@phdthesis{Schmidt2020, author = {Schmidt, Bernhard V. K. J.}, title = {Polymers, self-assembly and materials}, doi = {10.25932/publishup-48481}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-484819}, school = {Universit{\"a}t Potsdam}, pages = {VI, 350}, year = {2020}, abstract = {In der vorliegenden Arbeit wurden die Selbstorganisation von hydrophilen Polymeren, verst{\"a}rkte Hydrogele, sowie anorganische/Polymer Hybridmaterialien untersucht. Dabei beschreibt die Arbeit den Weg von Polymersynthese mittels verschiedener Methoden {\"u}ber Polymerselbstanordnung bis zur Herstellung von Polymermaterialien mit vielversprechenden Eigenschaften f{\"u}r zuk{\"u}nftige Anwendungen. Hydrophile Polymere wurden verwendet, um Mehrphasensysteme herzustellen, Wasser-in-Wasser Emulsionen zu bilden und selbstangeordneten Strukturen zu erzeugen, z. B. Partikel/Aggregate oder hohle Strukturen aus komplett wasserl{\"o}slichen Bausteinen. Die Strukturbildung in w{\"a}ssriger Umgebung wurde ferner f{\"u}r supramolekulare Hydrogele mit definierter Unterstruktur und reversiblem Gelierungsverhalten eingesetzt. Auf dem Gebiet der Hydrogele wurde das anorganische Material graphitisches Kohlenstoffnitrid (g-CN) als Photoinitiator f{\"u}r die Hydrogelsynthese und als Verst{\"a}rker der Gelstruktur beschrieben. Hierbei konnten Hydrogele mit herausragenden Eigenschaften generiert werden, z. B. hohe Kompressibilit{\"a}t, hohe Speichermodule oder Gleitf{\"a}higkeit. Die Kombinationen von g-CN mit verschiedenen Polymeren erlaubte es zudem neue Materialien f{\"u}r die Photokatalyse bereitzustellen. Als weiteres anorganisches Material wurden Metall-organische Ger{\"u}ste (MOFs) mit Polymeren kombiniert. Es konnte gezeigt werden, dass die Verwendung von MOFs in der Polymersynthese einen starken Einfluss auf die erzeugte Polymerstruktur hat und MOFs als Katalysator f{\"u}r Polymerisationen verwendet werden k{\"o}nnen. Zuletzt wurde die MOF Synthese an sich untersucht, wobei Polymeradditive oder L{\"o}sungsmittel eingesetzt wurden um die kristalline Struktur der MOFs zu modulieren. Insgesamt wurden hier verschiedene Errungenschaften f{\"u}r die Polymerchemie beschrieben, z.B. neuartige hydrophile Polymere und Hydrogele, die zur Zeit wichtige Materialien im Polymerbereich durch ihre vielversprechenden Anwendungen im biomedizinischen Sektor darstellen. Außerdem ergab die Kombination von Polymeren mit Materialien aus anderen Bereichen der Chemie, z. B. g-CN und MOFs, neue Materialien mit bemerkenswerten Eigenschaften, die ebenfalls von Interesse f{\"u}r zuk{\"u}nftige Anwendungen sind, z. B. Beschichtungen, Partikeltechnologie und Katalyse.}, language = {en} } @misc{HeyneArltGessneretal.2020, author = {Heyne, Benjamin and Arlt, Kristin and Geßner, Andr{\´e} and Richter, Alexander F. and D{\"o}blinger, Markus and Feldmann, Jochen and Taubert, Andreas and Wedel, Armin}, title = {Mixed Mercaptocarboxylic Acid Shells Provide Stable Dispersions of InPZnS/ZnSe/ZnS Multishell Quantum Dots in Aqueous Media}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {1026}, issn = {1866-8372}, doi = {10.25932/publishup-48603}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-486032}, pages = {26}, year = {2020}, abstract = {Highly luminescent indium phosphide zinc sulfide (InPZnS) quantum dots (QDs), with zinc selenide/zinc sulfide (ZnSe/ZnS) shells, were synthesized. The QDs were modified via a post-synthetic ligand exchange reaction with 3-mercaptopropionic acid (MPA) and 11-mercaptoundecanoic acid (MUA) in different MPA:MUA ratios, making this study the first investigation into the effects of mixed ligand shells on InPZnS QDs. Moreover, this article also describes an optimized method for the correlation of the QD size vs. optical absorption of the QDs. Upon ligand exchange, the QDs can be dispersed in water. Longer ligands (MUA) provide more stable dispersions than short-chain ligands. Thicker ZnSe/ZnS shells provide a better photoluminescence quantum yield (PLQY) and higher emission stability upon ligand exchange. Both the ligand exchange and the optical properties are highly reproducible between different QD batches. Before dialysis, QDs with a ZnS shell thickness of ~4.9 monolayers (ML), stabilized with a mixed MPA:MUA (mixing ratio of 1:10), showed the highest PLQY, at ~45\%. After dialysis, QDs with a ZnS shell thickness of ~4.9 ML, stabilized with a mixed MPA:MUA and a ratio of 1:10 and 1:100, showed the highest PLQYs, of ~41\%. The dispersions were stable up to 44 days at ambient conditions and in the dark. After 44 days, QDs with a ZnS shell thickness of ~4.9 ML, stabilized with only MUA, showed the highest PLQY, of ~34\%.}, language = {en} } @misc{Koetz2020, author = {Koetz, Joachim}, title = {The Effect of Surface Modification of Gold Nanotriangles for Surface-Enhanced Raman Scattering Performance}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {1022}, issn = {1866-8372}, doi = {10.25932/publishup-48517}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-485172}, pages = {15}, year = {2020}, abstract = {A surface modification of ultraflat gold nanotriangles (AuNTs) with different shaped nanoparticles is of special relevance for surface-enhanced Raman scattering (SERS) and the photo-catalytic activity of plasmonic substrates. Therefore, different approaches are used to verify the flat platelet morphology of the AuNTs by oriented overgrowth with metal nanoparticles. The most important part for the morphological transformation of the AuNTs is the coating layer, containing surfactants or polymers. By using well established AuNTs stabilized by a dioctyl sodium sulfosuccinate (AOT) bilayer, different strategies of surface modification with noble metal nanoparticles are possible. On the one hand undulated superstructures were synthesized by in situ growth of hemispherical gold nanoparticles in the polyethyleneimine (PEI)-coated AOT bilayer of the AuNTs. On the other hand spiked AuNTs were obtained by a direct reduction of Au³⁺ ions in the AOT double layer in presence of silver ions and ascorbic acid as reducing agent. Additionally, crumble topping of the smooth AuNTs can be realized after an exchange of the AOT bilayer by hyaluronic acid, followed by a silver-ion mediated reduction with ascorbic acid. Furthermore, a decoration with silver nanoparticles after coating the AOT bilayer with the cationic surfactant benzylhexadecyldimethylammonium chloride (BDAC) can be realized. In that case the ultraviolet (UV)-absorption of the undulated Au@Ag nanoplatelets can be tuned depending on the degree of decoration with silver nanoparticles. Comparing the Raman scattering data for the plasmon driven dimerization of 4-nitrothiophenol (4-NTP) to 4,4′-dimercaptoazobenzene (DMAB) one can conclude that the most important effect of surface modification with a 75 times higher enhancement factor in SERS experiments becomes available by decoration with gold spikes.