@book{AlnemrPolyvyanyyAbuJarouretal.2010, author = {Alnemr, Rehab and Polyvyanyy, Artem and AbuJarour, Mohammed and Appeltauer, Malte and Hildebrandt, Dieter and Thomas, Ivonne and Overdick, Hagen and Sch{\"o}bel, Michael and Uflacker, Matthias and Kluth, Stephan and Menzel, Michael and Schmidt, Alexander and Hagedorn, Benjamin and Pascalau, Emilian and Perscheid, Michael and Vogel, Thomas and Hentschel, Uwe and Feinbube, Frank and Kowark, Thomas and Tr{\"u}mper, Jonas and Vogel, Tobias and Becker, Basil}, title = {Proceedings of the 4th Ph.D. Retreat of the HPI Research School on Service-oriented Systems Engineering}, editor = {Meinel, Christoph and Plattner, Hasso and D{\"o}llner, J{\"u}rgen Roland Friedrich and Weske, Mathias and Polze, Andreas and Hirschfeld, Robert and Naumann, Felix and Giese, Holger}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-036-6}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-40838}, publisher = {Universit{\"a}t Potsdam}, pages = {Getr. Z{\"a}hlung}, year = {2010}, language = {en} } @article{WisotzkiBaconBrinchmannetal.2018, author = {Wisotzki, Lutz and Bacon, R. and Brinchmann, J. and Cantalupo, S. and Richter, Philipp and Schaye, J. and Schmidt, Kasper Borello and Urrutia, Tanya and Weilbacher, Peter Michael and Akhlaghi, M. and Bouche, N. and Contini, T. and Guiderdoni, B. and Herenz, E. C. and Inami, H. and Kerutt, Josephine Victoria and Leclercq, F. and Marino, R. A. and Maseda, M. and Monreal-Ibero, A. and Nanayakkara, T. and Richard, J. and Saust, R. and Steinmetz, Matthias and Wendt, Martin}, title = {Nearly all the sky is covered by Lyman-alpha emission around high-redshift galaxies}, series = {Nature : the international weekly journal of science}, volume = {562}, journal = {Nature : the international weekly journal of science}, number = {7726}, publisher = {Nature Publ. Group}, address = {London}, issn = {0028-0836}, doi = {10.1038/s41586-018-0564-6}, pages = {229 -- 232}, year = {2018}, abstract = {Galaxies are surrounded by large reservoirs of gas, mostly hydrogen, that are fed by inflows from the intergalactic medium and by outflows from galactic winds. Absorption-line measurements along the lines of sight to bright and rare background quasars indicate that this circumgalactic medium extends far beyond the starlight seen in galaxies, but very little is known about its spatial distribution. The Lyman-alpha transition of atomic hydrogen at a wavelength of 121.6 nanometres is an important tracer of warm (about 104 kelvin) gas in and around galaxies, especially at cosmological redshifts greater than about 1.6 at which the spectral line becomes observable from the ground. Tracing cosmic hydrogen through its Lyman-a emission has been a long-standing goal of observational astrophysics(1-3), but the extremely low surface brightness of the spatially extended emission is a formidable obstacle. A new window into circumgalactic environments was recently opened by the discovery of ubiquitous extended Lyman-alpha emission from hydrogen around high-redshift galaxies(4,5). Such measurements were previously limited to especially favourable systems(6-8) or to the use of massive statistical averaging(9,10) because of the faintness of this emission. Here we report observations of low-surface-brightness Lyman-alpha emission surrounding faint galaxies at redshifts between 3 and 6. We find that the projected sky coverage approaches 100 per cent. The corresponding rate of incidence (the mean number of Lyman-alpha emitters penetrated by any arbitrary line of sight) is well above unity and similar to the incidence rate of high-column-density absorbers frequently detected in the spectra of distant quasars(11-14). This similarity suggests that most circumgalactic atomic hydrogen at these redshifts has now been detected in emission.}, language = {en} } @misc{HornConradSeipLiebigetal.2023, author = {Horn-Conrad, Antje and Seip, Juliane and Liebig, Ferenc and Engel, Silke and Schuster, Stefanie and Jung, Karina and Aust, Sarah-Madeleine and Kampe, Heike and Lentz, Christine and Mikulla, Stefanie and Zimmermann, Matthias and Agrofylax, Luisa and Scholz, Jana and Schmidt, Debby}, title = {Portal Transfer}, number = {2023}, issn = {2747-6898}, doi = {10.25932/publishup-61365}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-613650}, pages = {78}, year = {2023}, abstract = {Liebe Leserinnen und Leser, kein Nachrichtentag vergeht, an dem nicht die Expertise aus der Wissenschaft gefragt ist: Ob zum russischen Angriffskrieg in der Ukraine, zur UNKlimakonferenz in {\"A}gypten, zur Flutkatastrophe in Pakistan, zum D{\"u}rresommer, zur Energiekrise, selbst zur umstrittenen Fußballweltmeisterschaft in Katar standen und stehen Expertinnen und Experten in den Medien Rede und Antwort. Auch aus der