@article{YaoubaKochGuantaietal.2018, author = {Yaouba, Souaibou and Koch, Andreas and Guantai, Eric M. and Derese, Solomon and Irungu, Beatrice and Heydenreich, Matthias and Yenesew, Abiy}, title = {Alkenyl cyclohexanone derivatives from Lannea rivae and Lannea schweinfurthii}, series = {Phytochemistry letters / Phytochemical Society of Europe}, volume = {23}, journal = {Phytochemistry letters / Phytochemical Society of Europe}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1874-3900}, doi = {10.1016/j.phytol.2017.12.001}, pages = {141 -- 148}, year = {2018}, abstract = {Phytochemical investigation of the CH2Cl2/MeOH (1:1) extract of the roots of Lannea rivae (Chiov) Sacleux (Anacardiaceae) led to the isolation of a new alkenyl cyclohexenone derivative: (4R,6S)-4,6-dihydroxy-6-((Z)-nonadec-14′-en-1-yl)cyclohex-2-en-1-one (1), and a new alkenyl cyclohexanol derivative: (2S*,4R*,5S*)-2,4,5-trihydroxy-2-((Z)-nonadec-14′-en-1-yl)cyclohexanone (2) along with four known compounds, namely epicatechin gallate, taraxerol, taraxerone and β-sitosterol; while the stem bark afforded two known compounds, daucosterol and lupeol. Similar investigation of the roots of Lannea schweinfurthii (Engl.) Engl. led to the isolation of four known compounds: 3-((E)-nonadec-16′-enyl)phenol, 1-((E)-heptadec-14′-enyl)cyclohex-4-ene-1,3-diol, catechin, and 1-((E)-pentadec-12′-enyl)cyclohex-4-ene-1,3-diol. The structures of the isolated compounds were determined by NMR spectroscopy and mass spectrometry. The absolute configuration of compound 1 was established by quantum chemical ECD calculations. In an antibacterial activity assay using the microbroth kinetic method, compound 1 showed moderate activity against Escherichia coli while compound 2 exhibited moderate activity against Staphylococcus aureus. Compound 1 also showed moderate activity against E. coli using the disc diffusion method. The roots extract of L. rivae was notably cytotoxic against both the DU-145 prostate cancer cell line and the Vero mammalian cell line (CC50 = 5.24 and 5.20 μg/mL, respectively). Compound 1 was also strongly cytotoxic against the DU-145 cell line (CC50 = 0.55 μg/mL) but showed no observable cytotoxicity (CC50 > 100 μg/mL) against the Vero cell line. The roots extract of L. rivae and L. schweinfurthii, epicatechin gallate as well as compound 1 exhibited inhibition of carageenan-induced inflammation.}, language = {en} } @article{TahtinenBagnoKochetal.2004, author = {Tahtinen, Petri and Bagno, Alessandro and Koch, Andreas and Pihlaja, Kalevi}, title = {Conformational analysis of saturated trans-fused 1,3,2-benzoxazaphosphinine 2-oxides - DFT calculation of NMR J(PH) coupling constants}, issn = {1434-193X}, year = {2004}, abstract = {The (3)J(P,H) and (4)J(P,H) spin-spin coupling constants of a selected test set of organophosphorus compounds, calculated by density functional theory (DFT) methods, were found to correlate well with the experimentally measured coupling constants. The contribution of the spin-dipole (SD) term to the coupling constants was found to be negligible, and the diamagnetic and paramagnetic spin-orbit (DSO and PSO) terms cancelled each other, as in the case of J(H,H). Calculation solely of the Fermi contact (FC) term was found to be sufficient to provide good estimates of the coupling constants. In the second part of the work, the conformational equilibria and coupling constants in 2-bis(2- chloroethyl)amino-trans-octahydro-2H-1,3,2-benzoxazaphosphinine 2-oxide and its 3-methyl derivative were studied. DFT methods failed in predicting the relative stabilities of the conformations but yielded good geometries and coupling constants. Optimization of the conformations at the Moller-Plesset second-order perturbation theory (MP2) level resulted in energy differences compatible with previous experimental observations. ((C) Wiley-VCH Verlag GmbH \& Co. KGaA, 69451 Weinheim, Germany, 2004)}, language = {en} } @article{YenesewMushibeIndulietal.2005, author = {Yenesew, Abiy and Mushibe, E. K. and Induli, M. and Derese, Solomon and Midiwo, Jacob O. and Kabaru, Jacques M. and Heydenreich, Matthias and Koch, Andreas and Peter, Martin G.}, title = {7a-O-methyldeguelol, a modified rotenoid with an open ring-C, from the roots of Derris trifoloata}, issn = {0031-9422}, year = {2005}, abstract = {From the acetone extract of the roots of Derris trifoliata an isollavonoid derivative, named 7a-O- methyldeguelol, a modified rotenoid with an open ring-C, representing a new sub-class of isollavonoids (the sub-class is here named as rotenoloid), was isolated and characterised. In addition, the known rotenoids, rotenone, deguelin and alpha-toxicarol, were identified. The structures were determined on the basis of spectroscopic evidence. Rotenone and deguelin were identified as the larvicidal principles of the acetone extract of the roots of Derris trifoliata. (c) 2005 Elsevier Ltd. All rights reserved}, language = {en} } @article{MarcoDeyouGruhonjicetal.2017, author = {Marco, Makungu and Deyou, Tsegaye and Gruhonjic, Amra and Holleran, John and Duffy, Sandra and Heydenreich, Matthias and Firtzpatrick, Paul A. and Landberg, Goran and Koch, Andreas and Derese, Solomon and Pelletier, Jerry and Avery, Vicky M. and Erdelyi, Mate and Yenesew, Abiy}, title = {Pterocarpans and isoflavones from the root bark of Millettia micans and of Millettia dura}, series = {Phytochemistry letters}, volume = {21}, journal = {Phytochemistry letters}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1874-3900}, doi = {10.1016/j.phytol.2017.07.012}, pages = {216 -- 220}, year = {2017}, language = {en} } @article{KochStamboliyskaMikhovaetal.2019, author = {Koch, Andreas and Stamboliyska, Bistra and Mikhova, Bozhana and Breznica-Selmani, Pranvera and Mladenovska, Kristina and Popovski, Emil}, title = {Calculations of C-13 NMR chemical shifts and F-C coupling constants of ciprofloxacin}, series = {Magnetic resonance in chemistry}, volume = {57}, journal = {Magnetic resonance in chemistry}, number = {4}, publisher = {Wiley}, address = {Hoboken}, issn = {0749-1581}, doi = {10.1002/mrc.4827}, pages = {75 -- 84}, year = {2019}, abstract = {Ciprofloxacin is a widely used fluoroquinolone antibiotic. In this work, a comprehensive evaluation of MP2 and DFT with different functionals and basis sets was carried out to select the most suitable level of theory for the study of the NMR properties of ciprofloxacin. Their relative predictive capabilities were evaluated comparing the theoretically predicted and experimental spectral data. Our computational results indicated that in contrast to the solid state, the molecule of ciprofloxacin does not exist as a zwitterion in gaseous state. The results of the calculations of the chemical shifts most close to the experimental were obtained with B3LYP/aug-cc-pVDZ. The F-C coupling constants were calculated systematically with different DFT methods and several basis sets. In general, the calculations of the coupling constants with the BHandH computational method including the applied in this work 6-311++G**, EPRII, and EPRIII basis sets showed a good reproducibility of the experimental values of the coupling constants.}, language = {en} } @article{StarkeKochKammeretal.2018, author = {Starke, Ines and Koch, Andreas and Kammer, Stefan and Holdt, Hans-J{\"u}rgen and M{\"o}ller, Heiko Michael}, title = {Electrospray mass spectrometry and molecular modeling study of formation and stability of silver complexes with diazaperylene and bisisoquinoline}, series = {Journal of mass spectrometry}, volume = {53}, journal = {Journal of mass spectrometry}, number = {5}, publisher = {Wiley}, address = {Hoboken}, issn = {1076-5174}, doi = {10.1002/jms.4071}, pages = {408 -- 418}, year = {2018}, abstract = {The complex formation of the following diazaperylene ligands (L) 1,12-diazaperylene 1, 1,1-bisisoquinoline 2, 2,11-disubstituted 1,12-diazaperylenes (alkyl=methyl, ethyl, isopropyl, 3, 5, 7), 3,3-disubstituted 1,1-bisisoquinoline (alkyl=methyl, ethyl, isopropyl, 4, 6, 8 and with R=phenyl, 11 and with pyridine 12), and the 5,8-dimethoxy-substituted diazaperylene 9, 6,6-dimethoxy-substituted bisisoquinoline 10 with AgBF4 was investigated. Collision-induced dissociation measurements were used to evaluate the relative stabilities of the ligands themselves and for the [1:1](+) complexes as well as for the homoleptic and heteroleptic silver [1:2](+) complexes in the gas phase. This method is very useful in rapid screening of the stabilities of new complexes in the gas phase. The influence of the spatial arrangement of the ligands and the type of substituents employed for the complexation were examined. The effect of the preorganization of the diazaperylene on the threshold activation voltages and thus of the relative binding energies of the different complexes are discussed. Density functional theory calculations were used to calculate the optimized structures of the silver complexes and compared with the stabilities of the complexes in the gas phase for the first time.}, language = {en} } @article{AwadConradKochetal.2010, author = {Awad, Duha Jawad and Conrad, Franziska and Koch, Andreas and Friedrich, Alwin and Poeppl, Andreas and Strauch, Peter}, title = {2,2'-Bipyridin-1,2-dithiolat Gemischtligand-Komplexe : Systhese, Charakterisierung und EPR-Spektroskopie}, issn = {0932-0776}, year = {2010}, abstract = {A series of new 2 2'-bipyridine/1 2-dithiolate transition metal complexes has been synthesised and characterised As 1,2-dithiolate ligands 1,2 dithiooxalate (dto) and 1 2-dithiosquarate (dtsq) were used It follows from the IR spectra that the multidentate dithiolate ligands coordinate exclusively via their sulfur atoms forming an MN2S2 coordination sphere The central metal ions (M) are Cu2+ Ni2+ Pd2+ Pt2+, and Zn2+ The complex [Cu-II(bpy)(dto)] could be studied by EPR spectroscopy and was measured as powder diamagnetically diluted in the isostructural [Ni-II(bpy)(dto)] host structure The spin density contribution calculated from the experimental parameters is compared with the electronic situation in the frontier orbitals namely in the semi occupied SOMO of the copper complex derived from quantum chemical calculations on different levels (EHT and DFT)}, language = {de} } @article{AwadConradKochetal.2010, author = {Awad, Duha Jawad and Conrad, Franziska and Koch, Andreas and Schilde, Uwe and Poeppl, Andreas and Strauch, Peter}, title = {1,10-phenanthroline-dithiolate mixed ligand transition metal complexes : synthesis, characterization and EPR spectroscopy}, issn = {0020-1693}, doi = {10.1016/j.ica.2010.01.021}, year = {2010}, abstract = {A series of new N2S2 mixed ligand transition metal complexes, where N-2 is phenanthroline and S-2 is 1,2- dithiooxalate (dto) or 1,2-dithiosquarate (dtsq), has been synthesized and characterized. IR spectra reveal that the 1,2- dithiolate ligands are coordinated via the sulfur atoms forming a N2S2 coordination sphere. The copper(II) complex [Cu(phen)(dto)] was studied by EPR spectroscopy as a diamagnetically diluted powder. The diamagnetic dilution resulted from doping of the copper complex into the isostructural host lattice of the nickel complex [Ni(phen)(dto)]. The electronic situation in the frontier orbitals of the copper complex calculated from the experimental data is compared to the results of EHT and DFT calculations. Furthermore, one side product, chlorobis(1,10-phenanthroline)copper(I) ethanol solvate hydrate [(phen)(2)CuCl]center dot C2H5OH center dot H2O, was formed by a reduction process and characterized by X-ray diffraction. In the crystal packing one-dimensional columns of dimers are formed, stabilized by significant pi-pi interactions.}, language = {en} } @article{AwadKochMickleretal.2012, author = {Awad, Duha Jawad and Koch, Andreas and Mickler, Wulfhard and Schilde, Uwe and Strauch, Peter}, title = {EPR spectroscopy of 4, 4 '-Bis(tert-butyl)-2, 2 '-bipyridine-1, 2-dithiolatocuprates(II) in host lattices with different coordination geometries}, series = {Zeitschrift f{\"u}r anorganische und allgemeine Chemie}, volume = {638}, journal = {Zeitschrift f{\"u}r anorganische und allgemeine Chemie}, number = {6}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {0044-2313}, doi = {10.1002/zaac.201100517}, pages = {965 -- 975}, year = {2012}, abstract = {A series of new heteroleptic MN2S2 transition metal complexes with M = Cu2+ for EPR measurements and as diamagnetic hosts Ni2+, Zn2+, and Pd2+ were synthesized and characterized. The ligands are N2 = 4, 4'-bis(tert-butyl)-2, 2'-bipyridine (tBu2bpy) and S2 =1, 2-dithiooxalate, (dto), 1, 2-dithiosquarate, (dtsq), maleonitrile-1, 2-dithiolate, or 1, 2-dicyanoethene-1, 2-dithiolate, (mnt). The CuII complexes were studied by EPR in solution and as powders, diamagnetically diluted in the isostructural planar [NiII(tBu2bpy)(S2)] or[PdII(tBu2bpy)(S2)] as well as in tetrahedrally coordinated[ZnII(tBu2bpy)(S2)] host structures to put steric stress on the coordination geometry of the central CuN2S2 unit. The spin density contributions for different geometries calculated from experimental parameters are compared with the electronic situation in the frontier orbital, namely in the semi-occupied molecular orbital (SOMO) of the copper complex, derived from quantum chemical calculations on different levels (EHT and DFT). One of the hosts, [NiII(tBu2bpy)(mnt)], is characterized by X-ray structure analysis to prove the coordination geometry. The complex crystallizes in a square-planar coordination mode in the monoclinic space group P21/a with Z = 4 and the unit cell parameters a = 10.4508(10) angstrom, b = 18.266(2) angstrom, c = 12.6566(12) angstrom, beta = 112.095(7)degrees. Oxidation and reductions potentials of one of the host complexes, [Ni(tBu2bpy)(mnt)], were obtained by cyclovoltammetric measurements.