelj, J. and Kann, D. A. and Kaper, L. and Ledoux, C. and Leloudas, G. and Levan, A. J. and Maiorano, E. and Melandri, A. and Milvang-Jensen, B. and Palazzi, E. and Palmerio, J. T. and Perley, D. A. and Pian, E. and Piranomonte, S. and Pugliese, G. and Sanchez-Ramirez, R. and Savaglio, S. and Schady, P. and Schulze, S. and Sollerman, J. and Sparre, Martin and Tagliaferri, G. and Tanvir, N. R. and Thone, C. C. and Vergani, S. D. and Vreeswijk, P. and Watson, D. and Wiersema, K. and Wijers, R. and Xu, D. and Zafar, T.}, title = {The X-shooter GRB afterglow legacy sample (XS-GRB)}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {623}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201832835}, pages = {42}, year = {2019}, abstract = {In this work we present spectra of all gamma-ray burst (GRB) afterglows that have been promptly observed with the X-shooter spectrograph until 31/03/2017. In total, we have obtained spectroscopic observations of 103 individual GRBs observed within 48 hours of the GRB trigger. Redshifts have been measured for 97 per cent of these, covering a redshift range from 0.059 to 7.84. Based on a set of observational selection criteria that minimise biases with regards to intrinsic properties of the GRBs, the follow-up effort has been focused on producing a homogeneously selected sample of 93 afterglow spectra for GRBs discovered by the Swift satellite. We here provide a public release of all the reduced spectra, including continuum estimates and telluric absorption corrections. For completeness, we also provide reductions for the 18 late-time observations of the underlying host galaxies. We provide an assessment of the degree of completeness with respect to the parent GRB population, in terms of the X-ray properties of the bursts in the sample and find that the sample presented here is representative of the full Swift sample. We have constrained the fraction of dark bursts to be <28 per cent and confirm previous results that higher optical darkness is correlated with increased X-ray absorption. For the 42 bursts for which it is possible, we have provided a measurement of the neutral hydrogen column density, increasing the total number of published HI column density measurements by similar to 33 per cent. This dataset provides a unique resource to study the ISM across cosmic time, from the local progenitor surroundings to the intervening Universe.}, language = {en} } @article{LiuWangXueetal.2019, author = {Liu, Ruo-Yu and Wang, Kai and Xue, Rui and Taylor, Andrew M. and Wang, Xiang-Yu and Li, Zhuo and Yan, Huirong}, title = {Hadronuclear interpretation of a high-energy neutrino event coincident with a blazar flare}, series = {Physical review : D, Particles, fields, gravitation, and cosmology}, volume = {99}, journal = {Physical review : D, Particles, fields, gravitation, and cosmology}, number = {6}, publisher = {American Physical Society}, address = {Melville}, issn = {2470-0010}, doi = {10.1103/PhysRevD.99.063008}, pages = {11}, year = {2019}, abstract = {Although many high-energy neutrinos detected by the IceCube telescope are believed to have an extraterrestrial origin, their astrophysical sources remain a mystery. Recently, an unprecedented discovery of a high-energy muon neutrino event coincident with a multiwavelength flare from a blazar, TXS 0506 + 056, shed some light on the origin of the neutrinos. It is usually believed that a blazar is produced by a relativistic jet launched from an accreting supermassive black hole (SMBH). Here, we show that the high-energy neutrino event can be interpreted by the inelastic hadronuclear interactions between the accelerated cosmic-ray protons in the relativistic jet and the dense gas clouds in the vicinity of the SMBH. Such a scenario only requires a moderate proton power in the jet, which could be much smaller than that required in the conventional hadronic model which instead calls upon the photomeson process. Meanwhile, the flux of the multiwavelength flare from the optical to gamma-ray band can be well explained by invoking a second radiation zone in the jet at a larger distance to the SMBH. In our model, the neutrino emission lasts a shorter time than the multiwavelength flare, so the neutrino event is not necessarily correlated with the flare, but it is probably accompanied by a spectrum hardening above a few giga-electron-volt (GeV).}, language = {en} } @article{Goychuk2019, author = {Goychuk, Igor}, title = {Perfect anomalous transport of subdiffusive cargos by molecular motors in viscoelastic cytosol}, series = {Biosystems : journal of biological and information processing sciences}, volume = {177}, journal = {Biosystems : journal of biological and information processing sciences}, publisher = {Elsevier}, address = {Oxford}, issn = {0303-2647}, doi = {10.1016/j.biosystems.2018.11.004}, pages = {56 -- 65}, year = {2019}, abstract = {Multiple experiments show that various submicron particles such as magnetosomes, RNA messengers, viruses, and even much smaller nanoparticles such as globular proteins diffuse anomalously slow in viscoelastic cytosol of living cells. Hence, their sufficiently fast directional transport by molecular motors such as kinesins is crucial for the cell operation. It has been shown recently that the traditional flashing Brownian ratchet models of molecular motors are capable to describe both normal and anomalous transport of such subdiffusing cargos by molecular motors with a very high efficiency. This work elucidates further an important role of mechanochemical coupling in such an anomalous transport. It shows a natural emergence of a perfect subdiffusive ratchet regime due to allosteric effects, where the random rotations of a "catalytic wheel" at the heart of the motor operation become perfectly synchronized with the random stepping of a heavily loaded motor, so that only one ATP molecule is consumed on average at each motor step along microtubule. However, the number of rotations made by the catalytic engine and the traveling distance both scale sublinearly in time. Nevertheless, this anomalous transport can be very fast in absolute terms.