}, language = {en} } @phdthesis{Harmanli2020, author = {Harmanli, İpek}, title = {Towards catalytic activation of nitrogen in ionic liquid/nanoporous carbon interfaces for electrochemical ammonia synthesis}, doi = {10.25932/publishup-48359}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-483591}, school = {Universit{\"a}t Potsdam}, pages = {v, 126}, year = {2020}, abstract = {Ammonia is a chemical of fundamental importance for nature`s vital nitrogen cycle. It is crucial for the growth of living organisms as well as food and energy source. Traditionally, industrial ammonia production is predominated by Haber- Bosch process (HBP) which is based on direct conversion of N2 and H2 gas under high temperature and high pressure (~500oC, 150-300 bar). However, it is not the favorite route because of its thermodynamic and kinetic limitations, and the need for the energy intense production of hydrogen gas by reforming processes. All these disfavors of HBP open a target to search for an alternative technique to perform efficient ammonia synthesis via electrochemical catalytic processes, in particular via water electrolysis, using water as the hydrogen source to save the process from gas reforming. In this study, the investigation of the interface effects between imidazolium-based ionic liquids and the surface of porous carbon materials with a special interest in the nitrogen absorption capability. As the further step, the possibility to establish this interface as the catalytically active area for the electrochemical N2 reduction to NH3 has been evaluated. This particular combination has been chosen because the porous carbon materials and ionic liquids (IL) have a significant importance in many scientific fields including catalysis and electrocatalysis due to their special structural and physicochemical properties. Primarily, the effects of the confinement of ionic liquid (EmimOAc, 1-Ethyl-3-methylimidazolium acetate) into carbon pores have been investigated. The salt-templated porous carbons, which have different porosity (microporous and mesoporous) and nitrogen species, were used as model structures for the comparison of the IL confinement at different loadings. The nitrogen uptake of EmimOAc can be increased by about 10 times by the confinement in the pores of carbon materials compared to the bulk form. In addition, the most improved nitrogen absorption was observed by IL confinement in micropores and in nitrogen-doped carbon materials as a consequence of the maximized structural changes of IL. Furthermore, the possible use of such interfaces between EmimOAc and porous carbon for the catalytic activation of dinitrogen during the kinetically challenging NRR due to the limited gas absorption in the electrolyte, was examined. An electrocatalytic NRR system based on the conversion of water and nitrogen gas to ammonia at ambient operation conditions (1 bar, 25 °C) was performed in a setup under an applied electric potential with a single chamber electrochemical cell, which consists of the combination of EmimOAc electrolyte with the porous carbon-working electrode and without a traditional electrocatalyst. Under a potential of -3 V vs. SCE for 45 minutes, a NH3 production rate of 498.37 μg h-1 cm-2 and FE of 12.14\% were achieved. The experimental observations show that an electric double-layer, which serves the catalytically active area, occurs between a microporous carbon material and ions of the EmimOAc electrolyte in the presence of sufficiently high provided electric potential. Comparing with the typical NRR systems which have been reported in the literature, the presented electrochemical ammonia synthesis approach provides a significantly higher ammonia production rate with a chance to avoid the possible kinetic limitations of NRR. In terms of operating conditions, ammonia production rate and the faradic efficiency without the need for any synthetic electrocatalyst can be resulted of electrocatalytic activation of nitrogen in the double-layer formed between carbon and IL ions.}, language = {en} } @phdthesis{Buechele2020, author = {B{\"u}chele, Dominique}, title = {Entwicklung einer robusten Online-Methode zur Bestimmung von N{\"a}hrelementen in Ackerb{\"o}den mit einem Energie-dispersiven RFA-Sensor}, doi = {10.25932/publishup-48373}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-483735}, school = {Universit{\"a}t Potsdam}, pages = {IX, 106, XLV}, year = {2020}, abstract = {Im Rahmen der vom Bundesministerium f{\"u}r Bildung und -forschung gef{\"o}rderten Forschungsinitiative „BonaRes - Boden als nachhaltige Ressource der Bio{\"o}konomie" soll sich das Teilprojekt „I4S - integrated system for site-specific soil fertility management" der Entwicklung eines integrierten Systems zum ortsspezifischen Management der Bodenfruchtbarkeit widmen. Hierf{\"u}r ist eine Messplattform zur Bestimmung relevanter Bodeneigenschaften und der quantitativen Analyse ausgew{\"a}hlter Makro- und Mikron{\"a}hrstoffe geplant. In der ersten Phase dieses Projekts liegt das Hauptaugenmerk auf der Kalibrierung und Validierung der verschiedenen Sensoren auf die Matrix Boden, der Probennahme auf dem Acker und der Planung sowie dem Aufbau der Messplattform. Auf dieser Plattform sollen in der zweiten Phase des Projektes die verschiedenen Bodensensoren installiert, sowie Modelle und Entscheidungsalgorithmen zur Steuerung der D{\"u}ngung und dementsprechend Verbesserung der Bodenfunktionen erstellt werden. Ziel der vorliegenden Arbeit ist die Grundlagenuntersuchung und Entwicklung einer robusten Online-Analyse mittels Energie-dispersiver R{\"o}ntgenfluoreszenzspektroskopie (EDRFA) zur Quantifizierung ausgew{\"a}hlter Makro- und Mikron{\"a}hrstoffe in B{\"o}den f{\"u}r eine kosteng{\"u}nstige und fl{\"a}chendeckende Kartierung von Ackerfl{\"a}chen. F{\"u}r die Entwicklung eines Online-Verfahrens wurde ein dem Stand der Technik entsprechender R{\"o}ntgenfluoreszenzmesskopf in Betrieb genommen und die dazugeh{\"o}rigen Ger{\"a}teparameter auf die Matrix Boden optimiert. Die Bestimmung der analytischen Qualit{\"a}ts-merkmale wie Pr{\"a}zision und Nachweisgrenzen fand f{\"u}r eine Auswahl an N{\"a}hrelementen von Aluminium bis Zink statt. Um eine m{\"o}glichst Matrix-angepasste Kalibrierung zu erhalten, wurde sowohl mit zertifizierten Referenzmaterialien (CRM), als auch mit Ackerb{\"o}den kalibriert. Da einer der gr{\"o}ßten Nachteile der R{\"o}ntgenfluoreszenzanalyse die Beeinflussung durch Matrixeffekte ist, wurde neben der klassischen univariaten Datenauswertung auch die chemometrische multivariate Methode der Partial Least Squares Regression (PLSR) eingesetzt. Die PLSR bietet dabei den Vorteil, Matrixeffekte auszugleichen, wodurch robustere Kalibriermodelle erhalten werden k{\"o}nnen. Zus{\"a}tzlich wurde eine Hauptkomponentenanalyse (PCA) durchgef{\"u}hrt, um Gemeinsamkeiten und Ausreißer innerhalb des Probensets zu identifizieren. Es zeigte sich, dass eine Klassifizierung der B{\"o}den anhand ihrer Textur Sand, Schluff, Lehm und Ton m{\"o}glich ist. Aufbauend auf den Ergebnissen idealer Bodenproben (zu Tabletten gepresste luftgetrocknete Proben mit Korngr{\"o}ßen < 0,5 mm) wurde im Verlauf dieser Arbeit die Probenvorbereitung immer weiter reduziert und der Einfluss verschiedener Kenngr{\"o}ßen untersucht. Diese Einflussfaktoren k{\"o}nnen die Dichte und die Homogenit{\"a}t der Probe, sowie Korngr{\"o}ßeneffekte und die Feuchtigkeit sein. Anhand des RMSE (Wurzel der mittleren Fehlerquadratsumme) und unter Ber{\"u}cksichtigung der Residuen werden die jeweils erstellten Kalibriermodelle miteinander verglichen. Um die G{\"u}te der Modelle zu bewerten, wurden diese mit einem Testset validiert. Hierf{\"u}r standen 662 Bodenproben von 15 verschiedenen Standorten in Deutschland zur Verf{\"u}gung. Da die Ergebnisse an gepressten Tabletten f{\"u}r die Elemente Al, Si, K, Ca, Ti, Mn, Fe und Zn den Anforderungen f{\"u}r eine sp{\"a}tere Online-Analyse entsprechen, wurden im weiteren Verlauf dieser Arbeit Kalibriermodelle mit losen Bodenproben erstellt. Auch hier konnten gute Ergebnisse durch ausreichende Nachweisgrenzen und eine niedrige gemittelte Messabweichung bei der Vorhersage unbekannter Testproben erzielt werden. Es zeigte sich, dass die Vorhersagef{\"a}higkeit mit der multivariaten PLSR besser ist als mit der univariaten Datenauswertung, insbesondere f{\"u}r die Elemente Mn und Zn. Der untersuchte Einfluss der Feuchtigkeit und der Korngr{\"o}ßen auf die Quantifizierung der Elementgehalte war vor allem bei leichteren Elementen deutlich zu sehen. Es konnte schließlich eine multivariate Kalibrierung unter Ber{\"u}cksichtigung dieser Faktoren f{\"u}r die Elemente Al bis Zn erstellt werden, so dass ein Einsatz an B{\"o}den auf dem Acker m{\"o}glich sein sollte. Eine h{\"o}here Messunsicherheit muss dabei einkalkuliert werden. F{\"u}r eine sp{\"a}tere Probennahme auf dem Feld wurde zudem der Unterschied zwischen statischen und dynamischen Messungen betrachtet, wobei sich zeigte, dass beide Varianten genutzt werden k{\"o}nnen. Zum Abschluss wurde der hier eingesetzte Sensor mit einem kommerziell erh{\"a}ltlichen Hand-Ger{\"a}t auf sein Quantifizierungspotential hin verglichen. Der Sensor weist anhand seiner Ergebnisse ein großes Potential als Online-Sensor f{\"u}r die Messplattform auf. Die Ergebnisse unter Laborbedingungen zeigen, dass eine robuste Analyse Ackerb{\"o}den unter Ber{\"u}cksichtigung der Einflussfaktoren m{\"o}glich ist.