@phdthesis{Mueller2008, author = {M{\"u}ller, Melanie J. I.}, title = {Bidirectional transport by molecular motors}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-18715}, school = {Universit{\"a}t Potsdam}, year = {2008}, abstract = {In biological cells, the long-range intracellular traffic is powered by molecular motors which transport various cargos along microtubule filaments. The microtubules possess an intrinsic direction, having a 'plus' and a 'minus' end. Some molecular motors such as cytoplasmic dynein walk to the minus end, while others such as conventional kinesin walk to the plus end. Cells typically have an isopolar microtubule network. This is most pronounced in neuronal axons or fungal hyphae. In these long and thin tubular protrusions, the microtubules are arranged parallel to the tube axis with the minus ends pointing to the cell body and the plus ends pointing to the tip. In such a tubular compartment, transport by only one motor type leads to 'motor traffic jams'. Kinesin-driven cargos accumulate at the tip, while dynein-driven cargos accumulate near the cell body. We identify the relevant length scales and characterize the jamming behaviour in these tube geometries by using both Monte Carlo simulations and analytical calculations. A possible solution to this jamming problem is to transport cargos with a team of plus and a team of minus motors simultaneously, so that they can travel bidirectionally, as observed in cells. The presumably simplest mechanism for such bidirectional transport is provided by a 'tug-of-war' between the two motor teams which is governed by mechanical motor interactions only. We develop a stochastic tug-of-war model and study it with numerical and analytical calculations. We find a surprisingly complex cooperative motility behaviour. We compare our results to the available experimental data, which we reproduce qualitatively and quantitatively.}, language = {en} } @phdthesis{Avila2011, author = {Avila, Gast{\´o}n}, title = {Asymptotic staticity and tensor decompositions with fast decay conditions}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-54046}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Corvino, Corvino and Schoen, Chruściel and Delay have shown the existence of a large class of asymptotically flat vacuum initial data for Einstein's field equations which are static or stationary in a neighborhood of space-like infinity, yet quite general in the interior. The proof relies on some abstract, non-constructive arguments which makes it difficult to calculate such data numerically by using similar arguments. A quasilinear elliptic system of equations is presented of which we expect that it can be used to construct vacuum initial data which are asymptotically flat, time-reflection symmetric, and asymptotic to static data up to a prescribed order at space-like infinity. A perturbation argument is used to show the existence of solutions. It is valid when the order at which the solutions approach staticity is restricted to a certain range. Difficulties appear when trying to improve this result to show the existence of solutions that are asymptotically static at higher order. The problems arise from the lack of surjectivity of a certain operator. Some tensor decompositions in asymptotically flat manifolds exhibit some of the difficulties encountered above. The Helmholtz decomposition, which plays a role in the preparation of initial data for the Maxwell equations, is discussed as a model problem. A method to circumvent the difficulties that arise when fast decay rates are required is discussed. This is done in a way that opens the possibility to perform numerical computations. The insights from the analysis of the Helmholtz decomposition are applied to the York decomposition, which is related to that part of the quasilinear system which gives rise to the difficulties. For this decomposition analogous results are obtained. It turns out, however, that in this case the presence of symmetries of the underlying metric leads to certain complications. The question, whether the results obtained so far can be used again to show by a perturbation argument the existence of vacuum initial data which approach static solutions at infinity at any given order, thus remains open. The answer requires further analysis and perhaps new methods.}, language = {en} } @phdthesis{Theves2013, author = {Theves, Matthias}, title = {Bacterial motility and growth in open and confined environments}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-70313}, school = {Universit{\"a}t Potsdam}, year = {2013}, abstract = {In the presence of a solid-liquid or liquid-air interface, bacteria can choose between a planktonic and a sessile lifestyle. Depending on environmental conditions, cells swimming in close proximity to the interface can irreversibly attach to the surface and grow into three-dimensional aggregates where the majority of cells is sessile and embedded in an extracellular polymer matrix (biofilm). We used microfluidic tools and time lapse microscopy to perform experiments with the polarly flagellated soil bacterium Pseudomonas putida (P. putida), a bacterial species that is able to form biofilms. We analyzed individual trajectories of swimming cells, both in the bulk fluid and in close proximity to a glass-liquid interface. Additionally, surface related growth during the early phase of biofilm formation was investigated. In the bulk fluid, P.putida shows a typical bacterial swimming pattern of alternating periods of persistent displacement along a line (runs) and fast reorientation events (turns) and cells swim with an average speed around 24 micrometer per second. We found that the distribution of turning angles is bimodal with a dominating peak around 180 degrees. In approximately six out of ten turning events, the cell reverses its swimming direction. In addition, our analysis revealed that upon a reversal, the cell systematically changes its swimming speed by a factor of two on average. Based on the experimentally observed values of mean runtime and rotational diffusion, we presented a model to describe the spreading of a population of cells by a run-reverse random walker with alternating speeds. We successfully recover the mean square displacement and, by an extended version of the model, also the negative dip in the directional autocorrelation function as observed in the experiments. The analytical solution of the model demonstrates that alternating speeds enhance a cells ability to explore its environment as compared to a bacterium moving at a constant intermediate speed. As compared to the bulk fluid, for cells swimming near a solid boundary we observed an increase in swimming speed at distances below d= 5 micrometer and an increase in average angular velocity at distances below d= 4 micrometer. While the average speed was maximal with an increase around 15\% at a distance of d= 3 micrometer, the angular velocity was highest in closest proximity to the boundary at d=1 micrometer with an increase around 90\% as compared to the bulk fluid. To investigate the swimming behavior in a confinement between two solid boundaries, we developed an experimental setup to acquire three-dimensional trajectories using a piezo driven objective mount coupled to a high speed camera. Results on speed and angular velocity were consistent with motility statistics in the presence of a single boundary. Additionally, an analysis of the probability density revealed that a majority of cells accumulated near the upper and lower boundaries of the microchannel. The increase in angular velocity is consistent with previous studies, where bacteria near a solid boundary were shown to swim on circular trajectories, an effect which can be attributed to a wall induced torque. The increase in speed at a distance of several times the size of the cell body, however, cannot be explained by existing theories which either consider the drag increase on cell body and flagellum near a boundary (resistive force theory) or model the swimming microorganism by a multipole expansion to account for the flow field interaction between cell and boundary. An accumulation of swimming bacteria near solid boundaries has been observed in similar experiments. Our results confirm that collisions with the surface play an important role and hydrodynamic interactions alone cannot explain the steady-state accumulation of cells near the channel walls. Furthermore, we monitored the number growth of cells in the microchannel under medium rich conditions. We observed that, after a lag time, initially isolated cells at the surface started to grow by division into colonies of increasing size, while coexisting with a comparable smaller number of swimming cells. After 5:50 hours, we observed a sudden jump in the number of swimming cells, which was accompanied by a breakup of bigger clusters on the surface. After approximately 30 minutes where planktonic cells dominated in the microchannel, individual swimming cells reattached to the surface. We interpret this process as an emigration and recolonization event. A number of complementary experiments were performed to investigate the influence of collective effects or a depletion of the growth medium on the transition. Similar to earlier observations on another bacterium from the same family we found that the release of cells to the swimming phase is most likely the result of an individual adaption process, where syntheses of proteins for flagellar motility are upregulated after a number of division cycles at the surface.}, language = {en} } @phdthesis{Prokhorov2015, author = {Prokhorov, Boris E.}, title = {High-latitude coupling processes between thermospheric circulation and solar wind driven magnetospheric currents and plasma convection}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-92353}, school = {Universit{\"a}t Potsdam}, pages = {117}, year = {2015}, abstract = {The high-latitudinal thermospheric processes driven by the solar wind and Interplanetary Magnetic Field (IMF) interaction with the Earth magnetosphere are highly variable parts of the complex dynamic plasma environment, which represent the coupled Magnetosphere - Ionosphere - Thermosphere (MIT) system. The solar wind and IMF interactions transfer energy to the MIT system via reconnection processes at the magnetopause. The Field Aligned Currents (FACs) constitute the energetic links between the magnetosphere and the Earth ionosphere. The MIT system depends on the highly variable solar wind conditions, in particular on changes of the strength and orientation of the IMF. In my thesis, I perform an investigation on the physical background of the complex MIT system using the global physical - numerical, three-dimensional, time-dependent and self-consistent Upper Atmosphere Model (UAM). This model describes the thermosphere, ionosphere, plasmasphere and inner magnetosphere as well as the electrodynamics of the coupled MIT system for the altitudinal range from 80 (60) km up to the 15 Earth radii. In the present study, I developed and investigated several variants of the high-latitudinal electrodynamic coupling by including the IMF dependence of FACs into the UAM model. For testing, the various variants were applied to simulations of the coupled MIT system for different seasons, geomagnetic activities, various solar wind and IMF conditions. Additionally, these variants of the theoretical model with the IMF dependence were compared with global empirical models. The modelling results for the most important thermospheric parameters like neutral wind and mass density were compared with satellite measurements. The variants of the UAM model with IMF dependence show a good agreement with the satellite observations. In comparison with the empirical models, the improved variants of the UAM model reproduce a more realistic meso-scale structures and dynamics of the coupled MIT system than the empirical models, in particular at high latitudes. The new configurations of the UAM model with IMF dependence contribute to the improvement of space weather prediction.}, language = {en} } @phdthesis{Breuer2016, author = {Breuer, David}, title = {The plant cytoskeleton as a transportation network}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-93583}, school = {Universit{\"a}t Potsdam}, pages = {164}, year = {2016}, abstract = {The cytoskeleton is an essential component of living cells. It is composed of different types of protein filaments that form complex, dynamically rearranging, and interconnected networks. The cytoskeleton serves a multitude of cellular functions which further depend on the cell context. In animal cells, the cytoskeleton prominently shapes the cell's mechanical properties and movement. In plant cells, in contrast, the presence of a rigid cell wall as well as their larger sizes highlight the role of the cytoskeleton in long-distance intracellular transport. As it provides the basis for cell growth and biomass production, cytoskeletal transport in plant cells is of direct environmental and economical relevance. However, while knowledge about the molecular details of the cytoskeletal transport is growing rapidly, the organizational principles that shape these processes on a whole-cell level remain elusive. This thesis is devoted to the following question: How does the complex architecture of the plant cytoskeleton relate to its transport functionality? The answer requires a systems level perspective of plant cytoskeletal structure and transport. To this end, I combined state-of-the-art confocal microscopy, quantitative digital image analysis, and mathematically powerful, intuitively accessible graph-theoretical approaches. This thesis summarizes five of my publications that shed light on the plant cytoskeleton as a transportation network: (1) I developed network-based frameworks for accurate, automated quantification of cytoskeletal structures, applicable in, e.g., genetic or chemical screens; (2) I showed that the actin cytoskeleton displays properties of efficient transport networks, hinting at its biological design principles; (3) Using multi-objective optimization, I demonstrated that different plant cell types sustain cytoskeletal networks with cell-type specific and near-optimal organization; (4) By investigating actual transport of organelles through the cell, I showed that properties of the actin cytoskeleton are predictive of organelle flow and provided quantitative evidence for a coordination of transport at a cellular level; (5) I devised a robust, optimization-based method to identify individual cytoskeletal filaments from a given network representation, allowing the investigation of single filament properties in the network context. The developed methods were made publicly available as open-source software tools. Altogether, my findings and proposed frameworks provide quantitative, system-level insights into intracellular transport in living cells. Despite my focus on the plant cytoskeleton, the established combination of experimental and theoretical approaches is readily applicable to different organisms. Despite the necessity of detailed molecular studies, only a complementary, systemic perspective, as presented here, enables both understanding of cytoskeletal function in its evolutionary context as well as its future technological control and utilization.}, language = {en} } @phdthesis{Schroeder2016, author = {Schr{\"o}der, Henning}, title = {Ultrafast electron dynamics in Fe(CO)5 and Cr(CO)6}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-94589}, school = {Universit{\"a}t Potsdam}, pages = {v, 87}, year = {2016}, abstract = {In this thesis, the two prototype catalysts Fe(CO)₅ and Cr(CO)₆ are investigated with time-resolved photoelectron spectroscopy at a high harmonic setup. In both of these metal carbonyls, a UV photon can induce the dissociation of one or more ligands of the complex. The mechanism of the dissociation has been debated over the last decades. The electronic dynamics of the first dissociation occur on the femtosecond timescale. For the experiment, an existing high harmonic setup was moved to a new location, was extended, and characterized. The modified setup can induce dynamics in gas phase samples with photon energies of 1.55eV, 3.10eV, and 4.65eV. The valence electronic structure of the samples can be probed with photon energies between 20eV and 40eV. The temporal resolution is 111fs to 262fs, depending on the combination of the two photon energies. The electronically excited intermediates of the two complexes, as well as of the reaction product Fe(CO)₄, could be observed with photoelectron spectroscopy in the gas phase for the first time. However, photoelectron spectroscopy gives access only to the final ionic states. Corresponding calculations to simulate these spectra are still in development. The peak energies and their evolution in time with respect to the initiation pump pulse have been determined, these peaks have been assigned based on literature data. The spectra of the two complexes show clear differences. The dynamics have been interpreted with the assumption that the motion of peaks in the spectra relates to the movement of the wave packet in the multidimensional energy landscape. The results largely confirm existing models for the reaction pathways. In both metal carbonyls, this pathway involves a direct excitation of the wave packet to a metal-to-ligand charge transfer state and the subsequent crossing to a dissociative ligand field state. The coupling of the electronic dynamics to the nuclear dynamics could explain the slower dissociation in Fe(CO)₅ as compared to Cr(CO)₆.