}, language = {en} } @article{ThapaLukatSelhuberUnkeletal.2019, author = {Thapa, Samudrajit and Lukat, Nils and Selhuber-Unkel, Christine and Cherstvy, Andrey G. and Metzler, Ralf}, title = {Transient superdiffusion of polydisperse vacuoles in highly motile amoeboid cells}, series = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, volume = {150}, journal = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, number = {14}, publisher = {American Institute of Physics}, address = {Melville}, issn = {0021-9606}, doi = {10.1063/1.5086269}, pages = {18}, year = {2019}, abstract = {We perform a detailed statistical analysis of diffusive trajectories of membrane-enclosed vesicles (vacuoles) in the supercrowded cytoplasm of living Acanthamoeba castellanii cells. From the vacuole traces recorded in the center-of-area frame of moving amoebae, we examine the statistics of the time-averaged mean-squared displacements of vacuoles, their generalized diffusion coefficients and anomalous scaling exponents, the ergodicity breaking parameter, the non-Gaussian features of displacement distributions of vacuoles, the displacement autocorrelation function, as well as the distributions of speeds and positions of vacuoles inside the amoeba cells. Our findings deliver novel insights into the internal dynamics of cellular structures in these infectious pathogens. Published under license by AIP Publishing.}, language = {en} } @article{MenzelHeuerMilonni2019, author = {Menzel, Ralf and Heuer, Axel and Milonni, Peter W.}, title = {Entanglement, Complementarity, and Vacuum Fields in Spontaneous Parametric Down-Conversion}, series = {Atoms}, volume = {7}, journal = {Atoms}, number = {1}, publisher = {MDPI}, address = {Basel}, issn = {2218-2004}, doi = {10.3390/atoms7010027}, pages = {14}, year = {2019}, abstract = {Using two crystals for spontaneous parametric down-conversion in a parallel setup, we observe two-photon interference with high visibility. The high visibility is consistent with complementarity and the absence of which-path information. The observations are explained as the effects of entanglement or equivalently in terms of interfering probability amplitudes and also by the calculation of a second-order field correlation function in the Heisenberg picture. The latter approach brings out explicitly the role of the vacuum fields in the down-conversion at the crystals and in the photon coincidence counting. For comparison, we show that the Hong-Ou-Mandel dip can be explained by the same approach in which the role of the vacuum signal and idler fields, as opposed to entanglement involving vacuum states, is emphasized. We discuss the fundamental limitations of a theory in which these vacuum fields are treated as classical, stochastic fields.}, language = {en} } @article{MorgnerBennemannCywińskietal.2017, author = {Morgner, Frank and Bennemann, Mark and Cywiński, Piotr J. and Kollosche, Matthias and G{\´o}rski, Krzysztof and Pietraszkiewicz, Marek and Geßner, Andr{\´e} and L{\"o}hmannsr{\"o}ben, Hans-Gerd}, title = {Elastic FRET sensors for contactless pressure measurement}, series = {RSC Advances : an international journal to further the chemical sciences}, volume = {7}, journal = {RSC Advances : an international journal to further the chemical sciences}, publisher = {RSC Publishing}, address = {Cambridge}, issn = {2046-2069}, doi = {10.1039/c7ra06379b}, pages = {50578 -- 50583}, year = {2017}, abstract = {Contactless pressure monitoring based on Forster resonance energy transfer between donor/acceptor pairs immobilized within elastomers is demonstrated. The donor/acceptor energy transfer is employed by dispersing terbium(III) tris[(2-hydroxybenzoyl)-2-aminoethyl] amine complex (LLC, donor) and CdSe/ZnS quantum dots (QD655, acceptor) in styrene-ethylene/buthylene-styrene (SEBS) and poly(dimethylsiloxane) (PDMS). The continuous monitoring of QD luminescence showed a reversible intensity change as the pressure signal is alternated between two stable states indicating a pressure sensitivity of 6350 cps kPa(-1). Time-resolved measurements show the pressure impact on the FRET signal due to an increase of decay time (270 ms up to 420 ms) for the donor signal and parallel drop of decay time (170 mu s to 155 mu s) for the acceptor signal as the net pressure applied. The LLC/QD655 sensors enable a contactless readout as well as space resolved monitoring to enable miniaturization towards smaller integrated stretchable opto-electronics. Elastic FRET sensors can potentially lead to developing profitable analysis systems capable to outdo conventional wired electronic systems (inductive, capacitive, ultrasonic and photoelectric sensors) especially for point-of-care diagnostics, biological monitoring required for wearable electronics.}, language = {en} } @article{TeichmannLewandowskiAlemani2022, author = {Teichmann, Erik and Lewandowski, Heather J. and Alemani, Micol}, title = {Investigating students' views of experimental physics in German laboratory classes}, series = {Physical Review Physics Education Research}, volume = {18}, journal = {Physical Review Physics Education Research}, edition = {1}, publisher = {APS}, address = {College Park, Maryland, United States}, issn = {1554-9178}, doi = {10.1103/PhysRevPhysEducRes.18.010135}, pages = {010135-1 -- 010135-17}, year = {2022}, abstract = {There is a large variety of goals instructors have for laboratory courses, with different courses focusing on different subsets of goals. An often implicit, but crucial, goal is to develop students' attitudes, views, and expectations about experimental physics to align with practicing experimental physicists. The assessment of laboratory courses upon this one dimension of learning has been intensively studied in U.S. institutions using the Colorado Learning Attitudes about Science Survey for Experimental Physics (E-CLASS). However, there is no such an instrument available to use in Germany, and the influence of laboratory courses on students views about the nature of experimental physics is still unexplored at German-speaking institutions. Motivated by the lack of an assessment tool to investigate this goal in laboratory courses at German-speaking institutions, we present a translated version of the E-CLASS adapted to the context at German-speaking institutions. We call the German version of the E-CLASS, the GE-CLASS. We describe the translation process and the creation of an automated web-based system for instructors to assess their laboratory courses. We also present first results using GE-CLASS obtained at the University of Potsdam. A first comparison between E-CLASS and GE-CLASS results shows clear differences between University of Potsdam and U.S. students' views and beliefs about experimental physics.