@article{IdzikCywinskiCranfieldetal.2011, author = {Idzik, Krzysztof Ryszard and Cywinski, Piotr J. and Cranfield, Charles G. and Mohr, Gerhard J. and Beckert, Rainer}, title = {Molecular recognition of the antiretroviral drug abacavir towards the development of a novel carbazole-based fluorosensor}, series = {Journal of fluorescence}, volume = {21}, journal = {Journal of fluorescence}, number = {3}, publisher = {Springer}, address = {New York}, issn = {1053-0509}, doi = {10.1007/s10895-010-0798-7}, pages = {1195 -- 1204}, year = {2011}, abstract = {Due to their optical and electro-conductive attributes, carbazole derivatives are interesting materials for a large range of biosensor applications. In this study, we present the synthesis routes and fluorescence evaluation of newly designed carbazole fluorosensors that, by modification with uracil, have a special affinity for antiretroviral drugs via either Watson-Crick or Hoogsteen base pairing. To an N-octylcarbazole-uracil compound, four different groups were attached, namely thiophene, furane, ethylenedioxythiophene, and another uracil; yielding four different derivatives. Photophysical properties of these newly obtained derivatives are described, as are their interactions with the reverse transcriptase inhibitors such as abacavir, zidovudine, lamivudine and didanosine. The influence of each analyte on biosensor fluorescence was assessed on the basis of the Stern-Volmer equation and represented by Stern-Volmer constants. Consequently we have demonstrated that these structures based on carbazole, with a uracil group, may be successfully incorporated into alternative carbazole derivatives to form biosensors for the molecular recognition of antiretroviral drugs.}, language = {en} } @article{VidadalaPimpalpalleLinkeretal.2011, author = {Vidadala, Srinivasa Rao and Pimpalpalle, Tukaram M. and Linker, Torsten and Hotha, Srinivas}, title = {Gold-Catalyzed reactions of 2-C-Branched carbohydrates mild glycosidations and selective anomerizations}, series = {European journal of organic chemistry}, journal = {European journal of organic chemistry}, number = {13}, publisher = {Wiley-Blackwell}, address = {Malden}, issn = {1434-193X}, doi = {10.1002/ejoc.201100134}, pages = {2426 -- 2430}, year = {2011}, abstract = {2-C-branched methyl glycosides react with various alcohols under gold catalysis to transglycosylated products. The method is applicable for the convenient synthesis of disaccharides. Without nucleophile a selective anomerization occurs, giving first access to alpha-configured 2-C-nitromethyl glycosides. The results are interesting for the mechanism of gold-catalyzed glycosidations.}, language = {en} } @article{PrietoShkilnyyRumplaschetal.2011, author = {Prieto, Susana and Shkilnyy, Andriy and Rumplasch, Claudia and Ribeiro, Artur and Javier Arias, F. and Carlos Rodriguez-Cabello, Jose and Taubert, Andreas}, title = {Biomimetic calcium phosphate mineralization with multifunctional elastin-like recombinamers}, series = {Biomacromolecules : an interdisciplinary journal focused at the interface of polymer science and the biological sciences}, volume = {12}, journal = {Biomacromolecules : an interdisciplinary journal focused at the interface of polymer science and the biological sciences}, number = {5}, publisher = {American Chemical Society}, address = {Washington}, issn = {1525-7797}, doi = {10.1021/bm200287c}, pages = {1480 -- 1486}, year = {2011}, abstract = {Biomimetic hybrid materials based on a polymeric and an inorganic component such as calcium phosphate are potentially useful for bone repair. The current study reports on a new approach toward biomimetic hybrid materials using a set of recombinamers (recombinant protein materials obtained from a synthetic gene) as crystallization additive for calcium phosphate. The recombinamers contain elements from elastin, an elastic structural protein, and statherin, a salivary protein. Via genetic engineering, the basic elastin sequence was modified with the SN(A)15 domain of statherin, whose interaction with calcium phosphate is well-established. These new materials retain the biocompatibility, "smart" nature, and desired mechanical behavior of the elastin-like recombinamer (ELR) family. Mineralization in simulated body fluid (SBF) in the presence of these recombinamers reveals surprising differences. Two of the polymers inhibit calcium phosphate deposition (although they contain the statherin segment). In contrast, the third polymer, which has a triblock structure, efficiently controls the calcium phosphate formation, yielding spherical hydroxyapatite (HAP) nanoparticles with diameters from 1 to 3 nm after 1 week in SBF at 37 degrees C. However, at lower temperatures, no precipitation is observed with any of the polymers. The data thus suggest that the molecular design of ELRs containing statherin segments and the selection of an appropriate polymer structure are key parameters to obtain functional materials for the development of intelligent systems for hard tissue engineering and subsequent in vivo applications.