}, language = {en} } @article{KolocourisZervosDeProftetal.2011, author = {Kolocouris, Antonios and Zervos, Nikolaos and De Proft, Frank and Koch, Andreas}, title = {Improper Hydrogen Bonded Cyclohexane C-H-ax center dot center dot center dot Y-ax Contacts theoretical predictions and experimental Evidence from H-1 NMR Spectroscopy of Suitable Axial Cyclohexane Models}, series = {The journal of organic chemistry}, volume = {76}, journal = {The journal of organic chemistry}, number = {11}, publisher = {American Chemical Society}, address = {Washington}, issn = {0022-3263}, doi = {10.1021/jo102353f}, pages = {4432 -- 4443}, year = {2011}, abstract = {C-H-ax center dot center dot center dot Y-ax are a textbook prototype of steric hindrance in organic chemistry. The nature of these contacts is investigated in this work. MP2/6-31+G(d,p) calculations predicted the presence of improper hydrogen bonded C-H-ax center dot center dot center dot Y-ax of different strength in substituted cyclohexane rings. To support the theoretical predictions with experimental evidence, several synthetic 2-substituted adamantane analogues (1-24) with suitable improper H-bonded C-H-ax center dot center dot center dot Y-ax contacts of different strength were used as models of a substituted cyclohexane ring. The H-1 NMR signal separation, Delta delta(gamma-CH2), within the cyclohexane ring gamma-CH(2)s is raised when the MP2/6-31+G(d,p) calculated parameters, reflecting the strength of the H-bonded C-H-ax center dot center dot center dot Y-ax contact, are increased. In molecules with enhanced improper H-bonded contacts C-H-ax center dot center dot center dot Y-ax, like those having sterically crowded contacts (Y-ax = t-Bu) or contacts including considerable electrostatic attractions (Y-ax = O-C or O=C) the calculated DFT steric energies of the gamma-axial hydrogens are considerably reduced reflecting their electron cloud compression. The results suggest that the proton H-ax electron cloud compression, caused by the C-H-ax center dot center dot center dot Y-ax contacts, and the resulting increase in Delta delta(gamma-CH2) value can be effected not just from van der Waals spheres compression, but more generally from electrostatic attraction forces and van der Waals repulsion, both of which are improper H-bonding components.}, language = {en} } @phdthesis{Koch2001, author = {Koch, Andreas}, title = {Quantenchemische Untersuchungen von Tautomeriegleichgewichten und von Rotationsbarrieren um partielle C,N- Doppelbindungen}, pages = {115 S.}, year = {2001}, language = {de} } @article{KalliesKochMitzner1997, author = {Kallies, Bernd and Koch, Andreas and Mitzner, Rolf}, title = {Competitive resonance at the carbonyl group as visualized by the natural bond orbital analysis}, year = {1997}, language = {en} } @article{MuivaMutisyaMachariaHeydenreichetal.2014, author = {Muiva-Mutisya, Lois and Macharia, Bernard and Heydenreich, Matthias and Koch, Andreas and Akala, Hoseah M. and Derese, Solomon and Omosa, Leonidah K. and Yusuf, Amir O. and Kamau, Edwin and Yenesew, Abiy}, title = {6 alpha-Hydroxy-alpha-toxicarol and (+)-tephrodin with antiplasmodial activities from Tephrosia species}, series = {Phytochemistry letters}, volume = {10}, journal = {Phytochemistry letters}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1874-3900}, doi = {10.1016/j.phytol.2014.09.002}, pages = {179 -- 183}, year = {2014}, abstract = {The CH2Cl2/MeOH (1: 1) extract of the roots of Tephrosia villosa showed good antiplasmodial activity against the chloroquine-sensitive (D6) and chloroquine-resistant (W2) strains of Plasmodium falciparum with IC50 values of 3.1 +/- 0.4 and 1.3 +/- 0.3 mu g/mL, respectively. Chromatographic separation of the extract yielded a new rotenoid, 6 alpha-hydroxy-alpha-toxicarol, along with five known rotenoids, (rotenone, deguelin, sumatrol, 12 alpha-hydroxy-alpha-toxicarol and villosinol). Similar treatment of the extract of the stem of Tephrosia purpurea (IC50 = 4.1 +/- 0.4 and 1.9 +/- 0.2 mu g/mL against D6 and W2 strains of P. falciparum, respectively) yielded a new flavone having a unique substituent at C-7/C-8 [trivial name (+)-tephrodin], along with the known flavonoids tachrosin, obovatin methyl ether and derrone. The relative configuration and the most stable conformation in (+)-tephrodin was determined by NMR and theoretical energy calculations. The rotenoids and flavones tested showed good to moderate antiplasmodial activities (IC50 = 9 +/- 23 mu M). Whereas the cytotoxicity of rotenoids is known, the flavones (+)-tephrodin and tachrosin did not show significant cytotoxicity (IC50 > 100 mu M;) against mammalian African monkey kidney (vero) and human larynx carcinoma (HEp2) cell lines. (C) 2014 Phytochemical Society of Europe. Published by Elsevier B.V. All rights reserved.}, language = {en} } @article{MuivaMutisyaAtilawHeydenreichetal.2018, author = {Muiva-Mutisya, Lois M. and Atilaw, Yoseph and Heydenreich, Matthias and Koch, Andreas and Akala, Hoseah M. and Cheruiyot, Agnes C. and Brown, Matthew L. and Irungu, Beatrice and Okalebo, Faith A. and Derese, Solomon and Mutai, Charles and Yenesew, Abiy}, title = {Antiplasmodial prenylated flavanonols from Tephrosia subtriflora}, series = {Natural Product Research}, volume = {32}, journal = {Natural Product Research}, number = {12}, publisher = {Routledge, Taylor \& Francis Group}, address = {Abingdon}, issn = {1478-6419}, doi = {10.1080/14786419.2017.1353510}, pages = {1407 -- 1414}, year = {2018}, abstract = {The CH2Cl2/MeOH (1:1) extract of the aerial parts of Tephrosia subtriflora afforded a new flavanonol, named subtriflavanonol (1), along with the known flavanone spinoflavanone B, and the known flavanonols MS-II (2) and mundulinol. The structures were elucidated by the use of NMR spectroscopy and mass spectrometry. The absolute configuration of the flavanonols was determined based on quantum chemical ECD calculations. In the antiplasmodial assay, compound 2 showed the highest activity against chloroquine-sensitive Plasmodiumfalciparum reference clones (D6 and 3D7), artemisinin-sensitive isolate (F32-TEM) as well as field isolate (KSM 009) with IC50 values 1.4-4.6M without significant cytotoxicity against Vero and HEp2 cell lines (IC50>100M). The new compound (1) showed weak antiplasmodial activity, IC50 12.5-24.2M, but also showed selective anticancer activity against HEp2 cell line (CC50 16.9M). [GRAPHICS] .}, language = {en} } @article{DeyouMarcoHeydenreichetal.2017, author = {Deyou, Tsegaye and Marco, Makungu and Heydenreich, Matthias and Pan, Fangfang and Gruhonjic, Amra and Fitzpatrick, Paul A. and Koch, Andreas and Derese, Solomon and Pelletier, Jerry and Rissanen, Kari and Yenesew, Abiy and Erdelyi, Mate}, title = {Isoflavones and Rotenoids from the Leaves of Millettia oblata ssp teitensis}, series = {Journal of natural products}, volume = {80}, journal = {Journal of natural products}, publisher = {American Chemical Society}, address = {Washington}, issn = {0163-3864}, doi = {10.1021/acs.jnatprod.7b00255}, pages = {2060 -- 2066}, year = {2017}, abstract = {A new isoflavone, 8-prenylmilldrone (1), and four new rotenoids, oblarotenoids A-D (2-5), along with nine known compounds (6-14), were isolated from the CH2Cl2/CH3OH (1:1) extract of the leaves of Millettia oblata ssp. teitensis by chromatographic separation. The purified compounds were identified by NMR spectroscopic and mass spectrometric analyses, whereas the absolute configurations of the rotenoids were established on the basis of chiroptical data and in some cases by single-crystal X-ray crystallography. Maximaisoflavone J (11) and oblarotenoid C (4) showed weak activity against the human breast cancer cell line MDA-MB-231 with IC50 values of 33.3 and 93.8 mu M, respectively.}, language = {en} } @article{KleinpeterKoch2012, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Spatial magnetic properties subject to lone pair and pi electron delocalization in benzenoid and quinoid structures : are quinoid tautomers really nonaromatic?}, issn = {1551-7004}, year = {2012}, abstract = {The spatial magnetic properties, through-space NMR shieldings (TSNMRS), of benzenoid and quinoid tautomeric structures such as benzodifurantrione and phenazine-type molecules have been calculated using the GIAO perturbation method employing the nucleus independent chemical shift (NICS) concept of Paul von Rague Schleyer and visualized as iso- chemical-shielding surfaces (ICSS) of various size and direction. The TSNMRS values were employed to quantify and visualize the partial aromaticity of the studied compounds. In the case of the surprisingly more stable quinoid tautomers, the aromaticity-synonymous with stability due to the conjugation of p electrons and lone pairs-was not found to be particularly reduced.}, language = {en} } @article{KleinpeterKoch2012, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Spatial magnetic properties subject to lone pair and pi electron delocalization in benzenoid and quinoid structures are quinoid tautomers really nonaromatic?}, series = {Arkivoc : free online journal of organic chemistry}, journal = {Arkivoc : free online journal of organic chemistry}, publisher = {ARKAT}, address = {Gainesville}, issn = {1551-7004}, pages = {94 -- 108}, year = {2012}, abstract = {The spatial magnetic properties, through-space NMR shieldings (TSNMRS), of benzenoid and quinoid tautomeric structures such as benzodifurantrione and phenazine-type molecules have been calculated using the GIAO perturbation method employing the nucleus independent chemical shift (NICS) concept of Paul von Rague Schleyer and visualized as iso-chemical-shielding surfaces (ICSS) of various size and direction. The TSNMRS values were employed to quantify and visualize the partial aromaticity of the studied compounds. In the case of the surprisingly more stable quinoid tautomers, the aromaticity-synonymous with stability due to the conjugation of p electrons and lone pairs-was not found to be particularly reduced.}, language = {en} } @article{KleinpeterKoch2018, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Paramagnetic ring current effects in anti-aromatic structures subject to substitution/annelation quantified by spatial magnetic properties (TSNMRS)}, series = {Tetrahedron}, volume = {74}, journal = {Tetrahedron}, number = {7}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2017.12.020}, pages = {700 -- 710}, year = {2018}, abstract = {The spatial magnetic properties, through-space NMR shieldings (TSNMRS), of the typically anti-aromatic cyclopentadienyl cation, cyclobutadiene, pentalene, s-indacene and of substituted/annelated analogues of the latter structures have been calculated using the CIAO perturbation method employing the nucleus independent chemical shift (NICS) concept and visualized as iso-chemical-shielding surfaces (ICSS) of various size and direction. The TSNMRS values were employed to visualize and quantify the dia(para) magnetic ring current effects in the studied compounds. The interplay of dia(para)magnetic ring current effects due to substitution/annelation caused by heavy exo-cyclic n,pi-electron delocalization can be qualified.}, language = {en} } @article{KochThomasKleinpeter1997, author = {Koch, Andreas and Thomas, Steffen and Kleinpeter, Erich}, title = {Ab-initio study, semi-empirical calculation and NMR spectroscopy of keto-enol tautomerism of triazolopyrimidines}, year = {1997}, language = {en} } @article{ShainyanUshakovMeshcheryakovetal.2007, author = {Shainyan, Bagrat A. and Ushakov, Igor A. and Meshcheryakov, Vladimir I. and Schilde, Uwe and Koch, Andreas and Kleinpeter, Erich}, title = {The stereodynamics of 3,5-bis(trifluoromethylsulfonyl)-1,3,5-oxadiazinane and 1,3,5- tris(trifluoromethylsulfonyl)-1,3,5-triazinane- an experimental and theoretical study}, doi = {10.1016/j.tet.2007.09.041}, year = {2007}, abstract = {Multinuclear dynamic NMR spectroscopy of 3,5-bis(trifluoromethylsulfonyl)-1,3,5-oxadiazinane (3) revealed the existence of two conformers with differently oriented CF3 groups with respect to the ring, and two dynamic processes: ring inversion and restricted rotation about the N-S bond. Two transition states connecting the two conformers and corresponding to clockwise and counterclockwise rotations about the N-S bond were found; the calculated activation barriers of about 12 kcal/mol are in excellent agreement with those measured experimentally for the related molecule 1,3,5-tris(trifluoromethylsulfonyl)-1,3,5-triazinane (1). X-ray analysis proved the existence of the symmetric isomer of 3, which is the minor isomer in solutions but the only one in the crystal due to packing effects. The normal Perlin effect (JCHax < JCHeq)observed for 2(6)-CH2 in 3, whereas the reversed Perlin effect was found for the 4-CH2 group in 3 as well as for all CH2 groups in 1 both experimentally and theoretically. The latter effect in compounds 1, 3, and 1- (methylsulfonyl)-3,5-bis(trifluoromethylsulfonyl)-1,3,5-triazinane (2) can be considered as a genuine reverse Perlin effect since larger values of 1JCH are observed for longer C-H bonds.}, language = {en} } @article{KleinpeterKoch2019, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Is the term "Carbene" justified for remote N-heterocyclic carbenes (r-NHCs) and abnormal N-heterocyclic carbenes (aNHCs/MICs)?}, series = {Tetrahedron}, volume = {75}, journal = {Tetrahedron}, number = {11}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2019.02.005}, pages = {1548 -- 1554}, year = {2019}, abstract = {The spatial magnetic properties, through-space NMR shieldings (TSNMRS), of typical N-heterocyclic carbenes NHCs, r-NHCs, a-NHCs and MICs have been calculated using the GIAO perturbation method employing the nucleus independent chemical shift (NICS) concept and visualized as iso-chemical-shielding surfaces (ICSS) of various size and direction. Prior to that both structures and 13C chemical shifts were calculated and in case of isolated carbenes the computed δ(13C)/ppm values compared (as a quality criterion for obtained structures) with the experimental ones. The TSNMRS values of the studied carbenes, which are in mesomeric equilibrium with zwitterionic (ylide/betaine/mesoionic) resonance contributors, are employed to qualify and quantify the present electronic structure and if the term carbene is still justified to denote the compounds studied. The results, thus obtained from spatial magnetic properties (TSNMRS), are compared with the geometry of the compounds, the corresponding WIBERG's bond index values, and the 13C chemical shifts especially of the carbene electron-deficient centre.