@phdthesis{Schwetlick2023,
  author    = {Schwetlick, Lisa},
  title     = {Data assimilation for neurocognitive models of eye movement},
  doi       = {10.25932/publishup-59828},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-598280},
  school      = {Universit{\"a}t Potsdam},
  pages     = {x, 209},
  year      = {2023},
  abstract  = {Visual perception is a complex and dynamic process that plays a crucial role in how we perceive and interact with the world. The eyes move in a sequence of saccades and fixations, actively modulating perception by moving different parts of the visual world into focus. Eye movement behavior can therefore offer rich insights into the underlying cognitive mechanisms and decision processes. Computational models in combination with a rigorous statistical framework are critical for advancing our understanding in this field, facilitating the testing of theory-driven predictions and accounting for observed data. In this thesis, I investigate eye movement behavior through the development of two mechanistic, generative, and theory-driven models. The first model is based on experimental research regarding the distribution of attention, particularly around the time of a saccade, and explains statistical characteristics of scan paths. The second model implements a self-avoiding random walk within a confining potential to represent the microscopic fixational drift, which is present even while the eye is at rest, and investigates the relationship to microsaccades. Both models are implemented in a likelihood-based framework, which supports the use of data assimilation methods to perform Bayesian parameter inference at the level of individual participants, analyses of the marginal posteriors of the interpretable parameters, model comparisons, and posterior predictive checks. The application of these methods enables a thorough investigation of individual variability in the space of parameters. Results show that dynamical modeling and the data assimilation framework are highly suitable for eye movement research and, more generally, for cognitive modeling.},
  language  = {en}
}
@phdthesis{LopezGambino2023,
  author    = {L{\´o}pez Gambino, Maria Soledad},
  title     = {Time Buying in Task-Oriented Spoken Dialogue Systems},
  doi       = {10.25932/publishup-59280},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-592806},
  school      = {Universit{\"a}t Potsdam},
  pages     = {148},
  year      = {2023},
  abstract  = {This dissertation focuses on the handling of time in dialogue. Specifically, it investigates how humans bridge time, or "buy time", when they are expected to convey information that is not yet available to them (e.g. a travel agent searching for a flight in a long list while the customer is on the line, waiting). It also explores the feasibility of modeling such time-bridging behavior in spoken dialogue systems, and it examines how endowing such systems with more human-like time-bridging capabilities may affect humans' perception of them. The relevance of time-bridging in human-human dialogue seems to stem largely from a need to avoid lengthy pauses, as these may cause both confusion and discomfort among the participants of a conversation (Levinson, 1983; Lundholm Fors, 2015). However, this avoidance of prolonged silence is at odds with the incremental nature of speech production in dialogue (Schlangen and Skantze, 2011): Speakers often start to verbalize their contribution before it is fully formulated, and sometimes even before they possess the information they need to provide, which may result in them running out of content mid-turn. In this work, we elicit conversational data from humans, to learn how they avoid being silent while they search for information to convey to their interlocutor. We identify commonalities in the types of resources employed by different speakers, and we propose a classification scheme. We explore ways of modeling human time-buying behavior computationally, and we evaluate the effect on human listeners of embedding this behavior in a spoken dialogue system. Our results suggest that a system using conversational speech to bridge time while searching for information to convey (as humans do) can provide a better experience in several respects than one which remains silent for a long period of time. However, not all speech serves this purpose equally: Our experiments also show that a system whose time-buying behavior is more varied (i.e. which exploits several categories from the classification scheme we developed and samples them based on information from human data) can prevent overestimation of waiting time when compared, for example, with a system that repeatedly asks the interlocutor to wait (even if these requests for waiting are phrased differently each time). Finally, this research shows that it is possible to model human time-buying behavior on a relatively small corpus, and that a system using such a model can be preferred by participants over one employing a simpler strategy, such as randomly choosing utterances to produce during the wait —even when the utterances used by both strategies are the same.},
  language  = {en}
}
@phdthesis{Reich2023,
  author    = {Reich, Marvin},
  title     = {Advances in hydrogravimetry},
  doi       = {10.25932/publishup-60479},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-604794},
  school      = {Universit{\"a}t Potsdam},
  pages     = {ix, 142},
  year      = {2023},
  abstract  = {The interest of the hydrological community in the gravimetric method has steadily increased within the last decade. This is reflected by numerous studies from many different groups with a broad range of approaches and foci. Many of those are traditionally rather hydrology-oriented groups who recognized gravimetry as a potential added value for their hydrological investigations. While this resulted in a variety of interesting and useful findings, contributing to extend the respective knowledge and confirming the methodological potential, on the other hand, many interesting and unresolved questions emerged. This thesis manifests efforts, analyses and solutions carried out in this regard. Addressing and evaluating many of those unresolved questions, the research contributes to advancing hydrogravimetry, the combination of gravimetric and hydrological methods, in showing how gravimeters are a highly useful tool for applied hydrological field research. In the first part of the thesis, traditional setups of stationary terrestrial superconducting gravimeters are addressed. They are commonly installed within a dedicated building, the impermeable structure of which shields the underlying soil from natural exchange of water masses (infiltration, evapotranspiration, groundwater recharge). As gravimeters are most sensitive to mass changes directly beneath the meter, this could impede their suitability for local hydrological process investigations, especially for near-surface water storage changes (WSC). By studying temporal local hydrological dynamics at a dedicated site equipped with traditional hydrological measurement devices, both below and next to the building, the impact of these absent natural dynamics on the gravity observations were quantified. A comprehensive analysis with both a data-based and model-based approach led to the development of an alternative method for dealing with this limitation. Based on determinable parameters, this approach can be transferred to a broad range of measurement sites where gravimeters are deployed in similar structures. Furthermore, the extensive considerations on this topic enabled a more profound understanding of this so called umbrella effect. The second part of the thesis is a pilot study about the field deployment of a superconducting gravimeter. A newly developed field enclosure for this gravimeter was tested in an outdoor installation adjacent to the building used to investigate the umbrella effect. Analyzing and comparing the gravity observations from both indoor and outdoor gravimeters showed performance with respect to noise and stable environmental conditions was equivalent while the sensitivity to near-surface WSC was highly increased for the field deployed instrument. Furthermore it was demonstrated that the latter setup showed gravity changes independent of the depth where mass changes occurred, given their sufficiently wide horizontal extent. As a consequence, the field setup suits monitoring of WSC for both short and longer time periods much better. Based on a coupled data-modeling approach, its gravity time series was successfully used to infer and quantify local water budget components (evapotranspiration, lateral subsurface discharge) on the daily to annual time scale. The third part of the thesis applies data from a gravimeter field deployment for applied hydrological process investigations. To this end, again at the same site, a sprinkling experiment was conducted in a 15 x 15 m area around the gravimeter. A simple hydro-gravimetric model was developed for calculating the gravity response resulting from water redistribution in the subsurface. It was found that, from a theoretical point of view, different subsurface water distribution processes (macro pore flow, preferential flow, wetting front advancement, bypass flow and perched water table rise) lead to a characteristic shape of their resulting gravity response curve. Although by using this approach it was possible to identify a dominating subsurface water distribution process for this site, some clear limitations stood out. Despite the advantage for field installations that gravimetry is a non-invasive and integral method, the problem of non-uniqueness could only be overcome by additional measurements (soil moisture, electric resistivity tomography) within a joint evaluation. Furthermore, the simple hydrological model was efficient for theoretical considerations but lacked the capability to resolve some heterogeneous spatial structures of water distribution up to a needed scale. Nevertheless, this unique setup for plot to small scale hydrological process research underlines the high potential of gravimetery and the benefit of a field deployment. The fourth and last part is dedicated to the evaluation of potential uncertainties arising from the processing of gravity observations. The gravimeter senses all mass variations in an integral way, with the gravitational attraction being directly proportional to the magnitude of the change and inversely proportional to the square of the distance of the change. Consequently, all gravity effects (for example, tides, atmosphere, non-tidal ocean loading, polar motion, global hydrology and local hydrology) are included in an aggregated manner. To isolate the signal components of interest for a particular investigation, all non-desired effects have to be removed from the observations. This process is called reduction. The large-scale effects (tides, atmosphere, non-tidal ocean loading and global hydrology) cannot be measured directly and global model data is used to describe and quantify each effect. Within the reduction process, model errors and uncertainties propagate into the residual, the result of the reduction. The focus of this part of the thesis is quantifying the resulting, propagated uncertainty for each individual correction. Different superconducting gravimeter installations were evaluated with respect to their topography, distance to the ocean and the climate regime. Furthermore, different time periods of aggregated gravity observation data were assessed, ranging from 1 hour up to 12 months. It was found that uncertainties were highest for a frequency of 6 months and smallest for hourly frequencies. Distance to the ocean influences the uncertainty of the non-tidal ocean loading component, while geographical latitude affects uncertainties of the global hydrological component. It is important to highlight that the resulting correction-induced uncertainties in the residual have the potential to mask the signal of interest, depending on the signal magnitude and its frequency. These findings can be used to assess the value of gravity data across a range of applications and geographic settings. In an overarching synthesis all results and findings are discussed with a general focus on their added value for bringing hydrogravimetric field research to a new level. The conceptual and applied methodological benefits for hydrological studies are highlighted. Within an outlook for future setups and study designs, it was once again shown what enormous potential is offered by gravimeters as hydrological field tools.},
  language  = {en}
}
@phdthesis{Hoffmann2023,
  author    = {Hoffmann, Nicole Christiane},
  title     = {Essays on Crisis and Change From a Management-Accounting Perspective},
  doi       = {10.25932/publishup-60118},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-601185},
  school      = {Universit{\"a}t Potsdam},
  pages     = {VIII, 192},
  year      = {2023},
  abstract  = {This cumulative doctoral thesis consists of five empirical studies examining various aspects of crisis and change from a management-accounting perspective. Within the first study, a bibliometric analysis is conducted. More precisely, based on publications between the financial crisis (since 2007) and the COVID-19 crisis (starting in 2020), the crisis literature in management accounting is investigated to uncover the most influential aspects of the field and to analyze the theoretical foundations of the literature. Moreover, this investigation also serves to identify future research streams and to provide starting points for future research. Based on a survey, the second study investigates the impact of several management-accounting tools on organizational resilience and its effect on a company's competitive advantage during a crisis. The results show that their target-oriented use positively influences organizational resilience and contributes to the company's competitive advantage during the crisis. The third study provides a more detailed view on the relationship between budgeting and risk management and their benefit for companies in times of crisis. For this purpose, the relationship between the relevance of budgeting functions and risk management in the company and the corresponding impact on company performance are investigated. The results show a positive relationship. However, a crisis can also affect the relationship between the company and its shareholders: Thus, the fourth study - based on publicly available data and a survey - examines the consequences of virtual annual general meetings on shareholder rights. The results show that, temporarily, particularly the right to information was severely restricted. For the following year, this problem was fixed, and ultimately, the virtual option was introduced permanently. The crisis has thus brought about a lasting change. But not only crises cause changes: The fifth study, also based on survey data, investigates the changes in the role of management accountants caused by digitalization. More precisely, it investigates how management accountants deal with tasks that are considered outdated and unattractive. The results of the study show that different types of personalities also act differently as far as the willingness to do those unattractive tasks is concerned, and career ambitions also influence that willingness. In addition to this, the results provide insights into the motivation of management accountants to conduct tasks and thus counteract existing assumptions based on stereotypes and clich{\´e}s circulating within the research community.},
  language  = {en}
}
@article{EtteRen2023,
  author    = {Ette, Ottmar and Ren, Haiyan},
  title     = {Exploring China in Alexander von Humboldt: The Humboldt Center for Transdisciplinary Studies (HCTS), Changsha},
  series = {HiN : Alexander von Humboldt im Netz ; International Review for Humboldtian Studies},
  volume    = {XXIV},
  journal   = {HiN : Alexander von Humboldt im Netz ; International Review for Humboldtian Studies},
  number    = {46},
  editor    = {Ette, Ottmar and Knobloch, Eberhard},
  issn      = {2568-3543},
  doi       = {10.25932/publishup-59974},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-599749},
  pages     = {5 -- 11},
  year      = {2023},
  abstract  = {Humboldtian science aims at an empirically supported transdisciplinary and at the same time transareal development of a world consciousness. In the development of this world consciousness, not only Europe and the Americas, but also Central Asia and especially China play an important role. The Humboldt Center for Transdisciplinary Studies (HCTS) in Changsha, is attempting to address the fact that China has been largely left out of international Humboldt studies and that Alexander von Humboldt was intensively engaged with Central Asia and China for decades. Therefore, the Humboldt Center in Changsha sets itself the goal of expanding Humboldt Studies to include this important aspect, to stimulate and coordinate special research work, and to build scientific and cultural bridges between Germany and China, Europe and Asia.},
  language  = {en}
}
@phdthesis{LopezValencia2023,
  author    = {Lopez Valencia, Diego Andres},
  title     = {The Milnor-Moore and Poincar{\´e}-Birkhoff-Witt theorems in the locality set up and the polar structure of Shintani zeta functions},
  doi       = {10.25932/publishup-59421},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-594213},
  school      = {Universit{\"a}t Potsdam},
  pages     = {147},
  year      = {2023},
  abstract  = {This thesis bridges two areas of mathematics, algebra on the one hand with the Milnor-Moore theorem (also called Cartier-Quillen-Milnor-Moore theorem) as well as the Poincar{\´e}-Birkhoff-Witt theorem, and analysis on the other hand with Shintani zeta functions which generalise multiple zeta functions. The first part is devoted to an algebraic formulation of the locality principle in physics and generalisations of classification theorems such as Milnor-Moore and Poincar{\´e}-Birkhoff-Witt theorems to the locality framework. The locality principle roughly says that events that take place far apart in spacetime do not infuence each other. The algebraic formulation of this principle discussed here is useful when analysing singularities which arise from events located far apart in space, in order to renormalise them while keeping a memory of the fact that they do not influence each other. We start by endowing a vector space with a symmetric relation, named the locality relation, which keeps track of elements that are "locally independent". The pair of a vector space together with such relation is called a pre-locality vector space. This concept is extended to tensor products allowing only tensors made of locally independent elements. We extend this concept to the locality tensor algebra, and locality symmetric algebra of a pre-locality vector space and prove the universal properties of each of such structures. We also introduce the pre-locality Lie algebras, together with their associated locality universal enveloping algebras and prove their universal property. We later upgrade all such structures and results from the pre-locality to the locality context, requiring the locality relation to be compatible with the linear structure of the vector space. This allows us to define locality coalgebras, locality bialgebras, and locality Hopf algebras. Finally, all the previous results are used to prove the locality version of the Milnor-Moore and the Poincar{\´e}-Birkhoff-Witt theorems. It is worth noticing that the proofs presented, not only generalise the results in the usual (non-locality) setup, but also often use less tools than their counterparts in their non-locality counterparts. The second part is devoted to study the polar structure of the Shintani zeta functions. Such functions, which generalise the Riemman zeta function, multiple zeta functions, Mordell-Tornheim zeta functions, among others, are parametrised by matrices with real non-negative arguments. It is known that Shintani zeta functions extend to meromorphic functions with poles on afine hyperplanes. We refine this result in showing that the poles lie on hyperplanes parallel to the facets of certain convex polyhedra associated to the defining matrix for the Shintani zeta function. Explicitly, the latter are the Newton polytopes of the polynomials induced by the columns of the underlying matrix. We then prove that the coeficients of the equation which describes the hyperplanes in the canonical basis are either zero or one, similar to the poles arising when renormalising generic Feynman amplitudes. For that purpose, we introduce an algorithm to distribute weight over a graph such that the weight at each vertex satisfies a given lower bound.},
  language  = {en}
}
@phdthesis{Parry2023,
  author    = {Parry, Victor},
  title     = {From individual to community level: Assessing swimming movement, dispersal and fitness of zooplankton},
  doi       = {10.25932/publishup-59769},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-597697},
  school      = {Universit{\"a}t Potsdam},
  pages     = {ix, 118},
  year      = {2023},
  abstract  = {Movement is a mechanism that shapes biodiversity patterns across spatialtemporal scales. Thereby, the movement process affects species interactions, population dynamics and community composition. In this thesis, I disentangled the effects of movement on the biodiversity of zooplankton ranging from the individual to the community level. On the individual movement level, I used video-based analysis to explore the implication of movement behavior on preypredator interactions. My results showed that swimming behavior was of great importance as it determined their survival in the face of predation. The findings also additionally highlighted the relevance of the defense status/morphology of prey, as it not only affected the prey-predator relationship by the defense itself but also by plastic movement behavior. On the community movement level, I used a field mesocosm experiment to explore the role of dispersal (time i.e., from the egg bank into the water body and space i.e., between water bodies) in shaping zooplankton metacommunities. My results revealed that priority effects and taxon-specific dispersal limitation influenced community composition. Additionally, different modes of dispersal also generated distinct community structures. The egg bank and biotic vectors (i.e. mobile links) played significant roles in the colonization of newly available habitat patches. One crucial aspect that influences zooplankton species after arrival in new habitats is the local environmental conditions. By using common garden experiments, I assessed the performance of zooplankton communities in their home vs away environments in a group of ponds embedded within an agricultural landscape. I identified environmental filtering as a driving factor as zooplankton communities from individual ponds developed differently in their home and away environments. On the individual species level, there was no consistent indication of local adaptation. For some species, I found a higher abundance/fitness in their home environment, but for others, the opposite was the case, and some cases were indifferent. Overall, the thesis highlights the links between movement and biodiversity patterns, ranging from the individual active movement to the community level.},