}, language = {en} } @article{KafkaHaukeSalcinovicetal.2011, author = {Kafka, Stanislav and Hauke, Sylvia and Salcinovic, Arjana and Soidinsalo, Otto and Urankar, Damijana and Kosmrlj, Janez}, title = {Copper(I)-Catalyzed [3+2] Cycloaddition of 3-Azidoquinoline-2,4(1H,3H)-diones with terminal alkynes}, series = {Molecules}, volume = {16}, journal = {Molecules}, number = {5}, publisher = {MDPI}, address = {Basel}, issn = {1420-3049}, doi = {10.3390/molecules16054070}, pages = {4070 -- 4081}, year = {2011}, abstract = {3-Azidoquinoline-2,4(1H,3H)-diones 1, which are readily available from 4-hydroxyquinolin-2(1H)-ones 4 via 3-chloroquinoline-2,4(1H, 3H)-diones 5, afford, in copper(I)-catalyzed [3 + 2] cycloaddition reaction with terminal acetylenes, 1,4-disubstituted 1,2,3-triazoles 3 in moderate to excellent yields. The structures of compounds 3 were confirmed by (1)H and (13)C-NMR spectroscopy, combustion analyses and mass spectrometry.}, language = {en} } @article{DudekCleggGlassonetal.2011, author = {Dudek, Melanie and Clegg, Jack K. and Glasson, Christopher R. K. and Kelly, Norman and Gloe, Kerstin and Gloe, Karsten and Kelling, Alexandra and Buschmann, Hans-J{\"u}rgen and Jolliffe, Katrina A. and Lindoy, Leonard F. and Meehan, George V.}, title = {Interaction of Copper(II) with Ditopic Pyridyl-beta-diketone Ligands dimeric, framework, and metallogel structures}, series = {Crystal growth \& design : integrating the fields of crystal engineering and crystal growth for the synthesis and applications of new materials}, volume = {11}, journal = {Crystal growth \& design : integrating the fields of crystal engineering and crystal growth for the synthesis and applications of new materials}, number = {5}, publisher = {American Chemical Society}, address = {Washington}, issn = {1528-7483}, doi = {10.1021/cg101629w}, pages = {1697 -- 1704}, year = {2011}, abstract = {The interaction of Cu(II) with three beta-diketone ligands of type R(1)C(O)CH(2)C(O)R(2) (where R(1) = 2-, 3-, or 4-pyridyl and R(2) = C(6)H(5), respectively), HL(1)-HL(3), along with the X-ray structures and the pK(a) values of each ligand, are reported. HL(1) yields a dimeric complex of type [Cu(L(1))(2)](2). In this structure, two deprotonated HL(1) ligands coordinate in a trans planar fashion around each Cu(II) center, one oxygen from each CuL(2) unit bridges to an axial site of the second complex unit such that both Cu(II) centers attain equivalent five-coordinate square pyramidal geometries. The two-substituted pyridyl groups in this complex do not coordinate, perhaps reflecting steric factors associated with the closeness of the pyridyl nitrogen to the attached (conjugated) beta-diketonato backbone of each ligand. The remaining two Cu(II) species, derived from HL(2) and HL(3), are both coordination polymers of type [Cu(L)(2)](n) in which the terminal pyridine group of each ligand is intermolecularly linked to an adjacent copper center to generate the respective infinite structures. HL(2) was also demonstrated to form a fibrous metallogel when reacted with CuCl(2) in an acetonitrile/water mixture under defined conditions.}, language = {en} } @article{FechnerKoetz2011, author = {Fechner, Mabya and Koetz, Joachim}, title = {Polyampholyte-Surfactant film tuning in reverse microemulsions}, series = {Langmuir}, volume = {27}, journal = {Langmuir}, number = {9}, publisher = {American Chemical Society}, address = {Washington}, issn = {0743-7463}, doi = {10.1021/la200791k}, pages = {5316 -- 5323}, year = {2011}, abstract = {The pH-dependent influence of two different strongly alternating copolymers [poly(N,N'-diallyl-N,N'-dimethylammonium-alt-N-phenylmaleamic carboxylate) (PalPh) and poly(N,N'-diallyl-N,a-dimethylammonium-alt-3,5-bis(carboxyphenyl) maleamic carboxylate) (PalPhBisCarb)] based on N,N'-diallyl-N, -dimethylarnmonium chloride and maleamic acid derivatives on the phase behavior of a water-in-oil (w/o) microemulsion system made from toluene pentanol (1:1) and sodium dodecyl sulfate was investigated. It was shown that the optically dear phase range can be extended after incorporation of these copolymers, leading to an increased water solubilization capacity. Additionally, the required amount of surfactant to establish a clear w/o microemulsion depends on the pH value, which means the hydrophobicity of the copolymers. Conductivity measurements show that droplet droplet interactions in the w/o microemulsion are decreased at acidic but increased at alkaline pH in the presence of the copolymers. From differenctial scanning calorimetry measurements one can further conclude that these results are in agreement with a change of the position of the copolymer in the interfacial region of the surfactant film. The more hydrophobic PalPh can be directly incorporated into the surfactant film, whereas the phenyl groups of PalPhBisCarb flip into the water core by increasing the pH value.