}, language = {en} } @article{KleinpeterKoch2023, author = {Kleinpeter, Erich and Koch, Andreas}, title = {The multiple bond character of the carbon-boron bond in boron trapped N-heterocyclic carbenes (NHCs) and cyclic(alkyl)(amino) carbenes (CAACs) on the magnetic criterion}, series = {Tetrahedron}, volume = {140}, journal = {Tetrahedron}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2023.133469}, pages = {13}, year = {2023}, abstract = {Geometry, 11B, 13C chemical shifts and the spatial magnetic properties (Through-Space NMR Shieldings -TSNMRS) of both cations and anions of boron-trapped N-heterocyclic carbenes (NHCs) and cyclic (alkyl)(amino)carbenes (CAACs) and of the corresponding diborane/diborene/diboryne dis-carbene adducts have been calculated using the GIAO perturbation method employing the nucleus independent chemical shift (NICS) concept; the TSNMRS results are visualized as iso-chemical-shielding surfaces (ICSS) of various size and direction. The ICSS of the TSNMRS (actually the anisotropy effects measurable in 1H NMR spectroscopy) are employed to qualify and quantify the present multiple bond character of the Carbene-Boron bond in the trapped NHCs and CAACs. Results are confirmed by bond length and 11B/13C chemical shift variations. Thus the partial multiple bond character of the Carbene-Boron bond cannot be expressed by the arrow of weak, much longer dative bonds and should be omitted as in other covalent lone pair-it or triel bonds. \& COPY; 2023 Elsevier Ltd. All rights reserved.}, language = {en} } @article{KleinpeterKoch2020, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Bent Allenes or Di-1,3-betaines-An Answer Given on the Magnetic Criterion}, series = {The journal of physical chemistry : A, Molecules, spectroscopy, kinetics, environment \& general theory}, volume = {124}, journal = {The journal of physical chemistry : A, Molecules, spectroscopy, kinetics, environment \& general theory}, number = {16}, publisher = {American Chemical Society}, address = {Washington}, issn = {1089-5639}, doi = {10.1021/acs.jpca.0c01392}, pages = {3180 -- 3190}, year = {2020}, abstract = {The spatial magnetic properties, through-space NMR shieldings (TSNMRS), of bent allene 1, the corresponding C-extended 1,3-butadiene derivative 2, and a number of related compounds 3 -20 have been calculated using the gauge-independent atomic orbital perturbation method, employing the nucleus-independent chemical shift concept and visualized as isochemical shielding surfaces of various sizes and directions. Prior to that, both structures and C-13 chemical shifts were calculated and compared with available experimental bond lengths and delta(C-13)/ppm values (also, as a quality criterion for the computed structures). Bond lengths, the delta(C-13)/ppm, and the TSNMRS values are employed to qualify and quantify the electronic structure of the studied compounds in terms of dative or classical electron-sharing bonds.}, language = {en} } @article{KleinpeterKoch2016, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Y-aromaticity - existing: yes or no? An answer given on the magnetic criterion (TSNMRS)}, series = {Tetrahedron}, volume = {72}, journal = {Tetrahedron}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2016.02.020}, pages = {1675 -- 1685}, year = {2016}, abstract = {The spatial magnetic properties (Through Space NMR Shieldings - TSNMRS) of a number of Y-shaped structures possessing 4n+2 pi-electrons (i.a. the trimethylenemethane ions TMM2+, TMM2-, the guanidinium cation, substituted and hetero analogues) have been computed, visualized as Isochemical Shielding Surfaces (ICSS) of various size and direction, were examined subject to present Y-aromaticity and the results compared with energetic and geometric criteria obtained already. (C) 2016 Elsevier Ltd. All rights reserved.}, language = {en} } @article{BelasriTopalHeydenreichetal.2020, author = {Belasri, Khadija and Topal, Leila and Heydenreich, Matthias and Koch, Andreas and Kleinpeter, Erich and Fulop, Ferenc and Szatmari, Istvan}, title = {Synthesis and conformational analysis of naphthoxazine-fused phenanthrene derivatives}, series = {Molecules}, volume = {25}, journal = {Molecules}, number = {11}, publisher = {MDPI}, address = {Basel}, issn = {1420-3049}, doi = {10.3390/molecules25112524}, pages = {15}, year = {2020}, abstract = {The synthesis of new phenanthr[9,10-e][1,3]oxazines was achieved by the direct coupling of 9-phenanthrol with cyclic imines in the modified aza-Friedel-Crafts reaction followed by the ring closure of the resulting bifunctional aminophenanthrols with formaldehyde. Aminophenanthrol-type Mannich bases were synthesised and transformed to phenanthr[9,10-e][1,3]oxazines via [4 + 2] cycloaddition. Detailed NMR structural analyses of the new polyheterocycles as well as conformational studies including Density Functional Theory (DFT) modelling were performed. The relative stability of ortho-quinone methides (o-QMs) was calculated, the geometries obtained were compared with the experimentally determined NMR structures, and thereby, the regioselectivity of the reactions has been assigned.}, language = {en} } @article{HeydenreichKochSzatmarietal.2008, author = {Heydenreich, Matthias and Koch, Andreas and Szatm{\´a}ri, Istv{\´a}n and Fulop, Ferenc and Kleinpeter, Erich}, title = {Synthesis and conformational analysis of naphth[1,2-e][1,3]oxazino[4,3-a][1,3]isoquinoline and naphth[2,1- e][1,3]oxazino[4,3-a]isoquinoline derivatives}, doi = {10.1016/j.tet.2008.05.025}, year = {2008}, abstract = {Through the cyclization of 1-(;-hydroxynaphthyl)-1,2,3,4-tetrahydroisoquinoline and 1-(;- hydroxynaphthyl)-1,2,3,4-tetrahydroisoquinoline with formaldehyde, phosgene, p-nitrobenzaldehyde or p-chlorophenyl isothiocyanate, 8-substituted 10,11-dihydro-8H,15bH-naphth[1,2-e][1,3]oxazino[4,3-a]isoquinolines (3 and 4) and 10,11- dihydro-8H,15bH-naphth[2,1-e][1,3]oxazino[4,3-a]isoquinolines (15 and 16) were prepared. Conformational analysis of both the piperidine and the 1,3-oxazine moieties of these heterocycles by NMR spectroscopy and an accompanying theoretical study revealed that these two conformationally flexible six-membered ring moieties prefer twisted chair conformers.}, language = {en} } @article{CsuetoertoekiSzatmariKochetal.2012, author = {Cs{\"u}t{\"o}rt{\"o}ki, Renata and Szatmari, Istvan and Koch, Andreas and Heydenreich, Matthias and Kleinpeter, Erich and Fulop, Ferenc}, title = {Syntheses and conformational analyses of new naphth[1,2-e][1,3]oxazino[3,2-c] quinazolin-13-ones}, series = {Tetrahedron}, volume = {68}, journal = {Tetrahedron}, number = {24}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2012.04.026}, pages = {4600 -- 4608}, year = {2012}, abstract = {The syntheses of naphth[1,2-e][1,3]oxazino[3,2-c]quinazolin-13-one derivatives (3a-f) were achieved by the solvent-free heating of benzyloxycarbonyl-protected intermediates (2a-f) with MeONa. For intermediates 2a-f, prepared by the reactions of substituted aminonaphthols with benzyl N-(2-formylphenyl)carbamate, not only the expected trans ring form B and chain form A(1), but also the rearranged chain form A(2) as a new tautomer were detected in DMSO at room temperature. The quantity of A(2) in the tautomeric mixture was changed with time. Conformational analyses of the target heterocycles 3a-f by NMR spectroscopy and accompanying theoretical calculations at the DFT level of theory revealed that the oxazine ring preferred a twisted chair conformation and the quinazolone ring was planar. Besides the conformations, both the configurations at C-7a and C-15 and the preferred rotamers of the 1-naphthyl substituent at C-15 were assigned, which allowed evaluation of the aryl substituent-dependent steric hindrance in this part of the molecules. Configurational assignments were corroborated by quantifying the ring current effect of 15-aryl in terms of spatial NICS.}, language = {en} } @article{KleinpeterKochSchulzetal.2014, author = {Kleinpeter, Erich and Koch, Andreas and Schulz, Stefanie and Wacker, Philipp}, title = {Interplay of para- and diatropic ring currents [(anti)aromaticity] of macrocyclic rings subject to conformational influences, further annelation and hydrogenation of aromatic ring moieties}, series = {Tetrahedron}, volume = {70}, journal = {Tetrahedron}, number = {48}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2014.10.018}, pages = {9230 -- 9239}, year = {2014}, abstract = {The spatial magnetic properties (Through Space NMR Shieldings-TSNMRS) of a variety of porphyrins, hemiporphyrazines and tetraoxo[8]circulenes have been computed, visualized as Iso-chemical Shielding Surfaces (ICSS) of various size and direction, and were examined subject to the interplay of present (para)-diatropic ring currents [(anti)aromaticity] and influences on the latter property originating from the macrocyclic ring conformation, further annelation and partial to complete hydrogenation of aromatic ring moieties. Caution seems to be indicated when concluding from a single NICS parameter to present (para)diatropic ring currents [(anti)aromaticity]. (C) 2014 Elsevier Ltd. All rights reserved.}, language = {en} } @article{HeydenreichKochKovacsetal.2004, author = {Heydenreich, Matthias and Koch, Andreas and Kovacs, J. and Toth, G. and Kleinpeter, Erich}, title = {Electronic influences on (3)J(C,H) coupling constants via -S-, -S(O)- and -SO2--: their determination, calculation and comparison of detection methods}, issn = {0749-1581}, year = {2004}, abstract = {(3)J(C,H) coupling constants via a sulfur atom in two series of compounds, both including a sulfide, a sulfoxide and a sulfone, were detected experimentally and calculated by quantum mechanical methods. In the first series (1-3) the coupling between a hydrogen, bonded to an Sp(3) carbon, and an Sp(2) carbon is treated; the second series (4- 6) deals with the coupling between a hydrogen, bonded to an Sp3 carbon, and an Sp3 carbon. Different pulse sequences (broadband HMBC, SelJres, 1D HSQMBC, J-HMBC-2, selective J-resolved long-range experiment and IMPEACH-MBC) proved to be useful in determining the long-range (3)J(C,H) coupling constants. However, the dynamic behaviour of two of the compounds (4 and 6) led to weighted averages of the two coupling constants expected (concerning equatorial and axial positions of the corresponding hydrogens). DFT calculations proved to be useful to calculate not only the (3)J(C,H) coupling constants but also the different contributions of FC, PSO, DSO and SD terms; the calculation of the Fermi contact term (FC) was found to be sufficient for the correct estimation of (3)J(C,H) coupling constants. Copyright (C) 2004 John Wiley Sons, Ltd}, language = {en} } @article{KochMikhovaKleinpeter2004, author = {Koch, Andreas and Mikhova, Bozhana and Kleinpeter, Erich}, title = {Ab initio MP2/GIAO/NBO study of the delta-syn-axial effect in C-13 NMR spectroscopy}, issn = {0022-2860}, year = {2004}, abstract = {The C-13 chemical shifts of 20 rigid bicyclic compounds have been calculated with ab initio HF and MP2 methods. The calculations showed very good reproducibility of the experimental values. The molecular orbital interactions in the rigid, nearly planar delta-syn-axial fragments in the isomeric groups of norbornane derivatives 1.x-4.x were studied in detail and were employed to explain the deshielding delta-syn-axial effect in C-13 NMR spectroscopy. (C) 2004 Elsevier B.V. All rights reserved}, language = {en} } @article{SzatmariMartinekLazaretal.2004, author = {Szatmari, Istvan and Martinek, T. A. and Lazar, L. and Koch, Andreas and Kleinpeter, Erich and Neuvonen, Kari and Fulop, Ferenc}, title = {Stereoelectronic effects in ring-chain tautomerism of 1,3-diarylnaphth[1,2-e][1,3]oxazines and 3-alkyl-1- arylnaphth[1,2-e][1,3]oxazines}, issn = {0022-3263}, year = {2004}, abstract = {The disubstitution effects of X and Y in 1-(Y-phenyl)-3-(X-phenyl)-2,3-dihydro-1H-naphth[1,2-e][1,3]oxazines on the ring-chain tautomerism, the delocalization of the nitrogen lone pair (anomeric effect), and the C-13 NMR chemical shifts were analyzed by using multiple linear regression analysis. Study of the three-component equilibrium B reversible arrow A reversible arrow C revealed that the chain reversible arrow trans (A reversible arrow B) equilibrium constants are significantly influenced by the inductive effect (sigma(F)) of substituent Y on the 1-phenyl ring. In contrast, no significant substituent dependence on Y was observed for the chain reversible arrow cis (A reversible arrow C) equilibrium. There was an analogous dependence for the epimerization (C reversible arrow B) constants of 1-(Y-phenyl)-3- alkyl-2,3-dihydro-1H-naphth[1,2-e] [1,3]oxazines. With these model compounds, significant overlapping energies of the nitrogen lone pair was observed by NBO analysis in the trans forms B (to sigma*(C1-C1'), sigma*(C1-C10b), and sigma*(C3-O4)) and in the cis forms C (to sigma*(C1-H), sigma*(C1-C10b), and sigma*(C3-O4)). The effects of disubstitution revealed some characteristic differences between the cis and trans isomers. However, the results do not suggest that the anomeric effect predominates in the preponderance of the trans over the cis isomer. When the C-13 chemical shift changes induced Y by substituents X and Y (SCS) were subjected to multiple linear regression analysis, negative rho(F)(Y) and rho(F)(X) values were observed at C-1 and C-3 for both the cis and trans isomers. In contrast, the positive rho(R)(Y) values at C-1 and the negative rho(R)(X) values at C-3 observed indicated the contribution of resonance structures f (rho(R) > 0) and g (rho(R) < 0), respectively. The classical double bond-no-bond resonance structures proved useful in explaining the substituent sensitivities of the donation energies and the behavior of the SCS values}, language = {en} } @article{KleinpeterHilfertKoch2000, author = {Kleinpeter, Erich and Hilfert, Liane and Koch, Andreas}, title = {GIAO-HF/DFT calculation of C-13 and N-15 chemical shifts for studying tautomerism and intramolecular hydrogen bonding in 2,3-disubstituted quinoxalines}, year = {2000}, language = {en} } @article{SchollKochHenningetal.1999, author = {Scholl, S. and Koch, Andreas and Henning, Dietrich and Kempter, Gerhard and Kleinpeter, Erich}, title = {The influence of structure and lipophilicity of hydantoin derivatives on anticonvulsant activity}, year = {1999}, language = {en} } @article{KleinpeterHeydenreichWolleretal.1998, author = {Kleinpeter, Erich and Heydenreich, Matthias and Woller, Jochen and Wolf, Gunter and Koch, Andreas and Kempter, Gerhard and Pihlaja, Kalevi}, title = {Configuration and stereodynamics of exo/endoisomeric push-pull alkenes of pentadiene structure}, year = {1998}, language = {en} } @article{KleinpeterHeydenreichKalderetal.1997, author = {Kleinpeter, Erich and Heydenreich, Matthias and Kalder, L. and Koch, Andreas and Henning, Dietrich and Kempter, Gerhard}, title = {NMR spectroscopic and theoretical structural analysis of 5,5-disubstituted hydantoins in solution}, year = {1997}, language = {en} } @article{KleinpeterHilfertKoch1999, author = {Kleinpeter, Erich and Hilfert, Liane and Koch, Andreas}, title = {NMR spectroscopic and ab-initio MO study of sterically hindered 2,3-disubstituted quinoxalines}, year = {1999}, language = {en} } @article{HeydenreichKochRistauetal.1998, author = {Heydenreich, Matthias and Koch, Andreas and Ristau, Thomas and Knoll, Susanne and Heinicke, Jochen and Sieler, Joachim and Niemitz, Matthias and M{\"u}hlst{\"a}dt, Manfred and Kleinpeter, Erich}, title = {Conformational analysis of sulfur-containing heterocycles ; part I: synthesis and structural determination of diastereomerically pure 4,6-bis(phenoxymethyl)-1,2,5-trithiepanes}, year = {1998}, language = {en} } @article{HeydenreichKochKleinpeteretal.1997, author = {Heydenreich, Matthias and Koch, Andreas and Kleinpeter, Erich and Zimmermann, Thomas}, title = {Dynamic NMR study of the flexibility of 2-amino-3-aroyl-4,6-diaryl-pyrylium salts}, issn = {0937-0633}, doi = {10.1007/s002160050205}, year = {1997}, language = {en} } @article{KleinpeterKochFischeretal.1997, author = {Kleinpeter, Erich and Koch, Andreas and Fischer, G. and Askolin, C.