}, language = {en} } @article{GrossmannAransonPeruani2020, author = {Großmann, Robert and Aranson, Igor S. and Peruani, Fernando}, title = {A particle-field approach bridges phase separation and collective motion in active matter}, series = {Nature Communications}, volume = {11}, journal = {Nature Communications}, number = {1}, publisher = {Nature Publishing Group}, address = {London}, issn = {2041-1723}, doi = {10.1038/s41467-020-18978-5}, pages = {12}, year = {2020}, abstract = {Whereas self-propelled hard discs undergo motility-induced phase separation, self-propelled rods exhibit a variety of nonequilibrium phenomena, including clustering, collective motion, and spatio-temporal chaos. In this work, we present a theoretical framework representing active particles by continuum fields. This concept combines the simplicity of alignment-based models, enabling analytical studies, and realistic models that incorporate the shape of self-propelled objects explicitly. By varying particle shape from circular to ellipsoidal, we show how nonequilibrium stresses acting among self-propelled rods destabilize motility-induced phase separation and facilitate orientational ordering, thereby connecting the realms of scalar and vectorial active matter. Though the interaction potential is strictly apolar, both, polar and nematic order may emerge and even coexist. Accordingly, the symmetry of ordered states is a dynamical property in active matter. The presented framework may represent various systems including bacterial colonies, cytoskeletal extracts, or shaken granular media. Interacting self-propelled particles exhibit phase separation or collective motion depending on particle shape. A unified theory connecting these paradigms represents a major challenge in active matter, which the authors address here by modeling active particles as continuum fields.}, language = {en} } @article{FernandezCharcharCherstvyetal.2020, author = {Fernandez, Amanda Diez and Charchar, Patrick and Cherstvy, Andrey G. and Metzler, Ralf and Finnis, Michael W.}, title = {The diffusion of doxorubicin drug molecules in silica nanoslits is non-Gaussian, intermittent and anticorrelated}, series = {Physical chemistry, chemical physics}, volume = {22}, journal = {Physical chemistry, chemical physics}, number = {48}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1463-9076}, doi = {10.1039/d0cp03849k}, pages = {27955 -- 27965}, year = {2020}, abstract = {In this study we investigate, using all-atom molecular-dynamics computer simulations, the in-plane diffusion of a doxorubicin drug molecule in a thin film of water confined between two silica surfaces. We find that the molecule diffuses along the channel in the manner of a Gaussian diffusion process, but with parameters that vary according to its varying transversal position. Our analysis identifies that four Gaussians, each describing particle motion in a given transversal region, are needed to adequately describe the data. Each of these processes by itself evolves with time at a rate slower than that associated with classical Brownian motion due to a predominance of anticorrelated displacements. Long adsorption events lead to ageing, a property observed when the diffusion is intermittently hindered for periods of time with an average duration which is theoretically infinite. This study presents a simple system in which many interesting features of anomalous diffusion can be explored. It exposes the complexity of diffusion in nanoconfinement and highlights the need to develop new understanding.}, language = {en} } @article{DahlkeMaturilli2017, author = {Dahlke, Sandro and Maturilli, Marion}, title = {Contribution of atmospheric advection to the amplified winter warming in the arctic north atlantic region}, series = {Advances in meteorology}, journal = {Advances in meteorology}, publisher = {Hindawi Publ. Corp.}, address = {New York}, issn = {1687-9309}, doi = {10.1155/2017/4928620}, pages = {8}, year = {2017}, abstract = {Arctic Amplification of climate warming is caused by various feedback processes in the atmosphere-ocean-ice system and yields the strongest temperature increase during winter in the Arctic North Atlantic region. In our study, we attempt to quantify the advective contribution to the observed atmospheric warming in the Svalbard area. Based on radiosonde measurements from Ny-{\AA}lesund, a strong dependence of the tropospheric temperature on the synoptic flow direction is revealed. Using FLEXTRA backward trajectories, an increase of advection from the lower latitude Atlantic region towards Ny-{\AA}lesund is found that is attributed to a change in atmospheric circulation patterns. We find that about one-quarter (0.45 K per decade) of the observed atmospheric winter near surface warming trend in the North Atlantic region of the Arctic (2 K per decade) is due to increased advection of warm and moist air from the lower latitude Atlantic region, affecting the entire troposphere.}, language = {en} } @misc{WaldripNivenAbeletal.2017, author = {Waldrip, Steven H. and Niven, Robert K. and Abel, Markus and Schlegel, Michael}, title = {Consistent maximum entropy representations of pipe flow networks}, series = {AIP conference proceedings}, volume = {1853}, journal = {AIP conference proceedings}, number = {1}, publisher = {American Institute of Physics}, address = {Melville}, isbn = {978-0-7354-1527-0}, issn = {0094-243X}, doi = {10.1063/1.4985365}, year = {2017}, abstract = {The maximum entropy method is used to predict flows on water distribution networks. This analysis extends the water distribution network formulation of Waldrip et al. (2016) Journal of Hydraulic Engineering (ASCE), by the use of a continuous relative entropy defined on a reduced parameter set. This reduction in the parameters that the entropy is defined over ensures consistency between different representations of the same network. The performance of the proposed reduced parameter method is demonstrated with a one-loop network case study.