}, language = {de} } @phdthesis{Ilic2020, author = {Ilic, Ivan}, title = {Design of sustainable cathodes for Li-ion batteries}, doi = {10.25932/publishup-48368}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-483689}, school = {Universit{\"a}t Potsdam}, pages = {iv, 154}, year = {2020}, abstract = {In recent years people have realised non-renewability of our modern society which relays on spending huge amounts of energy mostly produced from fosil fuels, such as oil and coal, and the shift towards more sustainable energy sources has started. However, sustainable sources of energy, such as wind-, solar- and hydro-energy, produce primarily electrical energy and can not just be poured in canister like many fosil fuels, creating necessity for rechragable batteries. However, modern Li-ion batteries are made from toxic heavy metals and sustainable alternatives are needed. Here we show that naturally abundant catecholic and guaiacyl groups can be utilised to replace heavy metals in Li-ion batteries. Foremost vanillin, a naturally occurring food additive that can be sustainably synthesised from industrial biowaste, lignin, was utilised to synthesise materials that showed extraordinary performance as cathodes in Li-ion batteries. Furthermore, behaviour of catecholic and guiacyl groups in Li-ion system was compared, confirming usability of guiacayl containing biopolymers as cathodes in Li-ion batteries. Lastly, naturally occurring polyphenol, tannic acid, was incorporated in fully bioderived hybrid material that shows performance comparable to commercial Li-ion batteries and good stability. This thesis presents an important advancement in understanding of biowaste derived cathode materials for Li-ion batteries. Further research should be conducted to better understand behaviour of guaiacyl groups during Li-ion battery cycling. Lastly, challenges of incorporation of lignin, an industrial biowaste, have to be addressed and lignin should be incorporated as a cathode material in Li-ion batteries.}, language = {en} } @phdthesis{Markushyna2020, author = {Markushyna, Yevheniia}, title = {Modern photoredox transformations applied to the needs of organic synthesis}, doi = {10.25932/publishup-47766}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-477661}, school = {Universit{\"a}t Potsdam}, pages = {275}, year = {2020}, abstract = {Abstract. Catalysis is one of the most effective tools for the highly efficient assembly of complex molecular structures. Nevertheless, it is mainly represented by transition metal-based catalysts and typically is an energy consuming process. Therefore, photocatalysis utilizing solar energy is one of the appealing approaches to overcome these problems. A great alternative to classic transition metal-based photocatalysts, carbon nitrides, a group of organic polymeric semiconductors, have already shown their efficiency in water splitting, CO2 reduction, and organic pollutants degradation. However, these materials have also a great potential for the use in functionalization of complex organic molecules for synthetic needs as it was shown in recent years. This work addresses the challenge to develop efficient system for heterogeneous organic photocatalysis, employing cheap and environmentally benign photocatalysts - carbon nitrides. Herein, fundamental properties of semiconductors are studied from the organic chemistry standpoint; the inherent properties of carbon nitrides, such as ability to accumulate electrons, are deeply investigated and their effect on the reaction outcome is established. Thus, understanding of the electron charging processes allowed for the synthesis of otherwise hardly-achieved diazetidines-1,3 by tetramerization of benzylamines. Furthermore, the high electron capacity of Potassium Poly(heptazine imide)s (K-PHI) made possible a multi-electron reduction of aromatic nitro compounds to bare or formylated anilines. Additionally, two deep eutectic solvents (DES) were designed as a sustainable reaction media and reducing reagent for this reaction. Eventually, the high oxidation ability of carbon nitride K-PHI is employed in a challenging reaction of halide anion oxidation (Cl―, Br―) to accomplish electrophilic substitution in aromatic ring. The possibility to utilize NaCl solution (seawater mimetic) for the chlorination of electron rich arenes was shown. Eventually, light itself is used as a tool in a chromoselective photocatalytic oxidation of aromatic thiols and thioacetatas to three different compounds, using UV, blue, and red LEDs. All in all, the work enhances understanding the mechanism of heterogeneous photocatalysis in synthetic organic reactions and therefore, is a step forward to the sustainable methods of synthesis in organic chemistry.}, language = {en} } @phdthesis{Chao2020, author = {Chao, Madlen}, title = {Entwicklung und Validierung eines Online-LIBS-Verfahrens f{\"u}r die Bestimmung von N{\"a}hrelementen in B{\"o}den}, doi = {10.25932/publishup-47677}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-476772}, school = {Universit{\"a}t Potsdam}, pages = {XII, 130}, year = {2020}, abstract = {In den letzten Jahrzehnten ist die Nachfrage nach kosteng{\"u}nstigen und fl{\"a}chendeckenden Kartierungsm{\"o}glichkeiten im Hinblick auf eine ertragssteigernde und umweltfreundlichere Bewirtschaftung von landwirtschaftlichen Nutzfl{\"a}chen stark gestiegen. Hierf{\"u}r eignen sich spektroskopische Methoden wie die R{\"o}ntgenfluoreszenzanalyse (RFA), Raman- und Gammaspektroskopie sowie die laserinduzierte Plasmaspektroskopie (LIBS). In Abh{\"a}ngigkeit von der Funktionsweise der jeweiligen Methoden werden Informationen zu verschiedensten Bodeneigenschaften wie N{\"a}hrelementgehalt, Textur und pH-Wert erhalten. Ziel dieser Arbeit ist die Entwicklung eines Online-LIBS-Verfahrens zur N{\"a}hrelementbestimmmung und Kartierung von Ackerfl{\"a}chen. Die LIBS ist eine schnelle und simultane Multielementanalyse bei der durch das Fokussieren eines hochenergetischen Laserpulses Probenmaterial von der Probenoberfl{\"a}che ablatiert wird und in ein Plasma {\"u}berf{\"u}hrt wird. Beim Abk{\"u}hlen des Plasmas wird Strahlung emittiert, welche R{\"u}ckschl{\"u}sse {\"u}ber die elementare Zusammensetzung der Probe gibt. Diese Arbeit ist im Teilprojekt I4S (Intelligenz f{\"u}r B{\"o}den) im Forschungsprogramm BonaRes (Boden als nachhaltige Ressource f{\"u}r die Bio{\"o}konomie) des Bundesministerium f{\"u}r Bildung und Forschung (BMBF) entstanden. Es wurden insgesamt 651 Bodenproben von verschiedenen Test-Agrarfl{\"a}chen unterschiedlichster Standorte Deutschlands gemessen, ausgewertet und zu Validierungszwecken mit entsprechender Referenzanalytik wie die Optische Emissionsspektroskopie mittels induktiv gekoppeltem Plasma (ICP-OES) und die wellenl{\"a}ngendispersive R{\"o}ntgenfluoreszenzanalyse (WDRFA) charakterisiert. F{\"u}r die Quantifizierung wurden zun{\"a}chst die Messparameter des LIBS-Systems auf die Bodenmatrix optimiert und f{\"u}r die Elemente geeignete Linien ausgew{\"a}hlt sowie deren Nachweisgrenzen bestimmt. Es hat sich gezeigt, dass eine absolute Quantifizierung basierend auf einem univariaten Ansatz aufgrund der starken Matrixeffekte und der schlechten Reproduzierbarkeit des Plasmas nur eingeschr{\"a}nkt m{\"o}glich ist. Bei Verwendung eines multivariaten Ansatz wie der Partial Least Squares Regression (PLSR) f{\"u}r die Kalibrierung konnten f{\"u}r die N{\"a}hrelemente im Vergleich zur univariaten Variante Analyseergebnisse mit h{\"o}herer G{\"u}te und geringeren Messunsicherheiten ermittelt werden. Die Untersuchungen haben gezeigt, dass das multivariate Modell weiter verbessert werden kann, indem mit einer Vielzahl von gut analysierten B{\"o}den verschiedener Standorte, Bodenarten und einem breiten Gehaltsbereich kalibriert wird. Mithilfe der Hauptkomponentenanalyse (PCA) wurde eine Klassifizierung der B{\"o}den nach der Textur realisiert. Weiterhin wurde auch eine Kalibrierung mit losem Bodenmaterial erstellt. Trotz der Signalabnahme konnten f{\"u}r die verschiedenen N{\"a}hrelemente Kalibriergeraden mit ausreichender, analytischer G{\"u}te erstellt werden. F{\"u}r den Einsatz auf dem Acker wurde außerdem der Einfluss von Korngr{\"o}ße und Feuchtigkeit auf das LIBS-Signal untersucht. Die unterschiedlichen Korngr{\"o}ßen haben nur einen geringen Einfluss auf das LIBS-Signal und das Kalibriermodell l{\"a}sst sich durch entsprechende Proben leicht anpassen. Dagegen ist der Einfluss der Feuchtigkeit deutlich st{\"a}rker und h{\"a}ngt stark von der Bodenart ab, sodass f{\"u}r jede Bodenart ein separates Kalibriermodell f{\"u}r verschiedene Feuchtigkeitsgehalte erstellt werden muss. Mithilfe der PCA kann der Feuchtigkeitsgehalt im Boden grob abgesch{\"a}tzt werden und die entsprechende Kalibrierung ausgew{\"a}hlt werden. Diese Arbeit liefert essentielle Informationen f{\"u}r eine Echtzeit-Analyse von N{\"a}hrelementen auf dem Acker mittels LIBS und leistet einen wichtigen Beitrag zu einer fortschrittlichen und zukunftsf{\"a}higen Nutzung von Ackerfl{\"a}chen.