Universit{\"a}t Potsdam. Wir haben sie gefragt, wie sie damit umgehen, wie es ihnen gelingt, aus der laufenden Forschung heraus aktuelle Probleme zu bewerten. Und was davon bleibt, wenn das {\"o}ffentliche Interesse abebbt. F{\"u}r die Potsdamer Politik- und Verwaltungswissenschaftlerin Sabine Kuhlmann besteht die Kunst darin, „außerhalb der Krise Ideen und L{\"o}sungsans{\"a}tze zu verstetigen und sie tats{\"a}chlich in die Praxis umzusetzen". In unserem Alumni- und Transfermagazin berichten wir davon, was und wie die Universit{\"a}t Potsdam dazu beitr{\"a}gt. Wir erz{\"a}hlen, wie Erfindungen zu Innovationen in der Wirtschaft werden und sich Start-ups auf den Weg machen, ihr Produkt selbst zu vermarkten. Das Spektrum reicht von Meeresfr{\"u}chten auf Pflanzenbasis bis zu einer App, mit der sich Fr{\"u}hformen der Demenz erkennen lassen. Neben neuen Technologien kommt es aber vor allem darauf an, das an der Universit{\"a}t erzeugte Wissen in die Praxis zu transferieren. Deshalb stellen wir ein Programm zur Bek{\"a}mpfung von Hassrede in der Schule vor oder auch eine Klettertherapie zur Behandlung von Skoliose. Und wir zeigen, wie eine Studie zur sportlichen Leistungskraft von Kindern helfen kann, den Sportunterricht zu verbessern. Den gr{\"o}ßten Teil des an der Universit{\"a}t produzierten Wissens tragen die Studierenden in die Welt, wenn sie nach ihrem Abschluss als Musiklehrerin in einer Schule arbeiten oder als Software-Ingenieur im eigenen Unternehmen, als Geologin nach Seltenen Erden sch{\"u}rfen, als {\"O}kologe ausgelaugte B{\"o}den wieder fruchtbar machen oder als Politikerin ein Ministerium leiten. Sie alle kommen in diesem Magazin zu Wort. Oder in unserem neuen Podcast „Listen.UP", in dem Studierende, Forschende und Alumni von ihren Transferprojekten erz{\"a}hlen. Von der Gr{\"u}nderin Ulrike B{\"o}ttcher erf{\"a}hrt man dort zum Beispiel, wie sie mit Schnallen, {\"O}sen und Kn{\"o}pfen aus Bio- Materialien die Modeindustrie in diesem Bereich nachhaltig ver{\"a}ndern will. Nachzulesen ist das auch in diesem Heft. Immer dort, wo das „Listen. UP"-Logo erscheint, lohnt es, zus{\"a}tzlich in den Podcast hineinzuh{\"o}ren.}, language = {de} } @inproceedings{PatuchovaKleinFranzkeetal.2014, author = {Patuchova, Nadezda B. and Klein, Eckart and Franzke, Jochen and B{\"u}chner, Christiane and Doroshenko, Egor N. and Hoof, Karsten and Zenin, Sergey S. and Thiele, Carmen and Schmidt, Carmen and Fadeev, Vladimir Ivanovič and Dombert, Matthias and Sadovnikova, Galina D. and Schulze, Carola and Luchterhandt, Otto and Syuzyukina, Oxana}, title = {Verfassungsentwicklung in Russland und Deutschland : Materialien des russisch-deutschen Symposiums anl{\"a}sslich des 20. Jahrestages der Verfassung der Russischen F{\"o}deration am 25. und 26. September 2013 an der Universit{\"a}t Potsdam}, editor = {Fadeev, Vladimir Ivanovič and Schulze, Carola}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-289-6}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-70418}, pages = {XI, 149}, year = {2014}, abstract = {Der Band enth{\"a}lt die Tagungsmaterialien des deutsch-russichen Symposiums zum Thema "Verfassungsentwicklung in Russland und Deutschland", welches am 25. und 26. September 2013 in Potsdam stattfand. Die Tagung wurde anl{\"a}sslich des 20. Jahrestages der russischen Verfassung vom Dezember 2013 durchgef{\"u}hrt. Die inhaltlichen Schwerpunkte bilden die Themen: Verfassungsentstehung, Verfassungs{\"a}nderung, Verfassungsprinzipien, Landesverfassungen, Fortentwicklung der Verfassung durch die Verfassungsgerichtsbarkeit und Grundrechte, die jeweils aus russischer und deutscher Sicht behandelt werden. Erg{\"a}nzend befasst sich jeweils ein Betrag mit aktuellen Problemen der Menschenrechtsverwirklichung in Russland und der Ausl{\"a}nderintegration in Deutschland und Russland im Vergleich.}, language = {de} } @book{OlsenStiebelsBierwischetal.2019, author = {Olsen, Susan and Stiebels, Barbara and Bierwisch, Manfred and Zimmermann, Ilse and Cavar, Damir and Georgi, Doreen and Bacskai-Atkari, Julia and Alexiadou, Artemis and Błaszczak, Joanna and M{\"u}ller, Gereon and Šim{\´i}k, Radek and Meinunger, Andr{\´e} and Thiersch, Craig and Arnhold, Anja and F{\´e}ry, Caroline and Bayer, Josef and Titov, Elena and Fominyam, Henry and Tran, Thuan and Bornkessel-Schlesewsky, Ina D. and Schlesewsky, Matthias and Zimmermann, Malte and H{\"a}ussler, Jana and Mucha, Anne and Schmidt, Andreas and Weskott, Thomas and Wierzba, Marta and Stede, Manfred and Skopeteas, Stavros and Gafos, Adamantios I. and Haider, Hubert and Wunderlich, Dieter and Staudacher, Peter and Rauh, Gisa}, title = {Of Trees and Birds}, editor = {Brown, Jessica M. M. and Schmidt, Andreas and Wierzba, Marta}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-457-9}, doi = {10.25932/publishup-42654}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-426542}, publisher = {Universit{\"a}t Potsdam}, pages = {xvi, 435}, year = {2019}, abstract = {Gisbert Fanselow's work has been invaluable and inspiring to many ­researchers working on syntax, morphology, and information ­structure, both from a ­theoretical and from an experimental perspective. This ­volume comprises a collection of articles dedicated to Gisbert on the occasion of his 60th birthday, covering a range of topics from these areas and beyond. The contributions have in ­common that in a broad sense they have to do with language structures (and thus trees), and that in a more specific sense they have to do with birds. They thus cover two of Gisbert's major interests in- and outside of the linguistic world (and ­perhaps even at the interface).}, language = {en} } @article{MunzOswaldSchmidt2011, author = {Munz, Matthias and Oswald, Sascha and Schmidt, C.}, title = {Sand box experiments to evaluate the influence of subsurface temperature probe design on temperature based water flux calculation}, series = {Hydrology and earth system sciences : HESS}, volume = {15}, journal = {Hydrology and earth system sciences : HESS}, number = {11}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1027-5606}, doi = {10.5194/hess-15-3495-2011}, pages = {3495 -- 3510}, year = {2011}, abstract = {Quantification of subsurface water fluxes based on the one dimensional solution to the heat transport equation depends on the accuracy of measured subsurface temperatures. The influence of temperature probe setup on the accuracy of vertical water flux calculation was systematically evaluated in this experimental study. Four temperature probe setups were installed into a sand box experiment to measure temporal highly resolved vertical temperature profiles under controlled water fluxes in the range of +/- 1.3 md(-1). Pass band filtering provided amplitude differences and phase shifts of the diurnal temperature signal varying with depth depending on water flux. Amplitude ratios of setups directly installed into the saturated sediment significantly varied with sand box hydraulic gradients. Amplitude ratios provided an accurate basis for the analytical calculation of water flow velocities, which matched measured flow velocities. Calculated flow velocities were sensitive to thermal properties of saturated sediment and to temperature sensor spacing, but insensitive to thermal dispersivity equal to solute dispersivity. Amplitude ratios of temperature probe setups indirectly installed into piezometer pipes were influenced by thermal exchange processes within the pipes and significantly varied with water flux direction only. Temperature time lags of small sensor distances of all setups were found to be insensitive to vertical water flux.}, language = {en} } @article{OloyaNamukobeHeydenreichetal.2021, author = {Oloya, Benson and Namukobe, Jane and Heydenreich, Matthias and Ssengooba, Willy and Schmidt, Bernd and Byamukama, Robert}, title = {Antimycobacterial activity of the extract and isolated compounds from the stem bark of Zanthoxylum leprieurii Guill. and Perr.}, series = {Natural product communications : an international journal for communications and reviews}, volume = {16}, journal = {Natural product communications : an international journal for communications and reviews}, number = {8}, publisher = {Sage Publ.}, address = {Thousand Oaks}, issn = {1934-578X}, doi = {10.1177/1934578X211035851}, pages = {8}, year = {2021}, abstract = {Zanthoxylum leprieurii Guill. and Perr. (Rutaceae) stem bark is used locally in Uganda for treating tuberculosis (TB) and cough-related infections. Lupeol (1), sesamin (2), trans-fagaramide (3), arnottianamide (4), (S)-marmesinin (5), and hesperidin (6) were isolated from the chloroform/methanol (1:1) extract of Z. leprieurii stem bark. Their structures were elucidated using spectroscopic techniques and by comparison with literature data. Furthermore, the extract and isolated compounds were subjected to antimycobacterial activity. The extract exhibited moderate activity against the susceptible (H(37)Rv) TB strain, but weak activity against the multidrug resistant (MDR)-TB strain with minimum inhibitory concentrations (MICs) of 586.0 and 1172.0 mu g/mL, respectively. Compound 3 (trans-fagaramide) showed significant antimycobacterial activity against the susceptible (H(37)Rv) TB strain (MIC 6 mu g/mL), but moderate activity against the MDR-TB strain (MIC 12.2 mu g/mL). Compounds 2, 5, 6, and 1 showed moderate activities against the susceptible (H(37)Rv) strain (MIC 12.2-98.0 mu g/mL) and moderate to weak activities against the MDR-TB strain (MIC 24.4-195.0 mu g/mL). This study reports for the first time the isolation of compounds 1 to 6 from the stem bark of Z leprieurii. trans-Fagaramide (3) may present a vital template in pursuit of novel and highly effective TB drugs.