-P.}, title = {13 C NMR, 15 N NMR and quantum-chemical study of the tautomerism of 2-substituted 5-ME-7-OH-1,2,4-triazolo[1,5- a]pyrimidines}, year = {1997}, language = {en} } @article{KochKleinpeter1997, author = {Koch, Andreas and Kleinpeter, Erich}, title = {Study of the tautomerism by experimentally and theoretically estimated 13C and 15N chemical shifts}, year = {1997}, language = {en} } @article{KochKleinpeter1997, author = {Koch, Andreas and Kleinpeter, Erich}, title = {Restricted rotation about particial C, N Double Bond}, year = {1997}, language = {en} } @article{KleinpeterHeydenreichKalderetal.1997, author = {Kleinpeter, Erich and Heydenreich, Matthias and Kalder, L. and Koch, Andreas and Henning, Dietrich and Kempter, Gerhard and Benassi, Rois and Taddei, F.}, title = {NMR spectroscopic and theoretical structural analysis of 5,5-disubstituted hydantoins in solution}, year = {1997}, language = {en} } @article{KochStarkeKleinpeter1995, author = {Koch, Andreas and Starke, Ines and Kleinpeter, Erich}, title = {Conformational study of Dibenzo crown ethers and their complexation with Li+ and Na+}, year = {1995}, language = {en} } @article{KochKleinpeter1995, author = {Koch, Andreas and Kleinpeter, Erich}, title = {Ab-initio study and semiempirical calculations of keto-enol tautomerism of triazolopyrimidines}, year = {1995}, language = {en} } @article{KleinpeterKochHeydenreichetal.1995, author = {Kleinpeter, Erich and Koch, Andreas and Heydenreich, Matthias and Chatterjee, S. K. and Rudorf, Wolf-Dieter}, title = {Study of the pi-electron distribution in push-pull alkenes by 1H and 13C NMR spectroscopy, IV : the conformation and dynamic behaviour of substituted N-Phenyl-2,3-dihydro-4(1H)-pyridones}, year = {1995}, language = {en} } @article{StarkeKochHoldtetal.1995, author = {Starke, Ines and Koch, Andreas and Holdt, Hans-J{\"u}rgen and Kleinpeter, Erich}, title = {1H, 13C, and 15N NMR study of the solution structure of metabridged bis(benzo-15-crown-5-ether)s}, year = {1995}, language = {en} } @article{StarkeKochUhlemannetal.1995, author = {Starke, Ines and Koch, Andreas and Uhlemann, Erhard and Kleinpeter, Erich}, title = {Nuclear-magnetic-resonance studies and molecular modelling of the solution structure of some dibenzo crown- ethers and their complexes}, year = {1995}, language = {en} } @article{KleinpeterSzatmariLazaretal.2009, author = {Kleinpeter, Erich and Szatm{\´a}ri, Istv{\´a}n and L{\´a}z{\´a}r, L{\´a}szl{\´o} and Koch, Andreas and Heydenreich, Matthias and Fulop, Ferenc}, title = {Visualization and quantification of anisotropic effects on the 1H NMR spectra of 1,3-oxazino[4,3- alpha]isoquinolines - indirect estimates of steric compression}, issn = {0040-4020}, doi = {10.1016/j.tet.2009.07.038}, year = {2009}, abstract = {The anisotropic effects of the phenyl, alpha- and beta-naphthyl moieties in four series of 1,3-oxazino[4,3- a]isoquinolines on the H-1 chemical shifts of the isoquinoline protons were calculated by employing the Nucleus Independent Chemical Shift (NICS) concept and Visualized as anisotropic cones by a through-space NMR shielding grid. The signs and extents of these spatial effects on the H-1 chemical shifts of the isoquinoline protons were compared with the experimental H-1 NMR spectra. The differences between the experimental delta (H-1)/ppm values and the calculated anisotropic effects of the aromatic moieties are discussed in terms of the steric compression that occurs in the Compounds studied.}, language = {en} } @article{BoehmTomaszcikovaImrichetal.2009, author = {B{\"o}hm, Stanislav and Tomaszcikov{\´a}, Jana and Imrich, J{\´a}n and Danihel, Ivan and Kristian, Pavol and Koch, Andreas and Kleinpeter, Erich and Klika, Karel D.}, title = {Computational study to assign structure, tautomerism, E/Z and s-cis/s-trans isomerism, pi-delocalization, partial aromaticity, and the ring size of 1,3-thiazolidin-4-ones and 1,3-thiazin-4-ones formed from thiosemicarbazides}, issn = {0166-1280}, year = {2009}, abstract = {A set of structures encompassing 1-(9-acridinyl)thiosemicarbazide and its 2-methyl derivative together with their various tautomeric structures; the 5-membered ring 1,3-thiazolidin-4-one products resulting from the reaction of 1- (9-acridinyl)thiosemicarbazide and its 2-methyl derivative with dimethyl acetylenedicarboxylate (DMAD) together with the alternative 6-membered ring isomeric reaction products as well as other potential isomeric structures; and the 6- membered ring 1,3-thiazin-4-one product resulting from the reaction of 2-methyl-1-(9-acridinyl)thiosemicarbazide with methyl propiolate (MP) together with the alternative 5-membered ring isomeric reaction product were all extensively studied by molecular modeling calculations using DFT at the B3LYP/6-31G(d,p) level of theory. The ring-chain tautomerism of the thiosemicarbazides, the regio- and stereoselectivity of the reactions, the adopted conformations and E/Z configurations of the products, the prototropic tautomerism of all the compounds, and the reasons for the predominance of the s-cis conformation of the Z configuration of the 1,3-thiazolidin-4-one product in particular were all extensively analyzed. Comparison of the modeled structures were also made to the 1,3-thiazolidin-4-one and 1,3-thiazin-4-one structures of the methyl derivative as well as 1-(9-acridinyl)thiosemicarbazide available from X-ray crystallographic analysis. Tactics utilizing spectroscopic methods {IR frequencies (;) and NMR chemical shifts (;), scalar coupling constants (J), and NOEs (;)} in conjunction with molecular modeling calculations of the spectral parameters {frequency calculations (;) and NMR ; using the GIAO method and J by calculation of the Fermi contact term} were evaluated in terms of proving 5- or 6-membered ring formation.}, language = {en} } @article{SarodnickLinkerHeydenreichetal.2009, author = {Sarodnick, Gerhard and Linker, Torsten and Heydenreich, Matthias and Koch, Andreas and Starke, Ines and F{\"u}rstenberg, Sylvia and Kleinpeter, Erich}, title = {Quinoxalines XV : convenient synthesis and structural study of pyrazolo[1,5-alpha]quinoxalines}, issn = {0022-3263}, doi = {10.1021/Jo802398g}, year = {2009}, abstract = {A series of aryloxymethylquinoxaline oximes, hitherto unknown and synthesized from the corresponding aldehydes, afforded in only one step pyrazolo[1,5-;]quinoxalines in the presence of acetic anhydride at high temperatures. A formal [3,5]-sigmatropic rearrangement was proposed as the mechanistic rationale for this unprecedented transformation. Saponification with potassium hydroxide furnished the free phenol derivatives which were studied by NMR spectroscopy and accompanying theoretical DFT calculations, establishing intramolecular hydrogen bonding and the spatial magnetic properties. Additionally, mass spectrometric fragmentation was investigated by B/E-linked scans and collision-induced dissociation experiments. The fragmentation pattern devoted a new gas phase rearrangement process, which proved to be unique and characteristic for pyrazolo[1,5-;]quinoxalines.}, language = {en} } @article{SzatmariTothKochetal.2006, author = {Szatmari, Istvan and Toth, Diana and Koch, Andreas and Heydenreich, Matthias and Kleinpeter, Erich and Fulop, Ferenc}, title = {Study of the substituent-influenced anomeric effect in the ring-chain tautomerism of 1-alkyl-3-aryl-naphth[1,2- e][1,3]oxazines}, doi = {10.1002/ejoc.200600563}, year = {2006}, abstract = {The stabilities of the trans (B) and cis (C) tautomeric ring forms that are experimentally observed in the ring- chain tautomeric interconversion of 1-alkyl-3-aryl-2,3-dihydro-1H-naphth[1,2-e][1,3]oxazines has been investigated. Stability differences are explained by the analysis of the natural bond orbital results for the lone pairs of electrons that are on the heteroatoms in the oxazine ring system and by regression analysis of the calculated 13C NMR chemical shift values.}, language = {en} } @article{BalciKochKleinpeter2009, author = {Balci, Kubilay and Koch, Andreas and Kleinpeter, Erich}, title = {A theoretical IR spectroscopic study based on DFT calculations for free mn-15S(2)O(3) maleonitrile-dithiacrown ether compound}, issn = {0022-2860}, doi = {10.1016/j.molstruc.2008.08.027}, year = {2009}, abstract = {The theoretically possible stable conformers of free mn-15S2O3 maleonitrile-dithiacrown ether molecule were searched by means of a conformational study which consists of molecular dynamics and energy minimization calculations performed with MM2 force field and successive geometry optimization + frequency calculations performed first at B3LYP/3- 21G and then at B3LYP/6-31G(d) levels of theory. The obtained calculation results have clearly indicated that the free molecule in electronic ground state is very flexible and accordingly has many possible stable conformers of different conformational properties at room temperature; among them, the one having a macrocyclic ring structure in which all of the ether units oriented toward the center of the ring was determined the energetically most preferable conformer. In addition, the equilibrium geometrical parameters, vibrational normal modes and associated IR spectral data of the determined most stable three conformers of the molecule were calculated at B3LYP/6-31+G(d) and B3LYP/6-31++G(d,p) levels of theory. A successful assignment of the fundamental bands observed in the recorded experimental solid phase and solution phase IR spectra of the molecule was achieved in the light of the theoretical data obtained from these DFT calculations. To fit the calculated harmonic wavenumbers to the experimental ones, two different scaling procedures, referred to as "Scaled Quantum Mechanical Force Field (SQM FF) methodology" and "Scaling wavenumbers with empirical dual scale factors", were proceeded independently.}, language = {en} } @article{KleinpeterKoch2009, author = {Kleinpeter, Erich and Koch, Andreas}, title = {pi-delocalization in oligoalkynes induced by push-pull substituents and 1,3-conjugation : a combined 13C NMR and computational study ; dedicated to Prof. Alan R. Katritzky}, issn = {1089-5639}, doi = {10.1021/Jp905873f}, year = {2009}, abstract = {13C chemical shifts of the push;pull oligoalkynes Don-(C;C)n-Acc (n = 1;4; Don = morpholino; Acc = COMe, COOMe) were computed at the DFT (B3LYP/6-311+G(d,p) level of theory compared with the experimental ; values and the agreement employed as a measure of quality for the underlying structures. For the global minima structures, the occupation quotients of antibonding ;* and bonding ; orbitals (;*C;C/ ;C;C) and the bond lengths (dC;C) of the various C;C triple bonds were also computed and correlated to each other. The linear dependence obtained for the two parameters dC;C and ;*C;C/ ;C;C quantifies changes in ;-delocalization induced by the push;pull effect of the substituents and 1,3-conjugation (1,3,5- and 1,3,5,7-, respectively) of the C;C bonds in the oligoalkynes studied. A critical comparison of the push;pull effect, attenuated with increasing n, and the conjugative stabilization of the oligoalkynes, increasing with n, as concluded from dC;C and ;*C;C/;C;C of the oligoalkynes and the reference compounds Me-(C;C)n-Me, Don-(C;C)n-Me, and Me-(C;C)n-Acc), respectively (Don = morpholino; Acc = COMe, COOMe), is affiliated.}, language = {en} } @article{ThothSzatmariHeydenreichetal.2009, author = {Th{\´o}th, Di{\´a}na and Szatm{\´a}ri, Istv{\´a}n and Heydenreich, Matthias and Koch, Andreas and Kleinpeter, Erich and Fulop, Ferenc}, title = {Synthesis and conformational analysis of naphthylnaphthoxazine derivatives}, issn = {0166-1280}, doi = {10.1016/j.molstruc.2009.04.015}, year = {2009}, abstract = {Four new primary aminonaphthols (4, 5, 9 and 10) were synthesized from 1- or 2-naphthol and 1- or 2- naphthaldehyde via naphthoxazines in modified Mannich condensations. Simple ring-closure reactions of these aminonaphthols with paraformaldehyde, 4-nitrobenzaldehyde, phosgene or 4-chlorophenyl isothiocyanate led to new heterocyclic derivatives. In these transformations, either an sp2 or an sp3 carbon was inserted between the hydroxy and amino groups. The effects of substituents and the naphthyl ring on the conformation were investigated by means of NMR measurements, employing both dipolar and scalar couplings. The structures were confirmed by DFT quantum chemical calculations involving computed coupling constants, intramolecular distances between nuclei and the relative energies of the preferred conformers.