}, language = {de} } @phdthesis{Phung2020, author = {Phung, Thi Thuy Nga}, title = {Defect chemistry in halide perovskites}, doi = {10.25932/publishup-47652}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-476529}, school = {Universit{\"a}t Potsdam}, pages = {vi, 231}, year = {2020}, abstract = {Metallhalogenid-Perowskite haben sich aufgrund ihrer hervorragenden optoelektronischen Eigenschaften zu einer attraktiven Materialklasse f{\"u}r die Photovoltaikindustrie entwickelt. Die Langzeitstabilit{\"a}t ist jedoch noch immer ein Hindernis f{\"u}r die industrielle Realisierung dieser Materialklasse. Zunehmend zeigen sich Hinweise daf{\"u}r, dass intrinsische Defekte im Perowskit die Material-Degradation f{\"o}rdern. Das Verst{\"a}ndnis der Defekte im Perowskit ist wichtig, um seine Stabilit{\"a}t und optoelektronische Qualit{\"a}t weiter zu verbessern. Diese Dissertation konzentriert sich daher auf das Thema Defektchemie im Perowskit. Der erste Teil der Dissertation gibt einen kurzen {\"U}berblick {\"u}ber die Defekteigenschaften von Halogenid-Perowskiten. Anschließend zeigt der zweite Teil, dass das Dotieren von Methylammoniumbleiiodid mit einer kleinen Menge von Erdalkalimetallen (Sr und Mg) ein h{\"o}herwertiges, weniger fehlerhaftes Material erzeugt, was zu hohen Leerlaufspannungen sowohl in der n-i-p als auch in der p-i-n Architektur von Solarzellen f{\"u}hrt. Es wurde beobachtet, dass die Dotierung in zwei Dom{\"a}nen stattfindet: eine niedrige Dotierungskonzentration f{\"u}hrt zum Einschluss der entsprechenden Elemente in das Kristallgitter erm{\"o}glicht, w{\"a}hrend eine hohe Dotierungskonzentration zu einer Phasentrennung f{\"u}hrt. Das Material kann im Niedrigdotierungsbereich mehr n-dotiert sein, w{\"a}hrend es im Hochdotierungsbereich weniger n-dotiert ist. Die Schwelle dieser beiden Regime h{\"a}ngt von der Atomgr{\"o}ße der Dotierelemente ab. Der n{\"a}chste Teil der Dissertation untersucht die photoinduzierte Degradation von Methylammonium-Bleiiodid. Dieser Abbaumechanismus h{\"a}ngt eng mit der Bildung und Migration von defekten zusammen. Nach der Bildung k{\"o}nnen sich diese in Abh{\"a}ngigkeit von der Defektdichte und ihrer Verteilung bewegen. Demnach kann eine hohe Defektdichte wie an den Korngrenzen eines Perowskitfilms die Beweglichkeit von ionischen Punktdefekten hemmen. Diese Erkenntnis ließe sich auf das zuk{\"u}nftige Materialdesign in der Photovoltaikindustrie anwenden, da die Perowskit-Solarzellen normalerweise einen polykristallinen D{\"u}nnfilm mit hoher Korngrenzendichte verwenden. Die abschließende Studie, die in dieser Dissertation vorgestellt wird, konzentriert sich auf die Stabilit{\"a}t der neuesten „dreifach-kationen" Perowskit-basierten Solarzellen unter dem Einfluss einer permanent angelegten elektrischen Spannung. Eine l{\"a}ngere Betriebsdauer (mehr als drei Stunden permanente Spannung) f{\"o}rdert die Amorphisierung im Halogenid-Perowskiten. Es wird hierbei vermutet, dass sich eine amorphe Phase an den Grenzfl{\"a}chen bildet, insbesondere zwischen der lochselektiven Schicht und dem Perowskit. Diese amorphe Phase hemmt den Ladungstransport und beeintr{\"a}chtigt die Leistung der Perowskit-Solarzelle erheblich. Sobald jedoch keine Spannung mehr anliegt k{\"o}nnen sich die Perowskitschichten im Dunkeln bereits nach einer kurzen Pause regenerieren. Die Amorphisierung wird auf die Migration von ionischen Fehlordnungen zur{\"u}ckgef{\"u}hrt, h{\"o}chstwahrscheinlich auf die Migration von Halogeniden. Dieser Ansatz zeigt ein neues Verst{\"a}ndnis des Abbau-Mechanismus in Perowskit-Solarzellen unter Betriebsbedingungen.}, language = {en} } @phdthesis{LopezdeGuerenu2020, author = {L{\´o}pez de Guere{\~n}u, Anna}, title = {Tm3+-doped NaYF4 nanoparticles}, doi = {10.25932/publishup-47559}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-475593}, school = {Universit{\"a}t Potsdam}, pages = {119}, year = {2020}, abstract = {Lately, the integration of upconverting nanoparticles (UCNP) in industrial, biomedical and scientific applications has been increasingly accelerating, owing to the exceptional photophysical properties that UCNP offer. Some of the most promising applications lie in the field of medicine and bioimaging due to such advantages as, among others, deeper tissue penetration, reduced optical background, possibility for multicolor imaging, and lower toxicity, compared to many known luminophores. However, some questions regarding not only the fundamental photophysical processes, but also the interaction of the UCNP with other luminescent reporters frequently used for bioimaging and the interaction with biological media remain unanswered. These issues were the primary motivation for the presented work. This PhD thesis investigated several aspects of various properties and possibilities for bioapplications of Yb3+,Tm3+-doped NaYF4 upconverting nanoparticles. First, the effect of Gd3+ doping on the structure and upconverting behaviour of the nanocrystals was assessed. The ageing process of the UCNP in cyclohexane was studied over 24 months on the samples with different Gd3+ doping concentrations. Structural information was gathered by means of X-ray diffraction (XRD), transmission electron microscopy (TEM), dynamic light scattering (DLS), and discussed in relation to spectroscopic results, obtained through multiparameter upconversion luminescence studies at various temperatures (from 4 K to 295 K). Time-resolved and steady-state emission spectra recorded over this ample temperature range allowed for a deeper understanding of photophysical processes and their dependence on structural changes of UCNP. A new protocol using a commercially available high boiling solvent allowed for faster and more controlled production of very small and homogeneous UCNP with better photophysical properties, and the advantages of a passivating NaYF4 shell were shown. F{\"o}rster resonance energy transfer (FRET) between four different species of NaYF4: Yb3+, Tm3+ UCNP (synthesized using the improved protocol) and a small organic dye was studied. The influence of UCNP composition and the proximity of Tm3+ ions (donors in the process of FRET) to acceptor dye molecules have been assessed. The brightest upconversion luminescence was observed in the UCNP with a protective inert shell. UCNP with Tm3+ ions only in the shell were the least bright, but showed the most efficient energy transfer. In the final part, two surface modification strategies were applied to make UCNP soluble in water, which simultaneously allowed for linking them via a non-toxic copper-free click reaction to the liposomes, which served as models for further cell experiments. The results were assessed on a confocal microscope system, which was made possible by lesser known downshifting properties of Yb3+, Tm3+-doped UCNP. Preliminary antibody-staining tests using two primary and one dye-labelled secondary antibodies were performed on MDCK-II cells.