}, language = {en} } @misc{WaldripNivenAbeletal.2017, author = {Waldrip, Steven H. and Niven, Robert K. and Abel, Markus and Schlegel, Michael}, title = {Maximum entropy analysis of transport networks}, series = {AIP conference proceedings}, volume = {1853}, journal = {AIP conference proceedings}, number = {1}, publisher = {American Institute of Physics}, address = {Melville}, isbn = {978-0-7354-1527-0}, issn = {0094-243X}, doi = {10.1063/1.4985364}, pages = {8}, year = {2017}, abstract = {The maximum entropy method is used to derive an alternative gravity model for a transport network. The proposed method builds on previous methods which assign the discrete value of a maximum entropy distribution to equal the traffic flow rate. The proposed method however, uses a distribution to represent each flow rate. The proposed method is shown to be able to handle uncertainty in a more elegant way and give similar results to traditional methods. It is able to incorporate more of the observed data through the entropy function, prior distribution and integration limits potentially allowing better inferences to be made.}, language = {en} } @article{CestnikPikovsky2022, author = {Cestnik, Rok and Pikovsky, Arkady}, title = {Hierarchy of exact low-dimensional reductions for populations of coupled oscillators}, series = {Physical review letters}, volume = {128}, journal = {Physical review letters}, number = {5}, publisher = {American Physical Society}, address = {College Park}, issn = {0031-9007}, doi = {10.1103/PhysRevLett.128.054101}, pages = {6}, year = {2022}, abstract = {We consider an ensemble of phase oscillators in the thermodynamic limit, where it is described by a kinetic equation for the phase distribution density. We propose an Ansatz for the circular moments of the distribution (Kuramoto-Daido order parameters) that allows for an exact truncation at an arbitrary number of modes. In the simplest case of one mode, the Ansatz coincides with that of Ott and Antonsen [Chaos 18, 037113 (2008)]. Dynamics on the extended manifolds facilitate higher-dimensional behavior such as chaos, which we demonstrate with a simulation of a Josephson junction array. The findings are generalized for oscillators with a Cauchy-Lorentzian distribution of natural frequencies.}, language = {en} } @misc{SposiniMetzlerOshanin2019, author = {Sposini, Vittoria and Metzler, Ralf and Oshanin, Gleb}, title = {Single-trajectory spectral analysis of scaled Brownian motion}, series = {Postprints der Universit{\"a}t Potsdam Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam Mathematisch-Naturwissenschaftliche Reihe}, number = {753}, issn = {1866-8372}, doi = {10.25932/publishup-43652}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-436522}, pages = {16}, year = {2019}, abstract = {Astandard approach to study time-dependent stochastic processes is the power spectral density (PSD), an ensemble-averaged property defined as the Fourier transform of the autocorrelation function of the process in the asymptotic limit of long observation times, T → ∞. In many experimental situations one is able to garner only relatively few stochastic time series of finite T, such that practically neither an ensemble average nor the asymptotic limit T → ∞ can be achieved. To accommodate for a meaningful analysis of such finite-length data we here develop the framework of single-trajectory spectral analysis for one of the standard models of anomalous diffusion, scaled Brownian motion.Wedemonstrate that the frequency dependence of the single-trajectory PSD is exactly the same as for standard Brownian motion, which may lead one to the erroneous conclusion that the observed motion is normal-diffusive. However, a distinctive feature is shown to be provided by the explicit dependence on the measurement time T, and this ageing phenomenon can be used to deduce the anomalous diffusion exponent.Wealso compare our results to the single-trajectory PSD behaviour of another standard anomalous diffusion process, fractional Brownian motion, and work out the commonalities and differences. Our results represent an important step in establishing singletrajectory PSDs as an alternative (or complement) to analyses based on the time-averaged mean squared displacement.}, language = {en} } @misc{GuggenbergerPagniniVojtaetal.2019, author = {Guggenberger, Tobias and Pagnini, Gianni and Vojta, Thomas and Metzler, Ralf}, title = {Fractional Brownian motion in a finite interval}, series = {Postprints der Universit{\"a}t Potsdam Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam Mathematisch-Naturwissenschaftliche Reihe}, number = {755}, issn = {1866-8372}, doi = {10.25932/publishup-43666}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-436665}, pages = {13}, year = {2019}, abstract = {Fractional Brownian motion (FBM) is a Gaussian stochastic process with stationary, long-time correlated increments and is frequently used to model anomalous diffusion processes. We study numerically FBM confined to a finite interval with reflecting boundary conditions. The probability density function of this reflected FBM at long times converges to a stationary distribution showing distinct deviations from the fully flat distribution of amplitude 1/L in an interval of length L found for reflected normal Brownian motion. While for superdiffusion, corresponding to a mean squared displacement (MSD) 〈X² (t)〉 ⋍ tᵅ with 1 < α < 2, the probability density function is lowered in the centre of the interval and rises towards the boundaries, for subdiffusion (0 < α < 1) this behaviour is reversed and the particle density is depleted close to the boundaries. The MSD in these cases at long times converges to a stationary value, which is, remarkably, monotonically increasing with the anomalous diffusion exponent α. Our a priori surprising results may have interesting consequences for the application of FBM for processes such as molecule or tracer diffusion in the confines of living biological cells or organelles, or other viscoelastic environments such as dense liquids in microfluidic chambers.