}, language = {en} } @article{ShainyanUshakovTolstikovaetal.2008, author = {Shainyan, Bagrat A. and Ushakov, Igor A. and Tolstikova, Ljudmila L. and Koch, Andreas and Kleinpeter, Erich}, title = {N-Trifyl substituted 1,4-diheterocyclohexanes{\`u}stereodynamics and the Perlin effect}, year = {2008}, abstract = {The stereodynamic behaviour of 1-(trifluoromethylsulfonyl)piperidine 1, 4-(trifluoromethylsulfonyl)morpholine 2, 1,4-bis(trifluoromethylsulfonyl)piperazine 3 and 4-(trifluoromethylsulfonyl)thiomorpholine 1,1-dioxide 4 was studied by low-temperature 1H, 13C and 19F NMR spectroscopies. In acetone solution, compounds 1, 2 and 4 were found to exist as mixtures of two conformers in the ratio of 4:1, 4:1 and 8:1, respectively, differing by orientation of the CF3 group with respect to the ring. Compound 3 exists as a mixture of three conformers in the ratio of 3:28:69 also differing by the orientation of the two CF3 groups. Unlike the previously studied N-trifyl substituted 1,3,5-triheterocyclohexanes, the preferred conformers of compound 1 and of 1,4-diheterocyclohexanes 2-4 are those with the CF3 group directed outward from the ring, which is caused by intramolecular interactions of the oxygen atoms of the CF3SO2N groups with the equatorial hydrogens in the ;-position. B3LYP/6-311+G(d,p) calculations of the energy, geometry and NMR parameters corroborate the experimental data. The calculated Perlin effects for all conformers of compounds 1-4 as well as those measured for the major conformers of compounds 3 and 4 were analyzed by the use of the NBO analysis.}, language = {en} } @article{SchusterKochHeydenreichetal.2008, author = {Schuster, Ildik{\´o} and Koch, Andreas and Heydenreich, Matthias and Kleinpeter, Erich and Forr{\´o}, Enik{\"o} and L{\´a}z{\´a}r, L{\´a}szl{\´o} and Sillanp{\"a}{\"a}, Reijo and Fulop, Ferenc}, title = {Synthesis and Conformational Analysis of Tetrahydroisoquinoline-Fused 1,3,2-Oxazaphospholidines and 1,2,3- Oxathiazolidines}, year = {2008}, abstract = {The cyclizations of tetrahydroisoquinoline 1,2-amino alcohols with phenylphosphonic dichloride, bis(2- chloroethyl)phosphoramidic dichloride, thionyl chloride and sulfuryl chloride were utilized to synthesize 1,5,6,10b- tetrahydro-1,3,2-oxazaphospholo[4,3-a]isoquinolines (2, 3), 1,5,10,10a-tetrahydro-1,3,2-oxazaphospholo[3,4- b]isoquinolines (8, 9), 1,5,6,10b-tetrahydro-1,2,3-oxathiazolo[4,3-a]isoquinolines (4-6) anda 1,5,10,10a-tetrahydro- 1,2,3-oxathiazolo[3,4-b]isoquinoline (11), which are the first representatives of these ring systems. NMR spectroscopic analysis revealed the existence of conformational equilibria that are fast on the NMR timescale. Theoretical DFT calculations pointed to the participation of generally two preferred conformers in the conformational equilibria; the positions of the equilibria were indicated by the experimental NMR spectroscopic parameters, and they are in good agreement with the theoretically calculated energy differences of the participating conformers. For two compounds, which could be not isolated (10, 12), both the preferred conformers and the stereochemistry could be concluded from the DFT calculation results.}, language = {en} } @article{KleinpeterKoch2008, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Trisannelated benzenes - Aromatic molecules or 1,3,5-cyclohexatriene derivatives subjected to magnetic properties}, doi = {10.1016/j.theochem.2008.02.013}, year = {2008}, abstract = {The through space NMR shielding (TSNMRS) values of two tricyclobutabenzene (TCBB) derivatives 2, of the corresponding hexamethylene and hexaoxo TCBB derivatives 3, of [4n]annuleno[4n + 2]annulene 5 and of its tricyclobutadiene parent compound 4 have been ab initio calculated by the GIAO perturbation method employing the nucleus- independent chemical shift (NICS) concept of Paul von Ragu{\´e} Schleyer, and visualized as iso-chemical shielding surfaces (ICSS). TSNMRS values can be successfully employed to quantify and visualize the aromaticity of the central, and in 5 also of the terminal benzene ring moieties.}, language = {en} } @article{ShainyanUshakovMeshcheryakovetal.2008, author = {Shainyan, Bagrat A. and Ushakov, Igor A. and Meshcheryakov, Vladimir I. and Koch, Andreas and Kleinpeter, Erich}, title = {Variable temperature NMR and theoretical study of the stereodynamics of 5-trifluoromethylsulfonyl-1,3,5- dioxaazinane : Perlin effect subject to heteroatom substitution}, year = {2008}, abstract = {Multinuclear dynamic NMR spectroscopy of 5-trifluoromethylsulfonyl-1,3,5-dioxaazinane (4) revealed the existence of two close in energy chair conformers with differently oriented CF3 groups with respect to the ring. Of the two alternative routes for their interconversion, the ring inversion path with intermediate formation of the corresponding 2,5-twist-conformer is preferred, with the energy barrier of 11.2 kcal/mol in excellent agreement with the experimental value (11.7 kcal/mol). The Perlin effect is studied experimentally and calculated theoretically for all CH2 groups and found to be subject to the nature of the adjacent heteroatoms O and N, respectively.}, language = {en} } @article{KleinpeterKochShainyan2008, author = {Kleinpeter, Erich and Koch, Andreas and Shainyan, Bagrat A.}, title = {Cyclobutadiene dianion derivatives : Planar 4c,6e or three-dimensional 6c,6e aromaticity?}, doi = {10.1016/j.theochem.2008.05.027}, year = {2008}, abstract = {The spatial magnetic properties (Through Space NMR Shieldings - TSNMRS) of two cyclobutadiene derivatives (2 and 5) and of a number of cyclobutadiene dianion derivatives (3, 4 and 6-8) have been calculated by the GIAO perturbation method employing the Nucleus-Independent Chemical Shift (NICS) concept of P. v. Ragu{\´e} Schleyer, and visualized as Iso-Chemical-Shielding Surfaces (ICSS) of various size and direction. TSNMRS values can be successfully employed to quantify and visualize the (anti)aromaticity of the compounds studied and to discuss the influence of Li+ complexation to cyclobutadiene dianion (4a, 7 and 8) on planar 4c,6e or three-dimensional 6c,6e aromaticity.}, language = {en} } @article{KleinpeterRollaKochetal.2006, author = {Kleinpeter, Erich and Rolla, Nadja and Koch, Andreas and Taddei, Fernando}, title = {Hyperconjugation and the increasing bulk of OCOCX3 substituents in trans-1,4-disubstituted cyclohexanes destabilize the diequatorial conformer}, issn = {4393-4399}, doi = {10.1021/Jo0600858}, year = {2006}, abstract = {The trans diesters of 1,4-cyclohexanediol with a number of acetic acid analogues, CX3COOH, of varying steric hindrance and polarity (CX3 = Me, Et, iso-Pr, tert-Bu, CF3, CH2Cl, CHCl2, CCl3, CH2Br, CHBr2, CBr3) were synthesized, and the axial, axial/equatorial, equatorial conformational equilibria were studied by low-temperature H-1 NMR spectroscopy in CD2Cl2. The structures and relative energies of the axial, axial and equatorial, equatorial conformers were calculated at both the MP2/6-311G* and the MP2/6-311+G* levels of theory, and it was only by including diffuse functions that a good correlation of Delta G degrees(calcd) vs Delta G(exptl) could be obtained. Both the structures and the energy differences of the axial, axial and equatorial, equatorial conformers are discussed with respect to the established models of conformational analysis, viz., steric 1,3-diaxial and hyperconjugative interactions. Interestingly, the hyperconjugative interactions sigma(C-C)/sigma(C-H)->sigma*(C-O), together with a steric effect which also destabilizes the equatorial, equatorial conformers on increasing bulk of the substituents, proved to dominate the position of the conformational equilibria. In addition, the preference of the axial, axial conformers with respect to their equatorial, equatorial analogues was greater than expected from the conformational energies of the corresponding substituents in the monosubstituted cyclohexyl esters. The reason for this very interesting and unexpected result is also discussed}, language = {en} } @article{KlinkaBalentovaBernatetal.2006, author = {Klinka, Karel D. and Balentova, Eva and Bern{\´a}t, Juraj and Imrich, Jan and Vavrusova, Martina and Kleinpeter, Erich and Pihlaja, Kalevi and Koch, Andreas}, title = {Tautomerism, regioisomerism, and cyclization reactions of acridinyl thiosemicarbazides}, issn = {0022-152X}, doi = {10.1002/jhet.5570430317}, year = {2006}, abstract = {The regioselectivities of methyl- and phenylhydrazine with acridin-9-yl isothiocyanate (thus yielding thiosemicarbazides with acridine substituted on the urea-type side) were examined. Methythydrazine regioselectivity was high with the alpha-nitrogen atom overwhelmingly more nucleophilic than the beta-nitrogen atom; phenylhydrazine regioselectivity was poor but varied with the solvent and only in the case of ethanol was nucleophilic predominance of the alpha-nitrogen atom pronounced. Of note, whilst both phenyl thiosemicarbazides were present in solution only as spiro forms, the methyl product was present as an equilibrium mixture of open-chain and spiro thiosemicarbazides. Reactions on the NH2 blocked analogue of methyl acridin-9-ylthiosemicarbazide (1-isopropylidene-2- methylthiosemicarbazide) were also examined. Interestingly, present in the starting material itself was a structural motif of novelty wherein a triazolethione represented the major species of an equilibrium between cyclic and open-chain forms}, language = {en} } @article{NeuvonenNeuvonenKochetal.2007, author = {Neuvonen, Helmi and Neuvonen, Kari and Koch, Andreas and Kleinpeter, Erich}, title = {DFT study of the substituent cross-interaction effects on the conformation of substituted N-benzylideneanilines : Models of liquid crystal forming compounds ; use of C-13 Nmr chemcal shift of the C=N carbon as a tool to predict the conformation of the molecule}, doi = {10.1016/j.theochem.2007.03.023}, year = {2007}, abstract = {The conformations of N-benzylideneani lines p-X-C6H4-CH=N-C6H4 p-Y (X, Y = NO2, CN, CF3, F, Cl, Br, H, Me, OMe, NMe2) have been studied by B3LYP density functional (DFT) hybrid method in combination with the 6-31G* or 6-311G* split valence basis set. The twist of the plane of the aniline ring with respect to the other part of the molecule (tau(2)) is systematically controlled by substituents X and Y, the effect of Y being larger. The value of the dihedral angle tau(2), correlates nicely with equation tau(2) = rho(F)(Y)(x)sigma(F)(Y)+rho(+R)(Y)(x)sigma(+)(R)(Y) + k(x) or tau(2) = rho(F)(X)(y)sigma(F)(X)+rho(-)(R)(X)(y)sigma(+)(R)(X) + k(y), respectively, when aniline or benzylidene substituent is varied. ED substituents X diminish the sensitivity of tau(2) to the aniline substituent Y[rho(F)(Y)(x) and rho(+)(R)(Y)(x)] while ED substituents Y increase the sensitivity Of T2 to the benzylidene substituent X[rho(F)(X)(y) and rho(+)(R)(X)(y)]. There seems to be two competitive conjugative interactions for the aniline ring n electrons: one with the nitrogen lone pair and one with the C=N unit. Substituents X and Y adjust the extent of these interactions and therefore the conformation of the molecule. A good correlation is observed between the dihedral angle tau(2) and the experimental C-13 NMR chemical shift of the C=N carbon of N-benzylideneanilines in CDCl3 (C) 2007 Elsevier B.V. All rights reserved.}, language = {en} } @article{NeuvonenFulopNeuvonenetal.2008, author = {Neuvonen, Helmi and Fulop, Ferenc and Neuvonen, Kari and Koch, Andreas and Kleinpeter, Erich}, title = {Electronic effects of heterocyclic ring systems as evaluated with the aid of 13C and 15N NMR chemical shifts and NBO analysis}, doi = {10.1002/Poc.1271}, year = {2008}, abstract = {The electronic effects of the 5- and 6-membered heterocyclic rings on the C=N-N unit of five different hydrazone derivatives of pyridine-2-, -3- and -4-carbaldehydes, pyrrole-2-carbaldehyde, furan-2- and -3-carbaldehydes and thiophene-2- and -3-carbaldehydes have been studied with the aid of 13C and 15N NMR measurements together with the natural bond orbital (NBO) analysis. As model compounds are used the corresponding substituted benzaldehyde derivatives. The polarization of the C=N unit of the hydrazone functionality of the heteroaryl derivatives occurs in an analogous manner with that of phenyl derivatives. The electron-withdrawing heteroaryl groups destabilize and the electron-donating groups stabilize the positive charge development at the CN carbon while the effect on the negative charge development is opposite. The 15N NMR chemical shift of the C=N and C=N-N nitrogens and the NBO charges at C=N-N unit can be correlated with the replacement substituent constants of the heteroaryl groups. 13C NMR shifts of the C=N carbon of N,N- dialkylhydrazones of the heteroarenecarbaldehydes can be correlated with a dual parameter equation possessing the polar substituent constant ;* of the heteroaryl group and the electronegativity of the heteroatom as variables.}, language = {en} } @article{HeydenreichKochKlodetal.2006, author = {Heydenreich, Matthias and Koch, Andreas and Klod, Sabrina and Szatmari, Istvan and Fulop, Ferenc and Kleinpeter, Erich}, title = {Synthesis and conformational analysis of naphth[1', 2':5,6][1,3]oxazino[3,2-c][1,3]benzoxazine and naphth[1', 2':5,6][1,3]oxazino[3,4-c][1,3]benzoxazine derivatives}, series = {Tetrahedron}, volume = {62}, journal = {Tetrahedron}, number = {48}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0040-4020}, doi = {10.1016/j.tet.2006.09.037}, pages = {11081 -- 11089}, year = {2006}, abstract = {A new functional group, the hydroxy group, was inserted into a Betti base by reaction with salicylaldehyde, and the naphthoxazine derivatives thus obtained were converted by ring-closure reactions with formaldehyde, acetaldehyde, propionaldehyde or phosgene to the corresponding naphth[1',2':5,6][1,3]oxazino[3,2-c][1,3]benzoxazine derivatives. Further, the conformational analysis of these polycyclic compounds by NMR spectroscopy and an accompanying molecular modelling are reported; especially, both quantitative anisotropic ring current effects of the aromatic moieties in these compounds and steric substituent effects were employed to determine the stereochemistry of the naphthoxazinobenzoxazine derivatives.