}, language = {en} } @phdthesis{Schmidt2014, author = {Schmidt, Lukas}, title = {Aerosols and boundary layer structure over Arctic sea ice based on airborne lidar and dropsonde measurements}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-75076}, school = {Universit{\"a}t Potsdam}, pages = {vii, 98, xiii}, year = {2014}, abstract = {The atmosphere over the Arctic Ocean is strongly influenced by the distribution of sea ice and open water. Leads in the sea ice produce strong convective fluxes of sensible and latent heat and release aerosol particles into the atmosphere. They increase the occurrence of clouds and modify the structure and characteristics of the atmospheric boundary layer (ABL) and thereby influence the Arctic climate. In the course of this study aircraft measurements were performed over the western Arctic Ocean as part of the campaign PAMARCMIP 2012 of the Alfred Wegener Institute for Polar and Marine Research (AWI). Backscatter from aerosols and clouds within the lower troposphere and the ABL were measured with the nadir pointing Airborne Mobile Aerosol Lidar (AMALi) and dropsondes were launched to obtain profiles of meteorological variables. Furthermore, in situ measurements of aerosol properties, meteorological variables and turbulence were part of the campaign. The measurements covered a broad range of atmospheric and sea ice conditions. In this thesis, properties of the ABL over Arctic sea ice with a focus on the influence of open leads are studied based on the data from the PAMARCMIP campaign. The height of the ABL is determined by different methods that are applied to dropsonde and AMALi backscatter profiles. ABL heights are compared for different flights representing different conditions of the atmosphere and of sea ice and open water influence. The different criteria for ABL height that are applied show large variation in terms of agreement among each other, depending on the characteristics of the ABL and its history. It is shown that ABL height determination from lidar backscatter by methods commonly used under mid-latitude conditions is applicable to the Arctic ABL only under certain conditions. Aerosol or clouds within the ABL are needed as a tracer for ABL height detection from backscatter. Hence an aerosol source close to the surface is necessary, that is typically found under the present influence of open water and therefore convective conditions. However it is not always possible to distinguish residual layers from the actual ABL. Stable boundary layers are generally difficult to detect. To illustrate the complexity of the Arctic ABL and processes therein, four case studies are analyzed each of which represents a snapshot of the interplay between atmosphere and underlying sea ice or water surface. Influences of leads and open water on the aerosol and clouds within the ABL are identified and discussed. Leads are observed to cause the formation of fog and cloud layers within the ABL by humidity emission. Furthermore they decrease the stability and increase the height of the ABL and consequently facilitate entrainment of air and aerosol layers from the free troposphere.}, language = {en} } @phdthesis{Goswami2014, author = {Goswami, Bedartha}, title = {Uncertainties in climate data analysis}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-78312}, school = {Universit{\"a}t Potsdam}, year = {2014}, abstract = {Scientific inquiry requires that we formulate not only what we know, but also what we do not know and by how much. In climate data analysis, this involves an accurate specification of measured quantities and a consequent analysis that consciously propagates the measurement errors at each step. The dissertation presents a thorough analytical method to quantify errors of measurement inherent in paleoclimate data. An additional focus are the uncertainties in assessing the coupling between different factors that influence the global mean temperature (GMT). Paleoclimate studies critically rely on `proxy variables' that record climatic signals in natural archives. However, such proxy records inherently involve uncertainties in determining the age of the signal. We present a generic Bayesian approach to analytically determine the proxy record along with its associated uncertainty, resulting in a time-ordered sequence of correlated probability distributions rather than a precise time series. We further develop a recurrence based method to detect dynamical events from the proxy probability distributions. The methods are validated with synthetic examples and demonstrated with real-world proxy records. The proxy estimation step reveals the interrelations between proxy variability and uncertainty. The recurrence analysis of the East Asian Summer Monsoon during the last 9000 years confirms the well-known `dry' events at 8200 and 4400 BP, plus an additional significantly dry event at 6900 BP. We also analyze the network of dependencies surrounding GMT. We find an intricate, directed network with multiple links between the different factors at multiple time delays. We further uncover a significant feedback from the GMT to the El Ni{\~n}o Southern Oscillation at quasi-biennial timescales. The analysis highlights the need of a more nuanced formulation of influences between different climatic factors, as well as the limitations in trying to estimate such dependencies.}, language = {en} } @phdthesis{Gomez2016, author = {Gomez, David}, title = {Mechanisms of biochemical reactions within crowded environments}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-94593}, school = {Universit{\"a}t Potsdam}, pages = {vii, 112}, year = {2016}, abstract = {The cell interior is a highly packed environment in which biological macromolecules evolve and function. This crowded media has effects in many biological processes such as protein-protein binding, gene regulation, and protein folding. Thus, biochemical reactions that take place in such crowded conditions differ from diluted test tube conditions, and a considerable effort has been invested in order to understand such differences. In this work, we combine different computationally tools to disentangle the effects of molecular crowding on biochemical processes. First, we propose a lattice model to study the implications of molecular crowding on enzymatic reactions. We provide a detailed picture of how crowding affects binding and unbinding events and how the separate effects of crowding on binding equilibrium act together. Then, we implement a lattice model to study the effects of molecular crowding on facilitated diffusion. We find that obstacles on the DNA impair facilitated diffusion. However, the extent of this effect depends on how dynamic obstacles are on the DNA. For the scenario in which crowders are only present in the bulk solution, we find that at some conditions presence of crowding agents can enhance specific-DNA binding. Finally, we make use of structure-based techniques to look at the impact of the presence of crowders on the folding a protein. We find that polymeric crowders have stronger effects on protein stability than spherical crowders. The strength of this effect increases as the polymeric crowders become longer. The methods we propose here are general and can also be applied to more complicated systems.}, language = {en} } @phdthesis{Bittermann2015, author = {Bittermann, Klaus}, title = {Semi-empirical sea-level modelling}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-93881}, school = {Universit{\"a}t Potsdam}, pages = {v, 88}, year = {2015}, abstract = {Semi-empirical sea-level models (SEMs) exploit physically motivated empirical relationships between global sea level and certain drivers, in the following global mean temperature. This model class evolved as a supplement to process-based models (Rahmstorf (2007)) which were unable to fully represent all relevant processes. They thus failed to capture past sea-level change (Rahmstorf et al. (2012)) and were thought likely to underestimate future sea-level rise. Semi-empirical models were found to be a fast and useful tool for exploring the uncertainties in future sea-level rise, consistently giving significantly higher projections than process-based models. In the following different aspects of semi-empirical sea-level modelling have been studied. Models were first validated using various data sets of global sea level and temperature. SEMs were then used on the glacier contribution to sea level, and to infer past global temperature from sea-level data via inverse modelling. Periods studied encompass the instrumental period, covered by tide gauges (starting 1700 CE (Common Era) in Amsterdam) and satellites (first launched in 1992 CE), the era from 1000 BCE (before CE) to present, and the full length of the Holocene (using proxy data). Accordingly different data, model formulations and implementations have been used. It could be shown in Bittermann et al. (2013) that SEMs correctly predict 20th century sea-level when calibrated with data until 1900 CE. SEMs also turned out to give better predictions than the Intergovernmental Panel on Climate Change (IPCC) 4th assessment report (AR4, IPCC (2007)) models, for the period from 1961-2003 CE. With the first multi-proxy reconstruction of global sea-level as input, estimate of the human-induced component of modern sea-level change and projections of future sea-level rise were calculated (Kopp et al. (2016)). It turned out with 90\% confidence that more than 40 \% of the observed 20th century sea-level rise is indeed anthropogenic. With the new semi-empirical and IPCC (2013) 5th assessment report (AR5) projections the gap between SEM and process-based model projections closes, giving higher credibility to both. Combining all scenarios, from strong mitigation to business as usual, a global sea-level rise of 28-131 cm relative to 2000 CE, is projected with 90\% confidence. The decision for a low carbon pathway could halve the expected global sea-level rise by 2100 CE. Present day temperature and thus sea level are driven by the globally acting greenhouse-gas forcing. Unlike that, the Milankovich forcing, acting on Holocene timescales, results mainly in a northern-hemisphere temperature change. Therefore a semi-empirical model can be driven with northernhemisphere temperatures, which makes it possible to model the main subcomponent of sea-level change over this period. It showed that an additional positive constant rate of the order of the estimated Antarctic sea-level contribution is then required to explain the sea-level evolution over the Holocene. Thus the global sea level, following the climatic optimum, can be interpreted as the sum of a temperature induced sea-level drop and a positive long-term contribution, likely an ongoing response to deglaciation coming from Antarctica.}, language = {en} } @phdthesis{Shenar2017, author = {Shenar, Tomer}, title = {Comprehensive analyses of massive binaries and implications on stellar evolution}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-104857}, school = {Universit{\"a}t Potsdam}, pages = {187}, year = {2017}, abstract = {Via their powerful radiation, stellar winds, and supernova explosions, massive stars (Mini \& 8 M☉) bear a tremendous impact on galactic evolution. It became clear in recent decades that the majority of massive stars reside in binary systems. This thesis sets as a goal to quantify the impact of binarity (i.e., the presence of a companion star) on massive stars. For this purpose, massive binary systems in the Local Group, including OB-type binaries, high mass X-ray binaries (HMXBs), and Wolf-Rayet (WR) binaries, were investigated by means of spectral, orbital, and evolutionary analyses. The spectral analyses were performed with the non-local thermodynamic equillibrium (non-LTE) Potsdam Wolf-Rayet (PoWR) model atmosphere code. Thanks to critical updates in the calculation of the hydrostatic layers, the code became a state-of-the-art tool applicable for all types of hot massive stars (Chapter 2). The eclipsing OB-type triple system δ Ori served as an intriguing test-case for the new version of the PoWR code, and provided key insights regarding the formation of X-rays in massive stars (Chapter 3). We further analyzed two prototypical HMXBs, Vela X-1 and IGR J17544-2619, and obtained fundamental conclusions regarding the dichotomy of two basic classes of HMXBs (Chapter 4). We performed an exhaustive analysis of the binary R 145 in the Large Magellanic Cloud (LMC), which was claimed to host the most massive stars known. We were able to disentangle the spectrum of the system, and performed an orbital, polarimetric, and spectral analysis, as well as an analysis of the wind-wind collision region. The true masses of the binary components turned out to be significantly lower than suggested, impacting our understanding of the initial mass function and stellar evolution at low metallicity (Chapter 5). Finally, all known WR binaries in the Small Magellanic Cloud (SMC) were analyzed. Although it was theoretical predicted that virtually all WR stars in the SMC should be formed via mass-transfer in binaries, we find that binarity was not important for the formation of the known WR stars in the SMC, implying a strong discrepancy between theory and observations (Chapter 6).}, language = {en} } @phdthesis{FrancoGonzalez2002, author = {Franco Gonz{\´a}lez, Olga}, title = {Structural and spectroscopical study of crystals of 1,3,4-oxadiazole derivatives at high pressure}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0000572}, school = {Universit{\"a}t Potsdam}, year = {2002}, abstract = {Die Suche nach neuen Materialien von technischem Interesse hat in den letzten Jahren neue Antriebe zu der Untersuchung organischer Verbindungen gegeben. Organische Substanzen haben viele Vorteile wie z.B. die M{\"o}glichkeit, ihre Eigenschaften durch verschiedene chemische und physikalische Techniken im Herstellung-Prozess f{\"u}r ein bestimmtes Ziel zu modifizieren. Oxadiazolverbindungen sind interessant aufgrund ihrer Nutzung als Material f{\"u}r Licht emittierende Dioden und Scintillatoren. Die physikalischen Eigenschaften eines Festk{\"o}rpers h{\"a}ngen von seiner Struktur ab. Unterschiedliche Strukturen entwickeln unterschiedliche intra- und intermolek{\"u}lare Wechselwirkungen. Eine ausgezeichnete Weise, um sowohl die intra- als auch die intermolekularen Wechselwirkungen eines bestimmtes Stoffes zu beeinflussen, ohne seine chemischen Charakteristiken zu {\"a}ndern, ist die Verwendung von hohem Druck. Wir haben den Einfluss von hohem Druck und hoher Temperatur auf die super-molekulare Struktur einiger Oxadiazolverbindungen im kristallinem Zustand untersucht. Aus diesen Untersuchungsergebnissen wurde eine Zustandsgleichung f{\"u}r diese Kristalle bestimmt. {\"U}berdies wurden die spektroskopischen Eigenschaften dieser Materialien unter hohem Druck charakterisiert.}, subject = {Oxadiazolderivate ; Kristallstruktur ; Hochdruck ; UV-VIS-Spektroskopie ; Raman-Spektroskopie}, language = {en} } @phdthesis{Kuhlbrodt2002, author = {Kuhlbrodt, Till}, title = {Stability and variability of open-ocean deep convection in deterministic and stochastic simple models}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0000622}, school = {Universit{\"a}t Potsdam}, year = {2002}, abstract = {Die Tiefenkonvektion ist ein wesentlicher Bestandteil der Zirkulation im Nordatlantik. Sie beeinflusst den nordw{\"a}rtigen W{\"a}rmetransport der thermohalinen Zirkulation. Ein Verst{\"a}ndnis ihrer Stabilit{\"a}t und Variabilit{\"a}t ist daher n{\"o}tig, um Klimaver{\"a}nderungen im Bereich des Nordatlantiks einsch{\"a}tzen zu k{\"o}nnen. Diese Arbeit hat zum Ziel, das konzeptionelle Verst{\"a}ndnis der Stabilit{\"a}t und der Variabilit{\"a}t der Tiefenkonvektion zu verbessern. Beobachtungsdaten aus der Labradorsee zeigen Phasen mit und ohne Tiefenkonvektion. Ein einfaches Modell mit zwei Boxen wird an diese Daten angepasst. Das Ergebnis legt nahe, dass die Labradorsee zwei koexistierende stabile Zust{\"a}nde hat, einen mit regelm{\"a}ßiger Tiefenkonvektion und einen ohne Tiefenkonvektion. Diese Bistabilit{\"a}t ergibt sich aus einer positiven Salzgehalts-R{\"u}ckkopplung, deren Ursache ein Netto-S{\"u}ßwassereintrag in die Deckschicht ist. Der konvektive Zustand kann schnell instabil werden, wenn der mittlere Antrieb sich hin zu w{\"a}rmeren oder weniger salzhaltigen Bedingungen {\"a}ndert. Die wetterbedingte Variabilit{\"a}t des externen Antriebs wird durch die Addition eines stochastischen Antriebsterms in das Modell eingebaut. Es zeigt sich, dass dann die Tiefenkonvektion h{\"a}ufig an- und wieder ausgeschaltet wird. Die mittlere Aufenthaltszeit in beiden Zust{\"a}nden ist ein Maß ihrer stochastischen Stabilit{\"a}t. Die stochastische Stabilit{\"a}t h{\"a}ngt in glatter Weise von den Parametern des Antriebs ab, im Gegensatz zu der deterministischen (nichtstochastischen) Stabilit{\"a}t, die sich abrupt {\"a}ndern kann. Sowohl das Mittel als auch die Varianz des stochastischen Antriebs beeinflussen die H{\"a}ufigkeit von Tiefenkonvektion. Eine Abnahme der Konvektionsh{\"a}ufigkeit, als Reaktion auf eine Abnahme des Salzgehalts an der Oberfl{\"a}che, kann zum Beispiel durch eine Zunahme der Variabilit{\"a}t in den W{\"a}rmefl{\"u}ssen kompensiert werden. Mit einem weiter vereinfachten Box-Modell werden einige Eigenschaften der stochastischen Stabilit{\"a}t analytisch untersucht. Es wird ein neuer Effekt beschrieben, die wandernde Monostabilit{\"a}t: Auch wenn die Tiefenkonvektion aufgrund ge{\"a}nderter Parameter des Antriebs kein stabiler Zustand mehr ist, kann der stochastische Antrieb immer noch h{\"a}ufig Konvektionsereignisse ausl{\"o}sen. Die analytischen Gleichungen zeigen explizit, wie die wandernde Monostabilit{\"a}t sowie andere Effekte von den Modellparametern abh{\"a}ngen. Diese Abh{\"a}ngigkeit ist f{\"u}r die mittleren Aufenthaltszeiten immer exponentiell, f{\"u}r die Wahrscheinlichkeit langer nichtkonvektiver Phasen dagegen nur dann, wenn diese Wahrscheinlichkeit gering ist. Es ist zu erwarten, dass wandernde Monostabilit{\"a}t auch in anderen Teilen des Klimasystems eine Rolle spielt. Insgesamt zeigen die Ergebnisse, dass die Stabilit{\"a}t der Tiefenkonvektion in der Labradorsee sehr empfindlich auf den Antrieb reagiert. Die Rolle der Variabilit{\"a}t ist entscheidend f{\"u}r ein Verst{\"a}ndnis dieser Empfindlichkeit. Kleine {\"A}nderungen im Antrieb k{\"o}nnen bereits die H{\"a}ufigkeit von Tiefenkonvektionsereignissen deutlich mindern, was sich vermutlich stark auf das regionale Klima auswirkt.