}, language = {en} } @misc{ŚlęzakBurneckiMetzler2019, author = {Ślęzak, Jakub and Burnecki, Krzysztof and Metzler, Ralf}, title = {Random coefficient autoregressive processes describe Brownian yet non-Gaussian diffusion in heterogeneous systems}, series = {Postprints der Universit{\"a}t Potsdam Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam Mathematisch-Naturwissenschaftliche Reihe}, number = {765}, issn = {1866-8372}, doi = {10.25932/publishup-43792}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-437923}, pages = {18}, year = {2019}, abstract = {Many studies on biological and soft matter systems report the joint presence of a linear mean-squared displacement and a non-Gaussian probability density exhibiting, for instance, exponential or stretched-Gaussian tails. This phenomenon is ascribed to the heterogeneity of the medium and is captured by random parameter models such as 'superstatistics' or 'diffusing diffusivity'. Independently, scientists working in the area of time series analysis and statistics have studied a class of discrete-time processes with similar properties, namely, random coefficient autoregressive models. In this work we try to reconcile these two approaches and thus provide a bridge between physical stochastic processes and autoregressive models.Westart from the basic Langevin equation of motion with time-varying damping or diffusion coefficients and establish the link to random coefficient autoregressive processes. By exploring that link we gain access to efficient statistical methods which can help to identify data exhibiting Brownian yet non-Gaussian diffusion.}, language = {en} } @article{Omelʹchenko2020, author = {Omelʹchenko, Oleh E.}, title = {Nonstationary coherence-incoherence patterns in nonlocally coupled heterogeneous phase oscillators}, series = {Chaos : an interdisciplinary journal of nonlinear science}, volume = {30}, journal = {Chaos : an interdisciplinary journal of nonlinear science}, number = {4}, publisher = {American Institute of Physics}, address = {Melville}, issn = {1054-1500}, doi = {10.1063/1.5145259}, pages = {8}, year = {2020}, abstract = {We consider a large ring of nonlocally coupled phase oscillators and show that apart from stationary chimera states, this system also supports nonstationary coherence-incoherence patterns (CIPs). For identical oscillators, these CIPs behave as breathing chimera states and are found in a relatively small parameter region only. It turns out that the stability region of these states enlarges dramatically if a certain amount of spatially uniform heterogeneity (e.g., Lorentzian distribution of natural frequencies) is introduced in the system. In this case, nonstationary CIPs can be studied as stable quasiperiodic solutions of a corresponding mean-field equation, formally describing the infinite system limit. Carrying out direct numerical simulations of the mean-field equation, we find different types of nonstationary CIPs with pulsing and/or alternating chimera-like behavior. Moreover, we reveal a complex bifurcation scenario underlying the transformation of these CIPs into each other. These theoretical predictions are confirmed by numerical simulations of the original coupled oscillator system.}, language = {en} } @article{WangCherstvyChechkinetal.2020, author = {Wang, Wei and Cherstvy, Andrey G. and Chechkin, Aleksei V. and Thapa, Samudrajit and Seno, Flavio and Liu, Xianbin and Metzler, Ralf}, title = {Fractional Brownian motion with random diffusivity}, series = {Journal of physics : A, Mathematical and theoretical}, volume = {53}, journal = {Journal of physics : A, Mathematical and theoretical}, number = {47}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1751-8113}, doi = {10.1088/1751-8121/aba467}, pages = {34}, year = {2020}, abstract = {Numerous examples for a priori unexpected non-Gaussian behaviour for normal and anomalous diffusion have recently been reported in single-particle tracking experiments. Here, we address the case of non-Gaussian anomalous diffusion in terms of a random-diffusivity mechanism in the presence of power-law correlated fractional Gaussian noise. We study the ergodic properties of this model via examining the ensemble- and time-averaged mean-squared displacements as well as the ergodicity breaking parameter EB quantifying the trajectory-to-trajectory fluctuations of the latter. For long measurement times, interesting crossover behaviour is found as function of the correlation time tau characterising the diffusivity dynamics. We unveil that at short lag times the EB parameter reaches a universal plateau. The corresponding residual value of EB is shown to depend only on tau and the trajectory length. The EB parameter at long lag times, however, follows the same power-law scaling as for fractional Brownian motion. We also determine a corresponding plateau at short lag times for the discrete representation of fractional Brownian motion, absent in the continuous-time formulation. These analytical predictions are in excellent agreement with results of computer simulations of the underlying stochastic processes. Our findings can help distinguishing and categorising certain nonergodic and non-Gaussian features of particle displacements, as observed in recent single-particle tracking experiments.}, language = {en} } @article{KurilovichMantsevichStevensonetal.2020, author = {Kurilovich, Aleksandr A. and Mantsevich, Vladimir and Stevenson, Keith J. and Chechkin, Aleksei V. and Palyulin, V. V.