  language  = {en}
}
@phdthesis{Libon2023,
  author    = {Libon, L{\´e}lia},
  title     = {Stability of magnesite in the Earth lower mantle: insight from high-pressure and high-temperature experiments},
  doi       = {10.25932/publishup-60461},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-604616},
  school      = {Universit{\"a}t Potsdam},
  pages     = {ix, 114, xvi},
  year      = {2023},
  abstract  = {Carbonates carried in subducting slabs may play a major role in sourcing and storing carbon in the deep Earth's interior. Current estimates indicate that between 40 to 66 million tons of carbon per year enter subduction zones, but it is uncertain how much of it reaches the lower mantle. It appears that most of this carbon might be extracted from subducting slabs at the mantle wedge and only a limited amount continues deeper and eventually reaches the deep mantle. However, estimations on deeply subducted carbon broadly range from 0.0001 to 52 million tons of carbon per year. This disparity is primarily due to the limited understanding of the survival of carbonate minerals during their transport to deep mantle conditions. Indeed, carbon has very low solubility in mantle silicates, therefore it is expected to be stored primarily in accessory phases such as carbonates. Among those carbonates, magnesite (MgCO3), as a single phase, is the most stable under all mantle conditions. However, experimental investigation on the stability of magnesite in contact with SiO2 at lower mantle conditions suggests that magnesite is stable only along a cold subducted slab geotherm. Furthermore, our understanding of magnesite's stability when interacting with more complex mantle silicate phases remains incomplete. In the first part of this dissertation, laser-heated diamond anvil cells and multi-anvil apparatus experiments were performed to investigate the stability of magnesite in contact with iron-bearing mantle silicates. Sub-solidus reactions, melting, decarbonation and diamond formation were examined from shallow to mid-lower mantle conditions (25 to 68 GPa; 1300 to 2000 K). Multi-anvil experiments at 25 GPa show the formation of carbonate-rich melt, bridgmanite, and stishovite with melting occurring at a temperature corresponding to all geotherms except the coldest one. In situ X-ray diffraction, in laser-heating diamond anvil cells experiments, shows crystallization of bridgmanite and stishovite but no melt phase was detected in situ at high temperatures. To detect decarbonation phases such as diamond, Raman spectroscopy was used. Crystallization of diamonds is observed as a sub-solidus process even at temperatures relevant and lower than the coldest slab geotherm (1350 K at 33 GPa). Data obtained from this work suggest that magnesite is unstable in contact with the surrounding peridotite mantle in the upper-most lower mantle. The presence of magnesite instead induces melting under oxidized conditions and/or foster diamond formation under more reduced conditions, at depths ∼700 km. Consequently, carbonates will be removed from the carbonate-rich slabs at shallow lower mantle conditions, where subducted slabs can stagnate. Therefore, the transport of carbonate to deeper depths will be restricted, supporting the presence of a barrier for carbon subduction at the top of the lower mantle. Moreover, the reduction of magnesite, forming diamonds provides additional evidence that super-deep diamond crystallization is related to the reduction of carbonates or carbonated-rich melt. The second part of this dissertation presents the development of a portable laser-heating system optimized for X-ray emission spectroscopy (XES) or nuclear inelastic scattering (NIS) spectroscopy with signal collection at near 90◦. The laser-heated diamond anvil cell is the only static pressure device that can replicate the pressure and temperatures of the Earth's lower mantle and core. The high temperatures are reached by using high-powered lasers focused on the sample contained between the diamond anvils. Moreover, diamonds' transparency to X-rays enables in situ X-ray spectroscopy measurements that can probe the sample under high-temperature and high-pressure conditions. Therefore, the development of portable laser-heating systems has linked high-pressure and temperature research with high-resolution X-ray spectroscopy techniques to synchrotron beamlines that do not have a dedicated, permanent, laser-heating system. A general description of the system is provided, as well as details on the use of a parabolic mirror as a reflective imaging objective for on-axis laser heating and radiospectrometric temperature measurements with zero attenuation of incoming X-rays. The parabolic mirror improves the accuracy of temperature measurements free from chromatic aberrations in a wide spectral range and its perforation permits in situ X-rays measurement at synchrotron facilities. The parabolic mirror is a well-suited alternative to refractive objectives in laser heating systems, which will facilitate future applications in the use of CO2 lasers.},
  language  = {en}
}
@phdthesis{Sakizloglou2023,
  author    = {Sakizloglou, Lucas},
  title     = {Evaluating temporal queries over history-aware architectural runtime models},
  doi       = {10.25932/publishup-60439},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-604396},
  school      = {Universit{\"a}t Potsdam},
  pages     = {v, 168},
  year      = {2023},
  abstract  = {In model-driven engineering, the adaptation of large software systems with dynamic structure is enabled by architectural runtime models. Such a model represents an abstract state of the system as a graph of interacting components. Every relevant change in the system is mirrored in the model and triggers an evaluation of model queries, which search the model for structural patterns that should be adapted. This thesis focuses on a type of runtime models where the expressiveness of the model and model queries is extended to capture past changes and their timing. These history-aware models and temporal queries enable more informed decision-making during adaptation, as they support the formulation of requirements on the evolution of the pattern that should be adapted. However, evaluating temporal queries during adaptation poses significant challenges. First, it implies the capability to specify and evaluate requirements on the structure, as well as the ordering and timing in which structural changes occur. Then, query answers have to reflect that the history-aware model represents the architecture of a system whose execution may be ongoing, and thus answers may depend on future changes. Finally, query evaluation needs to be adequately fast and memory-efficient despite the increasing size of the history---especially for models that are altered by numerous, rapid changes. The thesis presents a query language and a querying approach for the specification and evaluation of temporal queries. These contributions aim to cope with the challenges of evaluating temporal queries at runtime, a prerequisite for history-aware architectural monitoring and adaptation which has not been systematically treated by prior model-based solutions. The distinguishing features of our contributions are: the specification of queries based on a temporal logic which encodes structural patterns as graphs; the provision of formally precise query answers which account for timing constraints and ongoing executions; the incremental evaluation which avoids the re-computation of query answers after each change; and the option to discard history that is no longer relevant to queries. The query evaluation searches the model for occurrences of a pattern whose evolution satisfies a temporal logic formula. Therefore, besides model-driven engineering, another related research community is runtime verification. The approach differs from prior logic-based runtime verification solutions by supporting the representation and querying of structure via graphs and graph queries, respectively, which is more efficient for queries with complex patterns. We present a prototypical implementation of the approach and measure its speed and memory consumption in monitoring and adaptation scenarios from two application domains, with executions of an increasing size. We assess scalability by a comparison to the state-of-the-art from both related research communities. The implementation yields promising results, which pave the way for sophisticated history-aware self-adaptation solutions and indicate that the approach constitutes a highly effective technique for runtime monitoring on an architectural level.},
  language  = {en}
}
@phdthesis{Afifi2023,
  author    = {Afifi, Haitham},
  title     = {Wireless In-Network Processing for Multimedia Applications},
  doi       = {10.25932/publishup-60437},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-604371},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xiii, 233},
  year      = {2023},
  abstract  = {With the recent growth of sensors, cloud computing handles the data processing of many applications. Processing some of this data on the cloud raises, however, many concerns regarding, e.g., privacy, latency, or single points of failure. Alternatively, thanks to the development of embedded systems, smart wireless devices can share their computation capacity, creating a local wireless cloud for in-network processing. In this context, the processing of an application is divided into smaller jobs so that a device can run one or more jobs. The contribution of this thesis to this scenario is divided into three parts. In part one, I focus on wireless aspects, such as power control and interference management, for deciding which jobs to run on which node and how to route data between nodes. Hence, I formulate optimization problems and develop heuristic and meta-heuristic algorithms to allocate wireless and computation resources. Additionally, to deal with multiple applications competing for these resources, I develop a reinforcement learning (RL) admission controller to decide which application should be admitted. Next, I look into acoustic applications to improve wireless throughput by using microphone clock synchronization to synchronize wireless transmissions. In the second part, I jointly work with colleagues from the acoustic processing field to optimize both network and application (i.e., acoustic) qualities. My contribution focuses on the network part, where I study the relation between acoustic and network qualities when selecting a subset of microphones for collecting audio data or selecting a subset of optional jobs for processing these data; too many microphones or too many jobs can lessen quality by unnecessary delays. Hence, I develop RL solutions to select the subset of microphones under network constraints when the speaker is moving while still providing good acoustic quality. Furthermore, I show that autonomous vehicles carrying microphones improve the acoustic qualities of different applications. Accordingly, I develop RL solutions (single and multi-agent ones) for controlling these vehicles. In the third part, I close the gap between theory and practice. I describe the features of my open-source framework used as a proof of concept for wireless in-network processing. Next, I demonstrate how to run some algorithms developed by colleagues from acoustic processing using my framework. I also use the framework for studying in-network delays (wireless and processing) using different distributions of jobs and network topologies.},
  language  = {en}
}
@phdthesis{Lindinger2023,
  author    = {Lindinger, Jakob},
  title     = {Variational inference for composite Gaussian process models},
  doi       = {10.25932/publishup-60444},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-604441},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xi, 122},
  year      = {2023},
  abstract  = {Most machine learning methods provide only point estimates when being queried to predict on new data. This is problematic when the data is corrupted by noise, e.g. from imperfect measurements, or when the queried data point is very different to the data that the machine learning model has been trained with. Probabilistic modelling in machine learning naturally equips predictions with corresponding uncertainty estimates which allows a practitioner to incorporate information about measurement noise into the modelling process and to know when not to trust the predictions. A well-understood, flexible probabilistic framework is provided by Gaussian processes that are ideal as building blocks of probabilistic models. They lend themself naturally to the problem of regression, i.e., being given a set of inputs and corresponding observations and then predicting likely observations for new unseen inputs, and can also be adapted to many more machine learning tasks. However, exactly inferring the optimal parameters of such a Gaussian process model (in a computationally tractable manner) is only possible for regression tasks in small data regimes. Otherwise, approximate inference methods are needed, the most prominent of which is variational inference. In this dissertation we study models that are composed of Gaussian processes embedded in other models in order to make those more flexible and/or probabilistic. The first example are deep Gaussian processes which can be thought of as a small network of Gaussian processes and which can be employed for flexible regression. The second model class that we study are Gaussian process state-space models. These can be used for time-series modelling, i.e., the task of being given a stream of data ordered by time and then predicting future observations. For both model classes the state-of-the-art approaches offer a trade-off between expressive models and computational properties (e.g. speed or convergence properties) and mostly employ variational inference. Our goal is to improve inference in both models by first getting a deep understanding of the existing methods and then, based on this, to design better inference methods. We achieve this by either exploring the existing trade-offs or by providing general improvements applicable to multiple methods. We first provide an extensive background, introducing Gaussian processes and their sparse (approximate and efficient) variants. We continue with a description of the models under consideration in this thesis, deep Gaussian processes and Gaussian process state-space models, including detailed derivations and a theoretical comparison of existing methods. Then we start analysing deep Gaussian processes more closely: Trading off the properties (good optimisation versus expressivity) of state-of-the-art methods in this field, we propose a new variational inference based approach. We then demonstrate experimentally that our new algorithm leads to better calibrated uncertainty estimates than existing methods. Next, we turn our attention to Gaussian process state-space models, where we closely analyse the theoretical properties of existing methods.The understanding gained in this process leads us to propose a new inference scheme for general Gaussian process state-space models that incorporates effects on multiple time scales. This method is more efficient than previous approaches for long timeseries and outperforms its comparison partners on data sets in which effects on multiple time scales (fast and slowly varying dynamics) are present. Finally, we propose a new inference approach for Gaussian process state-space models that trades off the properties of state-of-the-art methods in this field. By combining variational inference with another approximate inference method, the Laplace approximation, we design an efficient algorithm that outperforms its comparison partners since it achieves better calibrated uncertainties.},
  language  = {en}
}
@phdthesis{Discher2023,
  author    = {Discher, S{\"o}ren},
  title     = {Real-Time Rendering Techniques for Massive 3D Point Clouds},
  doi       = {10.25932/publishup-60164},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-601641},
  school      = {Universit{\"a}t Potsdam},
  pages     = {ix, 123},
  year      = {2023},
  abstract  = {Today, point clouds are among the most important categories of spatial data, as they constitute digital 3D models of the as-is reality that can be created at unprecedented speed and precision. However, their unique properties, i.e., lack of structure, order, or connectivity information, necessitate specialized data structures and algorithms to leverage their full precision. In particular, this holds true for the interactive visualization of point clouds, which requires to balance hardware limitations regarding GPU memory and bandwidth against a naturally high susceptibility to visual artifacts. This thesis focuses on concepts, techniques, and implementations of robust, scalable, and portable 3D visualization systems for massive point clouds. To that end, a number of rendering, visualization, and interaction techniques are introduced, that extend several basic strategies to decouple rendering efforts and data management: First, a novel visualization technique that facilitates context-aware filtering, highlighting, and interaction within point cloud depictions. Second, hardware-specific optimization techniques that improve rendering performance and image quality in an increasingly diversified hardware landscape. Third, natural and artificial locomotion techniques for nausea-free exploration in the context of state-of-the-art virtual reality devices. Fourth, a framework for web-based rendering that enables collaborative exploration of point clouds across device ecosystems and facilitates the integration into established workflows and software systems. In cooperation with partners from industry and academia, the practicability and robustness of the presented techniques are showcased via several case studies using representative application scenarios and point cloud data sets. In summary, the work shows that the interactive visualization of point clouds can be implemented by a multi-tier software architecture with a number of domain-independent, generic system components that rely on optimization strategies specific to large point clouds. It demonstrates the feasibility of interactive, scalable point cloud visualization as a key component for distributed IT solutions that operate with spatial digital twins, providing arguments in favor of using point clouds as a universal type of spatial base data usable directly for visualization purposes.},
  language  = {en}
}
@phdthesis{Li2023,
  author    = {Li, Zhen},
  title     = {Formation of Sub-Permafrost Methane Hydrate Reproduced by Numerical Modeling},
  doi       = {10.25932/publishup-60330},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-603302},
  school      = {Universit{\"a}t Potsdam},
  pages     = {XII, 109},
  year      = {2023},
  abstract  = {Natural gas hydrates are ice-like crystalline compounds containing water cavities that trap natural gas molecules like methane (CH4), which is a potent greenhouse gas with high energy density. The Mallik site at the Mackenzie Delta in the Canadian Arctic contains a large volume of technically recoverable CH4 hydrate beneath the base of the permafrost. Understanding how the sub-permafrost hydrate is distributed can aid in searching for the ideal locations for deploying CH4 production wells to develop the hydrate as a cleaner alternative to crude oil or coal. Globally, atmospheric warming driving permafrost thaw results in sub-permafrost hydrate dissociation, releasing CH4 into the atmosphere to intensify global warming. It is therefore crucial to evaluate the potential risk of hydrate dissociation due to permafrost degradation. To quantitatively predict hydrate distribution and volume in complex sub-permafrost environments, a numerical framework was developed to simulate sub-permafrost hydrate formation by coupling the equilibrium CH4-hydrate formation approach with a fluid flow and transport simulator (TRANSPORTSE). In addition, integrating the equations of state describing ice melting and forming with TRANSPORTSE enabled this framework to simulate the permafrost evolution during the sub-permafrost hydrate formation. A modified sub-permafrost hydrate formation mechanism for the Mallik site is presented in this study. According to this mechanism, the CH4-rich fluids have been vertically transported since the Late Pleistocene from deep overpressurized zones via geologic fault networks to form the observed hydrate deposits in the Kugmallit-Mackenzie Bay Sequences. The established numerical framework was verified by a benchmark of hydrate formation via dissolved methane. Model calibration was performed based on laboratory data measured during a multi-stage hydrate formation experiment undertaken in the LArge scale Reservoir Simulator (LARS). As the temporal and spatial evolution of simulated and observed hydrate saturation matched well, the LARS model was therefore validated. This laboratory-scale model was then upscaled to a field-scale 2D model generated from a seismic transect across the Mallik site. The simulation confirmed the feasibility of the introduced sub-permafrost hydrate formation mechanism by demonstrating consistency with field observations. The 2D model was extended to the first 3D model of the Mallik site by using well-logs and seismic profiles, to investigate the geologic controls on the spatial hydrate distribution. An assessment of this simulation revealed the hydraulic contribution of each geological element, including relevant fault networks and sedimentary sequences. Based on the simulation results, the observed heterogeneous distribution of sub-permafrost hydrate resulted from the combined factors of the source-gas generation rate, subsurface temperature, and the permeability of geologic elements. Analysis of the results revealed that the Mallik permafrost was heated by 0.8-1.3 °C, induced by the global temperature increase of 0.44 °C and accelerated by Arctic amplification from the early 1970s to the mid-2000s. This study presents a numerical framework that can be applied to study the formation of the permafrost-hydrate system from laboratory to field scales, across timescales ranging from hours to millions of years. Overall, these simulations deepen the knowledge about the dominant factors controlling the spatial hydrate distribution in sub-permafrost environments with heterogeneous geologic elements. The framework can support improving the design of hydrate formation experiments and provide valuable contributions to future industrial hydrate exploration and exploitation activities.},