}, language = {en} } @phdthesis{Kaergell2020, author = {K{\"a}rgell, Martin}, title = {Layer formation from perovskite nanoparticles with tunable optical and electronic properties}, doi = {10.25932/publishup-47566}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-475667}, school = {Universit{\"a}t Potsdam}, pages = {ix, 233}, year = {2020}, abstract = {Hybrid organic-inorganic perovskites have attracted attention in recent years, caused by the incomparable increase in efficiency in energy convergence, which implies the application as an absorber material for solar cells. A disadvantage of these materials is, among others, the instability to moisture and UV-radiation. One possible solution for these problems is the reduction of the size towards the nano world. With that nanosized perovskites are showing superior stability in comparison to e.g. perovskite layers. Additionally to this the nanosize even enables stable perovskite structures, which could not be achieved otherwise at room temperature. This thesis is separated into two major parts. The separation is done by the composition and the band gap of the material and at the same time the shape and size of the nanoparticles. Here the division is made by the methylammonium lead tribromide nanoplatelets and the caesium lead triiodide nanocubes. The first part is focusing on the hybrid organic-inorganic perovskite (methylammonium lead tribromide) nanoplatelets with a band gap of 2.35 eV and their thermal behaviour. Due to the challenging character of this material, several analysis methods are used to investigate the sub nano and nanostructures under the influence of temperature. As a result, a shift of phase-transition temperatures towards higher temperatures is observed. This unusual behaviour can be explained by the ligand, which is incorporated in the perovskite outer structure and adds phase-stability into the system. The second part of this thesis is focusing on the inorganic caesium lead triiodide nanocubes with a band gap of 1.83 eV. These nanocrystals are first investigated and compared by TEM, XRD and other optical methods. Within these methods, a cuboid and orthorhombic structure are revealed instead of the in literature described cubic shape and structure. Furthermore, these cuboids are investigated towards their self-assembly on a substrate. Here a high degree in self-assembly is shown. As a next step, the ligands of the nanocuboids are exchanged against other ligands to increase the charge carrier mobility. This is further investigated by the above-mentioned methods. The last section is dealing with the enhancement of the CsPbI3 structure, by incorporating potassium in the crystal structure. The results are suggesting here an increase in stability.}, language = {en} } @phdthesis{Knauf2020, author = {Knauf, Jan}, title = {Synthesis of highly fluorinated precursors and their deposition conditions for self-assembled monolayers with defined small-scale surface structures as templates for the manipulation of wetting behavior}, doi = {10.25932/publishup-47380}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-473804}, school = {Universit{\"a}t Potsdam}, pages = {X, 204}, year = {2020}, abstract = {"How Wenzel and Cassie were wrong" - this was the eye-catching title of an article published by Lichao Gao and Thomas McCarthy in 2007, in which fundamental interpretations of wetting behavior were put into question. The authors initiated a discussion on a subject, which had been generally accepted a long time ago and they showed that wetting phenomena were not as fully understood as imagined. Similarly, this thesis tries to put a focus on certain aspects of liquid wetting, which so far have been widely neglected in terms of interpretation and experimental proof. While the effect of surface roughness on the macroscopically observed wetting behavior is commonly and reliably interpreted according to the well-known models of Wenzel and Cassie/Baxter, the size-scale of the structures responsible for the surface's rough texture has not been of further interest. Analogously, the limits of these models have not been described and exploited. Thus, the question arises, what will happen when the size of surface structures is reduced to the size of the contacting liquid molecules itself? Are common methods still valid or can deviations from macroscopic behavior be observed? This thesis wants to create a starting point regarding these questions. In order to investigate the effect of smallest-scale surface structures on liquid wetting, a suitable model system is developed by means of self-assembled monolayer (SAM) formation from (fluoro)organic thiols of differing lengths of the alkyl chain. Surface topographies are created which rely on size differences of several {\AA}ngstr{\"o}ms and exhibit surprising wetting behavior depending on the choice of the individual precursor system. Thus, contact angles are experimentally detected, which deviate considerably from theoretical calculations based on Wenzel and Cassie/Baxter models and confirm that sub-nm surface topographies affect wetting. Moreover, experimentally determined wetting properties are found to correlate well to an assumed scale-dependent surface tension of the contacting liquid. This behavior has already been described for scattering experiments taking into account capillary waves on the liquid surface induced by temperature and had been predicted earlier by theoretical calculations. However, the investigation of model surfaces requires the provision of suitable precursor molecules, which are not commercially available and opens up a door to the exotic chemistry of fluoro-organic materials. During the course of this work, the synthesis of long-chain precursors is examined with a particular focus put on oligomerically pure semi-fluorinated n-alkyl thiols and n-alkyl trichlorosilanes. For this, general protocols for the syntheses of the desired compounds are developed and product mixtures are assayed to be separated into fractions of individual chain lengths by fluorous-phase high-performance liquid chromatography (F-HPLC). The transition from model systems to technically more relevant surfaces and applications is initiated through the deposition of SAMs from long-chain fluorinated n-alkyl trichlorosilanes. Depositions are accomplished by a vapor-phase deposition process conducted on a pilot-scale set-up, which enables the exact control of relevant process parameters. Thus, the influence of varying deposition conditions on the properties of the final coating is examined and analyzed for the most important parameters. The strongest effect is observed for the partial pressure of reactive water vapor, which directly controls the extent of precursor hydrolysis during the deposition process. Experimental results propose that the formation of ordered monolayers rely on the amount of hydrolyzed silanol species present in the deposition system irrespective of the exact grade of hydrolysis. However, at increased amounts of species which are able to form cross-linked molecules due to condensation reactions, films deteriorate in quality. This effect is assumed to be caused by the introduction of defects within the film and the adsorption of cross linked agglomerates. Deposition conditions are also investigated for chain extended precursor species and reveal distinct differences caused by chain elongation.