}, title = {Complex diffusion-based kinetics of photoluminescence in semiconductor nanoplatelets}, series = {Physical chemistry, chemical physics : a journal of European Chemical Societies}, volume = {22}, journal = {Physical chemistry, chemical physics : a journal of European Chemical Societies}, number = {42}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1463-9076}, doi = {10.1039/d0cp03744c}, pages = {24686 -- 24696}, year = {2020}, abstract = {We present a diffusion-based simulation and theoretical models for explanation of the photoluminescence (PL) emission intensity in semiconductor nanoplatelets. It is shown that the shape of the PL intensity curves can be reproduced by the interplay of recombination, diffusion and trapping of excitons. The emission intensity at short times is purely exponential and is defined by recombination. At long times, it is governed by the release of excitons from surface traps and is characterized by a power-law tail. We show that the crossover from one limit to another is controlled by diffusion properties. This intermediate region exhibits a rich behaviour depending on the value of diffusivity. The proposed approach reproduces all the features of experimental curves measured for different nanoplatelet systems.}, language = {en} } @article{SteppaEgberts2020, author = {Steppa, Constantin and Egberts, Kathrin}, title = {Modelling the Galactic very-high-energy gamma-ray source population}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {643}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {0004-6361}, doi = {10.1051/0004-6361/202038172}, pages = {11}, year = {2020}, abstract = {Context. The High Energy Stereoscopic System Galactic plane survey (HGPS) is to date the most comprehensive census of Galactic gamma -ray sources at very high energies (VHE; 100 GeV <= E <= 100 TeV). As a consequence of the limited sensitivity of this survey, the 78 detected gamma -ray sources comprise only a small and biased subsample of the overall population. The larger part consists of currently unresolved sources, which contribute to large-scale diffuse emission to a still uncertain amount.Aims. We study the VHE gamma -ray source population in the Milky Way. For this purpose population-synthesis models are derived based on the distributions of source positions, extents, and luminosities.Methods. Several azimuth-symmetric and spiral-arm models are compared for spatial source distribution. The luminosity and radius function of the population are derived from the source properties of the HGPS data set and are corrected for the sensitivity bias of the HGPS. Based on these models, VHE source populations are simulated and the subsets of sources detectable according to the HGPS are compared with HGPS sources.Results. The power-law indices of luminosity and radius functions are determined to range between -1.6 and -1.9 for luminosity and -1.1 and -1.6 for radius. A two-arm spiral structure with central bar is discarded as spatial distribution of VHE sources, while azimuth-symmetric distributions and a distribution following a four-arm spiral structure without bar describe the HGPS data reasonably well. The total number of Galactic VHE sources is predicted to be in the range from 800 to 7000 with a total luminosity and flux of (1.6-6.3) x 10(36) ph s(-1) and (3-15) x 10(-10) ph cm(-2) s(-1), respectively.Conclusions. Depending on the model, the HGPS sample accounts for (68-87)\% of the emission of the population in the scanned region. This suggests that unresolved sources represent a critical component of the diffuse emission measurable in the HGPS. With the foreseen jump in sensitivity of the Cherenkov Telescope Array, the number of detectable sources is predicted to increase by a factor between 5 and 9.}, language = {en} } @article{SarabadaniMetzlerAlaNissila2022, author = {Sarabadani, Jalal and Metzler, Ralf and Ala-Nissila, Tapio}, title = {Driven polymer translocation into a channel: Isoflux tension propagation theory and Langevin dynamics simulations}, series = {Physical Review Research}, volume = {4}, journal = {Physical Review Research}, edition = {3}, publisher = {American Physical Society}, address = {College Park, Maryland, USA}, issn = {2643-1564}, doi = {10.1103/PhysRevResearch.4.033003}, pages = {033003-1 -- 033003-14}, year = {2022}, abstract = {Isoflux tension propagation (IFTP) theory and Langevin dynamics (LD) simulations are employed to study the dynamics of channel-driven polymer translocation in which a polymer translocates into a narrow channel and the monomers in the channel experience a driving force fc. In the high driving force limit, regardless of the channel width, IFTP theory predicts τ ∝ f βc for the translocation time, where β = -1 is the force scaling exponent. Moreover, LD data show that for a very narrow channel fitting only a single file of monomers, the entropic force due to the subchain inside the channel does not play a significant role in the translocation dynamics and the force exponent β = -1 regardless of the force magnitude. As the channel width increases the number of possible spatial configurations of the subchain inside the channel becomes significant and the resulting entropic force causes the force exponent to drop below unity.}, language = {en} } @article{KietheHeuerJechow2017, author = {Kiethe, Jan and Heuer, Axel and Jechow, Andreas}, title = {Second-order coherence properties of amplified spontaneous emission from a high-power tapered superluminescent diode}, series = {Laser physics letters}, volume = {14}, journal = {Laser physics letters}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1612-2011}, doi = {10.1088/1612-202X/aa772c}, pages = {4}, year = {2017}, abstract = {We study the degree of second-order coherence of the emission of a high-power multi-quantum well superluminescent diode with a lateral tapered amplifier section with and without optical feedback. When operated in an external cavity, the degree of second-order coherence changed from the almost thermal case of g((2))(0)approximate to 1.9 towards the mostly coherent case of g((2)) (0) approximate to 1.2 when the injection current at the tapered section was increased. We found good agreement with semi-classical laser theory near and below threshold while above laser threshold a slightly higher g((2))(0) was observed. As a free running device, the superluminescent diode yielded more than 400 mW of optical output power with good spatial beam quality of M-slow(2) < 1.6. In this case, the degree of second-order coherence dropped only slightly from 1.9 at low powers to 1.6 at the maximum output power. To our knowledge, this is the first investigation of a high-power tapered superluminescent diode concerning the degree of second-order coherence. Such a device might be useful for real-world applications probing the second order coherence function, such as ghost imaging.