  language  = {en}
}
@phdthesis{FortesMartin2023,
  author    = {Fortes Mart{\´i}n, Rebeca},
  title     = {Water-in-oil microemulsions as soft-templates to mediate nanoparticle interfacial assembly into hybrid nanostructures},
  doi       = {10.25932/publishup-57180},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-571801},
  school      = {Universit{\"a}t Potsdam},
  pages     = {119},
  year      = {2023},
  abstract  = {Hybrid nanomaterials offer the combination of individual properties of different types of nanoparticles. Some strategies for the development of new nanostructures in larger scale rely on the self-assembly of nanoparticles as a bottom-up approach. The use of templates provides ordered assemblies in defined patterns. In a typical soft-template, nanoparticles and other surface-active agents are incorporated into non-miscible liquids. The resulting self-organized dispersions will mediate nanoparticle interactions to control the subsequent self-assembly. Especially interactions between nanoparticles of very different dispersibility and functionality can be directed at a liquid-liquid interface. In this project, water-in-oil microemulsions were formulated from quasi-ternary mixtures with Aerosol-OT as surfactant. Oleyl-capped superparamagnetic iron oxide and/or silver nanoparticles were incorporated in the continuous organic phase, while polyethyleneimine-stabilized gold nanoparticles were confined in the dispersed water droplets. Each type of nanoparticle can modulate the surfactant film and the inter-droplet interactions in diverse ways, and their combination causes synergistic effects. Interfacial assemblies of nanoparticles resulted after phase-separation. On one hand, from a biphasic Winsor type II system at low surfactant concentration, drop-casting of the upper phase afforded thin films of ordered nanoparticles in filament-like networks. Detailed characterization proved that this templated assembly over a surface is based on the controlled clustering of nanoparticles and the elongation of the microemulsion droplets. This process offers versatility to use different nanoparticle compositions by keeping the surface functionalization, in different solvents and over different surfaces. On the other hand, a magnetic heterocoagulate was formed at higher surfactant concentration, whose phase-transfer from oleic acid to water was possible with another auxiliary surfactant in ethanol-water mixture. When the original components were initially mixed under heating, defined oil-in-water, magnetic-responsive nanostructures were obtained, consisting on water-dispersible nanoparticle domains embedded by a matrix-shell of oil-dispersible nanoparticles. Herein, two different approaches were demonstrated to form diverse hybrid nanostructures from reverse microemulsions as self-organized dispersions of the same components. This shows that microemulsions are versatile soft-templates not only for the synthesis of nanoparticles, but also for their self-assembly, which suggest new approaches towards the production of new sophisticated nanomaterials in larger scale.},
  language  = {en}
}
@phdthesis{Pramanik2023,
  author    = {Pramanik, Shreya},
  title     = {Protein reconstitution in giant vesicles},
  doi       = {10.25932/publishup-61278},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-612781},
  school      = {Universit{\"a}t Potsdam},
  pages     = {VIII, 132},
  year      = {2023},
  abstract  = {Das Leben auf der Erde ist vielf{\"a}ltig und reicht von einzelligen Organismen bis hin zu mehrzelligen Lebewesen wie dem Menschen. Obwohl es Theorien dar{\"u}ber gibt, wie sich diese Organismen entwickelt haben k{\"o}nnten, verstehen wir nur wenig dar{\"u}ber, wie "Leben" aus Molek{\"u}len entstanden ist. Die synthetische Bottom-up-Biologie zielt darauf ab, minimale Zellen zu schaffen, indem sie verschiedene Module wie Kompartimentierung, Wachstum, Teilung und zellul{\"a}re Kommunikation kombiniert. Alle lebenden Zellen haben eine Membran, die sie von dem sie umgebenden w{\"a}ssrigen Medium trennt und sie sch{\"u}tzt. Dar{\"u}ber hinaus haben alle eukaryotischen Zellen Organellen, die von intrazellul{\"a}ren Membranen umschlossen sind. Jede Zellmembran besteht haupts{\"a}chlich aus einer Lipiddoppelschicht mit Membranproteinen. Lipide sind amphiphile Molek{\"u}le, die molekulare Doppelschichten aus zwei Lipid-Monoschichten oder Bl{\"a}ttchen bilden. Die hydrophoben Ketten der Lipide sind einander zugewandt, w{\"a}hrend ihre hydrophilen Kopfgruppen die Grenzfl{\"a}chen zur w{\"a}ssrigen Umgebung bilden. Riesenvesikel sind Modellmembransysteme, die Kompartimente mit einer Gr{\"o}ße von mehreren Mikrometern bilden und von einer einzigen Lipiddoppelschicht umgeben sind. Die Gr{\"o}ße der Riesenvesikel ist mit der Gr{\"o}ße von Zellen vergleichbar und macht sie zu guten Membranmodellen, die mit einem Lichtmikroskop untersucht werden k{\"o}nnen. Allerdings fehlen den Riesenvesikelmembranen nach der ersten Pr{\"a}paration Membranproteine, die in weiteren Pr{\"a}parationsschritten in diese Membranen eingebaut werden m{\"u}ssen. Je nach Protein kann es entweder {\"u}ber Ankerlipide an eines der Membranbl{\"a}ttchen gebunden oder {\"u}ber seine Transmembrandom{\"a}nen in die Lipiddoppelschicht eingebaut werden. Diese Arbeit befasst sich mit der Herstellung von Riesenvesikeln und der Rekonstitution von Proteinen in diesen Vesikeln. Außerdem wird ein mikrofluidischer Chip entworfen, der in verschiedenen Experimenten verwendet werden kann. Die Ergebnisse dieser Arbeit werden anderen Forschern helfen, die Protokolle f{\"u}r die Herstellung von GUVs zu verstehen, Proteine in GUVs zu rekonstituieren und Experimente mit dem mikrofluidischen Chip durchzuf{\"u}hren. Auf diese Weise wird die vorliegende Arbeit f{\"u}r das langfristige Ziel von Nutzen sein, die verschiedenen Module der synthetischen Biologie zu kombinieren, um eine Minimalzelle zu schaffen.},
  language  = {en}
}
@phdthesis{GomezZapata2023,
  author    = {G{\´o}mez Zapata, Juan Camilo},
  title     = {Towards unifying approaches in exposure modelling for scenario-based multi-hazard risk assessments},
  doi       = {10.25932/publishup-58614},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-586140},
  school      = {Universit{\"a}t Potsdam},
  pages     = {iii, xiii, 155},
  year      = {2023},
  abstract  = {This cumulative thesis presents a stepwise investigation of the exposure modelling process for risk assessment due to natural hazards while highlighting its, to date, not much-discussed importance and associated uncertainties. Although "exposure" refers to a very broad concept of everything (and everyone) that is susceptible to damage, in this thesis it is narrowed down to the modelling of large-area residential building stocks. Classical building exposure models for risk applications have been constructed fully relying on unverified expert elicitation over data sources (e.g., outdated census datasets), and hence have been implicitly assumed to be static in time and in space. Moreover, their spatial representation has also typically been simplified by geographically aggregating the inferred composition onto coarse administrative units whose boundaries do not always capture the spatial variability of the hazard intensities required for accurate risk assessments. These two shortcomings and the related epistemic uncertainties embedded within exposure models are tackled in the first three chapters of the thesis. The exposure composition of large-area residential building stocks is studied on the scope of scenario-based earthquake loss models. Then, the proposal of optimal spatial aggregation areas of exposure models for various hazard-related vulnerabilities is presented, focusing on ground-shaking and tsunami risks. Subsequently, once the experience is gained in the study of the composition and spatial aggregation of exposure for various hazards, this thesis moves towards a multi-hazard context while addressing cumulative damage and losses due to consecutive hazard scenarios. This is achieved by proposing a novel method to account for the pre-existing damage descriptions on building portfolios as a key input to account for scenario-based multi-risk assessment. Finally, this thesis shows how the integration of the aforementioned elements can be used in risk communication practices. This is done through a modular architecture based on the exploration of quantitative risk scenarios that are contrasted with social risk perceptions of the directly exposed communities to natural hazards. In Chapter 1, a Bayesian approach is proposed to update the prior assumptions on such composition (i.e., proportions per building typology). This is achieved by integrating high-quality real observations and then capturing the intrinsic probabilistic nature of the exposure model. Such observations are accounted as real evidence from both: field inspections (Chapter 2) and freely available data sources to update existing (but outdated) exposure models (Chapter 3). In these two chapters, earthquake scenarios with parametrised ground motion fields were transversally used to investigate the role of such epistemic uncertainties related to the exposure composition through sensitivity analyses. Parametrised scenarios of seismic ground shaking were the hazard input utilised to study the physical vulnerability of building portfolios. The second issue that was investigated, which refers to the spatial aggregation of building exposure models, was investigated within two decoupled vulnerability contexts: due to seismic ground shaking through the integration of remote sensing techniques (Chapter 3); and within a multi-hazard context by integrating the occurrence of associated tsunamis (Chapter 4). Therein, a careful selection of the spatial aggregation entities while pursuing computational efficiency and accuracy in the risk estimates due to such independent hazard scenarios (i.e., earthquake and tsunami) are discussed. Therefore, in this thesis, the physical vulnerability of large-area building portfolios due to tsunamis is considered through two main frames: considering and disregarding the interaction at the vulnerability level, through consecutive and decoupled hazard scenarios respectively, which were then contrasted. Contrary to Chapter 4, where no cumulative damages are addressed, in Chapter 5, data and approaches, which were already generated in former sections, are integrated with a novel modular method to ultimately study the likely interactions at the vulnerability level on building portfolios. This is tested by evaluating cumulative damages and losses after earthquakes with increasing magnitude followed by their respective tsunamis. Such a novel method is grounded on the possibility of re-using existing fragility models within a probabilistic framework. The same approach is followed in Chapter 6 to forecast the likely cumulative damages to be experienced by a building stock located in a volcanic multi-hazard setting (ash-fall and lahars). In that section, special focus was made on the manner the forecasted loss metrics are communicated to locally exposed communities. Co-existing quantitative scientific approaches (i.e., comprehensive exposure models; explorative risk scenarios involving single and multiple hazards) and semi-qualitative social risk perception (i.e., level of understanding that the exposed communities have about their own risk) were jointly considered. Such an integration ultimately allowed this thesis to also contribute to enhancing preparedness, science divulgation at the local level as well as technology transfer initiatives. Finally, a synthesis of this thesis along with some perspectives for improvement and future work are presented.},
  language  = {en}
}
@phdthesis{Zali2023,
  author    = {Zali, Zahra},
  title     = {Volcanic tremor analysis based on advanced signal processing concepts including music information retrieval (MIR) strategies},
  doi       = {10.25932/publishup-61086},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-610866},
  school      = {Universit{\"a}t Potsdam},
  pages     = {viii, 95},
  year      = {2023},
  abstract  = {Volcanoes are one of the Earth's most dynamic zones and responsible for many changes in our planet. Volcano seismology aims to provide an understanding of the physical processes in volcanic systems and anticipate the style and timing of eruptions by analyzing the seismic records. Volcanic tremor signals are usually observed in the seismic records before or during volcanic eruptions. Their analysis contributes to evaluate the evolving volcanic activity and potentially predict eruptions. Years of continuous seismic monitoring now provide useful information for operational eruption forecasting. The continuously growing amount of seismic recordings, however, poses a challenge for analysis, information extraction, and interpretation, to support timely decision making during volcanic crises. Furthermore, the complexity of eruption processes and precursory activities makes the analysis challenging. A challenge in studying seismic signals of volcanic origin is the coexistence of transient signal swarms and long-lasting volcanic tremor signals. Separating transient events from volcanic tremors can, therefore, contribute to improving our understanding of the underlying physical processes. Some similar issues (data reduction, source separation, extraction, and classification) are addressed in the context of music information retrieval (MIR). The signal characteristics of acoustic and seismic recordings comprise a number of similarities. This thesis is going beyond classical signal analysis techniques usually employed in seismology by exploiting similarities of seismic and acoustic signals and building the information retrieval strategy on the expertise developed in the field of MIR. First, inspired by the idea of harmonic-percussive separation (HPS) in musical signal processing, I have developed a method to extract harmonic volcanic tremor signals and to detect transient events from seismic recordings. This provides a clean tremor signal suitable for tremor investigation along with a characteristic function suitable for earthquake detection. Second, using HPS algorithms, I have developed a noise reduction technique for seismic signals. This method is especially useful for denoising ocean bottom seismometers, which are highly contaminated by noise. The advantage of this method compared to other denoising techniques is that it doesn't introduce distortion to the broadband earthquake waveforms, which makes it reliable for different applications in passive seismological analysis. Third, to address the challenge of extracting information from high-dimensional data and investigating the complex eruptive phases, I have developed an advanced machine learning model that results in a comprehensive signal processing scheme for volcanic tremors. Using this method seismic signatures of major eruptive phases can be automatically detected. This helps to provide a chronology of the volcanic system. Also, this model is capable to detect weak precursory volcanic tremors prior to the eruption, which could be used as an indicator of imminent eruptive activity. The extracted patterns of seismicity and their temporal variations finally provide an explanation for the transition mechanism between eruptive phases.},
  language  = {en}
}
@phdthesis{Perscheid2023,
  author    = {Perscheid, Cindy},
  title     = {Integrative biomarker detection using prior knowledge on gene expression data sets},
  doi       = {10.25932/publishup-58241},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-582418},
  school      = {Universit{\"a}t Potsdam},
  pages     = {ix, 197},
  year      = {2023},
  abstract  = {Gene expression data is analyzed to identify biomarkers, e.g. relevant genes, which serve for diagnostic, predictive, or prognostic use. Traditional approaches for biomarker detection select distinctive features from the data based exclusively on the signals therein, facing multiple shortcomings in regards to overfitting, biomarker robustness, and actual biological relevance. Prior knowledge approaches are expected to address these issues by incorporating prior biological knowledge, e.g. on gene-disease associations, into the actual analysis. However, prior knowledge approaches are currently not widely applied in practice because they are often use-case specific and seldom applicable in a different scope. This leads to a lack of comparability of prior knowledge approaches, which in turn makes it currently impossible to assess their effectiveness in a broader context. Our work addresses the aforementioned issues with three contributions. Our first contribution provides formal definitions for both prior knowledge and the flexible integration thereof into the feature selection process. Central to these concepts is the automatic retrieval of prior knowledge from online knowledge bases, which allows for streamlining the retrieval process and agreeing on a uniform definition for prior knowledge. We subsequently describe novel and generalized prior knowledge approaches that are flexible regarding the used prior knowledge and applicable to varying use case domains. Our second contribution is the benchmarking platform Comprior. Comprior applies the aforementioned concepts in practice and allows for flexibly setting up comprehensive benchmarking studies for examining the performance of existing and novel prior knowledge approaches. It streamlines the retrieval of prior knowledge and allows for combining it with prior knowledge approaches. Comprior demonstrates the practical applicability of our concepts and further fosters the overall development and comparability of prior knowledge approaches. Our third contribution is a comprehensive case study on the effectiveness of prior knowledge approaches. For that, we used Comprior and tested a broad range of both traditional and prior knowledge approaches in combination with multiple knowledge bases on data sets from multiple disease domains. Ultimately, our case study constitutes a thorough assessment of a) the suitability of selected knowledge bases for integration, b) the impact of prior knowledge being applied at different integration levels, and c) the improvements in terms of classification performance, biological relevance, and overall robustness. In summary, our contributions demonstrate that generalized concepts for prior knowledge and a streamlined retrieval process improve the applicability of prior knowledge approaches. Results from our case study show that the integration of prior knowledge positively affects biomarker results, particularly regarding their robustness. Our findings provide the first in-depth insights on the effectiveness of prior knowledge approaches and build a valuable foundation for future research.},
  language  = {en}
}
@phdthesis{ArboledaZapata2023,
  author    = {Arboleda Zapata, Mauricio},
  title     = {Adapted inversion strategies for electrical resistivity data to explore layered near-surface environments},
  doi       = {10.25932/publishup-58135},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-581357},
  school      = {Universit{\"a}t Potsdam},
  pages     = {115},
  year      = {2023},
  abstract  = {The electrical resistivity tomography (ERT) method is widely used to investigate geological, geotechnical, and hydrogeological problems in inland and aquatic environments (i.e., lakes, rivers, and seas). The objective of the ERT method is to obtain reliable resistivity models of the subsurface that can be interpreted in terms of the subsurface structure and petrophysical properties. The reliability of the resulting resistivity models depends not only on the quality of the acquired data, but also on the employed inversion strategy. Inversion of ERT data results in multiple solutions that explain the measured data equally well. Typical inversion approaches rely on different deterministic (local) strategies that consider different smoothing and damping strategies to stabilize the inversion. However, such strategies suffer from the trade-off of smearing possible sharp subsurface interfaces separating layers with resistivity contrasts of up to several orders of magnitude. When prior information (e.g., from outcrops, boreholes, or other geophysical surveys) suggests sharp resistivity variations, it might be advantageous to adapt the parameterization and inversion strategies to obtain more stable and geologically reliable model solutions. Adaptations to traditional local inversions, for example, by using different structural and/or geostatistical constraints, may help to retrieve sharper model solutions. In addition, layer-based model parameterization in combination with local or global inversion approaches can be used to obtain models with sharp boundaries. In this thesis, I study three typical layered near-surface environments in which prior information is used to adapt 2D inversion strategies to favor layered model solutions. In cooperation with the coauthors of Chapters 2-4, I consider two general strategies. Our first approach uses a layer-based model parameterization and a well-established global inversion strategy to generate ensembles of model solutions and assess uncertainties related to the non-uniqueness of the inverse problem. We apply this method to invert ERT data sets collected in an inland coastal area of northern France (Chapter~2) and offshore of two Arctic regions (Chapter~3). Our second approach consists of using geostatistical regularizations with different correlation lengths. We apply this strategy to a more complex subsurface scenario on a local intermountain alluvial fan in southwestern Germany (Chapter~4). Overall, our inversion approaches allow us to obtain resistivity models that agree with the general geological understanding of the studied field sites. These strategies are rather general and can be applied to various geological environments where a layered subsurface structure is expected. The flexibility of our strategies allows adaptations to invert other kinds of geophysical data sets such as seismic refraction or electromagnetic induction methods, and could be considered for joint inversion approaches.},