}, language = {en} } @phdthesis{Erler2020, author = {Erler, Alexander}, title = {Entwicklung von online-Detektionsverfahren f{\"u}r landwirtschaftlich relevante Analyten}, doi = {10.25932/publishup-47340}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-473406}, school = {Universit{\"a}t Potsdam}, pages = {viii, 123}, year = {2020}, abstract = {Die Entwicklung nachhaltiger Bewirtschaftungs- und Produktionsmethoden ist eine der zentralen Fragestellungen der modernen Agrarwirtschaft. Die vorliegende Arbeit besch{\"a}ftigt sich mit zwei Forschungsthemen, die das Konzept Nachhaltigkeit beinhalten. In beiden F{\"a}llen werden analytische Grundlagen f{\"u}r die Entwicklung entsprechender landwirtschaftlicher Arbeitsmethoden gelegt. Das erste Thema ist an den sogenannten Pr{\"a}zisionsackerbau angelehnt. Bei diesem wird die Bearbeitung von Agrarfl{\"a}chen ortsabh{\"a}ngig ausgef{\"u}hrt. Das heißt, die Ausbringung von Saatgut, D{\"u}nger, Bew{\"a}sserung usw. richtet sich nach den Eigenschaften des jeweiligen Standortes und wird nicht pauschal gleichm{\"a}ßig {\"u}ber ein ganzes Feld verteilt. Voraussetzung hierf{\"u}r ist eine genaue Kenntnis der Bodeneigenschaften. In der vorliegenden Arbeit sollten diese Parameter mittels der analytischen Technik der Laser-induzierten Breakdown Spektroskopie (LIBS), die eine Form der Elementaranalyse darstellt, bestimmt werden. Bei den hier gesuchten Bodeneigenschaften handelte es sich um die Gehalte von N{\"a}hrstoffen sowie einige sekund{\"a}re Parameter wie den Humusanteil, den pH-Wert und den pflanzenverf{\"u}gbaren Anteil einzelner N{\"a}hrstoffe. Diese Eigenschaften wurden durch etablierte Referenzanalysen bestimmt. Darauf aufbauend wurden die Messergebnissen der LIBS-Untersuchungen durch verschiedene Methoden der sogenannten multivariaten Datenanalyse (MVA) ausgewertet. Daraus sollten Modelle zur Vorhersage der Bodenparameter in zuk{\"u}nftigen LIBS-Messungen erarbeitet werden. Die Ergebnisse dieser Arbeit zeigten, dass mit der Kombination von LIBS und MVA s{\"a}mtliche Bodenparameter erfolgreich vorhergesagt werden konnten. Dies beinhaltete sowohl die tats{\"a}chlich messbaren Elemente als auch die sekund{\"a}ren Eigenschaften, welche durch die MVA mit den Elementgehalten in Zusammenhang gebracht wurden. Das zweite Thema besch{\"a}ftigt sich mit der Vermeidung von Verlusten durch Sch{\"a}dlingsbefall bei der Getreidelagerung. Hier sollten mittels der Ionenmobilit{\"a}tsspektrometrie (IMS) Schimmelpilzkontaminationen detektiert werden. Dabei wurde nach den fl{\"u}chtigen Stoffwechselprodukten der Pilze gesucht. Die durch Referenzmessungen mit Massenspektrometern identifizierten Substanzen konnten durch IMS im Gasvolumen {\"u}ber den Proben, dem sogenannten Headspace, nachgewiesen werden. Dabei wurde nicht nur die Anwesenheit einer Kontamination festgestellt, sondern diese auch charakterisiert. Die freigesetzten Substanzen bildeten spezifische Muster, anhand derer die Pilze identifiziert werden konnten. Hier wurden sowohl verschiedene Gattungen als auch einzelne Arten unterschieden. Die Messungen fanden auf verschiedenen N{\"a}hrb{\"o}den statt um den Einfluss dieser auf die Stoffwechselprodukte zu beobachten. Auch die sekund{\"a}ren Stoffwechselprodukte der Schimmelpilze, die Mykotoxine, konnten durch IMS detektiert werden. Beide in dieser Arbeit vorgestellten Forschungsthemen konnten erfolgreich abgeschlossen werden. Sowohl LIBS als auch IMS erwiesen sich f{\"u}r den Nachweis der jeweiligen Analyten als geeignet, und der Einsatz moderner computergest{\"u}tzter Auswertemethoden erm{\"o}glichte die genaue Charakterisierung der gesuchten Parameter. Beide Techniken k{\"o}nnen in Form von mobilen Ger{\"a}ten verwendet werden und zeichnen sich durch eine schnelle und sichere Analyse aus. In Kombination mit entsprechenden Modellen der MVA sind damit alle Voraussetzungen f{\"u}r Vor-Ort-Untersuchungen und damit f{\"u}r den Einsatz in der Landwirtschaft erf{\"u}llt.}, language = {de} } @phdthesis{Melani2019, author = {Melani, Giacomo}, title = {From structural fluctuations to vibrational spectroscopy of adsorbates on surfaces}, doi = {10.25932/publishup-44182}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-441826}, school = {Universit{\"a}t Potsdam}, pages = {119}, year = {2019}, abstract = {Aluminum oxide is an Earth-abundant geological material, and its interaction with water is of crucial importance for geochemical and environmental processes. Some aluminum oxide surfaces are also known to be useful in heterogeneous catalysis, while the surface chemistry of aqueous oxide interfaces determines the corrosion, growth and dissolution of such materials. In this doctoral work, we looked mainly at the (0001) surface of α-Al 2 O 3 and its reactivity towards water. In particular, a great focus of this work is dedicated to simulate and address the vibrational spectra of water adsorbed on the α-alumina(0001) surface in various conditions and at different coverages. In fact, the main source of comparison and inspiration for this work comes from the collaboration with the "Interfacial Molecular Spectroscopy" group led by Dr. R. Kramer Campen at the Fritz-Haber Institute of the MPG in Berlin. The expertise of our project partners in surface-sensitive Vibrational Sum Frequency (VSF) generation spectroscopy was crucial to develop and adapt specific simulation schemes used in this work. Methodologically, the main approach employed in this thesis is Ab Initio Molecular Dynamics (AIMD) based on periodic Density Functional Theory (DFT) using the PBE functional with D2 dispersion correction. The analysis of vibrational frequencies from both a static and a dynamic, finite-temperature perspective offers the ability to investigate the water / aluminum oxide interface in close connection to experiment. The first project presented in this work considers the characterization of dissociatively adsorbed deuterated water on the Al-terminated (0001) surface. This particular structure is known from both experiment and theory to be the thermodynamically most stable surface termination of α-alumina in Ultra-High Vacuum (UHV) conditions. Based on experiments performed by our colleagues at FHI, different adsorption sites and products have been proposed and identified for D 2 O. While previous theoretical investigations only looked at vibrational frequencies of dissociated OD groups by staticNormal Modes Analysis (NMA), we rather employed a more sophisticated approach to directly assess vibrational spectra (like IR and VSF) at finite temperature from AIMD. In this work, we have employed a recent implementation which makes use of velocity-velocity autocorrelation functions to simulate such spectral responses of O-H(D) bonds. This approach allows for an efficient and qualitatively accurate estimation of Vibrational Densities of States (VDOS) as well as IR and VSF spectra, which are then tested against experimental spectra from our collaborators. In order to extend previous work on unimolecularly dissociated water on α-Al 2 O 3 , we then considered a different system, namely, a fully hydroxylated (0001) surface, which results from the reconstruction of the UHV-stable Al-terminated surface at high water contents. This model is then further extended by considering a hydroxylated surface with additional water molecules, forming a two-dimensional layer which serves as a potential template to simulate an aqueous interface in environmental conditions. Again, employing finite-temperature AIMD trajectories at the PBE+D2 level, we investigated the behaviour of both hydroxylated surface (HS) and the water-covered structure derived from it (known as HS+2ML). A full range of spectra, from VDOS to IR and VSF, is then calculated using the same methodology, as described above. This is the main focus of the second project, reported in Chapter 5. In this case, comparison between theoretical spectra and experimental data is definitely good. In particular, we underline the nature of high-frequency resonances observed above 3700 cm -1 in VSF experiments to be associated with surface OH-groups, known as "aluminols" which are a key fingerprint of the fully hydroxylated surface. In the third and last project, which is presented in Chapter 6, the extension of VSF spectroscopy experiments to the time-resolved regime offered us the opportunity to investigate vibrational energy relaxation at the α-alumina / water interface. Specifically, using again DFT-based AIMD simulations, we simulated vibrational lifetimes for surface aluminols as experimentally detected via pump-probe VSF. We considered the water-covered HS model as a potential candidate to address this problem. The vibrational (IR) excitation and subsequent relaxation is performed by means of a non-equilibrium molecular dynamics scheme. In such a scheme, we specifically looked at the O-H stretching mode of surface aluminols. Afterwards, the analysis of non-equilibrium trajectories allows for an estimation of relaxation times in the order of 2-4 ps which are in overall agreement with measured ones. The aim of this work has been to provide, within a consistent theoretical framework, a better understanding of vibrational spectroscopy and dynamics for water on the α-alumina(0001) surface,ranging from very low water coverage (similar to the UHV case) up to medium-high coverages, resembling the hydroxylated oxide in environmental moist conditions.