}, language = {en} } @article{MunzOswaldSchmidt2017, author = {Munz, Matthias and Oswald, Sascha and Schmidt, Christian}, title = {Coupled Long-Term Simulation of Reach-Scale Water and Heat Fluxes Across the River-Groundwater Interface for Retrieving Hyporheic Residence Times and Temperature Dynamics}, series = {Water resources research}, volume = {53}, journal = {Water resources research}, publisher = {American Geophysical Union}, address = {Washington}, issn = {0043-1397}, doi = {10.1002/2017WR020667}, pages = {8900 -- 8924}, year = {2017}, abstract = {Flow patterns in conjunction with seasonal and diurnal temperature variations control ecological and biogeochemical conditions in hyporheic sediments. In particular, hyporheic temperatures have a great impact on many temperature-sensitive microbial processes. In this study, we used 3-D coupled water flow and heat transport simulations applying the HydroGeoSphere code in combination with high-resolution observations of hydraulic heads and temperatures to quantify reach-scale water and heat flux across the river-groundwater interface and hyporheic temperature dynamics of a lowland gravel bed river. The model was calibrated in order to constrain estimates of the most sensitive model parameters. The magnitude and variations of the simulated temperatures matched the observed ones, with an average mean absolute error of 0.7 degrees C and an average Nash Sutcliffe efficiency of 0.87. Our results indicate that nonsubmerged streambed structures such as gravel bars cause substantial thermal heterogeneity within the saturated sediment at the reach scale. Individual hyporheic flow path temperatures strongly depend on the flow path residence time, flow path depth, river, and groundwater temperature. Variations in individual hyporheic flow path temperatures were up to 7.9 degrees C, significantly higher than the daily average (2.8 degrees C), but still lower than the average seasonal hyporheic temperature difference (19.2 degrees C). The distribution between flow path temperatures and residence times follows a power law relationship with exponent of about 0.37. Based on this empirical relation, we further estimated the influence of hyporheic flow path residence time and temperature on oxygen consumption which was found to partly increase by up to 29\% in simulations.}, language = {en} } @article{MunzOswaldSchmidt2016, author = {Munz, Matthias and Oswald, Sascha and Schmidt, Christian}, title = {Analysis of riverbed temperatures to determine the geometry of subsurface water flow around in-stream geomorphological structures}, series = {Journal of hydrology}, volume = {539}, journal = {Journal of hydrology}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0022-1694}, doi = {10.1016/j.jhydrol.2016.05.012}, pages = {74 -- 87}, year = {2016}, abstract = {The analytical evaluation of diurnal temperature variation in riverbed sediments provides detailed information on exchange fluxes between rivers and groundwater. The underlying assumption of the stationary, one-dimensional vertical flow field is frequently violated in natural systems where subsurface water flow often has a significant horizontal component. In this paper, we present a new methodology for identifying the geometry of the subsurface flow field using vertical temperature profiles. The statistical analyses are based on model optimisation and selection and are used to evaluate the shape of vertical amplitude ratio profiles. The method was applied to multiple profiles measured around in-stream geomorphological structures in a losing reach of a gravel bed river. The predominant subsurface flow field was systematically categorised in purely vertical and horizontal (hyporheic, parafluvial) components. The results highlight that river groundwater exchange flux at the head, crest and tail of geomorphological structures significantly deviated from the one-dimensional vertical flow, due to a significant horizontal component. The geometry of the subsurface water flow depended on the position around the geomorphological structures and on the river level. The methodology presented in this paper features great potential for characterising the spatial patterns and temporal dynamics of complex subsurface flow geometries by using measured temperature time series in vertical profiles. (C) 2016 Elsevier B.V. All rights reserved.