  language  = {en}
}
@phdthesis{Stoltnow2023,
  author    = {Stoltnow, Malte},
  title     = {Magmatic-hydrothermal processes along the porphyry to epithermal transition},
  doi       = {10.25932/publishup-61140},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-611402},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xxviii, 132},
  year      = {2023},
  abstract  = {Magmatic-hydrothermal systems form a variety of ore deposits at different proximities to upper-crustal hydrous magma chambers, ranging from greisenization in the roof zone of the intrusion, porphyry mineralization at intermediate depths to epithermal vein deposits near the surface. The physical transport processes and chemical precipitation mechanisms vary between deposit types and are often still debated. The majority of magmatic-hydrothermal ore deposits are located along the Pacific Ring of Fire, whose eastern part is characterized by the Mesozoic to Cenozoic orogenic belts of the western North and South Americas, namely the American Cordillera. Major magmatic-hydrothermal ore deposits along the American Cordillera include (i) porphyry Cu(-Mo-Au) deposits (along the western cordilleras of Mexico, the western U.S., Canada, Chile, Peru, and Argentina); (ii) Climax- (and sub-) type Mo deposits (Colorado Mineral Belt and northern New Mexico); and (iii) porphyry and IS-type epithermal Sn(-W-Ag) deposits of the Central Andean Tin Belt (Bolivia, Peru and northern Argentina). The individual studies presented in this thesis primarily focus on the formation of different styles of mineralization located at different proximities to the intrusion in magmatic-hydrothermal systems along the American Cordillera. This includes (i) two individual geochemical studies on the Sweet Home Mine in the Colorado Mineral Belt (potential endmember of peripheral Climax-type mineralization); (ii) one numerical modeling study setup in a generic porphyry Cu-environment; and (iii) a numerical modeling study on the Central Andean Tin Belt-type Pirquitas Mine in NW Argentina. Microthermometric data of fluid inclusions trapped in greisen quartz and fluorite from the Sweet Home Mine (Detroit City Portal) suggest that the early-stage mineralization precipitated from low- to medium-salinity (1.5-11.5 wt.\% equiv. NaCl), CO2-bearing fluids at temperatures between 360 and 415°C and at depths of at least 3.5 km. Stable isotope and noble gas isotope data indicate that greisen formation and base metal mineralization at the Sweet Home Mine was related to fluids of different origins. Early magmatic fluids were the principal source for mantle-derived volatiles (CO2, H2S/SO2, noble gases), which subsequently mixed with significant amounts of heated meteoric water. Mixing of magmatic fluids with meteoric water is constrained by δ2Hw-δ18Ow relationships of fluid inclusions. The deep hydrothermal mineralization at the Sweet Home Mine shows features similar to deep hydrothermal vein mineralization at Climax-type Mo deposits or on their periphery. This suggests that fluid migration and the deposition of ore and gangue minerals in the Sweet Home Mine was triggered by a deep-seated magmatic intrusion. The second study on the Sweet Home Mine presents Re-Os molybdenite ages of 65.86±0.30 Ma from a Mo-mineralized major normal fault, namely the Contact Structure, and multimineral Rb-Sr isochron ages of 26.26±0.38 Ma and 25.3±3.0 Ma from gangue minerals in greisen assemblages. The age data imply that mineralization at the Sweet Home Mine formed in two separate events: Late Cretaceous (Laramide-related) and Oligocene (Rio Grande Rift-related). Thus, the age of Mo mineralization at the Sweet Home Mine clearly predates that of the Oligocene Climax-type deposits elsewhere in the Colorado Mineral Belt. The Re-Os and Rb-Sr ages also constrain the age of the latest deformation along the Contact Structure to between 62.77±0.50 Ma and 26.26±0.38 Ma, which was employed and/or crosscut by Late Cretaceous and Oligocene fluids. Along the Contact Structure Late Cretaceous molybdenite is spatially associated with Oligocene minerals in the same vein system, a feature that precludes molybdenite recrystallization or reprecipitation by Oligocene ore fluids. Ore precipitation in porphyry copper systems is generally characterized by metal zoning (Cu-Mo to Zn-Pb-Ag), which is suggested to be variably related to solubility decreases during fluid cooling, fluid-rock interactions, partitioning during fluid phase separation and mixing with external fluids. The numerical modeling study setup in a generic porphyry Cu-environment presents new advances of a numerical process model by considering published constraints on the temperature- and salinity-dependent solubility of Cu, Pb and Zn in the ore fluid. This study investigates the roles of vapor-brine separation, halite saturation, initial metal contents, fluid mixing, and remobilization as first-order controls of the physical hydrology on ore formation. The results show that the magmatic vapor and brine phases ascend with different residence times but as miscible fluid mixtures, with salinity increases generating metal-undersaturated bulk fluids. The release rates of magmatic fluids affect the location of the thermohaline fronts, leading to contrasting mechanisms for ore precipitation: higher rates result in halite saturation without significant metal zoning, lower rates produce zoned ore shells due to mixing with meteoric water. Varying metal contents can affect the order of the final metal precipitation sequence. Redissolution of precipitated metals results in zoned ore shell patterns in more peripheral locations and also decouples halite saturation from ore precipitation. The epithermal Pirquitas Sn-Ag-Pb-Zn mine in NW Argentina is hosted in a domain of metamorphosed sediments without geological evidence for volcanic activity within a distance of about 10 km from the deposit. However, recent geochemical studies of ore-stage fluid inclusions indicate a significant contribution of magmatic volatiles. This study tested different formation models by applying an existing numerical process model for porphyry-epithermal systems with a magmatic intrusion located either at a distance of about 10 km underneath the nearest active volcano or hidden underneath the deposit. The results show that the migration of the ore fluid over a 10-km distance results in metal precipitation by cooling before the deposit site is reached. In contrast, simulations with a hidden magmatic intrusion beneath the Pirquitas deposit are in line with field observations, which include mineralized hydrothermal breccias in the deposit area.},
  language  = {en}
}
@phdthesis{Kossmann2023,
  author    = {Koßmann, Jan},
  title     = {Unsupervised database optimization},
  doi       = {10.25932/publishup-58949},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-589490},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xi, 203},
  year      = {2023},
  abstract  = {The amount of data stored in databases and the complexity of database workloads are ever- increasing. Database management systems (DBMSs) offer many configuration options, such as index creation or unique constraints, which must be adapted to the specific instance to efficiently process large volumes of data. Currently, such database optimization is complicated, manual work performed by highly skilled database administrators (DBAs). In cloud scenarios, manual database optimization even becomes infeasible: it exceeds the abilities of the best DBAs due to the enormous number of deployed DBMS instances (some providers maintain millions of instances), missing domain knowledge resulting from data privacy requirements, and the complexity of the configuration tasks. Therefore, we investigate how to automate the configuration of DBMSs efficiently with the help of unsupervised database optimization. While there are numerous configuration options, in this thesis, we focus on automatic index selection and the use of data dependencies, such as functional dependencies, for query optimization. Both aspects have an extensive performance impact and complement each other by approaching unsupervised database optimization from different perspectives. Our contributions are as follows: (1) we survey automated state-of-the-art index selection algorithms regarding various criteria, e.g., their support for index interaction. We contribute an extensible platform for evaluating the performance of such algorithms with industry-standard datasets and workloads. The platform is well-received by the community and has led to follow-up research. With our platform, we derive the strengths and weaknesses of the investigated algorithms. We conclude that existing solutions often have scalability issues and cannot quickly determine (near-)optimal solutions for large problem instances. (2) To overcome these limitations, we present two new algorithms. Extend determines (near-)optimal solutions with an iterative heuristic. It identifies the best index configurations for the evaluated benchmarks. Its selection runtimes are up to 10 times lower compared with other near-optimal approaches. SWIRL is based on reinforcement learning and delivers solutions instantly. These solutions perform within 3 \% of the optimal ones. Extend and SWIRL are available as open-source implementations. (3) Our index selection efforts are complemented by a mechanism that analyzes workloads to determine data dependencies for query optimization in an unsupervised fashion. We describe and classify 58 query optimization techniques based on functional, order, and inclusion dependencies as well as on unique column combinations. The unsupervised mechanism and three optimization techniques are implemented in our open-source research DBMS Hyrise. Our approach reduces the Join Order Benchmark's runtime by 26 \% and accelerates some TPC-DS queries by up to 58 times. Additionally, we have developed a cockpit for unsupervised database optimization that allows interactive experiments to build confidence in such automated techniques. In summary, our contributions improve the performance of DBMSs, support DBAs in their work, and enable them to contribute their time to other, less arduous tasks.},
  language  = {en}
}
@phdthesis{Rigamonti2023,
  author    = {Rigamonti, Lia},
  title     = {Use of digital media for remote instruction in exercise sciences education and research},
  doi       = {10.25932/publishup-58364},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-583642},
  school      = {Universit{\"a}t Potsdam},
  pages     = {129},
  year      = {2023},
  abstract  = {To grant high-quality evidence-based research in the field of exercise sciences, it is often necessary for various institutions to collaborate over longer distances and internationally. Here, not only with regard to the recent COVID-19-pandemic, digital means provide new options for remote scientific exchanges. This thesis is meant to analyse and test digital opportunities to support the dissemination of knowledge and instruction of investigators about defined examination protocols in an international multi-center context. The project consisted of three studies. The first study, a questionnaire-based survey, aimed at learning about the opinions and preferences of digital learning or social media among students of sport science faculties in two universities each in Germany, the UK and Italy. Based on these findings, in a second study, an examination video of an ultrasound determination of the intima-media-thickness and diameter of an artery was distributed by a messenger app to doctors and nursing personnel as simulated investigators and efficacy of the test setting was analysed. Finally, a third study integrated the use of an augmented reality device for direct remote supervision of the same ultrasound examinations in a long-distance international setting with international experts from the fields of engineering and sports science and later remote supervision of augmented reality equipped physicians performing a given task. The first study with 229 participating students revealed a high preference for YouTube to receive video-based knowledge as well as a preference for using WhatsApp and Facebook for peer-to-peer contacts for learning purposes and to exchange and discuss knowledge. In the second study, video-based instructions send by WhatsApp messenger showed high approval of the setup in both study groups, one with doctors familiar with the use of ultrasound technology as well as one with nursing staff who were not familiar with the device, with similar results in overall time of performance and the measurements of the femoral arteries. In the third and final study, experts from different continents were connected remotely to the examination site via an augmented reality device with good transmission quality. The remote supervision to doctors' examination produced a good interrater correlation. Experiences with the augmented reality-based setting were rated as highly positive by the participants. Potential benefits of this technique were seen in the fields of education, movement analysis, and supervision. Concluding, the findings of this thesis were able to suggest modern and addressee- centred digital solutions to enhance the understanding of given examinations techniques of potential investigators in exercise science research projects. Head-mounted augmented reality devices have a special value and may be recommended for collaborative research projects with physical examination-based research questions. While the established setting should be further investigated in prospective clinical studies, digital competencies of future researchers should already be enhanced during the early stages of their education.},
  language  = {en}
}
@phdthesis{Hantschmann2023,
  author    = {Hantschmann, Markus},
  title     = {Stimulated resonant inelastic X-ray scattering in transition metal systems},
  doi       = {10.25932/publishup-58476},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-584761},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xv, 160},
  year      = {2023},
  abstract  = {With the implementation of intense, short pulsed light sources throughout the last years, the powerful technique of resonant inelastic X-ray scattering (RIXS) became feasible for a wide range of experiments within femtosecond dynamics in correlated materials and molecules. In this thesis I investigate the potential to bring RIXS into the fluence regime of nonlinear X-ray-matter interactions, especially focusing on the impact of stimulated scattering on RIXS in transition metal systems in a transmission spectroscopy geometry around transition metal L-edges. After presenting the RIXS toolbox and the capabilities of free electron laser light sources for ultrafast intense X-ray experiments, the thesis explores an experiment designed to understand the impact of stimulated scattering on diffraction and direct beam transmission spectroscopy on a CoPd multilayer system. The experiments require short X-ray pulses that can only be generated at free electron lasers (FEL). Here the pulses are not only short, but also very intense, which opens the door to nonlinear X-ray-matter interactions. In the second part of this thesis, we investigate observations in the nonlinear interaction regime, look at potential difficulties for classic spectroscopy and investigate possibilities to enhance the RIXS through stimulated scattering. Here, a study on stimulated RIXS is presented, where we investigate the light field intensity dependent CoPd demagnetization in transmission as well as scattering geometry. Thereby we show the first direct observation of stimulated RIXS as well as light field induced nonlinear effects, namely the breakdown of scattering intensity and the increase in sample transmittance. The topic is of ongoing interest and will just increase in relevance as more free electron lasers are planned and the number of experiments at such light sources will continue to increase in the near future. Finally we present a discussion on the accessibility of small DOS shifts in the absorption-band of transition metal complexes through stimulated resonant X-ray scattering. As these shifts occur for example in surface states this finding could expand the experimental selectivity of NEXAFS and RIXS to the detectability of surface states. We show how stimulation can indeed enhance the visibility of DOS shifts through the detection of stimulated spectral shifts and enhancements in this theoretical study. We also forecast the observation of stimulated enhancements in resonant excitation experiments at FEL sources in systems with a high density of states just below the Fermi edge and in systems with an occupied to unoccupied DOS ratio in the valence band above 1.},
  language  = {en}
}
@phdthesis{Ewert2023,
  author    = {Ewert, Christina},
  title     = {The role of self-compassion in effective stress processing},
  doi       = {10.25932/publishup-60748},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-607486},
  school      = {Universit{\"a}t Potsdam},
  pages     = {193},
  year      = {2023},
  abstract  = {Background: The concept self-compassion (SC), a special way of being compassionate with oneself while dealing with stressful life circumstances, has attracted increasing attention in research over the past two decades. Research has already shown that SC has beneficial effects on affective well-being and other mental health outcomes. However, little is known in which ways SC might facilitate our affective well-being in stressful situations. Hence, a central concern of this dissertation was to focus on the question which underlying processes might influence the link between SC and affective well-being. Two established components in stress processing, which might also play an important role in this context, could be the amount of experienced stress and the way of coping with a stressor. Thus, using a multi-method approach, this dissertation aimed at finding to which extent SC might help to alleviate the experienced stress and promotes the use of more salutary coping, while dealing with stressful circumstances. These processes might ultimately help improve one's affective well-being. Derived from that, it was hypothesized that more SC is linked to less perceived stress and intensified use of salutary coping responses. Additionally, it was suggested that perceived stress and coping mediate the relation between SC and affective well-being. Method: The research questions were targeted in three single studies and one meta-study. To test my assumptions about the relations of SC and coping in particular, a systematic literature search was conducted resulting in k = 136 samples with an overall sample size of N = 38,913. To integrate the z-transformed Pearson correlation coefficients, random-effects models were calculated. All hypotheses were tested with a three-wave cross-lagged design in two short-term longitudinal online studies assessing SC, perceived stress and coping responses in all waves. The first study explored the assumptions in a student sample (N = 684) with a mean age of 27.91 years over a six-week period, whereas the measurements were implemented in the GESIS Panel (N = 2934) with a mean age of 52.76 years analyzing the hypotheses in a populationbased sample across eight weeks. Finally, an ambulatory assessment study was designed to expand the findings of the longitudinal studies to the intraindividual level. Thus, a sample of 213 participants completed questionnaires of momentary SC, perceived stress, engagement and disengagement coping, and affective well-being on their smartphones three times per day over seven consecutive days. The data was processed using 1-1-1 multilevel mediation analyses. Results: Results of the meta-analysis indicated that higher SC is significantly associated with more use of engagement coping and less use of disengagement coping. Considering the relations between SC and stress processing variables in all three single studies, cross-lagged paths from the longitudinal data, as well as multilevel modeling paths from the ambulatory assessment data indicated a notable relation between all relevant stress variables. As expected, results showed a significant negative relation between SC and perceived stress and disengagement coping, as well as a positive connection with engagement coping responses at the dispositional and intra-individual level. However, considering the mediational hypothesis, the most promising pathway in the link between SC and affective well-being turned out to be perceived stress in all three studies, while effects of the mediational pathways through coping responses were less robust. Conclusion: Thus, a more self-compassionate attitude and higher momentary SC, when needed in specific situations, can help to engage in effective stress processing. Considering the underlying mechanisms in the link between SC and affective well-being, stress perception in particular seemed to be the most promising candidate for enhancing affective well-being at the dispositional and at the intraindividual level. Future research should explore the pathways between SC and affective well-being in specific contexts and samples, and also take into account additional influential factors.},
  language  = {en}
}
@phdthesis{MendesFerreira2023,
  author    = {Mendes Ferreira, Clara},