}, subject = {Labradorsee ; Thermohaline Konvektion ; Stochastisches Modell}, language = {en} } @phdthesis{Kraut2001, author = {Kraut, Suso}, title = {Multistable systems under the influence of noise}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0000424}, school = {Universit{\"a}t Potsdam}, year = {2001}, abstract = {Nichtlineare multistabile Systeme unter dem Einfluss von Rauschen weisen vielschichtige dynamische Eigenschaften auf. Ein mittleres Rauschlevel zeitigt ein Springen zwischen den metastabilen Zustaenden. Dieser "attractor-hopping" Prozess ist gekennzeichnet durch laminare Bewegung in der Naehe von Attraktoren und erratische Bewegung, die sich auf chaotischen Satteln abspielt, welche in die fraktalen Einzugsgebietsgrenzen eingebettet sind. Er hat rauschinduziertes Chaos zur Folge. Bei der Untersuchung der dissipativen Standardabbildung wurde das Phaenomen der Praeferenz von Attraktoren durch die Wirkung des Rauschens gefunden. Dies bedeutet, dass einige Attraktoren eine groessere Wahrscheinlichkeit erhalten aufzutreten, als dies fuer das rauschfreie System der Fall waere. Bei einer bestimmten Rauschstaerke ist diese Bevorzugung maximal. Andere Attraktoren werden aufgrund des Rauschens weniger oft angelaufen. Bei einer entsprechend hohen Rauschstaerke werden sie komplett ausgeloescht. Die Komplexitaet des Sprungprozesses wird fuer das Modell zweier gekoppelter logistischer Abbildungen mit symbolischer Dynamik untersucht. Bei Variation eines Parameters steigt an einem bestimmten Wert des Parameters die topologische Entropie steil an, die neben der Shannon Entropie als Komplexitaetsmass verwendet wird. Dieser Anstieg wird auf eine neuartige Bifurkation von chaotischen Satteln zurueckgefuehrt, die in einem Verschmelzen zweier Sattel besteht und durch einen "Snap-back"-Repellor vermittelt wird. Skalierungsgesetze sowohl der Verweilzeit auf einem der zuvor getrennten Teile des Sattels als auch des Wachsens der fraktalen Dimension des entstandenen Sattels beschreiben diese neuartige Bifurkation genauer. Wenn ein chaotischer Sattel eingebettet in der offenen Umgebung eines Einzugsgebietes eines metastabilen Zustandes liegt, fuehrt das zu einer deutlichen Senkung der Schwelle des rauschinduzierten Tunnelns. Dies wird anhand der Ikeda-Abbildung, die ein Lasersystem mit einer zeitverzoegerden Interferenz beschreibt, demonstriert. Dieses Resultat wird unter Verwendung der Theorie der Quasipotentiale erzielt. Sowohl dieser Effekt, die Senkung der Schwelle f{\"u}r rauschinduziertes Tunneln aus einem metastabilen Zustand durch einen chaotischen Sattel, als auch die beiden Skalierungsgesteze sind von experimenteller Relevanz.}, language = {en} } @phdthesis{Breidenich2000, author = {Breidenich, Markus}, title = {Polymers at membranes}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0000284}, school = {Universit{\"a}t Potsdam}, year = {2000}, abstract = {Die Oberfl{\"a}che biologischer Zellen besteht aus einer Lipidmembran und einer Vielzahl von Proteinen und Polymeren, die in die Membran eingebaut sind. Die Beeinflussung der Membran durch Polymere, die mit einem Ende an der Membran verankert sind, wird im Rahmen dieser Arbeit anhand eines vereinfachten biomimetischen Systems studiert. Der entropische Druck, den das Polymer durch St{\"o}ße auf die Membran aus{\"u}bt, f{\"u}hrt dazu, dass sich die Membran vom Polymer weg kr{\"u}mmt. Die resultierende Membranform ist ein Kegel in der N{\"a}he des Ankers und ein Katenoid in grossem Abstand vom Ankerpunkt. Monte Carlo-Simulationen best{\"a}tigen die perturbativ berechneten Resultate. Bei Hinzunahme eines attraktiven Potentials zwischen Polymer und Membran verringert sich die urspr{\"u}nglich vom Polymer induzierte Kr{\"u}mmung. Im Limes starker Adsorption, in welchem das Polymer ganz auf der Membranoberfl{\"a}che lokalisiert ist, verschwindet der Polymerdruck und die durch diesen induzierte Kr{\"u}mmung der Membran. Falls das Polymer nicht direkt auf der Membranoberfl{\"a}che verankert ist, sondern in endlichem Ankerabstand, biegt sich die Membran im adsorbierten Fall zum Polymer hin. Im letzten Teil der Arbeit werden nicht verankerte Polymere in L{\"o}sung betrachtet. Untersucht wird der Einfluss einer solchen Polymerl{\"o}sung auf die Kr{\"u}mmung der Membran. Im Grenzfall einer rein sterischen, repulsiven Wechselwirkung zwischen Polymeren und Membran biegt sich diese, im Gegensatz zur verankerten Situation, zur L{\"o}sung hin. Bei zunehmender Attraktion biegt sich die Membran im Limes starker Adsorption der Polymere von der L{\"o}sung weg.}, language = {en} } @phdthesis{Moreira2001, author = {Moreira, Andr{\´e} Gu{\´e}rin}, title = {Charged systems in bulk and at interfaces}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0000677}, school = {Universit{\"a}t Potsdam}, year = {2001}, abstract = {Eine der Faustregeln der Kolloid- und Oberfl{\"a}chenphysik ist, dass die meisten Oberfl{\"a}chen geladen sind, wenn sie mit einem L{\"o}sungsmittel, normalerweise Wasser, in Kontakt treten. Dies ist zum Beispiel bei ladungsstabilisierten Kolloidalen Suspensionen der Fall, bei denen die Oberfl{\"a}che der Kolloidteilchen geladen ist (gew{\"o}hnlich mit einer Ladung von mehreren Hunderttausend Elementarladungen), oder bei Monoschichten ionischer Tenside, die auf einer Luft-Wasser Grenzfl{\"a}che sitzen (wobei die wasserliebenden Kopfgruppen durch die Freisetzung von Gegenionen geladen werden), sowie bei Doppelschichten, die geladene phospholipide enthalten (wie Zellmembranen). In dieser Arbeit betrachten wir einige Modellsysteme, die zwar eine vereinfachte Fassung der Realit{\"a}t darstellen, von denen wir aber dennoch erwarten koennen, dass wir mit ihrer Hilfe einige physikalische Eigenschaften realer geladener Systeme (Kolloide und Elektrolyte) einfangen k{\"o}nnen.}, language = {en} } @phdthesis{GilMerinoRubio2003, author = {Gil-Merino Rubio, Rodrigo}, title = {Cosmology through gravitational lenses}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0001030}, school = {Universit{\"a}t Potsdam}, year = {2003}, abstract = {In dieser Dissertation nutze ich den Gravitationslinseneffekt, um eine Reihe von kosmologischen Fragen zu untersuchen. Der Laufzeitunterschied des Gravitationslinsensystems HE1104-1805 wurde mit unterschiedlichen Methoden bestimmt. Zwischen den beiden Komponenten erhalte ich einen Unterschied von Delta_t(A-B) = -310 +-20 Tagen (2 sigma Konfidenzintervall). Außerdem nutze ich eine dreij{\"a}hrige Beobachtungskampagne, um den Doppelquasar Q0957+561 zu untersuchen. Die beobachteten Fluktuationen in den Differenzlichtkurven lassen sich durch Rauschen erkl{\"a}ren, ein Mikrogravitationslinseneffekt wird zur Erkl{\"a}rung nicht ben{\"o}tigt. Am Vierfachquasar Q2237+0305 untersuchte ich den Mikrogravitationslinseneffekt anhand der Daten der GLITP-Kollaboration (Okt. 1999-Feb. 2000). Durch die Abwesenheit eines starken Mikrogravitationslinsensignals konnte ich eine obere Grenze von v=600 km/s f f{\"u}r die effektive Transversalgeschwindigkeit der Linsengalaxie bestimmen (unter der Annahme von Mikrolinsen mit 0.1 Sonnenmassen). Im zweiten Teil der Arbeit untersuchte ich die Verteilung der Dunklen Materie in Galaxienhaufen. F{\"u}r den Galaxienhaufen Cl0024+1654 erhalte ich ein Masse-Leuchtkraft-Verh{\"a}ltnis von M/L = 200 M_sun/L_sun (innerhalb eines Radius von 3 Bogenminuten). Im Galaxienhaufen RBS380 finde ich eine relativ geringe R{\"o}ntgenleuchtkraft von L =2*10^(44) erg/s, obwohl im optischen eine große Anzahl von Galaxien gefunden wurde.}, language = {en} } @phdthesis{Fuessel2003, author = {F{\"u}ssel, Hans-Martin}, title = {Impacts analysis for inverse integrated assessments of climate change}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0001089}, school = {Universit{\"a}t Potsdam}, year = {2003}, abstract = {Diese Dissertation beschreibt die Entwicklung und Anwendung des Klimawirkungsmoduls des ICLIPS-Modells, eines integrierten Modells des Klimawandels ('Integrated Assessment'-Modell). Vorangestellt ist eine Diskussion des gesellschaftspolitischen Kontexts, in dem modellbasiertes 'Integrated Assessment' stattfindet, aus der wichtige Anforderungen an die Spezifikation des Klimawirkungsmoduls abgeleitet werden. Das 'Integrated Assessment' des Klimawandels umfasst eine weiten Bereich von Aktivit{\"a}ten zur wissenschaftsbasierten Unterst{\"u}tzung klimapolitischer Entscheidungen. Hierbei wird eine Vielzahl von Ans{\"a}tzen verfolgt, um politikrelevante Informationen {\"u}ber die erwarteten Auswirkungen des Klimawandels zu ber{\"u}cksichtigen. Wichtige Herausforderungen in diesem Bereich sind die große Bandbreite der relevanten r{\"a}umlichen und zeitlichen Skalen, die multifaktorielle Verursachung vieler 'Klimafolgen', erhebliche wissenschaftliche Unsicherheiten sowie die Mehrdeutigkeit unvermeidlicher Werturteile. Die Entwicklung eines hierarchischen Konzeptmodells erlaubt die Strukturierung der verschiedenen Ans{\"a}tze sowie die Darstellung eines mehrstufigen Entwicklungsprozesses, der sich in der Praxis und der zu Grunde liegenden Theorie von Studien zur Vulnerabilit{\"a}t hinsichtlich des Klimawandels wiederspiegelt. 'Integrated Assessment'-Modelle des Klimawandels sind wissenschaftliche Werkzeuge, welche eine vereinfachte Beschreibung des gekoppelten Mensch-Klima-Systems enthalten. Die wichtigsten entscheidungstheoretischen Ans{\"a}tze im Bereich des modellbasierten 'Integrated Assessment' werden im Hinblick auf ihre F{\"a}higkeit zur ad{\"a}quaten Darstellung klimapolitischer Entscheidungsprobleme bewertet. Dabei stellt der 'Leitplankenansatz' eine 'inverse' Herangehensweise zur Unterst{\"u}tzung klimapolitischer Entscheidungen dar, bei der versucht wird, die Gesamtheit der klimapolitischen Strategien zu bestimmen, die mit einer Reihe von zuvor normativ bestimmten Mindestkriterien (den sogenannten 'Leitplanken') vertr{\"a}glich sind. Dieser Ansatz verbindet bis zu einem gewissen Grad die wissenschaftliche Strenge und Objektivit{\"a}t simulationsbasierter Ans{\"a}tze mit der F{\"a}higkeit von Optimierungsans{\"a}tzen, die Gesamtheit aller Entscheidungsoptionen zu ber{\"u}cksichtigen. Das ICLIPS-Modell ist das erste 'Integrated Assessment'-Modell des Klimawandels, welches den Leitplankenansatz implementiert. Die Darstellung von Klimafolgen ist eine wichtige Herausforderung f{\"u}r 'Integrated Assessment'-Modelle des Klimawandels. Eine Betrachtung bestehender 'Integrated Assessment'-Modelle offenbart große Unterschiede in der Ber{\"u}cksichtigung verschiedener vom Klimawandel betroffenen Sektoren, in der Wahl des bzw. der Indikatoren zur Darstellung von Klimafolgen, in der Ber{\"u}cksichtigung nicht-klimatischer Entwicklungen einschließlich gezielter Anpassungsmaßnahmen an den Klimawandel, in der Behandlung von Unsicherheiten und in der Ber{\"u}cksichtigung von 'singul{\"a}ren' Ereignissen. 'Integrated Assessment'-Modelle, die auf einem Inversansatz beruhen, stellen besondere Anforderungen an die Darstellung von Klimafolgen. Einerseits muss der Detaillierungsgrad hinreichend sein, um Leitplanken f{\"u}r Klimafolgen sinnvoll definieren zu k{\"o}nnen; andererseits muss die Darstellung effizient genug sein, um die Gesamtheit der m{\"o}glichen klimapolitischen Strategien erkunden zu k{\"o}nnen. Großr{\"a}umige Singularit{\"a}ten k{\"o}nnen h{\"a}ufig durch vereinfachte dynamische Modelle abgebildet werden. Diese Methode ist jedoch weniger geeignet f{\"u}r regul{\"a}re Klimafolgen, bei denen die Bestimmung relevanter Ergebnisse in der Regel die Ber{\"u}cksichtigung der Heterogenit{\"a}t von klimatischen, naturr{\"a}umlichen und sozialen Faktoren auf der lokalen oder regionalen Ebene erfordert. Klimawirkungsfunktionen stellen sich als die geeignetste Darstellung regul{\"a}rer Klimafolgen im ICLIPS-Modell heraus. Eine Klimawirkungsfunktion beschreibt in aggregierter Form die Reaktion eines klimasensitiven Systems, wie sie von einem geographisch expliziten Klimawirkungsmodell f{\"u}r eine repr{\"a}sentative Teilmenge m{\"o}glicher zuk{\"u}nftiger Entwicklungen simuliert wurde. Die in dieser Arbeit vorgestellten Klimawirkungsfunktionen nutzen die globale Mitteltemperatur sowie die atmosph{\"a}rische CO2-Konzentration als Pr{\"a}diktoren f{\"u}r global und regional aggregierte Auswirkungen des Klimawandels auf nat{\"u}rliche {\"O}kosysteme, die landwirtschaftliche Produktion und die Wasserverf{\"u}gbarkeit. Die Anwendung einer 'Musterskalierungstechnik' erm{\"o}glicht hierbei die Ber{\"u}cksichtigung der regionalen und saisonalen Muster des Klima{\"a}nderungssignals aus allgemeinen Zirkulationsmodellen, ohne die Effizienz der dynamischen Modellkomponenten zu beeintr{\"a}chtigen. Bem{\"u}hungen zur quantitativen Absch{\"a}tzung zuk{\"u}nftiger Klimafolgen sehen sich bei der Wahl geeigneter Indikatoren in der Regel einem Zielkonflikt zwischen der Relevanz eines Indikators f{\"u}r Entscheidungstr{\"a}ger und der Zuverl{\"a}ssigkeit, mit der dieser bestimmt werden kann, gegen{\"u}ber. Eine Reihe von nichtmonet{\"a}ren Indikatoren zur aggregierten Darstellung von Klimafolgen in Klimawirkungsfunktionen wird pr{\"a}sentiert, welche eine Balance zwischen diesen beiden Zielen anstreben und gleichzeitig die Beschr{\"a}nkungen ber{\"u}cksichtigen, die sich aus anderen Komponenten des ICLIPS-Modells ergeben. Klimawirkungsfunktionen werden durch verschiedene Typen von Diagrammen visualisiert, welche jeweils unterschiedliche Perspektiven auf die Ergebnismenge der Klimawirkungssimulationen erlauben. Die schiere Anzahl von Klimawirkungsfunktionen verhindert ihre umfassende Darstellung in dieser Arbeit. Ausgew{\"a}hlte Ergebnisse zu Ver{\"a}nderungen in der r{\"a}umlichen Ausdehnung von Biomen, im landwirtschaftlichen Potential verschiedener L{\"a}nder und in der Wasserverf{\"u}gbarkeit in mehreren großen Einzugsgebieten werden diskutiert. Die Gesamtheit der Klimawirkungsfunktionen wird zug{\"a}nglich gemacht durch das 'ICLIPS Impacts Tool', eine graphische Benutzeroberfl{\"a}che, die einen bequemen Zugriff auf {\"u}ber 100.000 Klimawirkungsdiagramme erm{\"o}glicht. Die technischen Aspekte der Software sowie die zugeh{\"o}rige Datenbasis wird beschrieben. Die wichtigste Anwendung von Klimawirkungsfunktionen ist im 'Inversmodus', wo sie genutzt werden, um Leitplanken zur Begrenzung von Klimafolgen in gleichzeitige Randbedingungen f{\"u}r Variablen aus dem optimierenden ICLIPS-Klima-Weltwirtschafts-Modell zu {\"u}bersetzen. Diese {\"U}bersetzung wird erm{\"o}glicht durch Algorithmen zur Bestimmung von Mengen erreichbarer Klimazust{\"a}nde ('reachable climate domains') sowie zur parametrisierten Approximation zul{\"a}ssiger Klimafenster ('admissible climate windows'), die aus Klimawirkungsfunktionen abgeleitet werden. Der umfassende Bestand an Klimawirkungsfunktionen zusammen mit diesen Algorithmen erm{\"o}glicht es dem integrierten ICLIPS-Modell, in flexibler Weise diejenigen klimapolitischen Strategien zu bestimmen, welche bestimmte in biophysikalischen Einheiten ausgedr{\"u}ckte Begrenzungen von Klimafolgen explizit ber{\"u}cksichtigen. Diese M{\"o}glichkeit bietet kein anderes intertemporal optimierendes 'Integrated Assessment'-Modell. Eine Leitplankenanalyse mit dem integrierten ICLIPS-Modell unter Anwendung ausgew{\"a}hlter Klimawirkungsfunktionen f{\"u}r Ver{\"a}nderungen nat{\"u}rlicher {\"O}kosysteme wird beschrieben. In dieser Analyse werden so genannte 'notwendige Emissionskorridore' berechnet, die vorgegebene Beschr{\"a}nkungen hinsichtlich der maximal zul{\"a}ssigen globalen Vegetationsver{\"a}nderungen und der regionalen Klimaschutzkosten ber{\"u}cksichtigen. Dies geschieht sowohl f{\"u}r eine 'Standardkombination' der drei gew{\"a}hlten Kriterien als auch f{\"u}r deren systematische Variation. Eine abschließende Diskussion aktueller Entwicklungen in der 'Integrated Assessment'-Modellierung stellt diese Arbeit mit anderen einschl{\"a}gigen Bem{\"u}hungen in Beziehung.}, language = {en} } @phdthesis{Heinig2003, author = {Heinig, Peter}, title = {The geometry of interacting liquid domains in Langmuir monolayers}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0000814}, school = {Universit{\"a}t Potsdam}, year = {2003}, abstract = {Es werden die Strukturbildung und Benetzung zweidimensionaler (2D) Phasen von Langmuir-Monolagen im lokalen thermodynamischen Gleichgewicht untersucht. Eine Langmuir-Monolage ist ein isoliertes 2D System von Surfaktanten an der Wasser/Luft-Grenzfl{\"a}che, in dem kristalline, fl{\"u}ssigkristalline, fl{\"u}ssige oder gasf{\"o}rmige Phasen auftreten, die sich in Positionsordnung und/oder Orientierungsordnung unterscheiden. Permanente elektrische Dipolmomente der Surfaktanten f{\"u}hren zu einer langreichweitigen repulsiven Selbstwechselwirkung der Monolage und zur Bildung mesoskopischer Strukturen. Es wird ein Wechselwirkungsmodell verwendet, das die Strukturbildung als Wechselspiel kurzreichweitiger Anziehung (nackte Linienspannung) und langreichweitiger Abstoßung (Oberfl{\"a}chenpotential) auf einer Skala Delta beschreibt. Physikalisch trennt Delta die beiden L{\"a}ngenskalen der lang- und kurzreichweitigen Wechselwirkung. In dieser Arbeit werden die thermodynamischen Stabilit{\"a}tsbedingungen f{\"u}r die Form einer Phasengrenzlinie (Young-Laplace-Gleichung) und Dreiphasenkontaktpunkt (Young-Bedingung) hergeleitet und zur Beschreibung experimenteller Daten genutzt: Die Linienspannung benetzender 2D Tropfen wird mit Hilfe h{\"a}ngender-Tropfen-Tensiometrie gemessen. Die Blasenform und -gr{\"o}ße von 2D Sch{\"a}umen wird theoretisch modelliert und mit experimentellen 2D Sch{\"a}umen verglichen. Kontaktwinkel werden durch die Anpassung von experimentellen Tropfen mit numerischen L{\"o}sungen der Young-Laplace-Gleichung auf Mikrometerskalen gemessen. Das Skalenverhalten des Kontaktwinkels erm{\"o}glicht die Bestimmung einer unteren Schranke von Delta. Weiterhin wird diskutiert, inwieweit das Schalten von 2D Benetzungsmodi in biologischen Membranen zur Steuerung der Reaktionskinetik ein Rolle spielen k{\"o}nnte. Hierzu werden Experimente aus unserer Gruppe, die in einer Langmuir-Monolage durchgef{\"u}hrt wurden, herangezogen. Abschließend wird die scheinbare Verletzung der Gibbs\′schen Phasenregel in Langmuir-Monolagen (nicht-horizontales Plateau der Oberfl{\"a}chendruck-Fl{\"a}che Isotherme, ausgedehntes Dreiphasengebiet in Einkomponentensystemen) quantitativ untersucht. Eine Verschmutzung der verwendeten Substanzen ist demnach die wahscheinlichste Erkl{\"a}rung, w{\"a}hrend Finite-Size-Effekte oder der Einfluss der langreichweitigen Elektrostatik die Gr{\"o}ßenordnung des Effektes nicht beschreiben k{\"o}nnen.