}, language = {en} } @article{SposiniKrapfMarinarietal.2022, author = {Sposini, Vittoria and Krapf, Diego and Marinari, Enzo and Sunyer, Raimon and Ritort, Felix and Taheri, Fereydoon and Selhuber-Unkel, Christine and Benelli, Rebecca and Weiss, Matthias and Metzler, Ralf and Oshanin, Gleb}, title = {Towards a robust criterion of anomalous diffusion}, series = {Communications Physics}, volume = {5}, journal = {Communications Physics}, publisher = {Springer Nature}, address = {London}, issn = {2399-3650}, doi = {10.1038/s42005-022-01079-8}, pages = {10}, year = {2022}, abstract = {Anomalous-diffusion, the departure of the spreading dynamics of diffusing particles from the traditional law of Brownian-motion, is a signature feature of a large number of complex soft-matter and biological systems. Anomalous-diffusion emerges due to a variety of physical mechanisms, e.g., trapping interactions or the viscoelasticity of the environment. However, sometimes systems dynamics are erroneously claimed to be anomalous, despite the fact that the true motion is Brownian—or vice versa. This ambiguity in establishing whether the dynamics as normal or anomalous can have far-reaching consequences, e.g., in predictions for reaction- or relaxation-laws. Demonstrating that a system exhibits normal- or anomalous-diffusion is highly desirable for a vast host of applications. Here, we present a criterion for anomalous-diffusion based on the method of power-spectral analysis of single trajectories. The robustness of this criterion is studied for trajectories of fractional-Brownian-motion, a ubiquitous stochastic process for the description of anomalous-diffusion, in the presence of two types of measurement errors. In particular, we find that our criterion is very robust for subdiffusion. Various tests on surrogate data in absence or presence of additional positional noise demonstrate the efficacy of this method in practical contexts. Finally, we provide a proof-of-concept based on diverse experiments exhibiting both normal and anomalous-diffusion.}, language = {en} } @article{KontroBuschhueter2020, author = {Kontro, Inkeri and Buschh{\"u}ter, David}, title = {Validity of Colorado Learning Attitudes about Science Survey for a high-achieving, Finnish population}, series = {Physical review. Physics education research}, volume = {16}, journal = {Physical review. Physics education research}, number = {2}, publisher = {American Physical Society}, address = {College Park, MD}, issn = {2469-9896}, doi = {10.1103/PhysRevPhysEducRes.16.020104}, pages = {11}, year = {2020}, abstract = {The Colorado Learning Attitudes about Science Survey (CLASS) is an instrument which is widely used in physics education to characterize students' attitudes toward physics and learning physics and compare them with those of experts. While CLASS has been extensively validated for use in the context of higher education institutions in the United States, there has been less information about its use with European students. We have studied the structural, content, and substantive aspects of validity of CLASS by first doing a confirmatory factor analysis of N = 642 sets of student answers from the University of Helsinki, Finland. The students represented a culturally and demographically different subset of university physics students than in previous studies. The confirmatory factor analysis used a 3-factor, 15-item factor structure as a starting point and the resulting factor structure was similar to the original. Just minor modifications were needed for fit parameters to be in the acceptable range. We explored the differences by student interviews and consultation of experts. With the exception of one item, they supported the new 14-item, 3-factor structure. The results show that the interpretations made from CLASS results are mostly transferable, and CLASS remains a useful instrument for a wide variety of populations.}, language = {en} } @phdthesis{Dziourkevitch2005, author = {Dziourkevitch, Natalia}, title = {Interstellar turbulence driven by magneto-rotational instability}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-5306}, school = {Universit{\"a}t Potsdam}, year = {2005}, abstract = {Origin and symmetry of the observed global magnetic fields in galaxies are not fully understood. We intend to clarify the question of the magnetic field origin and investigate the global action of the magneto-rotational instability (MRI) in galactic disks with the help of 3D global magneto-hydrodynamical (MHD) simulations. The calculations were done with the time-stepping ZEUS 3D code using massive parallelization. The alpha-Omega dynamo is known to be one of the most efficient mechanisms to reproduce the observed global galactic fields. The presence of strong turbulence is a pre-requisite for the alpha-Omega dynamo generation of the regular magnetic fields. The observed magnitude and spatial distribution of turbulence in galaxies present unsolved problems to theoreticians. The MRI is known to be a fast and powerful mechanism to generate MHD turbulence and to amplify magnetic fields. We find that the critical wavelength increases with the increasing of magnetic fields during the simulation, transporting the energy from critical to larger scales. The final structure, if not disrupted by supernovae explosions, is the structure of `thin layers' of thickness of about 100 pcs. An important outcome of all simulations is the magnitude of the horizontal components of the Reynolds and Maxwell stresses. The result is that the MRI-driven