}, language = {en} } @article{Tremblay2011, author = {Tremblay, Jean Christophe}, title = {Laser control of molecular excitations in stochastic dissipative media}, series = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, volume = {134}, journal = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, number = {17}, publisher = {American Institute of Physics}, address = {Melville}, issn = {0021-9606}, doi = {10.1063/1.3587093}, pages = {16}, year = {2011}, abstract = {In the present work, ideas for controlling photochemical reactions in dissipative environments using shaped laser pulses are presented. New time-local control algorithms for the stochastic Schrodinger equation are introduced and compared to their reduced density matrix analog. The numerical schemes rely on time-dependent targets for guiding the reaction along a preferred path. The methods are tested on the vibrational control of adsorbates at metallic surfaces and on the ultrafast electron dynamics in a strong dissipative medium. The selective excitation of the specific states is achieved with improved yield when using the new algorithms. Both methods exhibit similar convergence behavior and results compare well with those obtained using local optimal control for the reduced density matrix. The favorable scaling of the methods allows to tackle larger systems and to control photochemical reactions in dissipative media of molecules with many more degrees of freedom.}, language = {en} } @article{AdamovichMirskovaMirskovetal.2011, author = {Adamovich, Sergey N. and Mirskova, Anna N. and Mirskov, Rudolf G. and Schilde, Uwe}, title = {Synthesis and crystal structure of 1,4,10,13-tetraoxa-7,16-diazoniumcyclo-octadecane bis(4-chloro-2-methyl-phenoxyacetate)}, series = {Chemistry central journal}, volume = {5}, journal = {Chemistry central journal}, number = {17}, publisher = {BioMed Central}, address = {London}, issn = {1752-153X}, doi = {10.1186/1752-153X-5-23}, pages = {4}, year = {2011}, abstract = {The title compound was prepared by the reaction of 1,4,10,13-tetraoxa-7,16-diazacyclo-octadecane with 4-chloro-2-methyl-phenoxyacetic acid in a ratio of 1:2. The structure has been proved by the data of elemental analysis, IR spectroscopy, NMR ((1)H, (13)C) technique and by X-ray diffraction analysis. Intermolecular hydrogen bonds between the azonium protons and oxygen atoms of the carboxylate groups were found. Immunoactive properties of the title compound have been screened. The compound has the ability to suppress spontaneous and Con A-stimulated cell proliferation in vitro and therefore can be considered as immunodepressant.}, language = {en} } @article{BaranacStojanovicKeinpeter2011, author = {Baranac-Stojanovic, Marija and Keinpeter, Erich}, title = {Quantification of the aromaticity of 2-Alkylidenethiazolines subjected to push-pull activity}, series = {The journal of organic chemistry}, volume = {76}, journal = {The journal of organic chemistry}, number = {10}, publisher = {American Chemical Society}, address = {Washington}, issn = {0022-3263}, doi = {10.1021/jo200294f}, pages = {3861 -- 3871}, year = {2011}, abstract = {Through-space NMR shieldings (TSNMRSs) of a series of 2-alkylidenethiazolines subjected to push-pull activity have been calculated by the GIAO method employing the nucleus-independent chemical shift (NICS) concept and visualized as iso-chemical-shielding surfaces (ICSSs). The ICSSs were applied to quantify and visualize the degree of aromaticity of the studied compounds, which has been shown to be in excellent correlation with the push-pull behavior, quantified by the quotient (pi*/pi) method. Dissection of the absolute magnetic shielding values into individual contributions of bonds and lone pairs by the natural chemical shielding-natural bond orbital (NCS-NBO) analysis has revealed unexpected details.}, language = {en} } @article{PoghosyanArsenyanGharabekyanetal.2011, author = {Poghosyan, Armen H. and Arsenyan, Levon H. and Gharabekyan, Hrant H. and Falkenhagen, Sandra and Koetz, Joachim and Shahinyan, Aram A.}, title = {Molecular dynamics simulations of inverse sodium dodecyl sulfate (SDS) micelles in a mixed toluene/pentanol solvent in the absence and presence of poly(diallyldimethylammonium chloride) (PDADMAC)}, series = {Journal of colloid and interface science}, volume = {358}, journal = {Journal of colloid and interface science}, number = {1}, publisher = {Elsevier}, address = {San Diego}, issn = {0021-9797}, doi = {10.1016/j.jcis.2011.01.091}, pages = {175 -- 181}, year = {2011}, abstract = {We have performed a 15 ns molecular dynamics simulation of inverse sodium dodecyl sulfate (SDS) micelles in a mixed toluene/pentanol solvent in the absence and presence of a cationic polyelectrolyte, i.e. poly(diallyldimethylammonium chloride) (PDADMAC). The NAMD code and CHARMM force field were used. During the simulation time, the radii of SOS inverse micelles changed and the radii of the water droplets have been calculated. The behavior of SDS hydrocarbon chains has been characterized by calculating the orientation order parameter and the chain average length. The water droplet properties (water flow, water molecules displacement) have been examined. In summary the MD simulations indicate a more rigid and ordered surfactant film due to the formation of a polyelectrolyte palisade layer in full agreement with the experimental findings, e.g. the viscosity increase and shift of the percolation boundary.}, language = {en} }