  title     = {Indirect, tri-trophic effects of fear on biodiversity},
  doi       = {10.25932/publishup-61102},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-611020},
  school      = {Universit{\"a}t Potsdam},
  pages     = {119},
  year      = {2023},
  abstract  = {Predator-forager interactions are a major factor in evolutionary adaptation of many species, as predators need to gain energy by consuming prey species, and foragers needs to avoid the worst fate of mortality while still consuming resources for energetic gains. In this evolutionary arms race, the foragers have constantly evolved anti-predator behaviours (e.g. foraging activity changes). To describe all these complex changes, researchers developed the framework of the landscape of fear, that is, the spatio-temporal variation of perceived predation risk. This concept simplifies all the involved ecological processes into one framework, by integrating animal biology and distribution with habitat characteristics. Researchers can then evaluate the perception of predation risk in prey species, what are the behavioural responses of the prey and, therefore, understand the cascading effects of landscapes of fear at the resource levels (tri-trophic effects). Although tri-trophic effects are well studied at the predator-prey interaction level, little is known on how the forager-resource interactions are part of the overall cascading effects of landscapes of fear, despite the changes of forager feeding behaviour - that occur with perceived predation risk - affecting directly the level of the resources. This thesis aimed to evaluate the cascading effects of the landscape of fear on biodiversity of resources, and how the feeding behaviour and movement of foragers shaped the final resource species composition (potential coexistence mechanisms). We studied the changes caused by landscapes of fear on wild and captive rodent communities and evaluated: the cascading effects of different landscapes of fear on a tri-trophic system (I), the effects of fear on a forager's movement patterns and dietary preferences (II) and cascading effects of different types of predation risk (terrestrial versus avian, III). In Chapter I, we applied a novel measure to evaluate the cascading effects of fear at the level of resources, by quantifying the diversity of resources left after the foragers gave-up on foraging (diversity at the giving-up density). We tested the measure at different spatial levels (local and regional) and observed that with decreased perceived predation risk, the density and biodiversity of resources also decreased. Foragers left a very dissimilar community of resources based on perceived risk and resources functional traits, and therefore acted as an equalising mechanism. In Chapter II, we wanted to understand further the decision-making processes of rodents in different landscapes of fear, namely, in which resource species rodents decided to forage on (based on three functional traits: size, nutrients and shape) and how they moved depending on perceived predation risk. In safe landscapes, individuals increased their feeding activity and movements and despite the increased costs, they visited more often patches that were further away from their central-place. Despite a preference for the bigger resources regardless of risk, when perceived predation risk was low, individuals changed their preference to fat-rich resources. In Chapter III, we evaluated the cascading effects of two different types of predation risk in rodents: terrestrial (raccoon) versus avian predation risk. Raccoon presence or absence did not alter the rodents feeding behaviour in different landscapes of fear. Rodent's showed risk avoidance behaviours towards avian predators (spatial risk avoidance), but not towards raccoons (lack of temporal risk avoidance). By analysing the effects of fear in tri-trophic systems, we were able to deepen the knowledge of how non-consumptive effects of predators affect the behaviour of foragers, and quantitatively measure the cascading effects at the level of resources with a novel measure. Foragers are at the core of the ecological processes and responses to the landscape of fear, acting as variable coexistence agents for resource species depending on perceived predation risk. This newly found measures and knowledge can be applied to more trophic chains, and inform researchers on biodiversity patterns originating from landscapes of fear.},
  language  = {en}
}
@phdthesis{Magkos2023,
  author    = {Magkos, Sotirios},
  title     = {Iterative reconstruction from under-sampled Computed Tomography data},
  doi       = {10.25932/publishup-57278},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-572789},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xxii, 74},
  year      = {2023},
  abstract  = {In X-ray computed tomography (XCT), an X-ray beam of intensity I0 is transmitted through an object and its attenuated intensity I is measured when it exits the object. The attenuation of the beam depends on the attenuation coefficients along its path. The attenuation coefficients provide information about the structure and composition of the object and can be determined through mathematical operations that are referred to as reconstruction. The standard reconstruction algorithms are based on the filtered backprojection (FBP) of the measured data. While these algorithms are fast and relatively simple, they do not always succeed in computing a precise reconstruction, especially from under-sampled data. Alternatively, an image or volume can be reconstructed by solving a system of linear equations. Typically, the system of equations is too large to be solved but its solution can be approximated by iterative methods, such as the Simultaneous Iterative Reconstruction Technique (SIRT) and the Conjugate Gradient Least Squares (CGLS). This dissertation focuses on the development of a novel iterative algorithm, the Direct Iterative Reconstruction of Computed Tomography Trajectories (DIRECTT). After its reconstruction principle is explained, its performance is assessed for real parallel- and cone-beam CT (including under-sampled) data and compared to that of other established algorithms. Finally, it is demonstrated how the shape of the measured object can be modelled into DIRECTT to achieve even better reconstruction results.},
  language  = {en}
}
@phdthesis{BysaniKondagari2023,
  author    = {Bysani Kondagari, Viswanada Reddy},
  title     = {Engineering and evolution of saccharomyces cerevisiae for synthetic formatotrophic growth via the reductive glycine pathway},
  doi       = {10.25932/publishup-58222},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-582222},
  school      = {Universit{\"a}t Potsdam},
  pages     = {124},
  year      = {2023},
  abstract  = {Increasing demand for food, healthcare, and transportation arising from the growing world population is accompanied by and driving global warming challenges due to the rise of the atmospheric CO2 concentration. Industrialization for human needs has been increasingly releasing CO2 into the atmosphere for the last century or more. In recent years, the possibility of recycling CO2 to stabilize the atmospheric CO2 concentration and combat rising temperatures has gained attention. Thus, using CO2 as the feedstock to address future world demands is the ultimate solution while controlling the rapid climate change. Valorizing CO2 to produce activated and stable one-carbon feedstocks like formate and methanol and further upgrading them to industrial microbial processes to replace unsustainable feedstocks would be crucial for a future biobased circular economy. However, not all microbes can grow on formate as a feedstock, and those microbes that can grow are not well established for industrial processes. S. cerevisiae is one of the industrially well-established microbes, and it is a significant contributor to bioprocess industries. However, it cannot grow on formate as a sole carbon and energy source. Thus, engineering S. cerevisiae to grow on formate could potentially pave the way to sustainable biomass and value-added chemicals production. The Reductive Glycine Pathway (RGP), designed as the aerobic twin of the anaerobic Reductive Acetyl-CoA pathway, is an efficient formate and CO2 assimilation pathway. The RGP comprises of the glycine synthesis module (Mis1p, Gcv1p, Gcv2p, Gcv3p, and Lpd1p), the glycine to serine conversion module (Shmtp), the pyruvate synthesis module (Cha1p), and the energy supply module (Fdh1p). The RGP requires formate and elevated CO2 levels to operate the glycine synthesis module. In this study, I established the RGP in the yeast system using growth-coupled selection strategies to achieve formate and CO2-dependent biomass formation in aerobic conditions. Firstly, I constructed serine biosensor strains by disrupting the native serine and glycine biosynthesis routes in the prototrophic S288c and FL100 yeast strains and insulated serine, glycine, and one-carbon metabolism from the central metabolic network. These strains cannot grow on glucose as the sole carbon source but require the supply of serine or glycine to complement the engineered auxotrophies. Using growth as a readout, I employed these strains as selection hosts to establish the RGP. Initially, to achieve this, I engineered different serine-hydroxymethyltransferases in the genome of serine biosensor strains for efficient glycine to serine conversion. Then, I implemented the glycine synthesis module of the RGP in these strains for the glycine and serine synthesis from formate and CO2. I successfully conducted Adaptive Laboratory Evolution (ALE) using these strains, which yielded a strain capable of glycine and serine biosynthesis from formate and CO2. Significant growth improvements from 0.0041 h-1 to 0.03695 h-1 were observed during ALE. To validate glycine and serine synthesis, I conducted carbon tracing experiments with 13C formate and 13CO2, confirming that more than 90\% of glycine and serine biosynthesis in the evolved strains occurs via the RGP. Interestingly, labeling data also revealed that 10-15\% of alanine was labelled, indicating pyruvate synthesis from the formate-derived serine using native serine deaminase (Cha1p) activity. Thus, RGP contributes to a small pyruvate pool which is converted to alanine without any selection pressure for pyruvate synthesis from formate. Hence, this data confirms the activity of all three modules of RGP even in the presence of glucose. Further, ALE in glucose limiting conditions did not improve pyruvate flux via the RGP. Growth characterization of these strains showed that the best growth rates were achieved in formate concentrations between 25 mM to 300 mM. Optimum growth required 5\% CO2, and dropped when the CO2 concentration was reduced from 5\% to 2.5\%. Whole-genome sequencing of these evolved strains revealed mutations in genes that encode Gdh1p, Pet9p, and Idh1p. These enzymes might influence intracellular NADPH, ATP, and NADH levels, indicating adjustment to meet the energy demand of the RGP. I reverse-engineered the GDH1 truncation mutation on unevolved serine biosensor strains and reproduced formate dependent growth. To elucidate the effect of the GDH1 mutation on formate assimilation, I reintroduced this mutation in the S288c strain and conducted carbon-tracing experiments to compared formate assimilation between WT and ∆gdh1 mutant strains. Comparatively, enhanced formate assimilation was recorded in the ∆gdh1 mutant strain. Although the 13C carbon tracing experiments confirmed the activity of all three modules of the RGP, the overall pyruvate flux via the RGP might be limited by the supply of reducing power. Hence, in a different approach, I overexpressed the formate dehydrogenase (Fdh1p) for energy supply and serine deaminase (Cha1p) for active pyruvate synthesis in the S288c parental strain and established growth on formate and serine without glucose in the medium. Further reengineering and evolution of this strain with a consistent energy, and formate-derived serine supply for pyruvate synthesis, is essential to achieve complete formatotrophic growth in the yeast system.},
  language  = {en}
}
@phdthesis{Luna2023,
  author    = {Luna, Lisa Victoria},
  title     = {Rainfall-triggered landslides: conditions, prediction, and warning},
  doi       = {10.25932/publishup-60092},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-600927},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xix, 119},
  year      = {2023},
  abstract  = {Rainfall-triggered landslides are a globally occurring hazard that cause several thousand fatalities per year on average and lead to economic damages by destroying buildings and infrastructure and blocking transportation networks. For people living and governing in susceptible areas, knowing not only where, but also when landslides are most probable is key to inform strategies to reduce risk, requiring reliable assessments of weather-related landslide hazard and adequate warning. Taking proper action during high hazard periods, such as moving to higher levels of houses, closing roads and rail networks, and evacuating neighborhoods, can save lives. Nevertheless, many regions of the world with high landslide risk currently lack dedicated, operational landslide early warning systems. The mounting availability of temporal landslide inventory data in some regions has increasingly enabled data-driven approaches to estimate landslide hazard on the basis of rainfall conditions. In other areas, however, such data remains scarce, calling for appropriate statistical methods to estimate hazard with limited data. The overarching motivation for this dissertation is to further our ability to predict rainfall-triggered landslides in time in order to expand and improve warning. To this end, I applied Bayesian inference to probabilistically quantify and predict landslide activity as a function of rainfall conditions at spatial scales ranging from a small coastal town, to metropolitan areas worldwide, to a multi-state region, and temporal scales from hourly to seasonal. This thesis is composed of three studies. In the first study, I contributed to developing and validating statistical models for an online landslide warning dashboard for the small town of Sitka, Alaska, USA. We used logistic and Poisson regressions to estimate daily landslide probability and counts from an inventory of only five reported landslide events and 18 years of hourly precipitation measurements at the Sitka airport. Drawing on community input, we established two warning thresholds for implementation in the dashboard, which uses observed rainfall and US National Weather Service forecasts to provide real-time estimates of landslide hazard. In the second study, I estimated rainfall intensity-duration thresholds for shallow landsliding for 26 cities worldwide and a global threshold for urban landslides. I found that landslides in urban areas occurred at rainfall intensities that were lower than previously reported global thresholds, and that 31\% of urban landslides were triggered during moderate rainfall events. However, landslides in cities with widely varying climates and topographies were triggered above similar critical rainfall intensities: thresholds for 77\% of cities were indistinguishable from the global threshold, suggesting that urbanization may harmonize thresholds between cities, overprinting natural variability. I provide a baseline threshold that could be considered for warning in cities with limited landslide inventory data. In the third study, I investigated seasonal landslide response to annual precipitation patterns in the Pacific Northwest region, USA by using Bayesian multi-level models to combine data from five heterogeneous landslide inventories that cover different areas and time periods. I quantitatively confirmed a distinctly seasonal pattern of landsliding and found that peak landslide activity lags the annual precipitation peak. In February, at the height of the landslide season, landslide intensity for a given amount of monthly rainfall is up to ten times higher than at the season onset in November, underlining the importance of antecedent seasonal hillslope conditions. Together, these studies contributed actionable, objective information for landslide early warning and examples for the application of Bayesian methods to probabilistically quantify landslide hazard from inventory and rainfall data.},
  language  = {en}
}
@masterthesis{Repp2023,
  type      = {Bachelor Thesis},
  author    = {Repp, Leo},
  title     = {Extending the automatic theorem prover nanoCoP with arithmetic procedures},
  doi       = {10.25932/publishup-57619},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-576195},
  school      = {Universit{\"a}t Potsdam},
  pages     = {52},
  year      = {2023},
  abstract  = {In dieser Bachelorarbeit implementiere ich den automatischen Theorembeweiser nanoCoP-Ω. Es handelt sich bei diesem neuen System um das Ergebnis einer Portierung von Arithmetik-behandelnden Prozeduren aus dem automatischen Theorembeweiser mit Arithmetik leanCoP-Ω in das System nanoCoP 2.0. Dazu wird zuerst der mathematische Hintergrund zu automatischen Theorembeweisern und Arithmetik gegeben. Ich stelle die Vorg{\"a}ngerprojekte leanCoP, nanoCoP und leanCoP-Ω vor, auf dessen Vorlage nanoCoP-Ω entwickelt wurde. Es folgt eine ausf{\"u}hrliche Erkl{\"a}rung der Konzepte, um welche der nicht-klausale Konnektionskalk{\"u}l erweitert werden muss, um eine Behandlung von arithmetischen Ausdr{\"u}cken und Gleichheiten in den Kalk{\"u}l zu integrieren, sowie eine Beschreibung der Implementierung dieser Konzepte in nanoCoP-Ω. Als letztes folgt eine experimentelle Evaluation von nanoCoP-Ω. Es wurde ein ausf{\"u}hrlicher Vergleich von Laufzeit und Anzahl gel{\"o}ster Probleme im Vergleich zum {\"a}hnlich aufgebauten Theorembeweiser leanCoP-Ω auf Basis der TPTP-Benchmark durchgef{\"u}hrt. Ich komme zu dem Ergebnis, dass nanoCoP-Ω deutlich schneller ist als leanCoP-Ω ist, jedoch weniger gut geeignet f{\"u}r gr{\"o}ßere Probleme. Zudem konnte ich feststellen, dass nanoCoP-Ω falsche Beweise liefern kann. Ich bespreche, wie dieses Problem gel{\"o}st werden kann, sowie einige m{\"o}gliche Optimierungen und Erweiterungen des Beweissystems.},
  language  = {en}
}
@phdthesis{Quinzan2023,
  author    = {Quinzan, Francesco},
  title     = {Combinatorial problems and scalability in artificial intelligence},
  doi       = {10.25932/publishup-61111},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-611114},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xi, 141},
  year      = {2023},
  abstract  = {Modern datasets often exhibit diverse, feature-rich, unstructured data, and they are massive in size. This is the case of social networks, human genome, and e-commerce databases. As Artificial Intelligence (AI) systems are increasingly used to detect pattern in data and predict future outcome, there are growing concerns on their ability to process large amounts of data. Motivated by these concerns, we study the problem of designing AI systems that are scalable to very large and heterogeneous data-sets. Many AI systems require to solve combinatorial optimization problems in their course of action. These optimization problems are typically NP-hard, and they may exhibit additional side constraints. However, the underlying objective functions often exhibit additional properties. These properties can be exploited to design suitable optimization algorithms. One of these properties is the well-studied notion of submodularity, which captures diminishing returns. Submodularity is often found in real-world applications. Furthermore, many relevant applications exhibit generalizations of this property. In this thesis, we propose new scalable optimization algorithms for combinatorial problems with diminishing returns. Specifically, we focus on three problems, the Maximum Entropy Sampling problem, Video Summarization, and Feature Selection. For each problem, we propose new algorithms that work at scale. These algorithms are based on a variety of techniques, such as forward step-wise selection and adaptive sampling. Our proposed algorithms yield strong approximation guarantees, and the perform well experimentally. We first study the Maximum Entropy Sampling problem. This problem consists of selecting a subset of random variables from a larger set, that maximize the entropy. By using diminishing return properties, we develop a simple forward step-wise selection optimization algorithm for this problem. Then, we study the problem of selecting a subset of frames, that represent a given video. Again, this problem corresponds to a submodular maximization problem. We provide a new adaptive sampling algorithm for this problem, suitable to handle the complex side constraints imposed by the application. We conclude by studying Feature Selection. In this case, the underlying objective functions generalize the notion of submodularity. We provide a new adaptive sequencing algorithm for this problem, based on the Orthogonal Matching Pursuit paradigm. Overall, we study practically relevant combinatorial problems, and we propose new algorithms to solve them. We demonstrate that these algorithms are suitable to handle massive datasets. However, our analysis is not problem-specific, and our results can be applied to other domains, if diminishing return properties hold. We hope that the flexibility of our framework inspires further research into scalability in AI.},
  language  = {en}
}
@misc{Paetzel2023,
  type      = {Master Thesis},
  author    = {P{\"a}tzel, Jonas},
  title     = {Seismic site characterization using broadband and DAS ambient vibration measurements on Mt Etna, Italy},
  doi       = {10.25932/publishup-61379},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-613793},
  school      = {Universit{\"a}t Potsdam},
  pages     = {95},
  year      = {2023},