turbulence is magnetic-dominated: its magnetic energy exceeds the kinetic energy by a factor of 4. The Reynolds stress is small and less than 1\% of the Maxwell stress. The angular momentum transport is thus completely dominated by the magnetic field fluctuations. The volume-averaged pitch angle is always negative with a magnitude of about -30. The non-saturated MRI regime is lasting sufficiently long to fill the time between the galactic encounters, independently of strength and geometry of the initial field. Therefore, we may claim the observed pitch angles can be due to MRI action in the gaseous galactic disks. The MRI is also shown to be a very fast instability with e-folding time proportional to the time of one rotation. Steep rotation curves imply a stronger growth for the magnetic energy due to MRI. The global e-folding time is from 44 Myr to 100 Myr depending on the rotation profile. Therefore, MRI can explain the existence of rather large magnetic field in very young galaxies. We also have reproduced the observed rms values of velocities in the interstellar turbulence as it was observed in NGC 1058. We have shown with the simulations that the averaged velocity dispersion of about 5 km/s is a typical number for the MRI-driven turbulence in galaxies, which agrees with observations. The dispersion increases outside of the disk plane, whereas supernovae-driven turbulence is found to be concentrated within the disk. In our simulations the velocity dispersion increases a few times with the heights. An additional support to the dynamo alpha-effect in the galaxies is the ability of the MRI to produce a mix of quadrupole and dipole symmetries from the purely vertical seed fields, so it also solves the seed-fields problem of the galactic dynamo theory. The interaction of magneto-rotational instability and random supernovae explosions remains an open question. It would be desirable to run the simulation with the supernovae explosions included. They would disrupt the calm ring structure produced by global MRI, may be even to the level when we can no longer blame MRI to be responsible for the turbulence.}, subject = {Magnetohydrodynamik}, language = {en} } @phdthesis{Szklarski2007, author = {Szklarski, Jacek T.}, title = {Helical magnetorotational instability in MHD Taylor-Couette flow}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-16002}, school = {Universit{\"a}t Potsdam}, year = {2007}, abstract = {Magnetorotational instability (MRI) is one of the most important and most common instabilities in astrophysics. Today it is widely accepted that it serves as a major source of turbulent viscosity in accretion disks, the most energy efficient objects in the universe. The importance of the MRI for astrophysics has been realized only in recent fifteen years. However, originally it was discovered much earlier, in 1959, in a very different context. Theoretical flow of a conducting liquid confined between differentially rotating cylinders in the presence of an external magnetic field was analyzed. The central conclusion is that the additional magnetic field parallel to the axis of rotation can destabilize otherwise stable flow. Theory of non-magnetized fluid motion between rotating cylinders has much longer history, though. It has been studied already in 1888 and today such setup is usually referred as a Taylor-Couette flow. To prove experimentally the existence of MRI in a magnetized Taylor-Couette flow is a demanding task and different MHD groups around the world try to achieve it. The main problem lies in the fact that laboratory liquid metals which are used in such experiments are characterized by small magnetic Prandtl number. Consequently rotation rates of the cylinders must be extremely large and vast amount of technical problems emerge. One of the most important difficulties is an influence of plates enclosing the cylinders in any experiment. For fast rotation the plates tend to dominate the whole flow and the MRI can not be observed. In this thesis we discuss a special helical configuration of the applied magnetic field which allows the critical rotation rates to be much smaller. If only the axial magnetic field is present, the cylinders must rotate with angular velocities corresponding to Reynolds numbers of order Re ≈ 10^6. With the helical field this number is dramatically reduced to Re ≈ 10^3. The azimuthal component of the magnetic field can be easily generated by letting an electric current through the axis of rotation, In a Taylor-Couette flow the (primary) instability manifests itself as Taylor vortices. The specific geometry of the helical magnetic field leads to a traveling wave solution and the vortices are drifting in a direction determined by rotation and the magnetic field. In an idealized study for infinitely long cylinders this is not a problem. However, if the cylinders have finite length and are bounded vertically by the plates the situation is different. In this dissertation it is shown, with use of numerical methods, that the traveling wave solution also exists for MHD Taylor-Couette flow at finite aspect ratio H/D, H being height of the cylinders, D width of the gap between them. The nonlinear simulations provide amplitudes of fluid velocity which are helpful in designing an experiment. Although the plates disturb the flow, parameters like the drift velocity indicate that the helical MRI operates in this case. The idea of the helical MRI was implemented in a very recent experiment PROMISE. The results provided, for the first time, an evidence that the (helical) MRI indeed exists. Nevertheless, the influence of the vertical endplates was evident and the experiment can be, in principle, improved. Exemplary methods of reduction of the end-effect are here proposed. Near the vertical boundaries develops an Ekman-Hartmann layer. Study of this layer for the MHD Taylor-Couette system as well as its impact on the global flow properties is presented. It is shown that the plates, especially if they are conducting, can disturb the flow far more then previously thought also for relatively slow rotation rates.}, language = {en} }