}, language = {en} } @book{RanaMohapatraSidorovaetal.2022, author = {Rana, Kaushik and Mohapatra, Durga Prasad and Sidorova, Julia and Lundberg, Lars and Sk{\"o}ld, Lars and Lopes Grim, Lu{\´i}s Fernando and Sampaio Gradvohl, Andr{\´e} Leon and Cremerius, Jonas and Siegert, Simon and Weltzien, Anton von and Baldi, Annika and Klessascheck, Finn and Kalancha, Svitlana and Lichtenstein, Tom and Shaabani, Nuhad and Meinel, Christoph and Friedrich, Tobias and Lenzner, Pascal and Schumann, David and Wiese, Ingmar and Sarna, Nicole and Wiese, Lena and Tashkandi, Araek Sami and van der Walt, Est{\´e}e and Eloff, Jan H. P. and Schmidt, Christopher and H{\"u}gle, Johannes and Horschig, Siegfried and Uflacker, Matthias and Najafi, Pejman and Sapegin, Andrey and Cheng, Feng and Stojanovic, Dragan and Stojnev Ilić, Aleksandra and Djordjevic, Igor and Stojanovic, Natalija and Predic, Bratislav and Gonz{\´a}lez-Jim{\´e}nez, Mario and de Lara, Juan and Mischkewitz, Sven and Kainz, Bernhard and van Hoorn, Andr{\´e} and Ferme, Vincenzo and Schulz, Henning and Knigge, Marlene and Hecht, Sonja and Prifti, Loina and Krcmar, Helmut and Fabian, Benjamin and Ermakova, Tatiana and Kelkel, Stefan and Baumann, Annika and Morgenstern, Laura and Plauth, Max and Eberhard, Felix and Wolff, Felix and Polze, Andreas and Cech, Tim and Danz, Noel and Noack, Nele Sina and Pirl, Lukas and Beilharz, Jossekin Jakob and De Oliveira, Roberto C. L. and Soares, F{\´a}bio Mendes and Juiz, Carlos and Bermejo, Belen and M{\"u}hle, Alexander and Gr{\"u}ner, Andreas and Saxena, Vageesh and Gayvoronskaya, Tatiana and Weyand, Christopher and Krause, Mirko and Frank, Markus and Bischoff, Sebastian and Behrens, Freya and R{\"u}ckin, Julius and Ziegler, Adrian and Vogel, Thomas and Tran, Chinh and Moser, Irene and Grunske, Lars and Sz{\´a}rnyas, G{\´a}bor and Marton, J{\´o}zsef and Maginecz, J{\´a}nos and Varr{\´o}, D{\´a}niel and Antal, J{\´a}nos Benjamin}, title = {HPI Future SOC Lab - Proceedings 2018}, number = {151}, editor = {Meinel, Christoph and Polze, Andreas and Beins, Karsten and Strotmann, Rolf and Seibold, Ulrich and R{\"o}dszus, Kurt and M{\"u}ller, J{\"u}rgen}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-547-7}, issn = {1613-5652}, doi = {10.25932/publishup-56371}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-563712}, publisher = {Universit{\"a}t Potsdam}, pages = {x, 277}, year = {2022}, abstract = {The "HPI Future SOC Lab" is a cooperation of the Hasso Plattner Institute (HPI) and industry partners. Its mission is to enable and promote exchange and interaction between the research community and the industry partners. The HPI Future SOC Lab provides researchers with free of charge access to a complete infrastructure of state of the art hard and software. This infrastructure includes components, which might be too expensive for an ordinary research environment, such as servers with up to 64 cores and 2 TB main memory. The offerings address researchers particularly from but not limited to the areas of computer science and business information systems. Main areas of research include cloud computing, parallelization, and In-Memory technologies. This technical report presents results of research projects executed in 2018. Selected projects have presented their results on April 17th and November 14th 2017 at the Future SOC Lab Day events.}, language = {en} } @article{KammKammSchmidtetal.2006, author = {Kamm, Birgit and Kamm, Michael and Schmidt, Matthias and Starke, Ines and Kleinpeter, Erich}, title = {Chemical and biochemical generation of carbohydrates from lignocellulose-feedstock (Lupinus nootkatensis) : quantification of glucose}, issn = {0045-6535}, doi = {10.1016/j.chemosphere.2005.03.073}, year = {2006}, abstract = {Different chemical and enzymatic methods were applied for the hydrolysis of main stems from Lupinus nootkatensis (harvest November 2002). The whole process (all steps) is based on the lignocellulose-feedstock biorefinery regime. The acid hydrolysis of L. was performed with concentrated hydrochloric acid; advantages in this process are exothermic hydrolysis and the possibility of acid recovery. Enzymatic hydrolysis achieved high yields of fermentable carbohydrates (regarding to input cellulose) with high selectivity. However, this way requires the generation of cellulose from L. by chemical pulping. Monosaccharide derivatives thus obtained were identified by their GC retention times and the corresponding MS fragmentation. Hexamethyldisilazane was used as derivatization reagent to prepare the trimethylsilyl derivatives of the carbohydrates and of the degradations products of cellulose from the different fractions. The glucose content was quantified by GC peak integration with respect to an internal standard.