}, language = {en} } @article{NeuvonenFulopNeuvonenetal.2005, author = {Neuvonen, Kari and Fulop, Ferenc and Neuvonen, Helmi and Koch, Andreas and Kleinpeter, Erich and Pihlaja, Kalevi}, title = {Propagation of polar substituent effects in 1-(substituted phenyl)-6,7-dimethoxy-3,4-dihydro- and -1,2,3,4- tetrahydroisoquinolines as explained by resonance polarization concept}, year = {2005}, abstract = {Propagation of inductive and resonance effects of phenyl substituents within 1-(substituted phenyl)-6,7- dimethoxy-3,4-dihydro- and -1,2,3,4-tetrahydroisoquinolines were studied with the aid of C-13 and N-15 NMR chemical shifts and ab initio calculations. The substituent-induced changes in the chemical shift (SCS) were correlated with a dual substituent parameter equation. The contributions of conjugative (rho(R)) and nonconjugative effects (rho(F)) were analyzed, and mapping of the substituent-induced changes is given over the entire isoquinoline moiety for both series. The experimental results can be rationalized with the aid of the resonance polarization concept. This means the consideration of the substituent-sensitive balance of different resonance structures, i.e., electron delocalization, and the effect of the aromatic ring substituents on their relative contributions. With tetrahydroisoquinolines, the delocalization of the nitrogen lone pair (stereoelectronic effect) particularly contributes. Correlation analysis of the Mulliken atomic charges for the dihydroisoquinoline derivatives was also performed. The results support the concept of the substituent-sensitive polarization of the isoquinoline moiety even if the polarization pattern achieved via the NMR approach is not quite the same as that predicted by the computational charges. Previously the concepts of localized pi- polarization and extended polarization have been used to explain polar substituent effects within aromatic side-chain derivatives. We consider that the resonance polarization model effectively contributes to the understanding of the polar substituent effects}, language = {en} } @article{KlinkaBalentovaBernatetal.2006, author = {Klinka, Karel D. and Balentova, Eva and Bern{\´a}t, Juraj and Imrich, J{\´a}n and Vavrusov{\´a}, Martina and Pihlaja, Kalevi and Koch, Andreas and Kleinpeter, Erich and Kelling, Alexandra and Schilde, Uwe}, title = {Structural revision of products resulting from the reaction of methylhydrazine with acridin-9-yl isothiocyanate due to unexpected acridinyl migration And further reactions}, issn = {1551-7004}, year = {2006}, abstract = {The reaction of methyl acridin-9-ylthiosemicarbazide under basic conditions with methyl bromoacetate resulted in a 1,3-thiazolin-4-one structure as provided by X-ray crystallography. The structure forced a re-evaluation of the reactant methyl acridin-9-ylthiosemicarbazide, originally thought to be 2-methyl 4-acridin-9-ylthiosemicarbazide based on synthetic expectations, but which when examined by X-ray crystallography was found to be in fact the isomeric 2- methyl 1-acridin-9-ylthiosemicarbazide resulting from rearrangement via a spiro form which it is in equilibrium with in solution. The product resulting from reaction with methyl iodide was also studied and the previously reported semicarbazide produced by reaction with MNO was re-examined. In both cases, the 1,2 isomer rather than the 2,4 isomer was found to be present based on the sign of the 3JCH3,N11 coupling. Full characterization of the compounds was rendered by 1H, 13C, and 15N solution-state NMR, and in the solid state, by both 13C and 15N NMR.}, language = {en} } @article{KlinkaImrichDaniheletal.2005, author = {Klinka, Karel D. and Imrich, Jan and Danihel, I. and Bohm, Stanislav and Kristian, Pavol and Harnul'akova, S. and Pihlaja, Kalevi and Koch, Andreas and Kleinpeter, Erich}, title = {Configuration and E/Z interconversion mechanism of O(S)-allyl-S(O)-methyl-N-(acridin-9-yl)iminothiocarbonate}, issn = {0749-1581}, year = {2005}, abstract = {The configuration and dynamic behavior of O-allyl-S-methyl-N-(acridin-9-yl)iminothiocarbonate (1) and its S- allyl-O-methyl regioisomer (2) were studied using quantum chemical calculations and by applying a novel graphical method to scatter maps obtained from MD simulations for evaluation of an NOE-weighted internuclear distance (r(NOE)). Energy calculations indicated that the Z configuration was predominant for each compound and, further, this was supported both by the calculated chemical shifts and the rNOE. Both N-inversion- and rotation-type transition-state structures were also calculated for the E/Z isomerization process, the results indicating that the preferred interconversion mechanism for 1 is N-inversion, but contrastingly, interconversion via rotation is equally as probable as N-inversion for 2. This supports the notion that one or the other or both pathways can be active and each system needs to be assessed on a case- by-case basis. Copyright (c) 2005 John Wiley \& Sons, Ltd}, language = {en} } @article{HeydenreichKochSarodnicketal.2005, author = {Heydenreich, Matthias and Koch, Andreas and Sarodnick, Gerhard and Kleinpeter, Erich}, title = {Quinoxalines XIV : Synthesis, H-1, C-13, N-15 NMR spectroscopic, and quantum chemical study of 1H-pyrazolo[3,4- b]quinoxalines (flavazoles)}, issn = {0040-4020}, year = {2005}, abstract = {The synthesis of a series of 1H-pyrazolo[3,4-b]quinoxalines (flavazoles) by acylation, alkylation, halogenation, and aminomethylation of the parent compound is reported and their structure is investigated by H-1, C-13 and N-15 NMR spectroscopy. The restricted rotation about the partial C, N double bond of the N-acyl derivatives 7-10 is studied by dynamic NMR spectroscopy and the barriers to rotation are determined. In order to assign unequivocally the 15 N chemical shifts of N-4 and N-9, in case of 3-substituted flavazoles, exemplary the H-1, C-13, and N-15 NMR chemical shifts of 34, 35, and 39 are also theoretically calculated by quantum chemical methods [ab initio at different levels of theory (HF/6-3G* and B3LYP/6-31G*)]. (C) 2005 Elsevier Ltd. All rights reserved}, language = {en} } @article{KleinpeterKochMikhovaetal.2008, author = {Kleinpeter, Erich and Koch, Andreas and Mikhova, Bozhana and Stamboliyska, Bistra A. and Kolev, Tsonko M.}, title = {Quantification of the push-pull character of the isophorone chromophore as a measure of molecular hyperpolarizability for NLO applications}, issn = {0040-4039}, doi = {10.1016/j.tetlet.2007.12.107}, year = {2008}, abstract = {The push-pull character of a series of para-phenyl substituted isophorone chromophores has been quantified by the 13C chemical shift difference of the three conjugated partial C=C double bonds and the quotient of the occupations of both the bonding and anti-bonding orbitals of these C=C double bonds as well. The correlations of the two push-pull quantifying parameters, and to the corresponding bond lengths, strongly recommend ;*c=c/ ;c=c as the general parameter to estimate charge alternation and as a very useful indication of the molecular hyperpolarizabilities for NLO application of the compounds studied.}, language = {en} } @article{NeuvonenNeuvonenKochetal.2005, author = {Neuvonen, Helmi and Neuvonen, Kari and Koch, Andreas and Kleinpeter, Erich}, title = {Ab initio study of the substituent effects on the relative stability of the E and Z conformers of phenyl esters : Stereoelectronic effects on the reactivity of the carbonyl group}, issn = {1089-5639}, year = {2005}, abstract = {Equilibria between the Z (tau(1) = 0 degrees) and E (tau(1) = 180 degrees) conformers of p-substituted phenyl acetates 4 and trifluoroacetates 5 (X = OMe, Me, H, Cl, CN, NO2) were studied by ab initio calculations at the HF/6-31G* and MP2/6-31G* levels of theory. The preference for the Z conformer, Delta E(HF), was calculated to be 5.36 kcal mol(-1) and 7.50 kcal mot(-1) for phenyl acetate and phenyl trifluoroacetate (i.e., with X = H), respectively. The increasing electron-withdrawing ability of the phenyl substituent X increases the preference of the Z conformer. An excellent correlation with a negative slope was observed for both series between Delta E of the E-Z equilibrium and the Hammett sigma constant. By using an appropriate isodesmic reaction, it was shown that electron-withdrawing substituents decrease the stability of both conformers, but the effect is higher with the E conformer. Electron-withdrawing phenyl substituents decrease the delocalization of the lone pair of the ether oxygen to the C=O antibonding orbital (n(O) -> pi*(C=O)) in both the E and Z forms and in both series studied; this effect is higher in the E conformer than in the Z conformer. The n(O) -> pi*(C=O) electron donation has a minimum value with tau(1) = 90 degrees and a maximum value with tau(1) = 90 degrees (the Z conformer), the value with tau(1) = 180 degrees (the E conformer) being between these two values, obviously due to steric hindrance. The effects of the phenyl substituents on the reactivity of the esters studied are discussed in terms of molecular orbital interactions. ED/EW substituents adjust the availability of the pi*(C=O) antibonding orbital to interact with the lone pair orbital of the attacking nucleophile and therefore affect the reactivity: EW substituents increase and ED substituents decrease it. Excellent correlations were observed between the rate coefficients of nucleophilic acyl substitutions and pi*(C=O) occupancies of the ester series 4 and}, language = {en} } @article{SeidlCarneiroTostesetal.2005, author = {Seidl, Peter Rudolf and Carneiro, J. W. D. and Tostes, J. G. R. and Koch, Andreas and Kleinpeter, Erich}, title = {Interpretation of conformational effects on 2-endo-norborneol by natural chemical shielding analysis}, issn = {1089-5639}, year = {2005}, abstract = {This paper represents an extension of our work on the H-1 and C-13 NMR chemical shifts of norbornane and 2-endo- norborneol. NCS-NBO analysis was employed to probe contributions of bond orbitals and orbitals of lone pairs to nuclear shielding in conformers of the alcohol generated by rotation of the C-O bond. Variations in H-1 and C-13 chemical shifts with the dihedral angle are discussed in terms of Lewis and non-Lewis partitioning and their respective importance is evaluated. In addition to hyperconjugation of the lone pair in a p orbital of oxygen that was previously reported, a sizable participation of the lone pair which is in an sp orbital is also observed and their combined effect dominates the carbon chemical shifts of the C-1-C-2-OH and C-3-C-2-OH fragments. Both lone pairs on oxygen also contribute to localized, though-space effects on nuclei in the vicinity, these effects answering for the largest deviations in hydrogen chemical shifts on rotation around the C-O bond. On the other hand, for conformers in which nonbonded repulsions lead to distortions in the molecular framework, variations in chemical shifts may be attributed to angular effects}, language = {en} } @article{KleinpeterKochPihlaja2005, author = {Kleinpeter, Erich and Koch, Andreas and Pihlaja, Kalevi}, title = {Application of (1)J(C,H) coupling constants in conformational analysis}, issn = {0040-4020}, year = {2005}, abstract = {Conformational equilibria for a number of methyl substituted 1,3-dioxanes 1, 1,3-oxathianes 2 and 1,3-dithianes 3 were calculated at the HF and DFT levels of theory. In addition to the chair conformers also the energetically adjacent twist conformers were considered and the positions of the corresponding conformational equilibria estimated. On the basis of the global energy minima of conformers, participating in the conformational equilibria, the 1J(C,Hax,equ) coupling constants were calculated using the GIAO method and compared with the experimental values obtained from C-13, H- 1 coupled C-13 NMR spectra. The Perlin effect, the influence of the solvent and the suitability of this NMR parameter for assigning the conformational equilibria present are critically discussed. (c) 2005 Elsevier Ltd. All rights reserved}, language = {en} } @article{KleinpeterKoch2009, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Visualization of homoaromaticity in cations, neutral molecules and anions by spatial magnetic properties (through space NMR shieldings) - an 1H/13C NMR chemical shift study}, issn = {0040-4020}, doi = {10.1016/j.tet.2009.04.063}, year = {2009}, abstract = {Prototypes for homoaromaticity in cations, neutral molecules, and anions are theoretically studied at the MP2 level of theory. For the global minimum structures on the potential energy surface both 1H/13C chemical shifts and spatial magnetic properties as through space NMR shieldings (TSNMRS) were calculated by the GIAO perturbation method. The TSNMRS are visualized as iso-chemical-shielding surfaces (ICSS) of different sign and size. Coincident experimental and computed 1H/13C chemical shifts afforded the possibility to decide from the TSNMRSs at hand on both the existence and the size of homoaromaticity in the molecules studied.}, language = {en} } @article{KleinpeterKoch2010, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Probing the exohedral magnetic properties of C20 derivatives by through space NMR shieldings (TSNMRS)}, issn = {0166-1280}, doi = {10.1016/j.theochem.2009.09.018}, year = {2010}, abstract = {The through space NMR shieldings (TSNMRS) of dodecahedrane C20H20, of the isomeric hydrocarbons C20H12, of the ions C20H122+ and C20H122- of the fluxional fullerene C20 and of its dication C202+ have been ab initio calculated employing the NICS concept on basis of MP2/6-31G* geometries and visualized as iso-chemical-shielding/deshielding surfaces (ICSSs). TSNMRS values were employed to study the exohedral magnetic properties of the compounds studied. Hereby, the curved It-conjugation in the compounds studied could be quantified.