}, language = {en} } @phdthesis{Loeffler2005, author = {L{\"o}ffler, Frank}, title = {Numerical simulations of neutron star - black hole mergers}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-7743}, school = {Universit{\"a}t Potsdam}, year = {2005}, abstract = {Collisions of black holes and neutron stars, named mixed binaries in the following, are interesting because of at least two reasons. Firstly, it is expected that they emit a large amount of energy as gravitational waves, which could be measured by new detectors. The form of those waves is expected to carry information about the internal structure of such systems. Secondly, collisions of such objects are the prime suspects of short gamma ray bursts. The exact mechanism for the energy emission is unknown so far. In the past, Newtonian theory of gravitation and modifications to it were often used for numerical simulations of collisions of mixed binary systems. However, near to such objects, the gravitational forces are so strong, that the use of General Relativity is necessary for accurate predictions. There are a lot of problems in general relativistic simulations. However, systems of two neutron stars and systems of two black holes have been studies extensively in the past and a lot of those problems have been solved. One of the remaining problems so far has been the use of hydrodynamic on excision boundaries. Inside excision regions, no evolution is carried out. Such regions are often used inside black holes to circumvent instabilities of the numerical methods near the singularity. Methods to handle hydrodynamics at such boundaries have been described and tests are shown in this work. One important test and the first application of those methods has been the simulation of a collapsing neutron star to a black hole. The success of these simulations and in particular the performance of the excision methods was an important step towards simulations of mixed binaries. Initial data are necessary for every numerical simulation. However, the creation of such initial data for general relativistic situations is in general very complicated. In this work it is shown how to obtain initial data for mixed binary systems using an already existing method for initial data of two black holes. These initial data have been used for evolutions of such systems and problems encountered are discussed in this work. One of the problems are instabilities due to different methods, which could be solved by dissipation of appropriate strength. Another problem is the expected drift of the black hole towards the neutron star. It is shown, that this can be solved by using special gauge conditions, which prevent the black hole from moving on the computational grid. The methods and simulations shown in this work are only the starting step for a much more detailed study of mixed binary system. Better methods, models and simulations with higher resolution and even better gauge conditions will be focus of future work. It is expected that such detailed studies can give information about the emitted gravitational waves, which is important in view of the newly built gravitational wave detectors. In addition, these simulations could give insight into the processes responsible for short gamma ray bursts.}, subject = {Relativistische Astrophysik}, language = {en} } @phdthesis{Prevot2006, author = {Prevot, Michelle Elizabeth}, title = {Introduction of a thermo-sensitive non-polar species into polyelectrolyte multilayer capsules for drug delivery}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-7785}, school = {Universit{\"a}t Potsdam}, year = {2006}, abstract = {The layer-by-layer assembly (LBL) of polyelectrolytes has been extensively studied for the preparation of ultrathin films due to the versatility of the build-up process. The control of the permeability of these layers is particularly important as there are potential drug delivery applications. Multilayered polyelectrolyte microcapsules are also of great interest due to their possible use as microcontainers. This work will present two methods that can be used as employable drug delivery systems, both of which can encapsulate an active molecule and tune the release properties of the active species. Poly-(N-isopropyl acrylamide), (PNIPAM) is known to be a thermo-sensitive polymer that has a Lower Critical Solution Temperature (LCST) around 32oC; above this temperature PNIPAM is insoluble in water and collapses. It is also known that with the addition of salt, the LCST decreases. This work shows Differential Scanning Calorimetry (DSC) and Confocal Laser Scanning Microscopy (CLSM) evidence that the LCST of the PNIPAM can be tuned with salt type and concentration. Microcapsules were used to encapsulate this thermo-sensitive polymer, resulting in a reversible and tunable stimuli- responsive system. The encapsulation of the PNIPAM inside of the capsule was proven with Raman spectroscopy, DSC (bulk LCST measurements), AFM (thickness change), SEM (morphology change) and CLSM (in situ LCST measurement inside of the capsules). The exploitation of the capsules as a microcontainer is advantageous not only because of the protection the capsules give to the active molecules, but also because it facilitates easier transport. The second system investigated demonstrates the ability to reduce the permeability of polyelectrolyte multilayer films by the addition of charged wax particles. The incorporation of this hydrophobic coating leads to a reduced water sensitivity particularly after heating, which melts the wax, forming a barrier layer. This conclusion was proven with Neutron Reflectivity by showing the decreased presence of D2O in planar polyelectrolyte films after annealing creating a barrier layer. The permeability of capsules could also be decreased by the addition of a wax layer. This was proved by the increase in recovery time measured by Florescence Recovery After Photobleaching, (FRAP) measurements. In general two advanced methods, potentially suitable for drug delivery systems, have been proposed. In both cases, if biocompatible elements are used to fabricate the capsule wall, these systems provide a stable method of encapsulating active molecules. Stable encapsulation coupled with the ability to tune the wall thickness gives the ability to control the release profile of the molecule of interest.}, subject = {Mikrokapsel}, language = {en} } @phdthesis{Jappsen2005, author = {Jappsen, Anne-Katharina}, title = {Present and early star formation : a study on rotational and thermal properties}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-7591}, school = {Universit{\"a}t Potsdam}, year = {2005}, abstract = {We investigate the rotational and thermal properties of star-forming molecular clouds using hydrodynamic simulations. Stars form from molecular cloud cores by gravoturbulent fragmentation. Understanding the angular momentum and the thermal evolution of cloud cores thus plays a fundamental role in completing the theoretical picture of star formation. This is true not only for current star formation as observed in regions like the Orion nebula or the ρ-Ophiuchi molecular cloud but also for the formation of stars of the first or second generation in the universe. In this thesis we show how the angular momentum of prestellar and protostellar cores evolves and compare our results with observed quantities. The specific angular momentum of prestellar cores in our models agree remarkably well with observations of cloud cores. Some prestellar cores go into collapse to build up stars and stellar systems. The resulting protostellar objects have specific angular momenta that fall into the range of observed binaries. We find that collapse induced by gravoturbulent fragmentation is accompanied by a substantial loss of specific angular momentum. This eases the "angular momentum problem" in star formation even in the absence of magnetic fields. The distribution of stellar masses at birth (the initial mass function, IMF) is another aspect that any theory of star formation must explain. We focus on the influence of the thermodynamic properties of star-forming gas and address this issue by studying the effects of a piecewise polytropic equation of state on the formation of stellar clusters. We increase the polytropic exponent γ from a value below unity to a value above unity at a certain critical density. The change of the thermodynamic state at the critical density selects a characteristic mass scale for fragmentation, which we relate to the peak of the IMF observed in the solar neighborhood. Our investigation generally supports the idea that the distribution of stellar masses depends mainly on the thermodynamic state of the gas. A common assumption is that the chemical evolution of the star-forming gas can be decoupled from its dynamical evolution, with the former never affecting the latter. Although justified in some circumstances, this assumption is not true in every case. In particular, in low-metallicity gas the timescales for reaching the chemical equilibrium are comparable or larger than the dynamical timescales. In this thesis we take a first approach to combine a chemical network with a hydrodynamical code in order to study the influence of low levels of metal enrichment on the cooling and collapse of ionized gas in small protogalactic halos. Our initial conditions represent protogalaxies forming within a fossil HII region -- a previously ionized HII region which has not yet had time to cool and recombine. We show that in these regions, H2 is the dominant and most effective coolant, and that it is the amount of H2 formed that controls whether or not the gas can collapse and form stars. For metallicities Z <= 10-3 Zsun, metal line cooling alters the density and temperature evolution of the gas by less than 1\% compared to the metal-free case at densities below 1 cm-3 and temperatures above 2000 K. We also find that an external ultraviolet background delays or suppresses the cooling and collapse of the gas regardless of whether it is metal-enriched or not. Finally, we study the dependence of this process on redshift and mass of the dark matter halo.}, subject = {Sternentstehung}, language = {en} } @phdthesis{SchneidervonDeimling2006, author = {Schneider von Deimling, Thomas}, title = {Constraining uncertainty in climate sensitivity : an ensemble simulation approach based on glacial climate}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-7778}, school = {Universit{\"a}t Potsdam}, year = {2006}, abstract = {Uncertainty about the sensitivity of the climate system to changes in the Earth's radiative balance constitutes a primary source of uncertainty for climate projections. Given the continuous increase in atmospheric greenhouse gas concentrations, constraining the uncertainty range in such type of sensitivity is of vital importance. A common measure for expressing this key characteristic for climate models is the climate sensitivity, defined as the simulated change in global-mean equilibrium temperature resulting from a doubling of atmospheric CO2 concentration. The broad range of climate sensitivity estimates (1.5-4.5°C as given in the last Assessment Report of the Intergovernmental Panel on Climate Change, 2001), inferred from comprehensive climate models, illustrates that the strength of simulated feedback mechanisms varies strongly among different models. The central goal of this thesis is to constrain uncertainty in climate sensitivity. For this objective we first generate a large ensemble of model simulations, covering different feedback strengths, and then request their consistency with present-day observational data and proxy-data from the Last Glacial Maximum (LGM). Our analyses are based on an ensemble of fully-coupled simulations, that were realized with a climate model of intermediate complexity (CLIMBER-2). These model versions cover a broad range of different climate sensitivities, ranging from 1.3 to 5.5°C, and have been generated by simultaneously perturbing a set of 11 model parameters. The analysis of the simulated model feedbacks reveals that the spread in climate sensitivity results from different realizations of the feedback strengths in water vapour, clouds, lapse rate and albedo. The calculated spread in the sum of all feedbacks spans almost the entire plausible range inferred from a sampling of more complex models. We show that the requirement for consistency between simulated pre-industrial climate and a set of seven global-mean data constraints represents a comparatively weak test for model sensitivity (the data constrain climate sensitivity to 1.3-4.9°C). Analyses of the simulated latitudinal profile and of the seasonal cycle suggest that additional present-day data constraints, based on these characteristics, do not further constrain uncertainty in climate sensitivity. The novel approach presented in this thesis consists in systematically combining a large set of LGM simulations with data information from reconstructed regional glacial cooling. Irrespective of uncertainties in model parameters and feedback strengths, the set of our model versions reveals a close link between the simulated warming due to a doubling of CO2, and the cooling obtained for the LGM. Based on this close relationship between past and future temperature evolution, we define a method (based on linear regression) that allows us to estimate robust 5-95\% quantiles for climate sensitivity. We thus constrain the range of climate sensitivity to 1.3-3.5°C using proxy-data from the LGM at low and high latitudes. Uncertainties in glacial radiative forcing enlarge this estimate to 1.2-4.3°C, whereas the assumption of large structural uncertainties may increase the upper limit by an additional degree. Using proxy-based data constraints for tropical and Antarctic cooling we show that very different absolute temperature changes in high and low latitudes all yield very similar estimates of climate sensitivity. On the whole, this thesis highlights that LGM proxy-data information can offer an effective means of constraining the uncertainty range in climate sensitivity and thus underlines the potential of paleo-climatic data to reduce uncertainty in future climate projections.}, subject = {Dynamische Modellierung}, language = {en} } @phdthesis{Schmeja2006, author = {Schmeja, Stefan}, title = {Properties of turbulent star-forming clusters : models versus observations}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-7364}, school = {Universit{\"a}t Potsdam}, year = {2006}, abstract = {Stars are born in turbulent molecular clouds that fragment and collapse under the influence of their own gravity, forming a cluster of hundred or more stars. The star formation process is controlled by the interplay between supersonic turbulence and gravity. In this work, the properties of stellar clusters created by numerical simulations of gravoturbulent fragmentation are compared to those from observations. This includes the analysis of properties of individual protostars as well as statistical properties of the entire cluster. It is demonstrated that protostellar mass accretion is a highly dynamical and time-variant process. The peak accretion rate is reached shortly after the formation of the protostellar core. It is about one order of magnitude higher than the constant accretion rate predicted by the collapse of a classical singular isothermal sphere, in agreement with the observations. For a more reasonable comparison, the model accretion rates are converted to the observables bolometric temperature, bolometric luminosity, and envelope mass. The accretion rates from the simulations are used as input for an evolutionary scheme. The resulting distribution in the Tbol-Lbol-Menv parameter space is then compared to observational data by means of a 3D Kolmogorov-Smirnov test. The highest probability found that the distributions of model tracks and observational data points are drawn from the same population is 70\%. The ratios of objects belonging to different evolutionary classes in observed star-forming clusters are compared to the temporal evolution of the gravoturbulent models in order to estimate the evolutionary stage of a cluster. While it is difficult to estimate absolute ages, the realtive numbers of young stars reveal the evolutionary status of a cluster with respect to other clusters. The sequence shows Serpens as the youngest and IC 348 as the most evolved of the investigated clusters. Finally the structures of young star clusters are investigated by applying different statistical methods like the normalised mean correlation length and the minimum spanning tree technique and by a newly defined measure for the cluster elongation. The clustering parameters of the model clusters correspond in many cases well to those from observed ones. The temporal evolution of the clustering parameters shows that the star cluster builds up from several subclusters and evolves to a more centrally concentrated cluster, while the cluster expands slower than new stars are formed.