}, language = {en} } @book{KubanRottaNolteetal.2023, author = {Kuban, Robert and Rotta, Randolf and Nolte, J{\"o}rg and Chromik, Jonas and Beilharz, Jossekin Jakob and Pirl, Lukas and Friedrich, Tobias and Lenzner, Pascal and Weyand, Christopher and Juiz, Carlos and Bermejo, Belen and Sauer, Joao and Coelh, Leandro dos Santos and Najafi, Pejman and P{\"u}nter, Wenzel and Cheng, Feng and Meinel, Christoph and Sidorova, Julia and Lundberg, Lars and Vogel, Thomas and Tran, Chinh and Moser, Irene and Grunske, Lars and Elsaid, Mohamed Esameldin Mohamed and Abbas, Hazem M. and Rula, Anisa and Sejdiu, Gezim and Maurino, Andrea and Schmidt, Christopher and H{\"u}gle, Johannes and Uflacker, Matthias and Nozza, Debora and Messina, Enza and Hoorn, Andr{\´e} van and Frank, Markus and Schulz, Henning and Alhosseini Almodarresi Yasin, Seyed Ali and Nowicki, Marek and Muite, Benson K. and Boysan, Mehmet Can and Bianchi, Federico and Cremaschi, Marco and Moussa, Rim and Abdel-Karim, Benjamin M. and Pfeuffer, Nicolas and Hinz, Oliver and Plauth, Max and Polze, Andreas and Huo, Da and Melo, Gerard de and Mendes Soares, F{\´a}bio and Oliveira, Roberto C{\´e}lio Lim{\~a}o de and Benson, Lawrence and Paul, Fabian and Werling, Christian and Windheuser, Fabian and Stojanovic, Dragan and Djordjevic, Igor and Stojanovic, Natalija and Stojnev Ilic, Aleksandra and Weidmann, Vera and Lowitzki, Leon and Wagner, Markus and Ifa, Abdessatar Ben and Arlos, Patrik and Megia, Ana and Vendrell, Joan and Pfitzner, Bjarne and Redondo, Alberto and R{\´i}os Insua, David and Albert, Justin Amadeus and Zhou, Lin and Arnrich, Bert and Szab{\´o}, Ildik{\´o} and Fodor, Szabina and Ternai, Katalin and Bhowmik, Rajarshi and Campero Durand, Gabriel and Shevchenko, Pavlo and Malysheva, Milena and Prymak, Ivan and Saake, Gunter}, title = {HPI Future SOC Lab - Proceedings 2019}, number = {158}, editor = {Meinel, Christoph and Polze, Andreas and Beins, Karsten and Strotmann, Rolf and Seibold, Ulrich and R{\"o}dszus, Kurt and M{\"u}ller, J{\"u}rgen}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-564-4}, issn = {1613-5652}, doi = {10.25932/publishup-59791}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-597915}, publisher = {Universit{\"a}t Potsdam}, pages = {xi, 301}, year = {2023}, abstract = {The "HPI Future SOC Lab" is a cooperation of the Hasso Plattner Institute (HPI) and industry partners. Its mission is to enable and promote exchange and interaction between the research community and the industry partners. The HPI Future SOC Lab provides researchers with free of charge access to a complete infrastructure of state of the art hard and software. This infrastructure includes components, which might be too expensive for an ordinary research environment, such as servers with up to 64 cores and 2 TB main memory. The offerings address researchers particularly from but not limited to the areas of computer science and business information systems. Main areas of research include cloud computing, parallelization, and In-Memory technologies. This technical report presents results of research projects executed in 2019. Selected projects have presented their results on April 9th and November 12th 2019 at the Future SOC Lab Day events.}, language = {en} } @misc{SchroenKoehliScheiffeleetal.2017, author = {Schr{\"o}n, Martin and K{\"o}hli, Markus and Scheiffele, Lena and Iwema, Joost and Bogena, Heye R. and Lv, Ling and Martini, Edoardo and Baroni, Gabriele and Rosolem, Rafael and Weimar, Jannis and Mai, Juliane and Cuntz, Matthias and Rebmann, Corinna and Oswald, Sascha and Dietrich, Peter and Schmidt, Ulrich and Zacharias, Steffen}, title = {Improving calibration and validation of cosmic-ray neutron sensors in the light of spatial sensitivity}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe}, number = {636}, doi = {10.25932/publishup-41913}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-419134}, pages = {5009 -- 5030}, year = {2017}, abstract = {In the last few years the method of cosmic-ray neutron sensing (CRNS) has gained popularity among hydrologists, physicists, and land-surface modelers. The sensor provides continuous soil moisture data, averaged over several hectares and tens of decimeters in depth. However, the signal still may contain unidentified features of hydrological processes, and many calibration datasets are often required in order to find reliable relations between neutron intensity and water dynamics. Recent insights into environmental neutrons accurately described the spatial sensitivity of the sensor and thus allowed one to quantify the contribution of individual sample locations to the CRNS signal. Consequently, data points of calibration and validation datasets are suggested to be averaged using a more physically based weighting approach. In this work, a revised sensitivity function is used to calculate weighted averages of point data. The function is different from the simple exponential convention by the extraordinary sensitivity to the first few meters around the probe, and by dependencies on air pressure, air humidity, soil moisture, and vegetation. The approach is extensively tested at six distinct monitoring sites: two sites with multiple calibration datasets and four sites with continuous time series datasets. In all cases, the revised averaging method improved the performance of the CRNS products. The revised approach further helped to reveal hidden hydrological processes which otherwise remained unexplained in the data or were lost in the process of overcalibration. The presented weighting approach increases the overall accuracy of CRNS products and will have an impact on all their applications in agriculture, hydrology, and modeling.