}, language = {en} } @article{ShainyanUshakovKochetal.2006, author = {Shainyan, Bagrat A. and Ushakov, Igor A. and Koch, Andreas and Kleinpeter, Erich}, title = {Stereodynamics of 1-(methylsulfonyl)-3,5-bis(trifluoromethylsulfonyl)-1,3,5-triazinane: Experimental and theoretical analysis}, doi = {10.1021/Jo061112x}, year = {2006}, abstract = {Dynamic NMR of 1-(methylsulfonyl)-3,5-bis(trifluoromethylsulfonyl)-1,3,5-triazinane reveals the existence of three conformers and two dynamic processes: ring inversion and rotation about the N-S bond, both processes having Delta G(double dagger) = 13.5 kcal/mol. An unprecedented large reverse Perlin effect (J(CHax) > J(CHeq)) was found experimentally and calculated theoretically.}, language = {en} } @article{KleinpeterBoelkeKoch2010, author = {Kleinpeter, Erich and Boelke, Ute and Koch, Andreas}, title = {Subtle Trade-off Existing between (Anti)Aromaticity, Push-Pull Interaction, Keto-Enol Tautomerism, and Steric Hindrance When Defining the Electronic Properties of Conjugated Structures}, issn = {1089-5639}, year = {2010}, language = {en} } @article{KleinpeterKoch2010, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Identification of benzenoid and quinonoid structures by through-space NMR shieldings (TSNMRS)}, issn = {1089-5639}, year = {2010}, language = {en} } @article{BalciKochKleinpeter2006, author = {Balci, Kubilay and Koch, Andreas and Kleinpeter, Erich}, title = {A comparative vibrational spectroscopic investigation of free mn-12S(2)O(2) and fn-12S(2)O(2) dithiacrown ethers based on DFT calculations}, issn = {0022-2860}, doi = {10.1016/j.molstruc.2005.10.048}, year = {2006}, abstract = {A successful assignment for the fundamental bands observed in the experimental IR spectra of mn-12S(2)O(2) and fn-12S(2)O(2) dithiacrown ethers was achieved by the aid of the density functional theory (DFT) based quantum mechanical calculations carried out at the 133LYP/6-31G(d) and B3LYP/6-31 + G(d) level of theory. Two different scaling approaches, '(i) scaled quantum mechanics force field (SQM FF) methodology', and (ii) the 'scaling frequencies with dual empirical scale factors', were used in order to fit the calculated harmonic frequencies to the experimental ones. Potential energy distribution (PED) calculations were carried out to define the internal coordinate contributions to each normal mode and to define the corresponding normal modes of the molecules. The effects of the conformational differences onto the IR active normal modes of the two isomeric molecules and their corresponding experimental frequencies were discussed in the light of the calculated spectral data.}, language = {en} } @article{KleinpeterKlodKoch2007, author = {Kleinpeter, Erich and Klod, Sabrina and Koch, Andreas}, title = {Visualization of through space NMR shieldings of aromatic and anti-aromatic molecules and a simple means to compare and estimate aromaticity}, issn = {0166-1280}, doi = {10.1016/j.theochem.2007.02.049}, year = {2007}, abstract = {Through space NMR shieldings of aromatic (benzene, mono-substituted and annelated benzenes, ferrocene, [14]- and [18]-annulenes, phenylenes and tetra- to heptahelicene) and anti-aromatic molecules (cyclobutadiene and pentalene) were assessed by ab initio molecular-orbital calculations. Employing the nucleus-independent chemical shifts (NICS) concept, these through space NMR shieldings were visualized as iso-chemical-shielding surfaces (ICSSs) and can be applied quantitatively to determine the stereochemistry of proximal nuclei. In addition, the distances in {\AA} at ICSS values of ±0.1 ppm in-plane and perpendicular-to-center of the aromatic ring system were employed as a simple means to compare and estimate qualitatively the aromaticity of the systems at hand.}, language = {en} } @article{BoehmTomašcikovaImrichetal.2009, author = {Boehm, Stanislav and Tomašcikov{\´a}, Jana and Imrich, J{\´a}n and Danihel, Ivan and Kristian, Pavol and Koch, Andreas and Kleinpeter, Erich and Klika, Karel D.}, title = {Computational study to assign structure, tautomerism, E/Z and s-cis/s-trans isomerism, pi-delocalization, partial aromaticity, and the ring size of 1,3-thiazolidin-4-ones and 1,3-thiazin-4-ones formed from thiosemicarbazides}, issn = {0166-1280}, doi = {10.1016/j.theochem.2009.09.019}, year = {2009}, abstract = {A set of structures encompassing 1-(9-acridinyl)thiosemicarbazide and its 2-methyl derivative together with their various tautomeric structures; the 5-membered ring 1,3-thiazolidin-4-one products resulting from the reaction of 1- (9-acridinyl)thiosemicarbazide and its 2-methyl derivative with dimethyl acetylenedicarboxylate (DMAD) together with the alternative 6-membered ring isomeric reaction products as well as other potential isomeric structures; and the 6- membered ring 1,3-thiazin-4-one product resulting from the reaction of 2-methyl-1-(9-acridinyl)thiosemicarbazide with methyl propiolate (MP) together with the alternative 5-membered ring isomeric reaction product were all extensively studied by molecular modeling calculations using DFT at the B3LYP/6-31G(d,p) level of theory. The ring-chain tautomerism of the thiosemicarbazides, the regio- and stereoselectivity of the reactions, the adopted conformations and E/Z configurations of the products, the prototropic tautomerism of all the compounds, and the reasons for the predominance of the s-cis conformation of the Z configuration of the 1,3-thiazolidin-4-one product in particular were all extensively analyzed. Comparison of the modeled structures were also made to the 1,3-thiazolidin-4-one and 1,3-thiazin-4-one structures of the methyl derivative as well as 1-(9-acridinyl)thiosemicarbazide available from X-ray crystallographic analysis. Tactics utilizing spectroscopic methods {1R frequencies (nu) and NMR chemical shifts (delta), scalar coupling constants (J), and NOEs (eta)} in conjunction with molecular modeling calculations of the spectral parameters (frequency calculations (v) and NMR 6 using the GIAO method and J by calculation of the Fermi contact term) were evaluated in terms of proving 5- or 6-membered ring formation.}, language = {en} } @article{deAraujoChaconCarneiroetal.2010, author = {de Araujo, Martha T. and Chacon, Eluzir P. and Carneiro, Jos{\´e} W. de M. and Koch, Andreas and Kleinpeter, Erich}, title = {Analysis of anisotropic effects in trinuclear metal carbonyl compounds by visualization of through-space NMR shielding}, issn = {1610-2940}, doi = {10.1007/s00894-010-0662-3}, year = {2010}, abstract = {Through-space NMR shieldings were calculated for trinuclear metal-carbonyl compounds [M-3(CO)(12)] (M = Fe, Ru, Os), employing the nucleus-independent chemical shift approach. The through-space shieldings were visualized as a contour plot of iso-chemical shielding surfaces, and were applied to quantify the overall anisotropic effect of the carbonyl groups, as well as to identify the influence of the transition metal on the scopes of the corresponding anisotropy cones. The shielding surfaces show that the anisotropic effect of the carbonyl groups at equatorial positions changes depending on the metal. This effect was associated with pi-backdonation from the metal to the carbonyl groups in that position, in agreement with geometric data as well as calculated NMR parameters. Therefore, visualization of the through-space NMR shieldings of trinuclear metal-carbonyl compounds of group 8 is able to reflect the distinct arrangements of the carbonyl groups in these organometallic compounds.}, language = {en} } @article{KleinpeterKochSeidl2008, author = {Kleinpeter, Erich and Koch, Andreas and Seidl, Peter R.}, title = {Visualization and quantification of the anisotropic effect of C=C double bonds on 1H NMR spectra of highly congested hydrocarbons-indirect estimates of steric strain}, doi = {10.1021/Jp801063t}, year = {2008}, abstract = {The anisotropic effect of the olefinic C=C double bond has been calculated by employing the NICS (nucleus independent chemical shift) concept and visualized as an anisotropic cone by a through space NMR shielding grid. Sign and size of this spatial effect on 1H chemical shifts of protons in norbornene, exo- and endo-2-methylnorbornenes, and in three highly congested tetracyclic norbornene analogs have been compared with the experimental 1H NMR spectra as far as published. 1H NMR spectra have also been calculated at the HF/6-31G* level of theory to get a full, comparable set of proton chemical shifts. Differences between ;(1H)/ppm and the calculated anisotropic effect of the C=C double bond are discussed in terms of the steric compression that occurs in the compounds studied.}, language = {en} } @article{KleinpeterKochSahooetal.2008, author = {Kleinpeter, Erich and Koch, Andreas and Sahoo, Himansu S. and Chand, Dillip Kumar}, title = {Anisotropic effect of the nitrate anion-manifestation of diamagnetic proton chemical shifts in the 1H NMR spectra of NO3-coordinated complexes}, doi = {10.1016/j.tet.2008.03.063}, year = {2008}, abstract = {The anisotropic effect of the planar nitrate anion NO3- has been ab initio calculated employing the Nucleus- Independent Chemical Shift (NICS) concept of von Ragu{\´e} Schleyer and visualized as Iso-Chemical-Shielding Surfaces (ICSSs) of various (de)shieldings. Complexation-induced shifts in the 1H NMR spectra of nitrate/metal complexes or nitrate/receptor supramolecules can be separated now into anisotropic influences of the suitably coordinated nitrate anions and effects originating from differential sources.}, language = {en} } @article{KleinpeterPihlajaSinkkonenetal.2011, author = {Kleinpeter, Erich and Pihlaja, Kalevi and Sinkkonen, Jari and St{\´a}jer, Gez{\´a} and Koch, Andreas}, title = {1-Oxo-1,3-dithiolanes{\`u}synthesis and stereochemistry}, issn = {0749-1581}, year = {2011}, abstract = {1-Oxo-1,3-dithiolane (4) and its cis- andtrans-2-methyl (5,6), -4-methyl (7,8) and -5-methyl (9,10) derivatives were prepared by oxidizing the corresponding 1,3-dithiolanes (1-3) with NaIO4 in water. The oxides were purified and their isomers separated using thin layer chromatography. The structural characterization was carried out with 1H and 13C NMR spectroscopy and molecular modelling. The sulfoxides 4-6 and 8-10 attain two S(1) type envelopes (sometimes slightly distorted) the S=Oax envelope greatly dominating. Cis-4-methyl-1-oxo-1,3-dithiolane is a special case exhibiting both two closely related S=Oax (30 and 27\%) as well as S=Oeq (21 and 22\%) forms [S(1) and C(4) envelopes, respectively]. The relative energies of these conformations, the values of 1H-1H coupling constants and 1H and 13C chemical shifts were estimated by computational methods and they support well the conclusions based on the experimental data.}, language = {en} } @book{KleinpeterKlodKoch2008, author = {Kleinpeter, Erich and Klod, Sabrina and Koch, Andreas}, title = {Endohedral and external through-space shieldings of the fullerenes C50, C60, C60-6, C70, and C70-6- visualization of (Anti)aromaticity and their effects on the chemical shifts of encapsulated nuclei}, doi = {10.1021/jo702316h}, year = {2008}, abstract = {Endohedral and external through-space NMR shieldings (TSNMRS) and the magnetic susceptibilities of the fullerene carbon cages of C50, C60, C60-6, C70, and C70-6 were assessed by ab initio molecular orbital calculations. Employing the nucleus-independent chemical shift (NICS) concept, these TSNMRS were visualized as isochemical shielding surfaces (ICSS) and were applied to quantitatively estimate either the aromaticity or the anti-aromaticity on the fullerene surface pertaining to the five- or six-membered ring moieties and the shielding of any nuclei enclosed within the carbon cages. Differences between the NICSs calculated at the center of the fullerene carbon cages and the experimental chemical shifts of encapsulated NMR-active nuclei as well as experimental shieldings observed for different encapsulated nuclei were able to be understood readily for the first time.}, language = {en} } @article{KleinpeterNeuvonenNeuvonenetal.2012, author = {Kleinpeter, Erich and Neuvonen, Kari and Neuvonen, Helmi and Koch, Andreas}, title = {Taft equation in the light of NBO computations : Introduction of a novel polar computational substituent constant scale for alkyl groups}, issn = {2210-271X}, year = {2012}, language = {en} } @article{KleinpeterNeuvonenNeuvonenetal.2011, author = {Kleinpeter, Erich and Neuvonen, Kari and Neuvonen, Helmi and Koch, Andreas}, title = {NBO analysis of polar and steric effect using the axial-equatorial equilibrium of cyclohexyl acetates as a probe}, issn = {2210-271X}, year = {2011}, language = {en} } @article{KleinpeterBalciYaparetal.2012, author = {Kleinpeter, Erich and Balci, Kubilay and Yapar, G. and Akkaya, S. and Akyuz, S. and Koch, Andreas}, title = {A conformational analysis and vibrational spectroscopic investigation on 1,2-bis(o-carboxyphenoxy) ethane molecule}, year = {2012}, abstract = {The minima on the potential energy surface of 1,2-bis(o-carboxyphenoxy) ethane (CPE) molecule in its electronic ground state were searched by a molecular dynamics simulation performed with MM2 force field. For each of the found minimum-energy conformers, the corresponding equilibrium geometry, charge distribution, HOMO-LUMO energy gap, force field, vibrational normal modes and associated IR and Raman spectral data were determined by means of the density functional theory (DFT) based electronic structure calculations carried out by using B3LYP method and various Pople- style basis sets. The obtained theoretical data confirmed the significant effects of the intra- and inter-molecular hydrogen bonding interactions on the conformational structure, force field, and group vibrations of the molecule. The same data have also revealed that two of the determined stable conformers, both of which exhibit pseudo-crown structure, are considerably more favorable in energy to the others and accordingly provide the major c ntribution to the experimental spectra of CPE. In the light of the improved vibrational spectral data obtained within the "SQM FF" methodology and "Dual Scale Factors" approach for the monomer and dimer forms of these two conformers, a reliable assignment of the fundamental bands observed in the experimental room-temperature IR and Raman spectra of the molecule was given, and the sensitivities of its group vibratb20s to conformation, substitution and dimerization were discussed.