}, subject = {Sternentstehung}, language = {en} } @phdthesis{Zou2007, author = {Zou, Yong}, title = {Exploring recurrences in quasiperiodic systems}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-16497}, school = {Universit{\"a}t Potsdam}, year = {2007}, abstract = {In this work, some new results to exploit the recurrence properties of quasiperiodic dynamical systems are presented by means of a two dimensional visualization technique, Recurrence Plots(RPs). Quasiperiodicity is the simplest form of dynamics exhibiting nontrivial recurrences, which are common in many nonlinear systems. The concept of recurrence was introduced to study the restricted three body problem and it is very useful for the characterization of nonlinear systems. I have analyzed in detail the recurrence patterns of systems with quasiperiodic dynamics both analytically and numerically. Based on a theoretical analysis, I have proposed a new procedure to distinguish quasiperiodic dynamics from chaos. This algorithm is particular useful in the analysis of short time series. Furthermore, this approach demonstrates to be efficient in recognizing regular and chaotic trajectories of dynamical systems with mixed phase space. Regarding the application to real situations, I have shown the capability and validity of this method by analyzing time series from fluid experiments.}, language = {en} } @phdthesis{Miteva2007, author = {Miteva, Rositsa Stoycheva}, title = {Electron acceleration at localized wave structures in the solar corona}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-14775}, school = {Universit{\"a}t Potsdam}, year = {2007}, abstract = {Our dynamic Sun manifests its activity by different phenomena: from the 11-year cyclic sunspot pattern to the unpredictable and violent explosions in the case of solar flares. During flares, a huge amount of the stored magnetic energy is suddenly released and a substantial part of this energy is carried by the energetic electrons, considered to be the source of the nonthermal radio and X-ray radiation. One of the most important and still open question in solar physics is how the electrons are accelerated up to high energies within (the observed in the radio emission) short time scales. Because the acceleration site is extremely small in spatial extent as well (compared to the solar radius), the electron acceleration is regarded as a local process. The search for localized wave structures in the solar corona that are able to accelerate electrons together with the theoretical and numerical description of the conditions and requirements for this process, is the aim of the dissertation. Two models of electron acceleration in the solar corona are proposed in the dissertation: I. Electron acceleration due to the solar jet interaction with the background coronal plasma (the jet--plasma interaction) A jet is formed when the newly reconnected and highly curved magnetic field lines are relaxed by shooting plasma away from the reconnection site. Such jets, as observed in soft X-rays with the Yohkoh satellite, are spatially and temporally associated with beams of nonthermal electrons (in terms of the so-called type III metric radio bursts) propagating through the corona. A model that attempts to give an explanation for such observational facts is developed here. Initially, the interaction of such jets with the background plasma leads to an (ion-acoustic) instability associated with growing of electrostatic fluctuations in time for certain range of the jet initial velocity. During this process, any test electron that happen to feel this electrostatic wave field is drawn to co-move with the wave, gaining energy from it. When the jet speed has a value greater or lower than the one, required by the instability range, such wave excitation cannot be sustained and the process of electron energization (acceleration and/or heating) ceases. Hence, the electrons can propagate further in the corona and be detected as type III radio burst, for example. II. Electron acceleration due to attached whistler waves in the upstream region of coronal shocks (the electron--whistler--shock interaction) Coronal shocks are also able to accelerate electrons, as observed by the so-called type II metric radio bursts (the radio signature of a shock wave in the corona). From in-situ observations in space, e.g., at shocks related to co-rotating interaction regions, it is known that nonthermal electrons are produced preferably at shocks with attached whistler wave packets in their upstream regions. Motivated by these observations and assuming that the physical processes at shocks are the same in the corona as in the interplanetary medium, a new model of electron acceleration at coronal shocks is presented in the dissertation, where the electrons are accelerated by their interaction with such whistlers. The protons inflowing toward the shock are reflected there by nearly conserving their magnetic moment, so that they get a substantial velocity gain in the case of a quasi-perpendicular shock geometry, i.e, the angle between the shock normal and the upstream magnetic field is in the range 50--80 degrees. The so-accelerated protons are able to excite whistler waves in a certain frequency range in the upstream region. When these whistlers (comprising the localized wave structure in this case) are formed, only the incoming electrons are now able to interact resonantly with them. But only a part of these electrons fulfill the the electron--whistler wave resonance condition. Due to such resonant interaction (i.e., of these electrons with the whistlers), the electrons are accelerated in the electric and magnetic wave field within just several whistler periods. While gaining energy from the whistler wave field, the electrons reach the shock front and, subsequently, a major part of them are reflected back into the upstream region, since the shock accompanied with a jump of the magnetic field acts as a magnetic mirror. Co-moving with the whistlers now, the reflected electrons are out of resonance and hence can propagate undisturbed into the far upstream region, where they are detected in terms of type II metric radio bursts. In summary, the kinetic energy of protons is transfered into electrons by the action of localized wave structures in both cases, i.e., at jets outflowing from the magnetic reconnection site and at shock waves in the corona.}, language = {en} } @phdthesis{Glushak2007, author = {Glushak, Ksenia}, title = {Atmospheric circulation and the surface mass balance in a regional climate model of Antarctica}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-17296}, school = {Universit{\"a}t Potsdam}, year = {2007}, abstract = {Understanding the Earth's climate system and particularly climate variability presents one of the most difficult and urgent challenges in science. The Antarctic plays a crucial role in the global climate system, since it is the principal region of radiative energy deficit and atmospheric cooling. An assessment of regional climate model HIRHAM is presented. The simulations are generated with the HIRHAM model, which is modified for Antarctic applications. With a horizontal resolution of 55km, the model has been run for the period 1958-1998 creating long-term simulations from initial and boundary conditions provided by the European Centre for Medium-Range Weather Forecasts (ECMWF) ERA40 re-analysis. The model output is compared with observations from observation stations, upper air data, global atmospheric analyses and satellite data. In comparison with the observations, the evaluation shows that the simulations with the HIRHAM model capture both the large and regional scale circulation features with generally small bias in the modeled variables. On the annual time scale the largest errors in the model simulations are the overestimation total cloud cover and the colder near-surface temperature over the interior of the Antarctic plateau. The low-level temperature inversion as well as low-level wind jet is well captured by the model. The decadal scale processes were studied based on trend calculations. The long-term run was divided into two 20 years parts. The 2m temperature, 500 hPa temperature, MSLP, precipitation and net mass balance trends were calculated for both periods and over 1958 - 1998. During the last two decades the strong surface cooling was observed over the Eastern Antarctica, this result is in good agreement with the result of Chapman and Walsh (2005) who calculated the temperature trend based on the observational data. The MSLP trend reveals a big disparity between the first and second parts of the 40 year run. The overall trend shows the strengthening of the circumpolar vortex and continental anticyclone. The net mass balance as well as precipitation show a positive trend over the Antarctic Peninsula region, along Wilkes Land and in Dronning Maud Land. The Antarctic ice sheet grows over the Eastern part of Antarctica with small exceptions in Dronning Maud Land and Wilkes Land and sinks in the Antarctic Peninsula; this result is in good agreement with the satellite-measured altitude presented in Davis (2005) . To better understand the horizontal structure of MSLP, temperature and net mass balance trends the influence of the Southern Annual Mode (SAM) on the Antarctic climate was investigated. The main meteorological parameters during the positive and negative Antarctic Oscillation (AAO) phases were compared to each other. A positive/negative AAO index means strengthening/weakening of the circumpolar vortex, poleward/northward storm tracks and prevailing/weakening westerly winds. For detailed investigation of global teleconnection, two positive and one negative periods of AAO phase were chosen. The differences in MSLP and 2m temperature between positive and negative AAO years during the winter months partly explain the surface cooling during the last decades.}, language = {en} } @phdthesis{Pazienti2007, author = {Pazienti, Antonio}, title = {Manipulations of spike trains and their impact on synchrony analysis}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-17447}, school = {Universit{\"a}t Potsdam}, year = {2007}, abstract = {The interaction between neuronal cells can be identified as the computing mechanism of the brain. Neurons are complex cells that do not operate in isolation, but they are organized in a highly connected network structure. There is experimental evidence that groups of neurons dynamically synchronize their activity and process brain functions at all levels of complexity. A fundamental step to prove this hypothesis is to analyze large sets of single neurons recorded in parallel. Techniques to obtain these data are meanwhile available, but advancements are needed in the pre-processing of the large volumes of acquired data and in data analysis techniques. Major issues include extracting the signal of single neurons from the noisy recordings (referred to as spike sorting) and assessing the significance of the synchrony. This dissertation addresses these issues with two complementary strategies, both founded on the manipulation of point processes under rigorous analytical control. On the one hand I modeled the effect of spike sorting errors on correlated spike trains by corrupting them with realistic failures, and studied the corresponding impact on correlation analysis. The results show that correlations between multiple parallel spike trains are severely affected by spike sorting, especially by erroneously missing spikes. When this happens sorting strategies characterized by classifying only good'' spikes (conservative strategies) lead to less accurate results than tolerant'' strategies. On the other hand, I investigated the effectiveness of methods for assessing significance that create surrogate data by displacing spikes around their original position (referred to as dithering). I provide analytical expressions of the probability of coincidence detection after dithering. The effectiveness of spike dithering in creating surrogate data strongly depends on the dithering method and on the method of counting coincidences. Closed-form expressions and bounds are derived for the case where the dither equals the allowed coincidence interval. This work provides new insights into the methodologies of identifying synchrony in large-scale neuronal recordings, and of assessing its significance.}, language = {en} } @phdthesis{Tukhlina2008, author = {Tukhlina, Natalia}, title = {Feedback control of complex oscillatory systems}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-18546}, school = {Universit{\"a}t Potsdam}, year = {2008}, abstract = {In the present dissertation paper an approach which ensures an efficient control of such diverse systems as noisy or chaotic oscillators and neural ensembles is developed. This approach is implemented by a simple linear feedback loop. The dissertation paper consists of two main parts. One part of the work is dedicated to the application of the suggested technique to a population of neurons with a goal to suppress their synchronous collective dynamics. The other part is aimed at investigating linear feedback control of coherence of a noisy or chaotic self-sustained oscillator. First we start with a problem of suppressing synchronization in a large population of interacting neurons. The importance of this task is based on the hypothesis that emergence of pathological brain activity in the case of Parkinson's disease and other neurological disorders is caused by synchrony of many thousands of neurons. The established therapy for the patients with such disorders is a permanent high-frequency electrical stimulation via the depth microelectrodes, called Deep Brain Stimulation (DBS). In spite of efficiency of such stimulation, it has several side effects and mechanisms underlying DBS remain unclear. In the present work an efficient and simple control technique is suggested. It is designed to ensure suppression of synchrony in a neural ensemble by a minimized stimulation that vanishes as soon as the tremor is suppressed. This vanishing-stimulation technique would be a useful tool of experimental neuroscience; on the other hand, control of collective dynamics in a large population of units represents an interesting physical problem. The main idea of suggested approach is related to the classical problem of oscillation theory, namely the interaction between a self-sustained (active) oscillator and a passive load (resonator). It is known that under certain conditions the passive oscillator can suppress the oscillations of an active one. In this thesis a much more complicated case of active medium, which itself consists of thousands of oscillators is considered. Coupling this medium to a specially designed passive oscillator, one can control the collective motion of the ensemble, specifically can enhance or suppress it. Having in mind a possible application in neuroscience, the problem of suppression is concentrated upon. Second, the efficiency of suggested suppression scheme is illustrated by considering more complex case, i.e. when the population of neurons generating the undesired rhythm consists of two non-overlapping subpopulations: the first one is affected by the stimulation, while the collective activity is registered from the second one. Generally speaking, the second population can be by itself both active and passive; both cases are considered here. The possible applications of suggested technique are discussed. Third, the influence of the external linear feedback on coherence of a noisy or chaotic self-sustained oscillator is considered. Coherence is one of the main properties of self-oscillating systems and plays a key role in the construction of clocks, electronic generators, lasers, etc. The coherence of a noisy limit cycle oscillator in the context of phase dynamics is evaluated by the phase diffusion constant, which is in its turn proportional to the width of the spectral peak of oscillations. Many chaotic oscillators can be described within the framework of phase dynamics, and, therefore, their coherence can be also quantified by the way of the phase diffusion constant. The analytical theory for a general linear feedback, considering noisy systems in the linear and Gaussian approximation is developed and validated by numerical results.}, language = {en} } @phdthesis{Zemanova2007, author = {Zemanov{\´a}, Lucia}, title = {Structure-function relationship in hierarchical model of brain networks}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-18400}, school = {Universit{\"a}t Potsdam}, year = {2007}, abstract = {The mammalian brain is, with its numerous neural elements and structured complex connectivity, one of the most complex systems in nature. Recently, large-scale corticocortical connectivities, both structural and functional, have received a great deal of research attention, especially using the approach of complex networks. Here, we try to shed some light on the relationship between structural and functional connectivities by studying synchronization dynamics in a realistic anatomical network of cat cortical connectivity. We model the cortical areas by a subnetwork of interacting excitable neurons (multilevel model) and by a neural mass model (population model). With weak couplings, the multilevel model displays biologically plausible dynamics and the synchronization patterns reveal a hierarchical cluster organization in the network structure. We can identify a group of brain areas involved in multifunctional tasks by comparing the dynamical clusters to the topological communities of the network. With strong couplings of multilevel model and by using neural mass model, the dynamics are characterized by well-defined oscillations. The synchronization patterns are mainly determined by the node intensity (total input strengths of a node); the detailed network topology is of secondary importance. The biologically improved multilevel model exhibits similar dynamical patterns in the two regimes. Thus, the study of synchronization in a multilevel complex network model of cortex can provide insights into the relationship between network topology and functional organization of complex brain networks.