@article{ZaikinKurths2006,
  author    = {Zaikin, Alexey and Kurths, J{\"u}rgen},
  title     = {Optimal length transportation hypothesis to model proteasome product size distribution},
  series = {Journal of biological physics : emphasizing physical principles in biological research ; an international journal for the formulation and application of mathematical models in the biological sciences},
  volume    = {32},
  journal   = {Journal of biological physics : emphasizing physical principles in biological research ; an international journal for the formulation and application of mathematical models in the biological sciences},
  number    = {3-4},
  publisher = {Springer},
  address   = {Dordrecht},
  issn      = {0092-0606},
  doi       = {10.1007/s10867-006-9014-z},
  pages     = {231 -- 243},
  year      = {2006},
  abstract  = {This paper discusses translocation features of the 20S proteasome in order to explain typical proteasome length distributions. We assume that the protein transport depends significantly on the fragment length with some optimal length which is transported most efficiently. By means of a simple one-channel model, we show that this hypothesis can explain both the one- and the three-peak length distributions found in experiments. A possible mechanism of such translocation is provided by so-called fluctuation-driven transport.},
  language  = {en}
}
@article{ThielRomanoKurthsetal.2008,
  author    = {Thiel, Marco and Romano, Maria Carmen and Kurths, J{\"u}rgen and Rolfs, Martin and Kliegl, Reinhold},
  title     = {Generating surrogates from recurrences},
  issn      = {1364-503X},
  year      = {2008},
  abstract  = {In this paper, we present an approach to recover the dynamics from recurrences of a system and then generate (multivariate) twin surrogate (TS) trajectories. In contrast to other approaches, such as the linear-like surrogates, this technique produces surrogates which correspond to an independent copy of the underlying system, i.e. they induce a trajectory of the underlying system visiting the attractor in a different way. We show that these surrogates are well suited to test for complex synchronization, which makes it possible to systematically assess the reliability of synchronization analyses. We then apply the TS to study binocular fixational movements and find strong indications that the fixational movements of the left and right eye are phase synchronized. This result indicates that there might be only one centre in the brain that produces the fixational movements in both eyes or a close link between the two centres.},
  language  = {en}
}
@article{WuZhouChenetal.2010,
  author    = {Wu, Ye and Zhou, Changsong and Chen, Maoyin and Xiao, Jinghua and Kurths, J{\"u}rgen},
  title     = {Human comment dynamics in on-line social systems},
  issn      = {0378-4371},
  doi       = {10.1016/j.physa.2010.08.049},
  year      = {2010},
  abstract  = {Human comment is studied using data from 'tianya' which is one of the most popular on-line social systems in China. We found that the time interval between two consecutive comments on the same topic, called inter-event time, follows a power-law distribution. This result shows that there is no characteristic decay time on a topic. It allows for very long periods without comments that separate bursts of intensive comments. Furthermore, the frequency of a different ID commenting on a topic also follows a power-law distribution. It indicates that there are some "hubs" in the topic who lead the direction of the public opinion. Based on the personal comments habit, a model is introduced to explain these phenomena. The numerical simulations of the model fit well with the empirical results. Our findings are helpful for discovering regular patterns of human behavior in on-line society and the evolution of the public opinion on the virtual as well as real society.},
  language  = {en}
}
@article{WinterhalderSchelterKurthsetal.2006,
  author    = {Winterhalder, Matthias and Schelter, B and Kurths, J{\"u}rgen and Schulze-Borthage, A and Timmer, Jens},
  title     = {Sensitivity and specificity of coherence and phase synchronization analysis},
  doi       = {10.1016/j.physleta.2006.03.018},
  year      = {2006},
  abstract  = {In this Letter, we show that coherence and phase synchronization analysis are sensitive but not specific in detecting the correct class of underlying dynamics. We propose procedures to increase specificity and demonstrate the power of the approach by application to paradigmatic dynamic model systems. (c) 2006 Elsevier B.V. All rights reserved},
  language  = {en}
}
@article{DanaBlasiusKurths2006,
  author    = {Dana, Syamal Kumar and Blasius, Bernd and Kurths, J{\"u}rgen},
  title     = {Experimental evidence of anomalous phase synchronization in two diffusively coupled Chua oscillators},
  issn      = {1054-1500},
  doi       = {10.1063/1.2197168},
  year      = {2006},
  abstract  = {We study the transition to phase synchronization in two diffusively coupled, nonidentical Chua oscillators. In the experiments, depending on the used parameterization, we observe several distinct routes to phase synchronization, including states of either in-phase, out-of-phase, or antiphase synchronization, which may be intersected by an intermediate desynchronization regime with large fluctuations of the frequency difference. Furthermore, we report the first experimental evidence of an anomalous transition to phase synchronization, which is characterized by an initial enlargement of the natural frequency difference with coupling strength. This results in a maximal frequency disorder at intermediate coupling levels, whereas usual phase synchronization via monotonic decrease in frequency difference sets in only for larger coupling values. All experimental results are supported by numerical simulations of two coupled Chua models},