}, language = {en} } @phdthesis{Vranic2019, author = {Vranic, Marija}, title = {3D Structure of the biomarker hepcidin-25 in its native state}, doi = {10.25932/publishup-45929}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-459295}, school = {Universit{\"a}t Potsdam}, pages = {xii, 135}, year = {2019}, abstract = {Hepcidin-25 (Hep-25) plays a crucial role in the control of iron homeostasis. Since the dysfunction of the hepcidin pathway leads to multiple diseases as a result of iron imbalance, hepcidin represents a potential target for the diagnosis and treatment of disorders of iron metabolism. Despite intense research in the last decade targeted at developing a selective immunoassay for iron disorder diagnosis and treatment and better understanding the ferroportin-hepcidin interaction, questions remain. The key to resolving these underlying questions is acquiring exact knowledge of the 3D structure of native Hep-25. Since it was determined that the N-terminus, which is responsible for the bioactivity of Hep-25, contains a small Cu(II)-binding site known as the ATCUN motif, it was assumed that the Hep-25-Cu(II) complex is the native, bioactive form of the hepcidin. This structure has thus far not been elucidated in detail. Owing to the lack of structural information on metal-bound Hep-25, little is known about its possible biological role in iron metabolism. Therefore, this work is focused on structurally characterizing the metal-bound Hep-25 by NMR spectroscopy and molecular dynamics simulations. For the present work, a protocol was developed to prepare and purify properly folded Hep-25 in high quantities. In order to overcome the low solubility of Hep-25 at neutral pH, we introduced the C-terminal DEDEDE solubility tag. The metal binding was investigated through a series of NMR spectroscopic experiments to identify the most affected amino acids that mediate metal coordination. Based on the obtained NMR data, a structural calculation was performed in order to generate a model structure of the Hep-25-Ni(II) complex. The DEDEDE tag was excluded from the structural calculation due to a lack of NMR restraints. The dynamic nature and fast exchange of some of the amide protons with solvent reduced the overall number of NMR restraints needed for a high-quality structure. The NMR data revealed that the 20 Cterminal Hep-25 amino acids experienced no significant conformational changes, compared to published results, as a result of a pH change from pH 3 to pH 7 and metal binding. A 3D model of the Hep-25-Ni(II) complex was constructed from NMR data recorded for the hexapeptideNi(II) complex and Hep-25-DEDEDE-Ni(II) complex in combination with the fixed conformation of 19 C-terminal amino acids. The NMR data of the Hep-25-DEDEDE-Ni(II) complex indicates that the ATCUN motif moves independently from the rest of the structure. The 3D model structure of the metal-bound Hep-25 allows for future works to elucidate hepcidin's interaction with its receptor ferroportin and should serve as a starting point for the development of antibodies with improved selectivity.}, language = {en} } @phdthesis{Rietze2020, author = {Rietze, Clemens}, title = {Optimierung und Analyse von molekularen Schaltern in komplexen Umgebungen: thermische Stabilit{\"a}t, Auslesbarkeit und Schaltbarkeit}, doi = {10.25932/publishup-45959}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-459594}, school = {Universit{\"a}t Potsdam}, pages = {131}, year = {2020}, abstract = {Seit Jahrzehnten stellen die molekularen Schalter ein wachsendes Forschungsgebiet dar. Im Rahmen dieser Dissertation stand die Verbesserung der thermischen Stabilit{\"a}t, der Auslesbarkeit und Schaltbarkeit dieser molekularen Schalter in komplexen Umgebungen mithilfe computergest{\"u}tzter Chemie im Vordergrund. Im ersten Projekt wurde die Kinetik der thermischen E → Z-Isomerisierung und die damit verbundene thermische Stabilit{\"a}t eines Azobenzol-Derivats untersucht. Daf{\"u}r wurde Dichtefunktionaltheorie (DFT) in Verbindung mit der Eyring-Theorie des {\"U}bergangszustandes (TST) angewendet. Das Azobenzol-Derivat diente als vereinfachtes Modell f{\"u}r das Schalten in einer komplexen Umgebung (hier in metallorganischen Ger{\"u}sten). Es wurden thermodynamische und kinetische Gr{\"o}ßen unter verschiedenen Einfl{\"u}ssen berechnet, wobei gute {\"U}bereinstimmungen mit dem Experiment gefunden wurden. Die hier verwendete Methode stellte einen geeigneten Ansatz dar, um diese Gr{\"o}ßen mit angemessener Genauigkeit vorherzusagen. Im zweiten Projekt wurde die Auslesbarkeit der Schaltzust{\"a}nde in Form des nichtlinearen optischen (NLO) Kontrastes f{\"u}r die Molek{\"u}lklasse der Fulgimide untersucht. Die daf{\"u}r ben{\"o}tigten dynamischen Hyperpolarisierbarkeiten unter Ber{\"u}cksichtigung der Elektronenkorrelation wurden mittels einer etablierten Skalierungsmethode berechnet. Es wurden verschiedene Fulgimide analysiert, wobei viele experimentelle Befunde best{\"a}tigt werden konnten. Dar{\"u}ber hinaus legte die theoretische Vorhersage f{\"u}r ein weiteres System nahe, dass insbesondere die Erweiterung des π-Elektronensystems ein vielversprechender Ansatz zur Verbesserung von NLO-Kontrasten darstellt. Die Fulgimide verf{\"u}gen somit {\"u}ber n{\"u}tzliche Eigenschaften, sodass diese in Zukunft als Bauelemente in photonischen und optoelektronischen Bereichen Anwendungen finden k{\"o}nnten. Im dritten Projekt wurde die E → Z-Isomerisierung auf ein quantenmechanisch (QM) behandeltes Dimer mit molekularmechanischer (MM) Umgebung und zwei Fluorazobenzol-Monomeren durch Molek{\"u}ldynamik simuliert. Dadurch wurde die Schaltbarkeit in komplexer Umgebung (hier selbstorgansierte Einzelschichten = SAMs) bzw. von Azobenzolderivaten analysiert. Mit dem QM/MM Modell wurden sowohl Van-der-Waals-Interaktionen mit der Umgebung als auch elektronische Kopplung (nur zwischen QM-Molek{\"u}len) ber{\"u}cksichtigt. Dabei wurden systematische Untersuchungen zur Packungsdichte durchgef{\"u}hrt. Es zeigte sich, dass bereits bei einem Molek{\"u}labstand von 4.5 {\AA} die Quantenausbeute (prozentuale Anzahl erfolgreicher Schaltprozesse) des Monomers erreicht wird. Die gr{\"o}ßten Quantenausbeuten wurden f{\"u}r die beiden untersuchten Fluorazobenzole erzielt. Es wurden die Effekte des Molek{\"u}labstandes und der Einfluss von Fluorsubstituenten auf die Dynamik eingehend untersucht, sodass der Weg f{\"u}r darauf aufbauende Studien geebnet ist.