}, language = {en} } @phdthesis{ZamoraLopez2009, author = {Zamora-L{\´o}pez, Gorka}, title = {Linking structure and function of complex cortical networks}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-52257}, school = {Universit{\"a}t Potsdam}, year = {2009}, abstract = {The recent discovery of an intricate and nontrivial interaction topology among the elements of a wide range of natural systems has altered the manner we understand complexity. For example, the axonal fibres transmitting electrical information between cortical regions form a network which is neither regular nor completely random. Their structure seems to follow functional principles to balance between segregation (functional specialisation) and integration. Cortical regions are clustered into modules specialised in processing different kinds of information, e.g. visual or auditory. However, in order to generate a global perception of the real world, the brain needs to integrate the distinct types of information. Where this integration happens, nobody knows. We have performed an extensive and detailed graph theoretical analysis of the cortico-cortical organisation in the brain of cats, trying to relate the individual and collective topological properties of the cortical areas to their function. We conclude that the cortex possesses a very rich communication structure, composed of a mixture of parallel and serial processing paths capable of accommodating dynamical processes with a wide variety of time scales. The communication paths between the sensory systems are not random, but largely mediated by a small set of areas. Far from acting as mere transmitters of information, these central areas are densely connected to each other, strongly indicating their functional role as integrators of the multisensory information. In the quest of uncovering the structure-function relationship of cortical networks, the peculiarities of this network have led us to continuously reconsider the stablished graph measures. For example, a normalised formalism to identify the "functional roles" of vertices in networks with community structure is proposed. The tools developed for this purpose open the door to novel community detection techniques which may also characterise the overlap between modules. The concept of integration has been revisited and adapted to the necessities of the network under study. Additionally, analytical and numerical methods have been introduced to facilitate understanding of the complicated statistical interrelations between the distinct network measures. These methods are helpful to construct new significance tests which may help to discriminate the relevant properties of real networks from side-effects of the evolutionary-growth processes.}, language = {en} } @phdthesis{Balzer2014, author = {Balzer, Arnim}, title = {Crab flare observations with H.E.S.S. phase II}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-72545}, school = {Universit{\"a}t Potsdam}, year = {2014}, abstract = {The H.E.S.S. array is a third generation Imaging Atmospheric Cherenkov Telescope (IACT) array. It is located in the Khomas Highland in Namibia, and measures very high energy (VHE) gamma-rays. In Phase I, the array started data taking in 2004 with its four identical 13 m telescopes. Since then, H.E.S.S. has emerged as the most successful IACT experiment to date. Among the almost 150 sources of VHE gamma-ray radiation found so far, even the oldest detection, the Crab Nebula, keeps surprising the scientific community with unexplained phenomena such as the recently discovered very energetic flares of high energy gamma-ray radiation. During its most recent flare, which was detected by the Fermi satellite in March 2013, the Crab Nebula was simultaneously observed with the H.E.S.S. array for six nights. The results of the observations will be discussed in detail during the course of this work. During the nights of the flare, the new 24 m × 32 m H.E.S.S. II telescope was still being commissioned, but participated in the data taking for one night. To be able to reconstruct and analyze the data of the H.E.S.S. Phase II array, the algorithms and software used by the H.E.S.S. Phase I array had to be adapted. The most prominent advanced shower reconstruction technique developed by de Naurois and Rolland, the template-based model analysis, compares real shower images taken by the Cherenkov telescope cameras with shower templates obtained using a semi-analytical model. To find the best fitting image, and, therefore, the relevant parameters that describe the air shower best, a pixel-wise log-likelihood fit is done. The adaptation of this advanced shower reconstruction technique to the heterogeneous H.E.S.S. Phase II array for stereo events (i.e. air showers seen by at least two telescopes of any kind), its performance using MonteCarlo simulations as well as its application to real data will be described.}, language = {en} } @phdthesis{Kellermann2011, author = {Kellermann, Thorsten}, title = {Accurate numerical relativity simulations of non-vacuumspace-times in two dimensions and applications to critical collapse}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59578}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {This Thesis puts its focus on the physics of neutron stars and its description with methods of numerical relativity. In the first step, a new numerical framework the Whisky2D code will be developed, which solves the relativistic equations of hydrodynamics in axisymmetry. Therefore we consider an improved formulation of the conserved form of these equations. The second part will use the new code to investigate the critical behaviour of two colliding neutron stars. Considering the analogy to phase transitions in statistical physics, we will investigate the evolution of the entropy of the neutron stars during the whole process. A better understanding of the evolution of thermodynamical quantities, like the entropy in critical process, should provide deeper understanding of thermodynamics in relativity. More specifically, we have written the Whisky2D code, which solves the general-relativistic hydrodynamics equations in a flux-conservative form and in cylindrical coordinates. This of course brings in 1/r singular terms, where r is the radial cylindrical coordinate, which must be dealt with appropriately. In the above-referenced works, the flux operator is expanded and the 1/r terms, not containing derivatives, are moved to the right-hand-side of the equation (the source term), so that the left hand side assumes a form identical to the one of the three-dimensional (3D) Cartesian formulation. We call this the standard formulation. Another possibility is not to split the flux operator and to redefine the conserved variables, via a multiplication by r. We call this the new formulation. The new equations are solved with the same methods as in the Cartesian case. From a mathematical point of view, one would not expect differences between the two ways of writing the differential operator, but, of course, a difference is present at the numerical level. Our tests show that the new formulation yields results with a global truncation error which is one or more orders of magnitude smaller than those of alternative and commonly used formulations. The second part of the Thesis uses the new code for investigations of critical phenomena in general relativity. In particular, we consider the head-on-collision of two neutron stars in a region of the parameter space where two final states a new stable neutron star or a black hole, lay close to each other. In 1993, Choptuik considered one-parameter families of solutions, S[P], of the Einstein-Klein-Gordon equations for a massless scalar field in spherical symmetry, such that for every P > P⋆, S[P] contains a black hole and for every P < P⋆, S[P] is a solution not containing singularities. He studied numerically the behavior of S[P] as P → P⋆ and found that the critical solution, S[P⋆], is universal, in the sense that it is approached by all nearly-critical solutions regardless of the particular family of initial data considered. All these phenomena have the common property that, as P approaches P⋆, S[P] approaches a universal solution S[P⋆] and that all the physical quantities of S[P] depend only on |P - P⋆|. The first study of critical phenomena concerning the head-on collision of NSs was carried out by Jin and Suen in 2007. In particular, they considered a series of families of equal-mass NSs, modeled with an ideal-gas EOS, boosted towards each other and varied the mass of the stars, their separation, velocity and the polytropic index in the EOS. In this way they could observe a critical phenomenon of type I near the threshold of black-hole formation, with the putative solution being a nonlinearly oscillating star. In a successive work, they performed similar simulations but considering the head-on collision of Gaussian distributions of matter. Also in this case they found the appearance of type-I critical behaviour, but also performed a perturbative analysis of the initial distributions of matter and of the merged object. Because of the considerable difference found in the eigenfrequencies in the two cases, they concluded that the critical solution does not represent a system near equilibrium and in particular not a perturbed Tolmann-Oppenheimer-Volkoff (TOV) solution. In this Thesis we study the dynamics of the head-on collision of two equal-mass NSs using a setup which is as similar as possible to the one considered above. While we confirm that the merged object exhibits a type-I critical behaviour, we also argue against the conclusion that the critical solution cannot be described in terms of equilibrium solution. Indeed, we show that, in analogy with what is found in, the critical solution is effectively a perturbed unstable solution of the TOV equations. Our analysis also considers fine-structure of the scaling relation of type-I critical phenomena and we show that it exhibits oscillations in a similar way to the one studied in the context of scalar-field critical collapse.}, language = {en} } @phdthesis{Berger2012, author = {Berger, Florian}, title = {Different modes of cooperative transport by molecular motors}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-60319}, school = {Universit{\"a}t Potsdam}, year = {2012}, abstract = {Cargo transport by molecular motors is ubiquitous in all eukaryotic cells and is typically driven cooperatively by several molecular motors, which may belong to one or several motor species like kinesin, dynein or myosin. These motor proteins transport cargos such as RNAs, protein complexes or organelles along filaments, from which they unbind after a finite run length. Understanding how these motors interact and how their movements are coordinated and regulated is a central and challenging problem in studies of intracellular transport. In this thesis, we describe a general theoretical framework for the analysis of such transport processes, which enables us to explain the behavior of intracellular cargos based on the transport properties of individual motors and their interactions. Motivated by recent in vitro experiments, we address two different modes of transport: unidirectional transport by two identical motors and cooperative transport by actively walking and passively diffusing motors. The case of cargo transport by two identical motors involves an elastic coupling between the motors that can reduce the motors' velocity and/or the binding time to the filament. We show that this elastic coupling leads, in general, to four distinct transport regimes. In addition to a weak coupling regime, kinesin and dynein motors are found to exhibit a strong coupling and an enhanced unbinding regime, whereas myosin motors are predicted to attain a reduced velocity regime. All of these regimes, which we derive both by analytical calculations and by general time scale arguments, can be explored experimentally by varying the elastic coupling strength. In addition, using the time scale arguments, we explain why previous studies came to different conclusions about the effect and relevance of motor-motor interference. In this way, our theory provides a general and unifying framework for understanding the dynamical behavior of two elastically coupled molecular motors. The second mode of transport studied in this thesis is cargo transport by actively pulling and passively diffusing motors. Although these passive motors do not participate in active transport, they strongly enhance the overall cargo run length. When an active motor unbinds, the cargo is still tethered to the filament by the passive motors, giving the unbound motor the chance to rebind and continue its active walk. We develop a stochastic description for such cooperative behavior and explicitly derive the enhanced run length for a cargo transported by one actively pulling and one passively diffusing motor. We generalize our description to the case of several pulling and diffusing motors and find an exponential increase of the run length with the number of involved motors.}, language = {en} } @phdthesis{Ohme2012, author = {Ohme, Frank}, title = {Bridging the gap between post-Newtonian theory and numerical relativity in gravitational-wave data analysis}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-60346}, school = {Universit{\"a}t Potsdam}, year = {2012}, abstract = {One of the most exciting predictions of Einstein's theory of gravitation that have not yet been proven experimentally by a direct detection are gravitational waves. These are tiny distortions of the spacetime itself, and a world-wide effort to directly measure them for the first time with a network of large-scale laser interferometers is currently ongoing and expected to provide positive results within this decade. One potential source of measurable gravitational waves is the inspiral and merger of two compact objects, such as binary black holes. Successfully finding their signature in the noise-dominated data of the detectors crucially relies on accurate predictions of what we are looking for. In this thesis, we present a detailed study of how the most complete waveform templates can be constructed by combining the results from (A) analytical expansions within the post-Newtonian framework and (B) numerical simulations of the full relativistic dynamics. We analyze various strategies to construct complete hybrid waveforms that consist of a post-Newtonian inspiral part matched to numerical-relativity data. We elaborate on exsisting approaches for nonspinning systems by extending the accessible parameter space and introducing an alternative scheme based in the Fourier domain. Our methods can now be readily applied to multiple spherical-harmonic modes and precessing systems. In addition to that, we analyze in detail the accuracy of hybrid waveforms with the goal to quantify how numerous sources of error in the approximation techniques affect the application of such templates in real gravitational-wave searches. This is of major importance for the future construction of improved models, but also for the correct interpretation of gravitational-wave observations that are made utilizing any complete waveform family. In particular, we comprehensively discuss how long the numerical-relativity contribution to the signal has to be in order to make the resulting hybrids accurate enough, and for currently feasible simulation lengths we assess the physics one can potentially do with template-based searches.}, language = {en} } @phdthesis{Mari2012, author = {Mari, Andrea}, title = {Signatures of non-classicality in optomechanical systems}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59814}, school = {Universit{\"a}t Potsdam}, year = {2012}, abstract = {This thesis contains several theoretical studies on optomechanical systems, i.e. physical devices where mechanical degrees of freedom are coupled with optical cavity modes. This optomechanical interaction, mediated by radiation pressure, can be exploited for cooling and controlling mechanical resonators in a quantum regime. The goal of this thesis is to propose several new ideas for preparing meso- scopic mechanical systems (of the order of 10^15 atoms) into highly non-classical states. In particular we have shown new methods for preparing optomechani-cal pure states, squeezed states and entangled states. At the same time, proce-dures for experimentally detecting these quantum effects have been proposed. In particular, a quantitative measure of non classicality has been defined in terms of the negativity of phase space quasi-distributions. An operational al- gorithm for experimentally estimating the non-classicality of quantum states has been proposed and successfully applied in a quantum optics experiment. The research has been performed with relatively advanced mathematical tools related to differential equations with periodic coefficients, classical and quantum Bochner's theorems and semidefinite programming. Nevertheless the physics of the problems and the experimental feasibility of the results have been the main priorities.