  abstract  = {Both horizontal-to-vertical (H/V) spectral ratios and the spatial autocorrelation method (SPAC) have proven to be valuable tools to gain insight into local site effects by ambient noise measurements. Here, the two methods are employed to assess the subsurface velocity structure at the Piano delle Concazze area on Mt Etna. Volcanic tremor records from an array of 26 broadband seismometers is processed and a strong variability of H/V ratios during periods of increased volcanic activity is found. From the spatial distribution of H/V peak frequencies, a geologic structure in the north-east of Piano delle Concazze is imaged which is interpreted as the Ellittico caldera rim. The method is extended to include both velocity data from the broadband stations and distributed acoustic sensing data from a co-located 1.5 km long fibre optic cable. High maximum amplitude values of the resulting ratios along the trajectory of the cable coincide with known faults. The outcome also indicates previously unmapped parts of a fault. The geologic interpretation is in good agreement with inversion results from magnetic survey data. Using the neighborhood algorithm, spatial autocorrelation curves obtained from the modified SPAC are inverted alone and jointly with the H/V peak frequencies for 1D shear wave velocity profiles. The obtained models are largely consistent with published models and were able to validate the results from the fibre optic cable.},
  language  = {en}
}
@phdthesis{Yadav2023,
  author    = {Yadav, Himanshu},
  title     = {A computational evaluation of feature distortion and cue weighting in sentence comprehension},
  doi       = {10.25932/publishup-58505},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-585055},
  school      = {Universit{\"a}t Potsdam},
  pages     = {iv, 115},
  year      = {2023},
  abstract  = {Successful sentence comprehension requires the comprehender to correctly figure out who did what to whom. For example, in the sentence John kicked the ball, the comprehender has to figure out who did the action of kicking and what was being kicked. This process of identifying and connecting the syntactically-related words in a sentence is called dependency completion. What are the cognitive constraints that determine dependency completion? A widely-accepted theory is cue-based retrieval. The theory maintains that dependency completion is driven by a content-addressable search for the co-dependents in memory. The cue-based retrieval explains a wide range of empirical data from several constructions including subject-verb agreement, subject-verb non-agreement, plausibility mismatch configurations, and negative polarity items. However, there are two major empirical challenges to the theory: (i) Grammatical sentences' data from subject-verb number agreement dependencies, where the theory predicts a slowdown at the verb in sentences like the key to the cabinet was rusty compared to the key to the cabinets was rusty, but the data are inconsistent with this prediction; and, (ii) Data from antecedent-reflexive dependencies, where a facilitation in reading times is predicted at the reflexive in the bodybuilder who worked with the trainers injured themselves vs. the bodybuilder who worked with the trainer injured themselves, but the data do not show a facilitatory effect. The work presented in this dissertation is dedicated to building a more general theory of dependency completion that can account for the above two datasets without losing the original empirical coverage of the cue-based retrieval assumption. In two journal articles, I present computational modeling work that addresses the above two empirical challenges. To explain the grammatical sentences' data from subject-verb number agreement dependencies, I propose a new model that assumes that the cue-based retrieval operates on a probabilistically distorted representation of nouns in memory (Article I). This hybrid distortion-plus-retrieval model was compared against the existing candidate models using data from 17 studies on subject-verb number agreement in 4 languages. I find that the hybrid model outperforms the existing models of number agreement processing suggesting that the cue-based retrieval theory must incorporate a feature distortion assumption. To account for the absence of facilitatory effect in antecedent-reflexive dependen� cies, I propose an individual difference model, which was built within the cue-based retrieval framework (Article II). The model assumes that individuals may differ in how strongly they weigh a syntactic cue over a number cue. The model was fitted to data from two studies on antecedent-reflexive dependencies, and the participant-level cue-weighting was estimated. We find that one-fourth of the participants, in both studies, weigh the syntactic cue higher than the number cue in processing reflexive dependencies and the remaining participants weigh the two cues equally. The result indicates that the absence of predicted facilitatory effect at the level of grouped data is driven by some, not all, participants who weigh syntactic cues higher than the number cue. More generally, the result demonstrates that the assumption of differential cue weighting is important for a theory of dependency completion processes. This differential cue weighting idea was independently supported by a modeling study on subject-verb non-agreement dependencies (Article III). Overall, the cue-based retrieval, which is a general theory of dependency completion, needs to incorporate two new assumptions: (i) the nouns stored in memory can undergo probabilistic feature distortion, and (ii) the linguistic cues used for retrieval can be weighted differentially. This is the cumulative result of the modeling work presented in this dissertation. The dissertation makes an important theoretical contribution: Sentence comprehension in humans is driven by a mechanism that assumes cue-based retrieval, probabilistic feature distortion, and differential cue weighting. This insight is theoretically important because there is some independent support for these three assumptions in sentence processing and the broader memory literature. The modeling work presented here is also methodologically important because for the first time, it demonstrates (i) how the complex models of sentence processing can be evaluated using data from multiple studies simultaneously, without oversimplifying the models, and (ii) how the inferences drawn from the individual-level behavior can be used in theory development.},
  language  = {en}
}
@phdthesis{Mantiloni2023,
  author    = {Mantiloni, Lorenzo},
  title     = {Modeling stress and dike pathways in calerdas},
  doi       = {10.25932/publishup-61262},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-612621},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xii, 145},
  year      = {2023},
  abstract  = {Volcanic hazard assessment relies on physics-based models of hazards, such as lava flows and pyroclastic density currents, whose outcomes are very sensitive to the location where future eruptions will occur. On the contrary, forecast of vent opening locations in volcanic areas typically relies on purely data-driven approaches, where the spatial density of past eruptive vents informs the probability maps of future vent opening. Such techniques may be suboptimal in volcanic systems with missing or scarce data, and where the controls on magma pathways may change over time. An alternative approach was recently proposed, relying on a model of stress-driven pathways of magmatic dikes. In that approach, the crustal stress was optimized so that dike trajectories linked consistently the location of the magma chamber to that of past vents. The retrieved information on the stress state was then used to forecast future dike trajectories. The validation of such an approach requires extensive application to nature. Before doing so, however, several important limitations need to be removed, most importantly the two-dimensional (2D) character of the models and theoretical concepts. In this thesis, I develop methods and tools so that a physics-based strategy of stress inversion and eruptive vent forecast in volcanoes can be applied to three dimensional (3D) problems. In the first part, I test the stress inversion and vent forecast strategy on analog models, still within a 2D framework, but improving on the efficiency of the stress optimization. In the second part, I discuss how to correctly account for gravitational loading/unloading due to complex 3D topography with a Boundary-Element numerical model. Then, I develop a new, simplified but fast model of dike pathways in 3D, designed for running large numbers of simulations at minimal computational cost, and able to backtrack dike trajectories from vents on the surface. Finally, I combine the stress and dike models to simulate dike pathways in synthetic calderas. In the third part, I describe a framework of stress inversion and vent forecast strategy in 3D for calderas. The stress inversion relies on, first, describing the magma storage below a caldera in terms of a probability density function. Next, dike trajectories are backtracked from the known locations of past vents down through the crust, and the optimization algorithm seeks for the stress models which lead trajectories through the regions of highest probability. I apply the new strategy to the synthetic scenarios presented in the second part, and I exploit the results from the stress inversions to produce probability maps of future vent locations for some of those scenarios. In the fourth part, I present the inversion of different deformation source models applied to the ongoing ground deformation observed across the Rhenish Massif in Central Europe. The region includes the Eifel Volcanic Fields in Germany, a potential application case for the vent forecast strategy. The results show how the observed deformation may be due to melt accumulation in sub-horizontal structures in the lower crust or upper mantle. The thesis concludes with a discussion of the stress inversion and vent forecast strategy, its limitations and applicability to real volcanoes. Potential developments of the modeling tools and concepts presented here are also discussed, as well as possible applications to other geophysical problems.},
  language  = {en}
}
@phdthesis{Wittek2023,
  author    = {Wittek, Laura},
  title     = {Comparison of metabolic cages - analysis of refinement measures on the welfare and metabolic parameters of laboratory mice},
  doi       = {10.25932/publishup-61120},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-611208},
  school      = {Universit{\"a}t Potsdam},
  pages     = {IV, 160},
  year      = {2023},
  abstract  = {Housing in metabolic cages can induce a pronounced stress response. Metabolic cage systems imply housing mice on metal wire mesh for the collection of urine and feces in addition to monitoring food and water intake. Moreover, mice are single-housed, and no nesting, bedding, or enrichment material is provided, which is often argued to have a not negligible impact on animal welfare due to cold stress. We therefore attempted to reduce stress during metabolic cage housing for mice by comparing an innovative metabolic cage (IMC) with a commercially available metabolic cage from Tecniplast GmbH (TMC) and a control cage. Substantial refinement measures were incorporated into the IMC cage design. In the frame of a multifactorial approach for severity assessment, parameters such as body weight, body composition, food intake, cage and body surface temperature (thermal imaging), mRNA expression of uncoupling protein 1 (Ucp1) in brown adipose tissue (BAT), fur score, and fecal corticosterone metabolites (CMs) were included. Female and male C57BL/6J mice were single-housed for 24 h in either conventional Macrolon cages (control), IMC, or TMC for two sessions. Body weight decreased less in the IMC (females—1st restraint: 6.94\%; 2nd restraint: 6.89\%; males—1st restraint: 8.08\%; 2nd restraint: 5.82\%) compared to the TMC (females—1st restraint: 13.2\%; 2nd restraint: 15.0\%; males—1st restraint: 13.1\%; 2nd restraint: 14.9\%) and the IMC possessed a higher cage temperature (females—1st restraint: 23.7°C; 2nd restraint: 23.5 °C; males—1st restraint: 23.3 °C; 2nd restraint: 23.5 °C) compared with the TMC (females—1st restraint: 22.4 °C; 2nd restraint: 22.5 °C; males—1st restraint: 22.6 °C; 2nd restraint: 22.4 °C). The concentration of fecal corticosterone metabolites in the TMC (females—1st restraint: 1376 ng/g dry weight (DW); 2nd restraint: 2098 ng/g DW; males—1st restraint: 1030 ng/g DW; 2nd restraint: 1163 ng/g DW) was higher compared to control cage housing (females—1st restraint: 640 ng/g DW; 2nd restraint: 941 ng/g DW; males—1st restraint: 504 ng/g DW; 2nd restraint: 537 ng/g DW). Our results show the stress potential induced by metabolic cage restraint that is markedly influenced by the lower housing temperature. The IMC represents a first attempt to target cold stress reduction during metabolic cage application thereby producing more animal welfare friendly data.},
  language  = {en}
}
@misc{HeisselSanchezPietreketal.2023,
  author    = {Heissel, Andreas and Sanchez, Alba and Pietrek, Anou F. and Bergau, Theresa and Stielow, Christiane and Rapp, Michael Armin and Van der Kaap-Deeder, Jolene},
  title     = {Validating the German Short Basic Psychological Need Satisfaction and Frustration Scale in Individuals with Depression},
  series = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Humanwissenschaftliche Reihe},
  journal   = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Humanwissenschaftliche Reihe},
  number    = {837},
  issn      = {1866-8364},
  doi       = {10.25932/publishup-58906},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-589060},
  pages     = {18},
  year      = {2023},
  abstract  = {Satisfaction and frustration of the needs for autonomy, competence, and relatedness, as assessed with the 24-item Basic Psychological Need Satisfaction and Frustration Scale (BPNSFS), have been found to be crucial indicators of individuals' psychological health. To increase the usability of this scale within a clinical and health services research context, we aimed to validate a German short version (12 items) of this scale in individuals with depression including the examination of the relations from need frustration and need satisfaction to ill-being and quality of life (QOL). This cross-sectional study involved 344 adults diagnosed with depression (Mage (SD) = 47.5 years (11.1); 71.8\% females). Confirmatory factor analyses indicated that the short version of the BPNSFS was not only reliable, but also fitted a six-factor structure (i.e., satisfaction/frustration X type of need). Subsequent structural equation modeling showed that need frustration related positively to indicators of ill-being and negatively to QOL. Surprisingly, need satisfaction did not predict differences in ill-being or QOL. The short form of the BPNSFS represents a practical instrument to measure need satisfaction and frustration in people with depression. Further, the results support recent evidence on the importance of especially need frustration in the prediction of psychopathology.},
  language  = {en}
}
@phdthesis{Haseeb2023,
  author    = {Haseeb, Haider},
  title     = {Charge and heat transport across interfaces in nanostructured porous silicon},
  doi       = {10.25932/publishup-61122},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-611224},
  school      = {Universit{\"a}t Potsdam},
  pages     = {84},
  year      = {2023},
  abstract  = {This thesis discusses heat and charge transport phenomena in single-crystalline Silicon penetrated by nanometer-sized pores, known as mesoporous Silicon (pSi). Despite the extensive attention given to it as a thermoelectric material of interest, studies on microscopic thermal and electronic transport beyond its macroscopic characterizations are rarely reported. In contrast, this work reports the interplay of both. PSi samples synthesized by electrochemical anodization display a temperature dependence of specific heat 𝐶𝑝 that deviates from the characteristic 𝑇^3 behaviour (at 𝑇<50𝐾). A thorough analysis reveals that both 3D and 2D Einstein and Debye modes contribute to this specific heat. Additional 2D Einstein modes (~3 𝑚𝑒𝑉) agree reasonably well with the boson peak of SiO2 in pSi pore walls. 2D Debye modes are proposed to account for surface acoustic modes causing a significant deviation from the well-known 𝑇^3 dependence of 𝐶𝑝 at 𝑇<50𝐾. A novel theoretical model gives insights into the thermal conductivity of pSi in terms of porosity and phonon scattering on the nanoscale. The thermal conductivity analysis utilizes the peculiarities of the pSi phonon dispersion probed by the inelastic neutron scattering experiments. A phonon mean-free path of around 10 𝑛𝑚 extracted from the presented model is proposed to cause the reduced thermal conductivity of pSi by two orders of magnitude compared to p-doped bulk Silicon. Detailed analysis indicates that compound averaging may cause a further 10-50\% reduction. The percolation threshold of 65\% for thermal conductivity of pSi samples is subsequently determined by employing theoretical effective medium models. Temperature-dependent electrical conductivity measurements reveal a thermally activated transport process. A detailed analysis of the activation energy 𝐸𝐴𝜎 in the thermally activated transport exhibits a Meyer Neldel compensation rule between different samples that originates in multi-phonon absorption upon carrier transport. Activation energies 𝐸𝐴𝑆 obtained from temperature-dependent thermopower measurements provide further evidence for multi-phonon assisted hopping between localized states as a dominant charge transport mechanism in pSi, as they systematically differ from the determined 𝐸𝐴𝜎 values.},
  language  = {en}
}
@phdthesis{GohlGreenaway2023,
  author    = {Gohl-Greenaway, Niklas},
  title     = {Essays in public economics},
  doi       = {10.25932/publishup-60902},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-609026},
  school      = {Universit{\"a}t Potsdam},
  pages     = {10, 291},
  year      = {2023},
  abstract  = {This cumulative dissertation uses economic theory and micro-econometric tools and evaluation methods to analyse public policies and their impact on welfare and individual behaviour. In particular, it focuses on policies in two distinct areas that represent fundamental societal challenges in the 21st century: the ageing of society and life in densely-populated urban agglomerations. Together, these areas shape important financial decisions in a person's life, impact welfare, and are driving forces behind many of the challenges in today's societies. The five self-contained research chapters of this thesis analyse the forward looking effects of pension reforms, affordable housing policies as well as a public transport subsidy and its effect on air pollution.},
  language  = {en}
}
@phdthesis{Voroshnin2023,
  author    = {Voroshnin, Vladimir},
  title     = {Control over spin and electronic structure of MoS₂ monolayer via interactions with substrates},
  doi       = {10.25932/publishup-59070},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-590709},
  school      = {Universit{\"a}t Potsdam},
  pages     = {viii, 125},
  year      = {2023},
  abstract  = {The molybdenum disulfide (MoS2) monolayer is a semiconductor with a direct bandgap while it is a robust and affordable material. It is a candidate for applications in optoelectronics and field-effect transistors. MoS2 features a strong spin-orbit coupling which makes its spin structure promising for acquiring the Kane-Mele topological concept with corresponding applications in spintronics and valleytronics. From the optical point of view, the MoS2 monolayer features two valleys in the regions of K and K' points. These valleys are differentiated by opposite spins and a related valley-selective circular dichroism. In this study we aim to manipulate the MoS2 monolayer spin structure in the vicinity of the K and K' points to explore the possibility of getting control over the optical and electronic properties. We focus on two different substrates to demonstrate two distinct routes: a gold substrate to introduce a Rashba effect and a graphene/cobalt substrate to introduce a magnetic proximity effect in MoS2. The Rashba effect is proportional to the out-of-plane projection of the electric field gradient. Such a strong change of the electric field occurs at the surfaces of a high atomic number materials and effectively influence conduction electrons as an in-plane magnetic field. A molybdenum and a sulfur are relatively light atoms, thus, similar to many other 2D materials, intrinsic Rashba effect in MoS2 monolayer is vanishing small. However, proximity of a high atomic number substrate may enhance Rashba effect in a 2D material as it was demonstrated for graphene previously. Another way to modify the spin structure is to apply an external magnetic field of high magnitude (several Tesla), and cause a Zeeman splitting, the conduction electrons. However, a similar effect can be reached via magnetic proximity which allows us to reduce external magnetic fields significantly or even to zero. The graphene on cobalt interface is ferromagnetic and stable for MoS2 monolayer synthesis. Cobalt is not the strongest magnet; therefore, stronger magnets may lead to more significant results. Nowadays most experimental studies on the dichalcogenides (MoS2 included) are performed on encapsulated heterostructures that are produced by mechanical exfoliation. While mechanical exfoliation (or scotch-tape method) allows to produce a huge variety of structures, the shape and the size of the samples as well as distance between layers in heterostructures are impossible to control reproducibly. In our study we used molecular beam epitaxy (MBE) methods to synthesise both MoS2/Au(111) and MoS2/graphene/Co systems. We chose to use MBE, as it is a scalable and reproducible approach, so later industry may adapt it and take over. We used graphene/cobalt instead of just a cobalt substrate because direct contact of MoS2\ monolayer and a metallic substrate may lead to photoluminescence (PL) quenching in the metallic substrate. Graphene and hexagonal boron nitride monolayer are considered building blocks of a new generation of electronics also commonly used as encapsulating materials for PL studies. Moreover graphene is proved to be a suitable substrate for the MBE growth of transitional metal dichalcogenides (TMDCs). In chapter 1, we start with an introduction to TMDCs. Then we focus on MoS2 monolayer state of the art research in the fields of application scenario; synthesis approaches; electronic, spin, and optical properties; and interactions with magnetic fields and magnetic materials. We briefly touch the basics of magnetism in solids and move on to discuss various magnetic exchange interactions and magnetic proximity effect. Then we describe MoS2 optical properties in more detail. We start from basic exciton physics and its manifestation in the MoS2 monolayer. We consider optical selection rules in the MoS2 monolayer and such properties as chirality, spin-valley locking, and coexistence of bright and dark excitons. Chapter 2 contains an overview of the employed surface science methods: angle-integrated, angle-resolved, and spin-resolved photoemission; low energy electron diffraction and scanning tunneling microscopy. In chapter 3, we describe MoS2 monolayer synthesis details for two substrates: gold monocrystal with (111) surface and graphene on cobalt thin film with Co(111) surface orientation. The synthesis descriptions are followed by a detailed characterisation of the obtained structures: fingerprints of MoS2 monolayer formation; MoS2 monolayer symmetry and its relation to the substrate below; characterisation of MoS2 monolayer coverage, domain distribution, sizes and shapes, and moire structures. In chapter~4, we start our discussion with MoS2/Au(111) electronic and spin structure. Combining density functional theory computations (DFT) and spin-resolved photoemission studies, we demonstrate that the MoS2 monolayer band structure features an in-plane Rashba spin splitting. This confirms the possibility of MoS2 monolayer spin structure manipulation via a substrate. Then we investigate the influence of a magnetic proximity in the MoS2/graphene/Co system on the MoS2 monolayer spin structure. We focus our investigation on MoS2 high symmetry points: G and K. First, using spin-resolved measurements, we confirm that electronic states are spin-split at the G point via a magnetic proximity effect. Second, combining spin-resolved measurements and DFT computations for MoS2 monolayer in the K point region, we demonstrate the appearance of a small in-plane spin polarisation in the valence band top and predict a full in-plane spin polarisation for the conduction band bottom. We move forward discussing how these findings are related to the MoS2 monolayer optical properties, in particular the possibility of dark exciton observation. Additionally, we speculate on the control of the MoS2 valley energy via magnetic proximity from cobalt. As graphene is spatially buffering the MoS2 monolayer from the Co thin film, we speculate on the role of graphene in the magnetic proximity transfer by replacing graphene with vacuum and other 2D materials in our computations. We finish our discussion by investigating the K-doped MoS2/graphene/Co system and the influence of this doping on the electronic and spin structure as well as on the magnetic proximity effect. In summary, using a scalable MBE approach we synthesised MoS2/Au(111) and MoS2/graphene/Co systems. We found a Rashba effect taking place in MoS2/Au(111) which proves that the MoS2 monolayer in-plane spin structure can be modified. In MoS2/graphene/Co the in-plane magnetic proximity effect indeed takes place which rises the possibility of fine tuning the MoS2 optical properties via manipulation of the the substrate magnetisation.},