}, language = {de} } @misc{Linker2020, author = {Linker, Torsten}, title = {Addition of Heteroatom Radicals to endo-Glycals}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {873}, issn = {1866-8372}, doi = {10.25932/publishup-45997}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-459970}, pages = {15}, year = {2020}, abstract = {Radical reactions have found many applications in carbohydrate chemistry, especially in the construction of carbon-carbon bonds. The formation of carbon-heteroatom bonds has been less intensively studied. This mini-review will summarize the efforts to add heteroatom radicals to unsaturated carbohydrates like endo-glycals. Starting from early examples, developed more than 50 years ago, the importance of such reactions for carbohydrate chemistry and recent applications will be discussed. After a short introduction, the mini-review is divided in sub-chapters according to the heteroatoms halogen, nitrogen, phosphorus, and sulfur. The mechanisms of radical generation by chemical or photochemical processes and the subsequent reactions of the radicals at the 1-position will be discussed. This mini-review cannot cover all aspects of heteroatom-centered radicals in carbohydrate chemistry, but should provide an overview of the various strategies and future perspectives}, language = {en} } @phdthesis{Latza2020, author = {Latza, Victoria Maria}, title = {Interactions involving lipid-based surfaces}, doi = {10.25932/publishup-44559}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-445593}, school = {Universit{\"a}t Potsdam}, pages = {217}, year = {2020}, abstract = {Interactions involving biological interfaces such as lipid-based membranes are of paramount importance for all life processes. The same also applies to artificial interfaces to which biological matter is exposed, for example the surfaces of drug delivery systems or implants. This thesis deals with the two main types of interface interactions, namely (i) interactions between a single interface and the molecular components of the surrounding aqueous medium and (ii) interactions between two interfaces. Each type is investigated with regard to an important scientific problem in the fields of biotechnology and biology: 1.) The adsorption of proteins to surfaces functionalized with hydrophilic polymer brushes; a process of great biomedical relevance in context with harmful foreign-body-response to implants and drug delivery systems. 2.) The influence of glycolipids on the interaction between lipid membranes; a hitherto largely unexplored phenomenon with potentially great biological relevance. Both problems are addressed with the help of (quasi-)planar, lipid-based model surfaces in combination with x-ray and neutron scattering techniques which yield detailed structural insights into the interaction processes. Regarding the adsorption of proteins to brush-functionalized surfaces, the first scenario considered is the exposure of the surfaces to human blood serum containing a multitude of protein species. Significant blood protein adsorption was observed despite the functionalization, which is commonly believed to act as a protein repellent. The adsorption consists of two distinct modes, namely strong adsorption to the brush grafting surface and weak adsorption to the brush itself. The second aspect investigated was the fate of the brush-functionalized surfaces when exposed to aqueous media containing immune proteins (antibodies) against the brush polymer, an emerging problem in current biomedical applications. To this end, it was found that antibody binding cannot be prevented by variation of the brush grafting density or the polymer length. This result motivates the search for alternative, strictly non-antigenic brush chemistries. With respect to the influence of glycolipids on the interaction between lipid membranes, this thesis focused on the glycolipids' ability to crosslink and thereby to tightly attract adjacent membranes. This adherence is due to preferential saccharide-saccharide interactions occurring among the glycolipid headgroups. This phenomenon had previously been described for lipids with special oligo-saccharide motifs. Here, it was investigated how common this phenomenon is among glycolipids with a variety of more abundant saccharide-headgroups. It was found that glycolipid-induced membrane crosslinking is equally observed for some of these abundant glycolipid types, strongly suggesting that this under-explored phenomenon is potentially of great biological relevance.}, language = {en} } @misc{ErlerRiebeBeitzetal.2019, author = {Erler, Alexander and Riebe, Daniel and Beitz, Toralf and L{\"o}hmannsr{\"o}ben, Hans-Gerd and Gebbers, Robin}, title = {Soil Nutrient Detection for Precision Agriculture Using Handheld Laser-Induced Breakdown Spectroscopy (LIBS) and Multivariate Regression Methods (PLSR, Lasso and GPR)}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {815}, issn = {1866-8372}, doi = {10.25932/publishup-44418}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-444183}, pages = {19}, year = {2019}, abstract = {Precision agriculture (PA) strongly relies on spatially differentiated sensor information. Handheld instruments based on laser-induced breakdown spectroscopy (LIBS) are a promising sensor technique for the in-field determination of various soil parameters. In this work, the potential of handheld LIBS for the determination of the total mass fractions of the major nutrients Ca, K, Mg, N, P and the trace nutrients Mn, Fe was evaluated. Additionally, other soil parameters, such as humus content, soil pH value and plant available P content, were determined. Since the quantification of nutrients by LIBS depends strongly on the soil matrix, various multivariate regression methods were used for calibration and prediction. These include partial least squares regression (PLSR), least absolute shrinkage and selection operator regression (Lasso), and Gaussian process regression (GPR). The best prediction results were obtained for Ca, K, Mg and Fe. The coefficients of determination obtained for other nutrients were smaller. This is due to much lower concentrations in the case of Mn, while the low number of lines and very weak intensities are the reason for the deviation of N and P. Soil parameters that are not directly related to one element, such as pH, could also be predicted. Lasso and GPR yielded slightly better results than PLSR. Additionally, several methods of data pretreatment were investigated.}, language = {en} } @misc{EbelBald2020, author = {Ebel, Kenny and Bald, Ilko}, title = {Length and Energy Dependence of Low-Energy Electron-Induced Strand Breaks in Poly(A) DNA}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {814}, issn = {1866-8372}, doi = {10.25932/publishup-44412}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-444125}, pages = {13}, year = {2020}, abstract = {The DNA in living cells can be effectively damaged by high-energy radiation, which can lead to cell death. Through the ionization of water molecules, highly reactive secondary species such as low-energy electrons (LEEs) with the most probable energy around 10 eV are generated, which are able to induce DNA strand breaks via dissociative electron attachment. Absolute DNA strand break cross sections of specific DNA sequences can be efficiently determined using DNA origami nanostructures as platforms exposing the target sequences towards LEEs. In this paper, we systematically study the effect of the oligonucleotide length on the strand break cross section at various irradiation energies. The present work focuses on poly-adenine sequences (d(A₄), d(A₈), d(A₁₂), d(A₁₆), and d(A₂₀)) irradiated with 5.0, 7.0, 8.4, and 10 eV electrons. Independent of the DNA length, the strand break cross section shows a maximum around 7.0 eV electron energy for all investigated oligonucleotides confirming that strand breakage occurs through the initial formation of negative ion resonances. When going from d(A₄) to d(A₁₆), the strand break cross section increases with oligonucleotide length, but only at 7.0 and 8.4 eV, i.e., close to the maximum of the negative ion resonance, the increase in the strand break cross section with the length is similar to the increase of an estimated geometrical cross section. For d(A₂₀), a markedly lower DNA strand break cross section is observed for all electron energies, which is tentatively ascribed to a conformational change of the dA₂₀ sequence. The results indicate that, although there is a general length dependence of strand break cross sections, individual nucleotides do not contribute independently of the absolute strand break cross section of the whole DNA strand. The absolute quantification of sequence specific strand breaks will help develop a more accurate molecular level understanding of radiation induced DNA damage, which can then be used for optimized risk estimates in cancer radiation therapy.}, language = {en} }