  language  = {en}
}
@article{VasconcelosLopesVianaetal.2006,
  author    = {Vasconcelos, D. B. and Lopes, S. R. and Viana, R. L. and Kurths, J{\"u}rgen},
  title     = {Spatial recurrence plots},
  doi       = {10.1103/Physreve.73.056207},
  year      = {2006},
  abstract  = {We propose an extension of the recurrence plot concept to perform quantitative analyzes of roughness and disorder of spatial patterns at a fixed time. We introduce spatial recurrence plots (SRPs) as a graphical representation of the pointwise correlation matrix, in terms of a two-dimensional spatial return plot. This technique is applied to the study of complex patterns generated by coupled map lattices, which are characterized by measures of complexity based on SRPs. We show that the complexity measures we propose for SRPs provide a systematic way of investigating the distribution of spatially coherent structures, such as synchronization domains, in lattice profiles. This approach has potential for many more applications, e.g., in surface roughness analyzes},
  language  = {en}
}
@article{BaptistaPereiraKurths2006,
  author    = {Baptista, Murilo da Silva and Pereira, Tiago and Kurths, J{\"u}rgen},
  title     = {Upper bounds in phase synchronous weak coherent chaotic attractors},
  issn      = {0167-2789},
  doi       = {10.1016/j.physd.2006.02.007},
  year      = {2006},
  abstract  = {An approach is presented for coupled chaotic systems with weak coherent motion, from which we estimate the upper bound value for the absolute phase difference in phase synchronous states. This approach shows that synchronicity in phase implies synchronicity in the time of events, a characteristic explored to derive an equation to detect phase synchronization, based on the absolute difference between the time of these events. We demonstrate the potential use of this approach for the phase coherent and the funnel attractor of the Rossler system, as well as for the spiking/bursting Rulkov map.},
  language  = {en}
}
@article{BaptistaPereiraSartorellietal.2005,
  author    = {Baptista, Murilo da Silva and Pereira, Tiago and Sartorelli, J. C. and Caldas, Ibere Luiz and Kurths, J{\"u}rgen},
  title     = {Non-transitive maps in phase synchronization},
  year      = {2005},
  abstract  = {Concepts from Ergodic Theory are used to describe the existence of special non-transitive maps in attractors of phase synchronous chaotic oscillators. In particular, it is shown that, for a class of phase-coherent oscillators, these special maps imply phase synchronization. We illustrate these ideas in the sinusoidally forced Chua's circuit and two coupled Rossler oscillators. Furthermore, these results are extended to other coupled chaotic systems. In addition, a phase for a chaotic attractor is defined from the tangent vector of the flow. Finally, it is discussed how these maps can be used for the real-time detection of phase synchronization in experimental systems. (c) 2005 Elsevier B.V. All rights reserved},
  language  = {en}
}
@article{KitajimaKurths2005,
  author    = {Kitajima, H. and Kurths, J{\"u}rgen},
  title     = {Synchronized firing of FitzHugh-Nagumo neurons by noise},
  issn      = {1054-1500},
  year      = {2005},
  abstract  = {We investigate the influence of noise on synchronization between the spiking activities of neurons with external impulsive forces. We first analyze the dependence of the synchronized firing on the amplitude and the angular frequency of the impulsive force in the noise-free system. Three cases (regular spiking, traveling wave, and chaotic spiking) with low synchronized firing are chosen to study effects due to noise. In each case we find that small noise can be a promoter of synchronization phenomena in neural activities, by choosing an appropriate noise intensity acting on some of the neurons. (C) 2005 American Institute of Physics},
  language  = {en}
}
@article{BeimGrabenFrischFinketal.2005,
  author    = {Beim Graben, Peter and Frisch, Stefan and Fink, A. and Saddy, Douglas and Kurths, J{\"u}rgen},
  title     = {Topographic voltage and coherence mapping of brain potentials by means of the symbolic resonance analysis},
  issn      = {1539-3755},
  year      = {2005},
  abstract  = {We apply the recently developed symbolic resonance analysis to electroencephalographic measurements of event- related brain potentials (ERPs) in a language processing experiment by using a three-symbol static encoding with varying thresholds for analyzing the ERP epochs, followed by a spin-flip transformation as a nonlinear filter. We compute an estimator of the signal-to-noise ratio (SNR) for the symbolic dynamics measuring the coherence of threshold-crossing events. Hence, we utilize the inherent noise of the EEG for sweeping the underlying ERP components beyond the encoding thresholds. Plotting the SNR computed within the time window of a particular ERP component (the N400) against the encoding thresholds, we find different resonance curves for the experimental conditions. The maximal differences of the SNR lead to the estimation of optimal encoding thresholds. We show that topographic brain maps of the optimal threshold voltages and of their associated coherence differences are able to dissociate the underlying physiological processes, while corresponding maps gained from the customary voltage averaging technique are unable to do so},
  language  = {en}
}