  language  = {en}
}
@phdthesis{Kudriavtseva2023,
  author    = {Kudriavtseva, Anna},
  title     = {Interactions between tectonics, climate, and surface processes in the Kyrgyz Tian Shan},
  doi       = {10.25932/publishup-60372},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-603728},
  school      = {Universit{\"a}t Potsdam},
  pages     = {XV, 164},
  year      = {2023},
  abstract  = {During the Cenozoic, global cooling and uplift of the Tian Shan, Pamir, and Tibetan plateau modified atmospheric circulation and reduced moisture supply to Central Asia. These changes led to aridification in the region during the Neogene. Afterwards, Quaternary glaciations led to modification of the landscape and runoff. In the Issyk-Kul basin of the Kyrgyz Tian Shan, the sedimentary sequences reflect the development of the adjacent ranges and local climatic conditions. In this work, I reconstruct the late Miocene - early Pleistocene depositional environment, climate, and lake development in the Issyk-Kul basin using facies analyses and stable δ18O and δ13C isotopic records from sedimentary sections dated by magnetostratigraphy and 26Al/10Be isochron burial dating. Also, I present 10Be-derived millennial-scale modern and paleo-denudation rates from across the Kyrgyz Tian Shan and long-term exhumation rates calculated from published thermochronology data. This allows me to examine spatial and temporal changes in surface processes in the Kyrgyz Tian Shan. In the Issyk-Kul basin, the style of fluvial deposition changed at ca. 7 Ma, and aridification in the basin commenced concurrently, as shown by magnetostratigraphy and the δ18O and δ13C data. Lake formation commenced on the southern side of the basin at ca. 5 Ma, followed by a ca. 2 Ma local depositional hiatus. 26Al/10Be isochron burial dating and paleocurrent analysis show that the Kungey range to the north of the basin grew eastward, leading to a change from fluvial-alluvial deposits to proximal alluvial fan conglomerates at 5-4 Ma in the easternmost part of the basin. This transition occurred at 2.6-2.8 Ma on the southern side of the basin, synchronously with the intensification of the Northern Hemisphere glaciation. The paleo-denudation rates from 2.7-2.0 Ma are as low as long-term exhumation rates, and only the millennial-scale denudation rates record an acceleration of denudation. This work concludes that the growth of the ranges to the north of the basin led to creation of the topographic barrier at ca. 7 Ma and a subsequent aridification in the Issyk-Kul basin. Increased subsidence and local tectonically-induced river system reorganization on the southern side of the basin enabled lake formation at ca. 5 Ma, while growth of the Kungey range blocked westward-draining rivers and led to sediment starvation and lake expansion. Denudational response of the Kyrgyz Tian Shan landscape is delayed due to aridity and only substantial cooling during the late Quaternary glacial cycles led to notable acceleration of denudation. Currently, increased glacier reduction and runoff controls a more rapid denudation of the northern slope of the Terskey range compared to other ranges of the Kyrgyz Tian Shan.},
  language  = {en}
}
@phdthesis{Molitor2023,
  author    = {Molitor, Louise},
  title     = {Strategic Residential Segregation},
  doi       = {10.25932/publishup-60135},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-601359},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xi, 210},
  year      = {2023},
  abstract  = {Residential segregation is a widespread phenomenon that can be observed in almost every major city. In these urban areas, residents with different ethnical or socioeconomic backgrounds tend to form homogeneous clusters. In Schelling's classical segregation model two types of agents are placed on a grid. An agent is content with its location if the fraction of its neighbors, which have the same type as the agent, is at least 𝜏, for some 0 < 𝜏 ≤ 1. Discontent agents simply swap their location with a randomly chosen other discontent agent or jump to a random empty location. The model gives a coherent explanation of how clusters can form even if all agents are tolerant, i.e., if they agree to live in mixed neighborhoods. For segregation to occur, all it needs is a slight bias towards agents preferring similar neighbors. Although the model is well studied, previous research focused on a random process point of view. However, it is more realistic to assume instead that the agents strategically choose where to live. We close this gap by introducing and analyzing game-theoretic models of Schelling segregation, where rational agents strategically choose their locations. As the first step, we introduce and analyze a generalized game-theoretic model that allows more than two agent types and more general underlying graphs modeling the residential area. We introduce different versions of Swap and Jump Schelling Games. Swap Schelling Games assume that every vertex of the underlying graph serving as a residential area is occupied by an agent and pairs of discontent agents can swap their locations, i.e., their occupied vertices, to increase their utility. In contrast, for the Jump Schelling Game, we assume that there exist empty vertices in the graph and agents can jump to these vacant vertices if this increases their utility. We show that the number of agent types as well as the structure of underlying graph heavily influence the dynamic properties and the tractability of finding an optimal strategy profile. As a second step, we significantly deepen these investigations for the swap version with 𝜏 = 1 by studying the influence of the underlying topology modeling the residential area on the existence of equilibria, the Price of Anarchy, and the dynamic properties. Moreover, we restrict the movement of agents locally. As a main takeaway, we find that both aspects influence the existence and the quality of stable states. Furthermore, also for the swap model, we follow sociological surveys and study, asking the same core game-theoretic questions, non-monotone singlepeaked utility functions instead of monotone ones, i.e., utility functions that are not monotone in the fraction of same-type neighbors. Our results clearly show that moving from monotone to non-monotone utilities yields novel structural properties and different results in terms of existence and quality of stable states. In the last part, we introduce an agent-based saturated open-city variant, the Flip Schelling Process, in which agents, based on the predominant type in their neighborhood, decide whether to change their types. We provide a general framework for analyzing the influence of the underlying topology on residential segregation and investigate the probability that an edge is monochrome, i.e., that both incident vertices have the same type, on random geometric and Erdős-R{\´e}nyi graphs. For random geometric graphs, we prove the existence of a constant c > 0 such that the expected fraction of monochrome edges after the Flip Schelling Process is at least 1/2 + c. For Erdős-R{\´e}nyi graphs, we show the expected fraction of monochrome edges after the Flip Schelling Process is at most 1/2 + o(1).},
  language  = {en}
}
@phdthesis{Heinze2023,
  author    = {Heinze, Peter Eric},
  title     = {An exploration of activity and therapist preferences and their predictors in German-speaking samples},
  doi       = {10.25932/publishup-60753},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-607534},
  school      = {Universit{\"a}t Potsdam},
  pages     = {195},
  year      = {2023},
  abstract  = {According to current definitions of evidence-based practice, patients' preferences play an important role for the psychotherapeutic process and outcomes. However, whereas a significant body of research investigated preferences regarding specific treatments, research on preferred activities or therapist characteristics is rare, investigated heterogeneous aspects with inconclusive results, lacked validated assessment tools, and neglected relevant preferences, their predictors as well as the perspective of mental health professionals. Therefore, the three studies of this dissertation aimed to address the most fundamental drawbacks in current preference research by providing a validated questionnaire, focus efforts on activity and therapist preferences and add preferences of psychotherapy trainees. To this end, Paper I reports the translation and validation of the 18-item Cooper-Norcross Inventory of Preference (C-NIP) in a broad, heterogeneous sample of N = 969 laypeople, resulting in good to acceptable reliabilities and first evidence of validity. However, the original factor structure was not replicated. Paper II assesses activity preferences of psychotherapists in training using the C-NIP and compares them with the initial laypeople sample. There were significant differences between both samples, with trainees preferring a more patient-directed, emotionally intense and confrontational approach than laypeople. CBT trainees preferred a more therapist-directed, present-focused, challenging and less emotional intense approach than psychodynamic or -analytic trainees. Paper III explores therapist preferences and tests predictors for specific preference choices. For most characteristics, more than half of the participants did not have specific preferences. Results pointed towards congruency effects (i.e., preference for similar characteristics), especially for members of marginalized groups. The dissertation provides both researchers and practitioners with a validated questionnaire, shows potentially obstructive differences between patients and therapists and underlines the importance of therapist characteristics for marginalized groups, thereby laying the foundation for future applications and implementations in research and practice.},
  language  = {en}
}
@phdthesis{Tan2023,
  author    = {Tan, Jing},
  title     = {Multi-Agent Reinforcement Learning for Interactive Decision-Making},
  doi       = {10.25932/publishup-60700},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-607000},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xii, 135},
  year      = {2023},
  abstract  = {Distributed decision-making studies the choices made among a group of interactive and self-interested agents. Specifically, this thesis is concerned with the optimal sequence of choices an agent makes as it tries to maximize its achievement on one or multiple objectives in the dynamic environment. The optimization of distributed decision-making is important in many real-life applications, e.g., resource allocation (of products, energy, bandwidth, computing power, etc.) and robotics (heterogeneous agent cooperation on games or tasks), in various fields such as vehicular network, Internet of Things, smart grid, etc. This thesis proposes three multi-agent reinforcement learning algorithms combined with game-theoretic tools to study strategic interaction between decision makers, using resource allocation in vehicular network as an example. Specifically, the thesis designs an interaction mechanism based on second-price auction, incentivizes the agents to maximize multiple short-term and long-term, individual and system objectives, and simulates a dynamic environment with realistic mobility data to evaluate algorithm performance and study agent behavior. Theoretical results show that the mechanism has Nash equilibria, is a maximization of social welfare and Pareto optimal allocation of resources in a stationary environment. Empirical results show that in the dynamic environment, our proposed learning algorithms outperform state-of-the-art algorithms in single and multi-objective optimization, and demonstrate very good generalization property in significantly different environments. Specifically, with the long-term multi-objective learning algorithm, we demonstrate that by considering the long-term impact of decisions, as well as by incentivizing the agents with a system fairness reward, the agents achieve better results in both individual and system objectives, even when their objectives are private, randomized, and changing over time. Moreover, the agents show competitive behavior to maximize individual payoff when resource is scarce, and cooperative behavior in achieving a system objective when resource is abundant; they also learn the rules of the game, without prior knowledge, to overcome disadvantages in initial parameters (e.g., a lower budget). To address practicality concerns, the thesis also provides several computational performance improvement methods, and tests the algorithm in a single-board computer. Results show the feasibility of online training and inference in milliseconds. There are many potential future topics following this work. 1) The interaction mechanism can be modified into a double-auction, eliminating the auctioneer, resembling a completely distributed, ad hoc network; 2) the objectives are assumed to be independent in this thesis, there may be a more realistic assumption regarding correlation between objectives, such as a hierarchy of objectives; 3) current work limits information-sharing between agents, the setup befits applications with privacy requirements or sparse signaling; by allowing more information-sharing between the agents, the algorithms can be modified for more cooperative scenarios such as robotics.},
  language  = {en}
}
@phdthesis{Gulsen2023,
  author    = {Gulsen, Ali},
  title     = {Empowering leadership, follower reflection, and leader well-being},
  doi       = {10.25932/publishup-58256},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-582562},
  school      = {Universit{\"a}t Potsdam},
  pages     = {196},
  year      = {2023},
  abstract  = {This research focuses on empowering leadership, a leadership style that shares autonomy and responsibilities with the followers. Empowering leadership enhances the meaningfulness of work by fostering participation in decision-making, expressing confidence in high performance, and providing autonomy in target setting (Cheong, 2016). I examine how empowering leadership affects followers' reflection. I used data from 528 individuals across 172 teams and found a positive relationship between empowering leadership and followers' reflection. Followers' reflection, in turn, is negatively associated with followers' withdrawal, which mediates the beneficial effect of empowering leadership on leaders' emotional exhaustion. As for the leaders, I propose that empowering leadership is negatively related also to leaders' emotional exhaustion. This research broadens our understanding of empowering leadership's effects on both followers and leaders. Moreover, it integrates empowering leadership, leader emotional exhaustion, and burnout literature. Overall, empowering leadership strengthens members' reflective attitudes and behaviors, which result in reduced withdrawal (and increased presence and contribution) in teams. Because the members contribute to team effort more, the leaders experience less emotional exhaustion. Hence, my work not only identifies new ways through which empowering leadership positively affects followers but also shows how these positive effects on followers benefit the leaders' well-being.},
  language  = {en}
}
@phdthesis{Alexoudi2023,
  author    = {Alexoudi, Xanthippi},
  title     = {Clarifying the discrepant results in the characterization of exoplanetary atmospheres},
  doi       = {10.25932/publishup-60565},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-605659},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xvi, 125},
  year      = {2023},
  abstract  = {Planets outside our solar system, so-called "exoplanets", can be detected with different methods, and currently more than 5000 exoplanets have been confirmed, according to NASA Exoplanet Archive. One major highlight of the studies on exoplanets in the past twenty years is the characterization of their atmospheres usingtransmission spectroscopy as the exoplanet transits. However, this characterization is a challenging process and sometimes there are reported discrepancies in the literature regarding the atmosphere of the same exoplanet. One potential reason for the observed atmospheric inconsistencies is called impact parameter degeneracy, and it is highly driven by the limb darkening effect of the host star. A brief introductionto those topics in presented in chapter 1, while the motivation and objectives of thiswork are described in chapter 2.The first goal is to clarify the origin of the transmission spectrum, which is anindicator of an exoplanet's atmosphere; whether it is real or influenced by the impactparameter degeneracy. A second goal is to determine whether photometry from space using the Transiting Exoplanet Survey Satellite (TESS), could improve on the major parameters, which are responsible for the aforementioned degeneracy, of known exoplanetary systems. Three individual projects were conducted in order toaddress those goals. The three manuscripts are presented, in short, in the manuscriptoverview in chapter 3.More specifically, in chapter 4, the first manuscript is presented, which is an ex-tended investigation on the impact parameter degeneracy and its application onsynthetic transmission spectra. Evidently, the limb darkening of the host star isan important driver for this effect. It keeps the degeneracy persisting through different groups of exoplanets, based on the uncertainty of their impact parameter and on the type of their host star. The second goal, was addressed in the second and third manuscripts (chapter 5 and chapter 6 respectively). Using observationsfrom the TESS mission, two samples of exoplanets were studied; 10 transiting inflated hot-Jupiters and 43 transiting grazing systems. Potentially, the refinement or confirmation of their major system parameters' measurements can assist in solving current or future discrepancies regarding their atmospheric characterization.In chapter 7 the conclusions of this work are discussed, while in chapter 8 itis proposed how TESS's measurements can be able to discern between erroneousinterpretations of transmission spectra, especially on systems where the impact parameter degeneracy is likely not applicable.},
  language  = {en}
}
@phdthesis{Doskoč2023,
  author    = {Doskoč, Vanja},
  title     = {Mapping restrictions in behaviourally correct learning},
  doi       = {10.25932/publishup-59311},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-593110},
  school      = {Universit{\"a}t Potsdam},
  pages     = {ix, 74},
  year      = {2023},