}, language = {en} } @phdthesis{Deneke2012, author = {Deneke, Carlus}, title = {Theory of mRNA degradation}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-61998}, school = {Universit{\"a}t Potsdam}, year = {2012}, abstract = {One of the central themes of biology is to understand how individual cells achieve a high fidelity in gene expression. Each cell needs to ensure accurate protein levels for its proper functioning and its capability to proliferate. Therefore, complex regulatory mechanisms have evolved in order to render the expression of each gene dependent on the expression level of (all) other genes. Regulation can occur at different stages within the framework of the central dogma of molecular biology. One very effective and relatively direct mechanism concerns the regulation of the stability of mRNAs. All organisms have evolved diverse and powerful mechanisms to achieve this. In order to better comprehend the regulation in living cells, biochemists have studied specific degradation mechanisms in detail. In addition to that, modern high-throughput techniques allow to obtain quantitative data on a global scale by parallel analysis of the decay patterns of many different mRNAs from different genes. In previous studies, the interpretation of these mRNA decay experiments relied on a simple theoretical description based on an exponential decay. However, this does not account for the complexity of the responsible mechanisms and, as a consequence, the exponential decay is often not in agreement with the experimental decay patterns. We have developed an improved and more general theory of mRNA degradation which provides a general framework of mRNA expression and allows describing specific degradation mechanisms. We have made an attempt to provide detailed models for the regulation in different organisms. In the yeast S. cerevisiae, different degradation pathways are known to compete and furthermore most of them rely on the biochemical modification of mRNA molecules. In bacteria such as E. coli, degradation proceeds primarily endonucleolytically, i.e. it is governed by the initial cleavage within the coding region. In addition, it is often coupled to the level of maturity and the size of the polysome of an mRNA. Both for S. cerevisiae and E. coli, our descriptions lead to a considerable improvement of the interpretation of experimental data. The general outcome is that the degradation of mRNA must be described by an age-dependent degradation rate, which can be interpreted as a consequence of molecular aging of mRNAs. Within our theory, we find adequate ways to address this much debated topic from a theoretical perspective. The improvements of the understanding of mRNA degradation can be readily applied to further comprehend the mRNA expression under different internal or environmental conditions such as after the induction of transcription or stress application. Also, the role of mRNA decay can be assessed in the context of translation and protein synthesis. The ultimate goal in understanding gene regulation mediated by mRNA stability will be to identify the relevance and biological function of different mechanisms. Once more quantitative data will become available, our description allows to elaborate the role of each mechanism by devising a suitable model.}, language = {en} } @phdthesis{Patra2013, author = {Patra, Pintu}, title = {Population dynamics of bacterial persistence}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-69253}, school = {Universit{\"a}t Potsdam}, year = {2013}, abstract = {The life of microorganisms is characterized by two main tasks, rapid growth under conditions permitting growth and survival under stressful conditions. The environments, in which microorganisms dwell, vary in space and time. The microorganisms innovate diverse strategies to readily adapt to the regularly fluctuating environments. Phenotypic heterogeneity is one such strategy, where an isogenic population splits into subpopulations that respond differently under identical environments. Bacterial persistence is a prime example of such phenotypic heterogeneity, whereby a population survives under an antibiotic attack, by keeping a fraction of population in a drug tolerant state, the persister state. Specifically, persister cells grow more slowly than normal cells under growth conditions, but survive longer under stress conditions such as the antibiotic administrations. Bacterial persistence is identified experimentally by examining the population survival upon an antibiotic treatment and the population resuscitation in a growth medium. The underlying population dynamics is explained with a two state model for reversible phenotype switching in a cell within the population. We study this existing model with a new theoretical approach and present analytical expressions for the time scale observed in population growth and resuscitation, that can be easily used to extract underlying model parameters of bacterial persistence. In addition, we recapitulate previously known results on the evolution of such structured population under periodically fluctuating environment using our simple approximation method. Using our analysis, we determine model parameters for Staphylococcus aureus population under several antibiotics and interpret the outcome of cross-drug treatment. Next, we consider the expansion of a population exhibiting phenotype switching in a spatially structured environment consisting of two growth permitting patches separated by an antibiotic patch. The dynamic interplay of growth, death and migration of cells in different patches leads to distinct regimes in population propagation speed as a function of migration rate. We map out the region in parameter space of phenotype switching and migration rate to observe the condition under which persistence is beneficial. Furthermore, we present an extended model that allows mutation from the two phenotypic states to a resistant state. We find that the presence of persister cells may enhance the probability of resistant mutation in a population. Using this model, we explain the experimental results showing the emergence of antibiotic resistance in a Staphylococcus aureus population upon tobramycin treatment. In summary, we identify several roles of bacterial persistence, such as help in spatial expansion, development of multidrug tolerance and emergence of antibiotic resistance. Our study provides a theoretical perspective on the dynamics of bacterial persistence in different environmental conditions. These results can be utilized to design further experiments, and to develop novel strategies to eradicate persistent infections.}, language = {en} } @phdthesis{Bergner2011, author = {Bergner, Andr{\´e}}, title = {Synchronization in complex systems with multiple time scales}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-53407}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {In the present work synchronization phenomena in complex dynamical systems exhibiting multiple time scales have been analyzed. Multiple time scales can be active in different manners. Three different systems have been analyzed with different methods from data analysis. The first system studied is a large heterogenous network of bursting neurons, that is a system with two predominant time scales, the fast firing of action potentials (spikes) and the burst of repetitive spikes followed by a quiescent phase. This system has been integrated numerically and analyzed with methods based on recurrence in phase space. An interesting result are the different transitions to synchrony found in the two distinct time scales. Moreover, an anomalous synchronization effect can be observed in the fast time scale, i.e. there is range of the coupling strength where desynchronization occurs. The second system analyzed, numerically as well as experimentally, is a pair of coupled CO₂ lasers in a chaotic bursting regime. This system is interesting due to its similarity with epidemic models. We explain the bursts by different time scales generated from unstable periodic orbits embedded in the chaotic attractor and perform a synchronization analysis of these different orbits utilizing the continuous wavelet transform. We find a diverse route to synchrony of these different observed time scales. The last system studied is a small network motif of limit cycle oscillators. Precisely, we have studied a hub motif, which serves as elementary building block for scale-free networks, a type of network found in many real world applications. These hubs are of special importance for communication and information transfer in complex networks. Here, a detailed study on the mechanism of synchronization in oscillatory networks with a broad frequency distribution has been carried out. In particular, we find a remote synchronization of nodes in the network which are not directly coupled. We also explain the responsible mechanism and its limitations and constraints. Further we derive an analytic expression for it and show that information transmission in pure phase oscillators, such as the Kuramoto type, is limited. In addition to the numerical and analytic analysis an experiment consisting of electrical circuits has been designed. The obtained results confirm the former findings.}, language = {en} } @phdthesis{Bierbaum2011, author = {Bierbaum, Veronika}, title = {Chemomechanical coupling and motor cycles of the molecular motor myosin V}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-53614}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {In the living cell, the organization of the complex internal structure relies to a large extent on molecular motors. Molecular motors are proteins that are able to convert chemical energy from the hydrolysis of adenosine triphosphate (ATP) into mechanical work. Being about 10 to 100 nanometers in size, the molecules act on a length scale, for which thermal collisions have a considerable impact onto their motion. In this way, they constitute paradigmatic examples of thermodynamic machines out of equilibrium. This study develops a theoretical description for the energy conversion by the molecular motor myosin V, using many different aspects of theoretical physics. Myosin V has been studied extensively in both bulk and single molecule experiments. Its stepping velocity has been characterized as a function of external control parameters such as nucleotide concentration and applied forces. In addition, numerous kinetic rates involved in the enzymatic reaction of the molecule have been determined. For forces that exceed the stall force of the motor, myosin V exhibits a 'ratcheting' behaviour: For loads in the direction of forward stepping, the velocity depends on the concentration of ATP, while for backward loads there is no such influence. Based on the chemical states of the motor, we construct a general network theory that incorporates experimental observations about the stepping behaviour of myosin V. The motor's motion is captured through the network description supplemented by a Markov process to describe the motor dynamics. This approach has the advantage of directly addressing the chemical kinetics of the molecule, and treating the mechanical and chemical processes on equal grounds. We utilize constraints arising from nonequilibrium thermodynamics to determine motor parameters and demonstrate that the motor behaviour is governed by several chemomechanical motor cycles. In addition, we investigate the functional dependence of stepping rates on force by deducing the motor's response to external loads via an appropriate Fokker-Planck equation. For substall forces, the dominant pathway of the motor network is profoundly different from the one for superstall forces, which leads to a stepping behaviour that is in agreement with the experimental observations. The extension of our analysis to Markov processes with absorbing boundaries allows for the calculation of the motor's dwell time distributions. These reveal aspects of the coordination of the motor's heads and contain direct information about the backsteps of the motor. Our theory provides a unified description for the myosin V motor as studied in single motor experiments.}, language = {en} } @phdthesis{Mauri2014, author = {Mauri, Marco}, title = {A model for sigma factor competition in bacterial cells}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-72098}, school = {Universit{\"a}t Potsdam}, pages = {167}, year = {2014}, abstract = {Bacteria respond to changing environmental conditions by switching the global pattern of expressed genes. In response to specific environmental stresses the cell activates several stress-specific molecules such as sigma factors. They reversibly bind the RNA polymerase to form the so-called holoenzyme and direct it towards the appropriate stress response genes. In exponentially growing E. coli cells, the majority of the transcriptional activity is carried out by the housekeeping sigma factor, while stress responses are often under the control of alternative sigma factors. Different sigma factors compete for binding to a limited pool of RNA polymerase (RNAP) core enzymes, providing a mechanism for cross talk between genes or gene classes via the sharing of expression machinery. To quantitatively analyze the contribution of sigma factor competition to global changes in gene expression, we develop a thermodynamic model that describes binding between sigma factors and core RNAP at equilibrium, transcription, non-specific binding to DNA and the modulation of the availability of the molecular components. Association of housekeeping sigma factor to RNAP is generally favored by its abundance and higher binding affinity to the core. In order to promote transcription by alternative sigma subunits, the bacterial cell modulates the transcriptional efficiency in a reversible manner through several strategies such as anti-sigma factors, 6S RNA and generally any kind of transcriptional regulators (e.g. activators or inhibitors). By shifting the outcome of sigma factor competition for the core, these modulators bias the transcriptional program of the cell. The model is validated by comparison with in vitro competition experiments, with which excellent agreement is found. We observe that transcription is affected via the modulation of the concentrations of the different types of holoenzymes, so saturated promoters are only weakly affected by sigma factor competition. However, in case of overlapping promoters or promoters recognized by two types of sigma factors, we find that even saturated promoters are strongly affected. Active transcription effectively lowers the affinity between the sigma factor driving it and the core RNAP, resulting in complex cross talk effects and raising the question of how their in vitro measure is relevant in the cell. We also estimate that sigma factor competition is not strongly affected by non-specific binding of core RNAPs, sigma factors, and holoenzymes to DNA. Finally, we analyze the role of increased core RNAP availability upon the shut-down of ribosomal RNA transcription during stringent response. We find that passive up-regulation of alternative sigma-dependent transcription is not only possible, but also displays hypersensitivity based on the sigma factor competition. Our theoretical analysis thus provides support for a significant role of passive control during that global switch of the gene expression program and gives new insights into RNAP partitioning in the cell.}, language = {en} } @phdthesis{Holler2014, author = {Holler, Markus}, title = {Photon reconstruction for the H.E.S.S. 28 m telescope and analysis of Crab Nebula and galactic centre observations}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-72099}, school = {Universit{\"a}t Potsdam}, year = {2014}, abstract = {In the presented thesis, the most advanced photon reconstruction technique of ground-based γ-ray astronomy is adapted to the H.E.S.S. 28 m telescope. The method is based on a semi-analytical model of electromagnetic particle showers in the atmosphere. The properties of cosmic γ-rays are reconstructed by comparing the camera image of the telescope with the Cherenkov emission that is expected from the shower model. To suppress the dominant background from charged cosmic rays, events are selected based on several criteria. The performance of the analysis is evaluated with simulated events. The method is then applied to two sources that are known to emit γ-rays. The first of these is the Crab Nebula, the standard candle of ground-based γ-ray astronomy. The results of this source confirm the expected performance of the reconstruction method, where the much lower energy threshold compared to H.E.S.S. I is of particular importance. A second analysis is performed on the region around the Galactic Centre. The analysis results emphasise the capabilities of the new telescope to measure γ-rays in an energy range that is interesting for both theoretical and experimental astrophysics. The presented analysis features the lowest energy threshold that has ever been reached in ground-based γ-ray astronomy, opening a new window to the precise measurement of the physical properties of time-variable sources at energies of several tens of GeV.}, language = {en} } @phdthesis{Trabant2014, author = {Trabant, Christoph}, title = {Ultrafast photoinduced phase transitions in complex materials probed by time-resolved resonant soft x-ray diffraction}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-71377}, school = {Universit{\"a}t Potsdam}, year = {2014}, abstract = {In processing and data storage mainly ferromagnetic (FM) materials are being used. Approaching physical limits, new concepts have to be found for faster, smaller switches, for higher data densities and more energy efficiency. Some of the discussed new concepts involve the material classes of correlated oxides and materials with antiferromagnetic coupling. Their applicability depends critically on their switching behavior, i.e., how fast and how energy efficient material properties can be manipulated. This thesis presents investigations of ultrafast non-equilibrium phase transitions on such new materials. In transition metal oxides (TMOs) the coupling of different degrees of freedom and resulting low energy excitation spectrum often result in spectacular changes of macroscopic properties (colossal magneto resistance, superconductivity, metal-to-insulator transitions) often accompanied by nanoscale order of spins, charges, orbital occupation and by lattice distortions, which make these material attractive. Magnetite served as a prototype for functional TMOs showing a metal-to-insulator-transition (MIT) at T = 123 K. By probing the charge and orbital order as well as the structure after an optical excitation we found that the electronic order and the structural distortion, characteristics of the insulating phase in thermal equilibrium, are destroyed within the experimental resolution of 300 fs. The MIT itself occurs on a 1.5 ps timescale. It shows that MITs in functional materials are several thousand times faster than switching processes in semiconductors. Recently ferrimagnetic and antiferromagnetic (AFM) materials have become interesting. It was shown in ferrimagnetic GdFeCo, that the transfer of angular momentum between two opposed FM subsystems with different time constants leads to a switching of the magnetization after laser pulse excitation. In addition it was theoretically predicted that demagnetization dynamics in AFM should occur faster than in FM materials as no net angular momentum has to be transferred out of the spin system. We investigated two different AFM materials in order to learn more about their ultrafast dynamics. In Ho, a metallic AFM below T ≈ 130 K, we found that the AFM Ho can not only be faster but also ten times more energy efficiently destroyed as order in FM comparable metals. In EuTe, an AFM semiconductor below T ≈ 10 K, we compared the loss of magnetization and laser-induced structural distortion in one and the same experiment. Our experiment shows that they are effectively disentangled. An exception is an ultrafast release of lattice dynamics, which we assign to the release of magnetostriction. The results presented here were obtained with time-resolved resonant soft x-ray diffraction at the Femtoslicing source of the Helmholtz-Zentrum Berlin and at the free-electron laser in Stanford (LCLS). In addition the development and setup of a new UHV-diffractometer for these experiments will be reported.