}, language = {en} } @article{SchroenKoehliScheiffeleetal.2017, author = {Schr{\"o}n, Martin and K{\"o}hli, Markus and Scheiffele, Lena and Iwema, Joost and Bogena, Heye R. and Lv, Ling and Martini, Edoardo and Baroni, Gabriele and Rosolem, Rafael and Weimar, Jannis and Mai, Juliane and Cuntz, Matthias and Rebmann, Corinna and Oswald, Sascha and Dietrich, Peter and Schmidt, Ulrich and Zacharias, Steffen}, title = {Improving calibration and validation of cosmic-ray neutron sensors in the light of spatial sensitivity}, series = {Hydrology and earth system sciences : HESS}, volume = {21}, journal = {Hydrology and earth system sciences : HESS}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1027-5606}, doi = {10.5194/hess-21-5009-2017}, pages = {5009 -- 5030}, year = {2017}, abstract = {In the last few years the method of cosmic-ray neutron sensing (CRNS) has gained popularity among hydrologists, physicists, and land-surface modelers. The sensor provides continuous soil moisture data, averaged over several hectares and tens of decimeters in depth. However, the signal still may contain unidentified features of hydrological processes, and many calibration datasets are often required in order to find reliable relations between neutron intensity and water dynamics. Recent insights into environmental neutrons accurately described the spatial sensitivity of the sensor and thus allowed one to quantify the contribution of individual sample locations to the CRNS signal. Consequently, data points of calibration and validation datasets are suggested to be averaged using a more physically based weighting approach. In this work, a revised sensitivity function is used to calculate weighted averages of point data. The function is different from the simple exponential convention by the extraordinary sensitivity to the first few meters around the probe, and by dependencies on air pressure, air humidity, soil moisture, and vegetation. The approach is extensively tested at six distinct monitoring sites: two sites with multiple calibration datasets and four sites with continuous time series datasets. In all cases, the revised averaging method improved the performance of the CRNS products. The revised approach further helped to reveal hidden hydrological processes which otherwise remained unexplained in the data or were lost in the process of overcalibration. The presented weighting approach increases the overall accuracy of CRNS products and will have an impact on all their applications in agriculture, hydrology, and modeling.}, language = {en} } @article{RothwellMurphyAleksandrovaetal.2020, author = {Rothwell, Joseph A. and Murphy, Neil and Aleksandrova, Krasimira and Schulze, Matthias Bernd and Bešević, Jelena and Kliemann, Nathalie and Jenab, Mazda and Ferrari, Pietro and Achaintre, David and Gicquiau, Audrey and Vozar, B{\´e}atrice and Scalbert, Augustin and Huybrechts, Inge and Freisling, Heinz and Prehn, Cornelia and Adamski, Jerzy and Cross, Amanda J. and Pala, Valeria Maria and Boutron-Ruault, Marie-Christine and Dahm, Christina C. and Overvad, Kim and Gram, Inger Torhild and Sandanger, Torkjel M. and Skeie, Guri and Jakszyn, Paula and Tsilidis, Kostas K. and Hughes, David J. and van Guelpen, Bethany and Bod{\´e}n, Stina and S{\´a}nchez, Maria-Jos{\´e} and Schmidt, Julie A. and Katzke, Verena and K{\"u}hn, Tilman and Colorado-Yohar, Sandra and Tumino, Rosario and Bueno-de-Mesquita, Bas and Vineis, Paolo and Masala, Giovanna and Panico, Salvatore and Eriksen, Anne Kirstine and Tj{\o}nneland, Anne and Aune, Dagfinn and Weiderpass, Elisabete and Severi, Gianluca and Chaj{\`e}s, V{\´e}ronique and Gunter, Marc J.