}, language = {en} } @article{KleinpeterCsuetoertoekiSzatmarietal.2012, author = {Kleinpeter, Erich and Cs{\"u}t{\"o}rt{\"o}ki, Ren{\´a}ta and Szatm{\´a}ri, Istv{\´a}n and Heydenreich, Matthias and Koch, Andreas and Starke, Ines and Fulop, Ferenc}, title = {Novel piperidine-fused benzoxazino- and quinazolinonaphthoxazines-synthesis and conformational study}, issn = {0040-4020}, year = {2012}, abstract = {The reactions of 1-(amino(2-hydroxyphenyl)methyl)-2-naphthol (3) and 1-(amino(2-aminophenyl)methyl)-2-naphthol (6) with glutardialdehyde resulted in the formation of piperidine-fused benzoxazinonaphthoxazine 4 and quinazolinonaphthoxazine 7, respectively, both in diastereopure form. The full conformational search protocols of 4 and 7 were successfully carried out by NMR spectroscopy and accompanying molecular modelling; the global minimum-energy conformers of all diastereomers were computed, and the assignments of the most stable stereoisomers, Gtct1 for 4 and Gtct1 for 7, were corroborated by spatial NOE information relating to the H7a-H10a-H15b and H,H coupling patterns of the protons in the flexible part of the piperidine moiety. Additionally, mass spectrometric fragmentation was investigated in collision-induced dissociation experiments. The elemental compositions of the ions were determined by accurate mass measurements.}, language = {en} } @article{KleinpeterBranacStojanoviKoch2012, author = {Kleinpeter, Erich and Branac-Stojanovi, Marija and Koch, Andreas}, title = {Is the Conventional Interpretation of the Anisotropic Effects of CC Double Bonds and Aromatic Rings in NMR Spectra in Terms of the -Electron Shielding/Deshielding Contributions Correct?}, issn = {1521-3765}, year = {2012}, abstract = {Based on the nucleus-independent chemical shift (NICS) concept, isotropic magnetic shielding values have been computed along the three Cartesian axes for ethene, cyclobutadiene, benzene, naphthalene, and benzocyclobutadiene, starting from the molecular/ring center up to 10;{\AA} away. These through-space NMR spectroscopic shielding (TSNMRS) values, which reflect the anisotropic effects, have been broken down into contributions from localized- and canonical molecular orbitals (LMOs and CMOs); these contributions revealed that the proton NMR spectroscopic chemical shifts of nuclei that are spatially close to the C=C double bond or the aromatic ring should not be explained in terms of the conventionally accepted ;-electron shielding/deshielding effects. In fact, these effects followed the predictions only for the antiaromatic cyclobutadiene ring.}, language = {en} } @article{KleinpeterCsuetoertoekiSzatmarietal.2012, author = {Kleinpeter, Erich and Cs{\"u}t{\"o}rt{\"o}ki, Ren{\´a}ta and Szatm{\´a}ri, Istv{\´a}n and Koch, Andreas and Fulop, Ferenc}, title = {Syntheses and conformational analyses of new naphth[1,2-e][1,3]oxazino[3,2-c]quinazolin-13-ones}, year = {2012}, abstract = {The syntheses of naphth[1,2-e][1,3]oxazino[3,2-c]quinazolin-13-one derivatives (3a-f) were achieved by the solvent-free heating of benzyloxycarbonyl-protected intermediates (2a-f) with MeONa. For intermediates 2a-f, prepared by the reactions of substituted aminonaphthols with benzyl N-(2-formylphenyl)carbamate, not only the expected trans ring form B and chain form A1, but also the rearranged chain form A2 as a new tautomer were detected in DMSO at room temperature. The quantity of A2 in the tautomeric mixture was changed with time. Conformational analyses of the target heterocycles 3a-f by NMR spectroscopy and accompanying theoretical calculations at the DFT level of theory revealed that the oxazine ring preferred a twisted chair conformation and the quinazolone ring was planar. Besides the conformations, both the configurations at C-7a and C-15 and the preferred rotamers of the 1-naphthyl substituent at C-15 were assigned, which allowed evaluation of the aryl substituent-dependent steric hindrance in this part of the molecules. Configurational assignments were corroborated by quantifying the ring current effect of 15-aryl in terms of spatial NICS.}, language = {en} } @article{KleinpeterHeydenreichKochetal.2012, author = {Kleinpeter, Erich and Heydenreich, Matthias and Koch, Andreas and Linker, Torsten}, title = {Synthesis and NMR spectroscopic conformational analysis of esters of 4-hydroxy-cyclohexanone-the more polar the molecule the more stable the axial conformer}, issn = {0040-4020}, year = {2012}, abstract = {The esters of 4-hydroxy-cyclohexanone and a series of carboxylic acids R-COOH with R of different electronic and steric influence (R=Me, Et, n-Pr, i-Pr, n-Bu, i-Bu, sec-Bu, t-Bu, CF3, CH2Cl, CHCl2, CCl3, CH2Br, CHBr2, and CBr3) were synthesized and the conformational equilibria studied by 1H and 13C NMR spectroscopy at 103 K and at 295 K, respectively. The geometry of optimized structures of the axial/equatorial chair conformers was computed at the ab initio MO and DFT levels of theory. Only one preferred conformation was obtained for the axial and the equatorial conformer as well. When comparing the conformational equilibria of the cyclohexanone esters with those of the corresponding cyclohexyl esters a certain polarity contribution of the cyclohexanone framework was revealed, which is independent of the substituent effects and increases the stability of the axial conformers by a constant amount.}, language = {en} } @article{KleinpeterKoch2011, author = {Kleinpeter, Erich and Koch, Andreas}, title = {The anisotropic effect of functional groups in 1H NMR spectra is the molecular response property of spatial NICS-the frozen conformational equilibria of 9-arylfluorenes}, issn = {0040-4020}, year = {2011}, abstract = {Rotation about the single bond adjoining the aryl and fluorene moieties in 9-arylfluorenes can be frozen out on the NMR timescale if methyl groups are located at either one or both of the ortho positions of the aryl substituent. In the ground-state of these rotamers, the planes of the aryl and fluorene moieties are perpendicular to each other and the methyl protons are either shielded or deshielded, respectively, due to the ringe current effect of the fluorene moiety. This anisotropic effect on the 1H chemical shifts of the methyl protons has been quantified on the basis of through- space NMR shieldings (TSNMRS) and subsequently _______ compared with the experimentally observed chemical shift differences _____. In this context, the experimental anisotropic effects of functional groups in the !H NMR have proven to quantitatively be the molecular response property of theoretical spatial nucleus independent chemical shieldings (NICS). Differences between _______ and _____ were, for the first time, also quantified as arising from steric compression.}, language = {en} } @article{CsuetoertoekiSzatmariKochetal.2011, author = {Cs{\"u}t{\"o}rt{\"o}ki, Ren{\´a}ta and Szatm{\´a}ri, Istv{\´a}n and Koch, Andreas and Heydenreich, Matthias and Kleinpeter, Erich and Fulop, Ferenc}, title = {Synthesis and conformational analysis of new naphth[1,2-e][1,3]oxazino[3,4-c]quinazoline derivatives}, issn = {0040-4020}, year = {2011}, language = {en} } @article{KleinpeterKoch2011, author = {Kleinpeter, Erich and Koch, Andreas}, title = {Chelatoaromaticity-existing: yes or no? An answer given by spatial magnetic properties (through space NMR shieldings-TSNMRS)}, issn = {1463-9076}, year = {2011}, language = {en} } @article{SzatmariHeydenreichKochetal.2013, author = {Szatmari, Istvan and Heydenreich, Matthias and Koch, Andreas and Fulop, Ferenc and Kleinpeter, Erich}, title = {Unexpected isomerization of new naphth[1,3]oxazino[2,3-a] isoquinolines in solution, studied by dynamic NMR and supported by theoretical DFT computations}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {35}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2013.06.094}, pages = {7455 -- 7465}, year = {2013}, abstract = {Through the reactions of 1-aminomethyl-2-naphthol and substituted 1-aminobenzyl-2-naphthols with 3,4-dihydroisoquinoline or 6,7-dimethoxy-3,4-dihydroisoquinoline under microwave conditions, naphth[1,2-e][1,3]oxazino[2,3-a]-isoquinoline derivatives were prepared in good yields. The latter reaction was extended by using 2-aminoarylmethyl-1-naphthols, leading to isomeric naphth-[2,1-e][1,3]oxazino[2,3-a] isoquinolines. Beside the detailed NMR spectroscopic and theoretical study of both stereochemistry and dynamic behaviour of these new conformational flexible heterocyclic ring systems an unexpected dynamic process between two diastereomers was observed in solution, studied by variable temperature H-1 NMR spectroscopy and the mechanism proved by theoretical DFT computations.}, language = {en} } @article{RasovicKochKleinpeteretal.2013, author = {Rasovic, Aleksandar and Koch, Andreas and Kleinpeter, Erich and Markovic, Rade}, title = {Studies of the regioselective ring-opening closing mode of functionally different thiazolidine type enaminones - en route to the synthesis of trithiaazapentalene derivatives}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {51}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2013.10.088}, pages = {10849 -- 10857}, year = {2013}, abstract = {Trithiaazapentalene derivatives were prepared by the reaction of 2-alkylidene-4-oxothiazolidines with Lawesson's reagent. They are classified as two structurally different trithiaazapentalene compounds that have different contributions of monocyclic 1,2-dithiole and 1,2,4-dithiazole structures and degrees of aromaticity of the bicyclic trithiaazapentalene system. The electron-donating ability of substituents at the C(5) position of the trithiaazapentalene system is recognized as the main cause for changes in pi-Celectron distribution. This is the first complete study of substituent effects on the structure of trithiapentalenes. (C) 2013 Elsevier Ltd. All rights reserved.}, language = {en} } @article{NeuvonenNeuvonenKochetal.2013, author = {Neuvonen, Kari and Neuvonen, Helmi and Koch, Andreas and Kleinpeter, Erich}, title = {Nature of the steric Omega(S), E-R and E-S ' substituent constants - comparison with the aid of NBO and STERIC analysis}, series = {Computational and theoretical chemistry}, volume = {1015}, journal = {Computational and theoretical chemistry}, number = {4}, publisher = {Elsevier}, address = {Amsterdam}, issn = {2210-271X}, doi = {10.1016/j.comptc.2013.03.025}, pages = {34 -- 43}, year = {2013}, abstract = {The nature of the major steric substituent constant scales for alkyl substituents, i.e. Omega(S), E-R and E-S' scales, was studied with the aid of the NBO and the natural steric (STERIC) analyses. Cyclohexyl esters R-3-CCOOC6H11 (R = alkyl or H) were used as the model compounds. Special emphasis was laid on the potential contribution of the polar component in these steric substituent parameters. In the light of our model the Omega(S) scale seems to be dominantly a steric substituent constant scale as is seen on the strengths of the good correlation between the Omega(S) constants of the CR3 group and the total steric exchange energy values E-TSEE for the model compounds. However, the Omega(S) values also seem to include a minor electronic component due to the varying electrostatic effect via the C alpha atom. On the other hand, E-R and E-S' parameters largely hinge on the size dependent polar effect of the CR3 alkyl group. By way of our model this repulsive interaction can be quantified by descriptor Delta q(OCO), the natural charge difference q(C)(C=O) - Sigma qO for the O-C(=O) functional group. Delta q(OCO) depends on the E-TSEE values, on qC alpha and on the polarization coefficients of the oxygen hybrid in the NBO of the pi(C=O) bond. The size sensitivity of the kinetic E-S' constants can be connected to variation of the Burgi-Dunitz angle in the transition state for the standard reaction used. A comparison is made for the q(C)(C=O) or Delta q(OCO) values computed on the one hand with the NBO formalism and on the other hand with the Hirshfeld formalism. A practical novel substituent constant q(C)(C=O) for the size of the alkyl groups is introduced.}, language = {en} } @article{KleinpeterWernerKoch2013, author = {Kleinpeter, Erich and Werner, Peter and Koch, Andreas}, title = {Push-pull allenes-conjugation, (anti)aromaticity and quantification of the push-pull character}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {11}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2013.01.027}, pages = {2436 -- 2445}, year = {2013}, abstract = {Structures, H-1/C-13 chemical shifts, and pi electron distribution/conjugation of an experimentally available and theoretically completed set of push-pull allenes Acc(2)C=C=CDon(2) (Acc=F, CHO, CF3, C N; Don=t-Bu, OMe, OEt, SMe, SEt, NCH2R) have been computed at the OFT level of theory. Both orthogonal linear and orthogonal bent structures have been obtained. In the latter case the push-pull character could be quantified by the quotient method. The C-13 chemical shift of the central allene carbon atom C-2 and chemical shift differences Delta delta(C-1, C-2) and Delta delta(C-2, C-3) of allene carbon atoms proved to be a quantitative alternative. TSNMRS of ring-closed push-pull allenes have been computed in addition and were employed to identify polar, carbene-like and carbone-like canonical structures of these molecules.}, language = {en} } @article{KleinpeterKoch2013, author = {Kleinpeter, Erich and Koch, Andreas}, title = {(Anti)aromaticity of dehydroannulenes of various ring size proved by the ring current effect in H-1 NMR spectra}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {5}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2012.12.019}, pages = {1481 -- 1488}, year = {2013}, abstract = {The spatial magnetic properties (Through-Space NMR Shieldings-TSNMRS) of already synthesized dehydro[n]annulenes of various ring size (from C-12 to C-20) have been computed, visualized as Isochemical Shielding Surfaces (ICSS) of various size and direction, and were examined subject to present (anti)aromaticity. For this purpose the thus quantified ring current effect of the macro cycles on proximate protons in proton NMR spectra was employed.}, language = {en} }