}, language = {en} } @phdthesis{Chirvasa2010, author = {Chirvasa, Mihaela}, title = {Finite difference methods for 1st Order in time, 2nd order in space, hyperbolic systems used in numerical relativity}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-42135}, school = {Universit{\"a}t Potsdam}, year = {2010}, abstract = {This thesis is concerned with the development of numerical methods using finite difference techniques for the discretization of initial value problems (IVPs) and initial boundary value problems (IBVPs) of certain hyperbolic systems which are first order in time and second order in space. This type of system appears in some formulations of Einstein equations, such as ADM, BSSN, NOR, and the generalized harmonic formulation. For IVP, the stability method proposed in [14] is extended from second and fourth order centered schemes, to 2n-order accuracy, including also the case when some first order derivatives are approximated with off-centered finite difference operators (FDO) and dissipation is added to the right-hand sides of the equations. For the model problem of the wave equation, special attention is paid to the analysis of Courant limits and numerical speeds. Although off-centered FDOs have larger truncation errors than centered FDOs, it is shown that in certain situations, off-centering by just one point can be beneficial for the overall accuracy of the numerical scheme. The wave equation is also analyzed in respect to its initial boundary value problem. All three types of boundaries - outflow, inflow and completely inflow that can appear in this case, are investigated. Using the ghost-point method, 2n-accurate (n = 1, 4) numerical prescriptions are prescribed for each type of boundary. The inflow boundary is also approached using the SAT-SBP method. In the end of the thesis, a 1-D variant of BSSN formulation is derived and some of its IBVPs are considered. The boundary procedures, based on the ghost-point method, are intended to preserve the interior 2n-accuracy. Numerical tests show that this is the case if sufficient dissipation is added to the rhs of the equations.}, language = {en} } @phdthesis{Lampert2009, author = {Lampert, Astrid}, title = {Airborne lidar observations of tropospheric arctic clouds}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-41211}, school = {Universit{\"a}t Potsdam}, year = {2009}, abstract = {Due to the unique environmental conditions and different feedback mechanisms, the Arctic region is especially sensitive to climate changes. The influence of clouds on the radiation budget is substantial, but difficult to quantify and parameterize in models. In the framework of the PhD, elastic backscatter and depolarization lidar observations of Arctic clouds were performed during the international Arctic Study of Tropospheric Aerosol, Clouds and Radiation (ASTAR) from Svalbard in March and April 2007. Clouds were probed above the inaccessible Arctic Ocean with a combination of airborne instruments: The Airborne Mobile Aerosol Lidar (AMALi) of the Alfred Wegener Institute for Polar and Marine Research provided information on the vertical and horizontal extent of clouds along the flight track, optical properties (backscatter coefficient), and cloud thermodynamic phase. From the data obtained by the spectral albedometer (University of Mainz), the cloud phase and cloud optical thickness was deduced. Furthermore, in situ observations with the Polar Nephelometer, Cloud Particle Imager and Forward Scattering Spectrometer Probe (Laboratoire de M{\´e}t{\´e}orologie Physique, France) provided information on the microphysical properties, cloud particle size and shape, concentration, extinction, liquid and ice water content. In the thesis, a data set of four flights is analyzed and interpreted. The lidar observations served to detect atmospheric structures of interest, which were then probed by in situ technique. With this method, an optically subvisible ice cloud was characterized by the ensemble of instruments (10 April 2007). Radiative transfer simulations based on the lidar, radiation and in situ measurements allowed the calculation of the cloud forcing, amounting to -0.4 W m-2. This slight surface cooling is negligible on a local scale. However, thin Arctic clouds have been reported more frequently in winter time, when the clouds' effect on longwave radiation (a surface warming of 2.8 W m-2) is not balanced by the reduced shortwave radiation (surface cooling). Boundary layer mixed-phase clouds were analyzed for two days (8 and 9 April 2007). The typical structure consisting of a predominantly liquid water layer on cloud top and ice crystals below were confirmed by all instruments. The lidar observations were compared to European Centre for Medium-Range Weather Forecasts (ECMWF) meteorological analyses. A change of air masses along the flight track was evidenced in the airborne data by a small completely glaciated cloud part within the mixed-phase cloud system. This indicates that the updraft necessary for the formation of new cloud droplets at cloud top is disturbed by the mixing processes. The measurements served to quantify the shortcomings of the ECMWF model to describe mixed-phase clouds. As the partitioning of cloud condensate into liquid and ice water is done by a diagnostic equation based on temperature, the cloud structures consisting of a liquid cloud top layer and ice below could not be reproduced correctly. A small amount of liquid water was calculated for the lowest (and warmest) part of the cloud only. Further, the liquid water content was underestimated by an order of magnitude compared to in situ observations. The airborne lidar observations of 9 April 2007 were compared to space borne lidar data on board of the satellite Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations (CALIPSO). The systems agreed about the increase of cloud top height along the same flight track. However, during the time delay of 1 h between the lidar measurements, advection and cloud processing took place, and a detailed comparison of small-scale cloud structures was not possible. A double layer cloud at an altitude of 4 km was observed with lidar at the West coast in the direct vicinity of Svalbard (14 April 2007). The cloud system consisted of two geometrically thin liquid cloud layers (each 150 m thick) with ice below each layer. While the upper one was possibly formed by orographic lifting under the influence of westerly winds, or by the vertical wind shear shown by ECMWF analyses, the lower one might be the result of evaporating precipitation out of the upper layer. The existence of ice precipitation between the two layers supports the hypothesis that humidity released from evaporating precipitation was cooled and consequently condensed as it experienced the radiative cooling from the upper layer. In summary, a unique data set characterizing tropospheric Arctic clouds was collected with lidar, in situ and radiation instruments. The joint evaluation with meteorological analyses allowed a detailed insight in cloud properties, cloud evolution processes and radiative effects.}, language = {en} } @phdthesis{Weber2004, author = {Weber, Michael H.}, title = {Robotic telescopes \& Doppler imaging : measuring differential rotation on long-period active stars}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0001834}, school = {Universit{\"a}t Potsdam}, year = {2004}, abstract = {Auf der Sonne sind viele Ph{\"a}nomene zu sehen die mit der solaren magnetischen Aktivit{\"a}t zusammenh{\"a}ngen. Das daf{\"u}r zust{\"a}ndige Magnetfeld wird durch einen Dynamo erzeugt, der sich vermutlich am Boden der Konvektionszone in der sogenannten Tachocline befindet. Angetrieben wird der Dynamo teils von der differenziellen Rotation, teils von den magnetischen Turbulenzen in der Konvektionszone. Die differentielle Rotation kann an der Sonnenoberfl{\"a}che durch beobachten der Sonnenfleckbewegungen gemessen werden.Um einen gr{\"o}ßeren Parameterraum zum Testen von Dynamotheorien zu erhalten, kann man diese Messungen auch auf andere Sterne ausdehnen. Das prim{\"a}re Problem dabei ist, dass die Oberfl{\"a}chen von Sternen nicht direkt beobachtet werden k{\"o}nnen. Indirekt kann man dies jedoch mit Hilfe der Doppler-imaging Methode erreichen, die die Doppler-Verbreitung der Spektrallinien von schnell rotierenden Sternen ben{\"u}tzt. Um jedoch ein Bild der Sternoberfl{\"a}che zu erhalten, bedarf es vieler hochaufgel{\"o}ster spektroskopischer Beobachtungen, die gleichm{\"a}ßig {\"u}ber eine Sternrotation verteilt sein m{\"u}ssen. F{\"u}r Sterne mit langen Rotationsperioden sind diese Beobachtungen nur schwierig durchzuf{\"u}hren. Das neue robotische Observatorium STELLA adressiert dieses Problem und bietet eine auf Dopplerimaging abgestimmte Ablaufplanung der Beobachtungen an. Dies wird solche Beobachtungen nicht nur leichter durchf{\"u}hrbar machen, sondern auch effektiver gestalten.Als Vorschau welche Ergebnisse mit STELLA erwartet werden k{\"o}nnen dient eine Studie an sieben Sternen die allesamt eine lange (zwischen sieben und 25 Tagen) Rotationsperiode haben. Alle Sterne zeigen differentielle Rotation, allerdings sind die Messfehler aufgrund der nicht zufriedenstellenden Datenqualit{\"a}t von gleicher Gr{\"o}ßenordnung wie die Ergebnisse, ein Problem das bei STELLA nicht auftreten wird. Um die Konsistenz der Ergebnisse zu pr{\"u}fen wurde wenn m{\"o}glich sowohl eine Kreuzkorrelationsanalyse als auch die sheared-image Methode angewandt. Vier von diesen sieben Sternen weisen eine differentielle Rotation in umgekehrter Richtung auf als auf der Sonne zu sehen ist. Die restlichen drei Sterne weisen schwache, aber in der Richtung sonnen{\"a}hnliche differentielle Rotation auf.Abschließend werden diese neuen Messungen mit bereits publizierten Werten kombiniert, und die so erhaltenen Daten auf Korrelationen zwischen differentieller Rotation, Rotationsperiode, Evolutionsstaus, Spektraltyp und Vorhandensein eines Doppelsterns {\"u}berpr{\"u}ft. Alle Sterne zusammen zeigen eine signifikante Korrelation zwischen dem Betrag der differenziellen Rotation und der Rotationsperiode. Unterscheidet man zwischen den Richtungen der differentiellen Rotation, so bleibt nur eine Korrelation der Sterne mit antisolarem Verhalten. Dar{\"u}berhinaus zeigt sich auch, dass Doppelsterne schw{\"a}cher differentiell rotieren.}, language = {en} } @phdthesis{Cemeljic2005, author = {Cemeljic, Miljenko}, title = {Resistive magnetohydrodynamic jets from protostellar accretion disks}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0001845}, school = {Universit{\"a}t Potsdam}, year = {2005}, abstract = {Astrophysikalische Jets sind ausgedehnte, kollimierte Massenausfl{\"u}sse von verschiedenen astronomischen Objekten. Zeitabh{\"a}ngige magnetohydrodynamische (MHD) Simulationen der Jet-Entwicklung m{\"u}ssen den Akrretionsprozess in der Scheibe ber{\"u}cksichtigen, da der Jet aus der Scheibenmaterie gespeist wird. Allerdings ist die simultane Berechnung der Entwicklung von Scheibe und Jet schwierig, da die charakteristischen Zeitskalen unterschiedlich sind. Selbst{\"a}hnliche Modelle zeigten, daß eine Beschreibung der Jetentstehung aus einer Akkretionsscheibe durch rein magnetische Prozesse m{\"o}glich ist.}, language = {en} } @phdthesis{Allefeld2004, author = {Allefeld, Carsten}, title = {Phase synchronization analysis of event-related brain potentials in language processing}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0001873}, school = {Universit{\"a}t Potsdam}, year = {2004}, abstract = {Das Forschungsthema Synchronisation bildet einen Schnittpunkt von Nichtlinearer Dynamik und Neurowissenschaft. So hat zum einen neurobiologische Forschung gezeigt, daß die Synchronisation neuronaler Aktivit{\"a}t einen wesentlichen Aspekt der Funktionsweise des Gehirns darstellt. Zum anderen haben Fortschritte in der physikalischen Theorie zur Entdeckung des Ph{\"a}nomens der Phasensynchronisation gef{\"u}hrt. Eine dadurch motivierte Datenanalysemethode, die Phasensynchronisations-Analyse, ist bereits mit Erfolg auf empirische Daten angewandt worden. Die vorliegende Dissertation kn{\"u}pft an diese konvergierenden Forschungslinien an. Ihren Gegenstand bilden methodische Beitr{\"a}ge zur Fortentwicklung der Phasensynchronisations-Analyse, sowie deren Anwendung auf ereigniskorrelierte Potentiale, eine besonders in den Kognitionswissenschaften wichtige Form von EEG-Daten. Die methodischen Beitr{\"a}ge dieser Arbeit bestehen zum ersten in einer Reihe spezialisierter statistischer Tests auf einen Unterschied der Synchronisationsst{\"a}rke in zwei verschiedenen Zust{\"a}nden eines Systems zweier Oszillatoren. Zweitens wird im Hinblick auf den viel-kanaligen Charakter von EEG-Daten ein Ansatz zur multivariaten Phasensynchronisations-Analyse vorgestellt. Zur empirischen Untersuchung neuronaler Synchronisation wurde ein klassisches Experiment zur Sprachverarbeitung repliziert, in dem der Effekt einer semantischen Verletzung im Satzkontext mit demjenigen der Manipulation physischer Reizeigenschaften (Schriftfarbe) verglichen wird. Hier zeigt die Phasensynchronisations-Analyse eine Verringerung der globalen Synchronisationsst{\"a}rke f{\"u}r die semantische Verletzung sowie eine Verst{\"a}rkung f{\"u}r die physische Manipulation. Im zweiten Fall l{\"a}ßt sich der global beobachtete Synchronisationseffekt mittels der multivariaten Analyse auf die Interaktion zweier symmetrisch gelegener Gehirnareale zur{\"u}ckf{\"u}hren. Die vorgelegten Befunde zeigen, daß die physikalisch motivierte Methode der Phasensynchronisations-Analyse einen wesentlichen Beitrag zur Untersuchung ereigniskorrelierter Potentiale in den Kognitionswissenschaften zu leisten vermag.}, language = {en} } @phdthesis{Clodong2004, author = {Clodong, S{\´e}bastien}, title = {Recurrent outbreaks in ecology : chaotic dynamics in complex networks}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0001626}, school = {Universit{\"a}t Potsdam}, year = {2004}, abstract = {Gegenstand der Dissertation ist die Untersuchung von wiederkehrenden Ausbr{\"u}chen (wie z.B. Epidemien) in der Natur. Dies gelang anhand von Modellen, die die Dynamik von Phytoplankton und die Ausbreitung von Krankheiten zwischen St{\"a}dten beschreiben. Diese beide Systeme bilden hervorragende Beispiele f{\"u}r solche Ph{\"a}nomene. Die Frage, ob die in der Zeit wiederkehrenden Ausbr{\"u}che ein Ausdruck chaotischer Dynamik sein k{\"o}nnen, ist aktuell in der {\"O}kologie und fasziniert Wissenschaftler dieser Disziplin. Wir konnten zeigen, dass sich das Plankton-Modell im Falle von periodischem Antreiben {\"u}ber die N{\"a}hrstoffe in einem chaotischen Regime befindet. Diese Dynamik wurde als die komplexe Wechselwirkung zweier Oszillatoren verstanden. Ebenfalls wurde die Ausbreitung von Epidemien in Netzwerken wechselwirkender St{\"a}dte mit unterschiedlichen Gr{\"o}ssen untersucht. Daf{\"u}r wurde zun{\"a}chst die Kopplung zwischen zwei St{\"a}dten als Verh{\"a}ltnis der Stadtgr{\"o}ssen eingef{\"u}hrt. Es konnte gezeigt werden, dass das System sich in einem globalen zweij{\"a}hrigen Zyklus, der auch in den realen Daten beobachtet wird, befinden kann. Der Effekt von Heterogenit{\"a}t in der Gr{\"o}sseverteilung ist durch gewichtete Kopplung von generischen Modellen (Zelt- und Logistische Abbildung) in Netzwerken im Detail untersucht worden. Eine neue Art von Kopplungsfunktion mit nichtlinearer S{\"a}ttigung wurde eingef{\"u}hrt, um die Stabilit{\"a}t des Systems zu gew{\"a}hrleisten. Diese Kopplung beinhaltet einen Parameter, der es erlaubt, die Netzwerktopologie von globaler Kopplung in gerichtete Netzwerke gleichm{\"a}ssig umzuwandeln. Die Dynamik des Systems wurde anhand von Bifurkationsdiagrammen untersucht. Zum Verst{\"a}ndnis dieser Dynamik wurde eine effektive Theorie, die die beobachteten Bifurkationen sehr gut nachahmt, entwickelt.}, language = {en} } @phdthesis{Thiel2004, author = {Thiel, Marco}, title = {Recurrences : exploiting naturally occurring analogues}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0001633}, school = {Universit{\"a}t Potsdam}, year = {2004}, abstract = {In der vorliegenden Arbeit wird die Wiederkehr im Phasenraum ausgenutzt. Dabei werden drei Hauptresultate besprochen. 1. Die Wiederkehr erlaubt die Vorhersagbarkeit des Systems zu quantifizieren. 2. Die Wiederkehr enthaelt (unter bestimmten Voraussetzungen) s{\"a}mtliche relevante Information {\"u}ber die Dynamik im Phasenraum 3. Die Wiederkehr erlaubt die Erzeugung dynamischer Ersatzdaten.}, language = {en} }