}, title = {Metabolic signatures of healthy lifestyle patterns and colorectal cancer risk in a European cohort}, series = {Clinical gastroenterology and hepatology}, volume = {20}, journal = {Clinical gastroenterology and hepatology}, publisher = {Elsevier}, address = {New York, NY}, issn = {1542-3565}, doi = {10.1016/j.cgh.2020.11.045}, pages = {E1061 -- E1082}, year = {2020}, abstract = {BACKGROUND \& AIMS: Colorectal cancer risk can be lowered by adherence to the World Cancer Research Fund/American Institute for Cancer Research (WCRF/AICR) guidelines. We derived metabolic signatures of adherence to these guidelines and tested their associations with colorectal cancer risk in the European Prospective Investigation into Cancer and Nutrition cohort. METHODS: Scores reflecting adherence to the WCRF/AICR recommendations (scale, 1-5) were calculated from participant data on weight maintenance, physical activity, diet, and alcohol among a discovery set of 5738 cancer-free European Prospective Investigation into Cancer and Nutrition participants with metabolomics data. Partial least-squares regression was used to derive fatty acid and endogenous metabolite signatures of the WCRF/AICR score in this group. In an independent set of 1608 colorectal cancer cases and matched controls, odds ratios (ORs) and 95\% CIs were calculated for colorectal cancer risk per unit increase in WCRF/AICR score and per the corresponding change in metabolic signatures using multivariable conditional logistic regression. RESULTS: Higher WCRF/AICR scores were characterized by metabolic signatures of increased odd-chain fatty acids, serine, glycine, and specific phosphatidylcholines. Signatures were inversely associated more strongly with colorectal cancer risk (fatty acids: OR, 0.51 per unit increase; 95\% CI, 0.29-0.90; endogenous metabolites: OR, 0.62 per unit change; 95\% CI, 0.50-0.78) than the WCRF/AICR score (OR, 0.93 per unit change; 95\% CI, 0.86-1.00) overall. Signature associations were stronger in male compared with female participants. CONCLUSIONS: Metabolite profiles reflecting adherence to WCRF/AICR guidelines and additional lifestyle or biological risk factors were associated with colorectal cancer. Measuring a specific panel of metabolites representative of a healthy or unhealthy lifestyle may identify strata of the population at higher risk of colorectal cancer.}, language = {en} } @article{KrokeSchmidtAminietal.2022, author = {Kroke, Anja and Schmidt, Annemarie and Amini, Anna M. and Kalotai, Nicole and Lehmann, Andreas and Haardt, Julia and Bauer, J{\"u}rgen M. and Bischoff-Ferrari, Heike A. and Boeing, Heiner and Egert, Sarah and Ellinger, Sabine and K{\"u}hn, Tilman and Louis, Sandrine and Lorkowski, Stefan and Nimptsch, Katharina and Remer, Thomas and Schulze, Matthias B. and Siener, Roswitha and Stangl, Gabriele and Volkert, Dorothee and Zittermann, Armin and Buyken, Anette E. and Watzl, Bernhard and Schwingshackl, Lukas}, title = {Dietary protein intake and health-related outcomes: a methodological protocol for the evidence evaluation and the outline of an evidence to decision framework underlying the evidence-based guideline of the German Nutrition Society}, series = {European journal of nutrition}, volume = {61}, journal = {European journal of nutrition}, number = {4}, publisher = {Springer Nature}, address = {Heidelberg}, organization = {German Nutr Soc}, issn = {1436-6207}, doi = {10.1007/s00394-021-02789-5}, pages = {2091 -- 2101}, year = {2022}, abstract = {Purpose: The present work aimed to delineate (i) a revised protocol according to recent methodological developments in evidence generation, to (ii) describe its interpretation, the assessment of the overall certainty of evidence and to (iii) outline an Evidence to Decision framework for deriving an evidence-based guideline on quantitative and qualitative aspects of dietary protein intake. Methods A methodological protocol to systematically investigate the association between dietary protein intake and several health outcomes and for deriving dietary protein intake recommendations for the primary prevention of various non-communicable diseases in the general adult population was developed. Results The developed methodological protocol relies on umbrella reviews including systematic reviews with or without meta-analyses. Systematic literature searches in three databases will be performed for each health-related outcome. The methodological quality of all selected systematic reviews will be evaluated using a modified version of AMSTAR 2, and the outcome-specific certainty of evidence for systematic reviews with or without meta-analysis will be assessed with NutriGrade. The general outline of the Evidence to Decision framework foresees that recommendations in the derived guideline will be given based on the overall certainty of evidence as well as on additional criteria such as sustainability. Conclusion The methodological protocol permits a systematic evaluation of published systematic reviews on dietary protein intake and its association with selected health-related outcomes. An Evidence to Decision framework will be the basis for the overall conclusions and the resulting recommendations for dietary protein intake.}, language = {en} }