  abstract  = {In this thesis, we investigate language learning in the formalisation of Gold [Gol67]. Here, a learner, being successively presented all information of a target language, conjectures which language it believes to be shown. Once these hypotheses converge syntactically to a correct explanation of the target language, the learning is considered successful. Fittingly, this is termed explanatory learning. To model learning strategies, we impose restrictions on the hypotheses made, for example requiring the conjectures to follow a monotonic behaviour. This way, we can study the impact a certain restriction has on learning. Recently, the literature shifted towards map charting. Here, various seemingly unrelated restrictions are contrasted, unveiling interesting relations between them. The results are then depicted in maps. For explanatory learning, the literature already provides maps of common restrictions for various forms of data presentation. In the case of behaviourally correct learning, where the learners are required to converge semantically instead of syntactically, the same restrictions as in explanatory learning have been investigated. However, a similarly complete picture regarding their interaction has not been presented yet. In this thesis, we transfer the map charting approach to behaviourally correct learning. In particular, we complete the partial results from the literature for many well-studied restrictions and provide full maps for behaviourally correct learning with different types of data presentation. We also study properties of learners assessed important in the literature. We are interested whether learners are consistent, that is, whether their conjectures include the data they are built on. While learners cannot be assumed consistent in explanatory learning, the opposite is the case in behaviourally correct learning. Even further, it is known that learners following different restrictions may be assumed consistent. We contribute to the literature by showing that this is the case for all studied restrictions. We also investigate mathematically interesting properties of learners. In particular, we are interested in whether learning under a given restriction may be done with strongly Bc-locking learners. Such learners are of particular value as they allow to apply simulation arguments when, for example, comparing two learning paradigms to each other. The literature gives a rich ground on when learners may be assumed strongly Bc-locking, which we complete for all studied restrictions.},
  language  = {en}
}
@phdthesis{Hasl2023,
  author    = {Hasl, Andrea},
  title     = {Time matters: Adopting a lifespan developmental perspective on individual differences in skills, cumulative advantages, and the role of dynamic modeling approaches},
  doi       = {10.25932/publishup-59511},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-595112},
  school      = {Universit{\"a}t Potsdam},
  pages     = {274},
  year      = {2023},
  abstract  = {The impact of individual differences in cognitive skills and socioeconomic background on key educational, occupational, and health outcomes, as well as the mechanisms underlying inequalities in these outcomes across the lifespan, are two central questions in lifespan psychology. The contextual embeddedness of such questions in ontogenetic (i.e., individual, age-related) and historical time is a key element of lifespan psychological theoretical frameworks such as the HIstorical changes in DEvelopmental COntexts (HIDECO) framework (Drewelies et al., 2019). Because the dimension of time is also a crucial part of empirical research designs examining developmental change, a third central question in research on lifespan development is how the timing and spacing of observations in longitudinal studies might affect parameter estimates of substantive phenomena. To address these questions in the present doctoral thesis, I applied innovative state-of-the-art methodology including static and dynamic longitudinal modeling approaches, used data from multiple international panel studies, and systematically simulated data based on empirical panel characteristics, in three empirical studies. The first study of this dissertation, Study I, examined the importance of adolescent intelligence (IQ), grade point average (GPA), and parental socioeconomic status (pSES) for adult educational, occupational, and health outcomes over ontogenetic and historical time. To examine the possible impact of historical changes in the 20th century on the relationships between adolescent characteristics and key adult life outcomes, the study capitalized on data from two representative US cohort studies, the National Longitudinal Surveys of Youth 1979 and 1997, whose participants were born in the late 1960s and 1980s, respectively. Adolescent IQ, GPA, and pSES were positively associated with adult educational attainment, wage levels, and mental and physical health. Across historical time, the influence of IQ and pSES for educational, occupational, and health outcomes remained approximately the same, whereas GPA gained in importance over time for individuals born in the 1980s. The second study of this dissertation, Study II, aimed to examine strict cumulative advantage (CA) processes as possible mechanisms underlying individual differences and inequality in wage development across the lifespan. It proposed dynamic structural equation models (DSEM) as a versatile statistical framework for operationalizing and empirically testing strict CA processes in research on wages and wage dynamics (i.e., wage levels and growth rates). Drawing on longitudinal representative data from the US National Longitudinal Survey of Youth 1979, the study modeled wage levels and growth rates across 38 years. Only 0.5 \% of the sample revealed strict CA processes and explosive wage growth (autoregressive coefficients AR > 1), with the majority of individuals following logarithmic wage trajectories across the lifespan. Adolescent intelligence (IQ) and adult highest educational level explained substantial heterogeneity in initial wage levels and long-term wage growth rates over time. The third study of this dissertation, Study III, investigated the role of observation timing variability in the estimation of non-experimental intervention effects in panel data. Although longitudinal studies often aim at equally spaced intervals between their measurement occasions, this goal is hardly ever met. Drawing on continuous time dynamic structural equation models, the study examines the -seemingly counterintuitive - potential benefits of measurement intervals that vary both within and between participants (often called individually varying time intervals, IVTs) in a panel study. It illustrates the method by modeling the effect of the transition from primary to secondary school on students' academic motivation using empirical data from the German National Educational Panel Study (NEPS). Results of a simulation study based on this real-life example reveal that individual variation in time intervals can indeed benefit the estimation precision and recovery of the true intervention effect parameters.},
  language  = {en}
}
@phdthesis{Hagedorn2023,
  author    = {Hagedorn, Christopher},
  title     = {Parallel execution of causal structure learning on graphics processing units},
  doi       = {10.25932/publishup-59758},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-597582},
  school      = {Universit{\"a}t Potsdam},
  pages     = {8, 192},
  year      = {2023},
  abstract  = {Learning the causal structures from observational data is an omnipresent challenge in data science. The amount of observational data available to Causal Structure Learning (CSL) algorithms is increasing as data is collected at high frequency from many data sources nowadays. While processing more data generally yields higher accuracy in CSL, the concomitant increase in the runtime of CSL algorithms hinders their widespread adoption in practice. CSL is a parallelizable problem. Existing parallel CSL algorithms address execution on multi-core Central Processing Units (CPUs) with dozens of compute cores. However, modern computing systems are often heterogeneous and equipped with Graphics Processing Units (GPUs) to accelerate computations. Typically, these GPUs provide several thousand compute cores for massively parallel data processing. To shorten the runtime of CSL algorithms, we design efficient execution strategies that leverage the parallel processing power of GPUs. Particularly, we derive GPU-accelerated variants of a well-known constraint-based CSL method, the PC algorithm, as it allows choosing a statistical Conditional Independence test (CI test) appropriate to the observational data characteristics. Our two main contributions are: (1) to reflect differences in the CI tests, we design three GPU-based variants of the PC algorithm tailored to CI tests that handle data with the following characteristics. We develop one variant for data assuming the Gaussian distribution model, one for discrete data, and another for mixed discrete-continuous data and data with non-linear relationships. Each variant is optimized for the appropriate CI test leveraging GPU hardware properties, such as shared or thread-local memory. Our GPU-accelerated variants outperform state-of-the-art parallel CPU-based algorithms by factors of up to 93.4× for data assuming the Gaussian distribution model, up to 54.3× for discrete data, up to 240× for continuous data with non-linear relationships and up to 655× for mixed discrete-continuous data. However, the proposed GPU-based variants are limited to datasets that fit into a single GPU's memory. (2) To overcome this shortcoming, we develop approaches to scale our GPU-based variants beyond a single GPU's memory capacity. For example, we design an out-of-core GPU variant that employs explicit memory management to process arbitrary-sized datasets. Runtime measurements on a large gene expression dataset reveal that our out-of-core GPU variant is 364 times faster than a parallel CPU-based CSL algorithm. Overall, our proposed GPU-accelerated variants speed up CSL in numerous settings to foster CSL's adoption in practice and research.},
  language  = {en}
}
@phdthesis{Rembe2023,
  author    = {Rembe, Johannes},
  title     = {Hercynian to Eocimmerian evolution of the North Pamir in Central Asia},
  doi       = {10.25932/publishup-59751},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-597510},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xxvi, 154, CX},
  year      = {2023},
  abstract  = {The North Pamir, part of the India-Asia collision zone, essentially formed during the late Paleozoic to late Triassic-early Jurassic. Coeval to the subduction of the Turkestan ocean—during the Carboniferous Hercynian orogeny in the Tien Shan—a portion of the Paleo-Tethys ocean subducted northward and lead to the formation and obduction of a volcanic arc. This Carboniferous North Pamir arc is of Andean style in the western Darvaz segment and trends towards an intraoceanic arc in the eastern, Oytag segment. A suite of arc-volcanic rocks and intercalated, marine sediments together with intruded voluminous plagiogranites (trondhjemite and tonalite) and granodiorites was uplifted and eroded during the Permian, as demonstrated by widespread sedimentary unconformities. Today it constitutes a major portion of the North Pamir. In this work, the first comprehensive Uranium-Lead (U-Pb) laser-ablation inductively-coupled-plasma mass-spectrometry (LA-ICP-MS) radiometric age data are presented along with geochemical data from the volcanic and plutonic rocks of the North Pamir volcanic arc. Zircon U-Pb data indicate a major intrusive phase between 340 and 320 Ma. The magmatic rocks show an arc-signature, with more primitive signatures in the Oytag segment compared to the Darvaz segment. Volcanic rocks in the Chinese North Pamir were indirectly dated by determining the age of ocean floor alteration. We investigate calcite filled vesicles and show that oxidative sea water and the basaltic host rock are major trace element sources. The age of ocean floor alteration, within a range of 25 Ma, constrains the extrusion age of the volcanic rocks. In the Chinese Pamir, arc-volcanic basalts have been dated to the Visean-Serpukhovian boundary. This relates the North Pamir volcanic arc to coeval units in the Tien Shan. Our findings further question the idea of a continuous Tarim-Tajik continent in the Paleozoic. From the Permian (Guadalupian) on, a progressive sea-retreat led to continental conditions in the northeastern Pamir. Large parts of Central Asia were affected by transcurrent tectonics, while subduction of the Paleo-Tethys went on south of the accreted North Pamir arc, likely forming an accretionary wedge, representing an early stage of the later Karakul-Mazar tectonic unit. Graben systems dissected the Permian carbonate platforms, that formed on top of the uplifted Carboniferous arc in the central and western North Pamir. A continental graben formed in the eastern North Pamir. Zircon U-Pb dating suggest initiation of volcanic activity at ~260 Ma. Extensional tectonics prevailed throughout the Triassic, forming the Hindukush-North Pamir rift system. New geochemistry and zircon U-Pb data tie volcanic rocks, found in the Chinese Pamir, to coeval arc-related plutonic rocks found within the Karakul-Mazar arc-accretionary complex. The sedimentary environment in the continental North Pamir rift evolved from an alluvial plain, lake dominated environment in the Guadalupian to a coarser-clastic, alluvial, braided river dominated in the Triassic. Volcanic activity terminated in the early Jurassic. We conducted Potassium-Argon (K-Ar) fine-fraction dating on the Shala Tala thrust fault, a major structure juxtaposing Paleozoic marine units of lower greenschist to amphibolite facies conditions against continental Permian deposits. Fault slip under epizonal conditions is dated to 204.8 ± 3.7 Ma (2σ), implying Rhaetian nappe emplacement. This pinpoints the Central-North Pamir collision, since the Shala Tala thrust was a back-thrust at that time.},
  language  = {en}
}
@misc{Pflaumer2023,
  type      = {Master Thesis},
  author    = {Pflaumer, Valerie},
  title     = {Haunted houses, haunted selves - feminist readings of uncanny domesticity},
  doi       = {10.25932/publishup-57566},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-575664},
  school      = {Universit{\"a}t Potsdam},
  pages     = {71},
  year      = {2023},
  abstract  = {The aesthetic phenomenon of the uncanny in literature and art is a spatial and gendered aesthetic concept, which is expressed in the spatial characteristics of a literary or photographic narrative. The intention of this thesis is to evaluate the entanglement of the uncanny, space, domesticity and femininity in the context of Gothic literature and photography. These four objects can only be read in their interplay with each other and how they each function as structural principles in the framework of Gothic fiction and photography. The literary texts, Charlotte Perkins Gilman's "The Yellow Wall-Paper" (1892) and Shirley Jackson's "The Lovely House" (1950) and The Haunting of Hill House (1959) as well as Francesca Woodman's self-portraits that will be discussed further share one particular quality; they use the haunted house motif to express the protagonist's psychological state by transferring mental hauntings onto the narrative's spatial layer. The establishment of a connection between the concepts at hand, the uncanny, domesticity, spatiality and femininity, is the basis for the first half of the thesis. What follows is an overview of how domestic politics and gendered perceptions of and behaviors in spaces are expressed in the Gothic mode in particular. In the literary analysis two ways in which the Freudian uncanny constitutes itself in the haunted house narrative, first the house as the site of repetition and second the house as a stand-in for the maternal body, are examined. Drawing from Gernot B{\"o}hme's and Martina L{\"o}w's theoretic work on space and atmosphere the thesis focuses on the different aesthetic strategies that produce the uncanny atmosphere associated with the Gothic haunted house. The female subjects at the narratives' center are in the ambiguous process of disappearing or becoming, this (dis)appearing act is facilitated by their haunted surroundings. In the case of the unnamed narrator in "Wall-Paper" her suppressed rage at her husband is mirrored in the strangled woman trapped inside the yellow wallpaper. Once she recognizes her doppelganger the union of her two selves takes place in the short story's dramatic climax. In Shirley Jackson's literary works the haunted houses, protagonists in themselves, entrap, transform, and ultimately devour their female daughter-victims. The haunted houses are symbols, means and places of the continuous tradition of female entrapment within the domestic sphere, be it as wives, mothers or daughters. In Francesca Woodman's self-portraits the themes of creation/destruction and becoming/disappearing within the ruinous (post)domestic sphere are acted out by the fragmented and blurry female figure who intriguingly oscillates between self-empowerment and submission to destruction.},
  language  = {en}
}
@book{BarkowskyGiese2023,
  author    = {Barkowsky, Matthias and Giese, Holger},
  title     = {Modular and incremental global model management with extended generalized discrimination networks},
  number    = {154},
  isbn      = {978-3-86956-555-2},
  issn      = {1613-5652},
  doi       = {10.25932/publishup-57396},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-573965},
  publisher      = {Universit{\"a}t Potsdam},
  pages     = {63 -- 63},
  year      = {2023},
  abstract  = {Complex projects developed under the model-driven engineering paradigm nowadays often involve several interrelated models, which are automatically processed via a multitude of model operations. Modular and incremental construction and execution of such networks of models and model operations are required to accommodate efficient development with potentially large-scale models. The underlying problem is also called Global Model Management. In this report, we propose an approach to modular and incremental Global Model Management via an extension to the existing technique of Generalized Discrimination Networks (GDNs). In addition to further generalizing the notion of query operations employed in GDNs, we adapt the previously query-only mechanism to operations with side effects to integrate model transformation and model synchronization. We provide incremental algorithms for the execution of the resulting extended Generalized Discrimination Networks (eGDNs), as well as a prototypical implementation for a number of example eGDN operations. Based on this prototypical implementation, we experiment with an application scenario from the software development domain to empirically evaluate our approach with respect to scalability and conceptually demonstrate its applicability in a typical scenario. Initial results confirm that the presented approach can indeed be employed to realize efficient Global Model Management in the considered scenario.},
  language  = {en}
}
@phdthesis{Zuhr2023,
  author    = {Zuhr, Alexandra},
  title     = {Proxy signal formation in palaeoclimate archives},
  doi       = {10.25932/publishup-58286},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-582864},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xx, 167},
  year      = {2023},
  abstract  = {Throughout the last ~3 million years, the Earth's climate system was characterised by cycles of glacial and interglacial periods. The current warm period, the Holocene, is comparably stable and stands out from this long-term cyclicality. However, since the industrial revolution, the climate has been increasingly affected by a human-induced increase in greenhouse gas concentrations. While instrumental observations are used to describe changes over the past ~200 years, indirect observations via proxy data are the main source of information beyond this instrumental era. These data are indicators of past climatic conditions, stored in palaeoclimate archives around the Earth. The proxy signal is affected by processes independent of the prevailing climatic conditions. In particular, for sedimentary archives such as marine sediments and polar ice sheets, material may be redistributed during or after the initial deposition and subsequent formation of the archive. This leads to noise in the records challenging reliable reconstructions on local or short time scales. This dissertation characterises the initial deposition of the climatic signal and quantifies the resulting archive-internal heterogeneity and its influence on the observed proxy signal to improve the representativity and interpretation of climate reconstructions from marine sediments and ice cores. To this end, the horizontal and vertical variation in radiocarbon content of a box-core from the South China Sea is investigated. The three-dimensional resolution is used to quantify the true uncertainty in radiocarbon age estimates from planktonic foraminifera with an extensive sampling scheme, including different sample volumes and replicated measurements of batches of small and large numbers of specimen. An assessment on the variability stemming from sediment mixing by benthic organisms reveals strong internal heterogeneity. Hence, sediment mixing leads to substantial time uncertainty of proxy-based reconstructions with error terms two to five times larger than previously assumed. A second three-dimensional analysis of the upper snowpack provides insights into the heterogeneous signal deposition and imprint in snow and firn. A new study design which combines a structure-from-motion photogrammetry approach with two-dimensional isotopic data is performed at a study site in the accumulation zone of the Greenland Ice Sheet. The photogrammetry method reveals an intermittent character of snowfall, a layer-wise snow deposition with substantial contributions by wind-driven erosion and redistribution to the final spatially variable accumulation and illustrated the evolution of stratigraphic noise at the surface. The isotopic data show the preservation of stratigraphic noise within the upper firn column, leading to a spatially variable climate signal imprint and heterogeneous layer thicknesses. Additional post-depositional modifications due to snow-air exchange are also investigated, but without a conclusive quantification of the contribution to the final isotopic signature. Finally, this characterisation and quantification of the complex signal formation in marine sediments and polar ice contributes to a better understanding of the signal content in proxy data which is needed to assess the natural climate variability during the Holocene.},
  language  = {en}
}
@misc{MarggrafLindeckeVoigtetal.2023,
  author    = {Marggraf, Lara Christin and Lindecke, Oliver and Voigt, Christian C. and Pētersons, Gunārs and Voigt-Heucke, Silke Luise},
  title     = {Nathusius' bats, Pipistrellus nathusii, bypass mating opportunities of their own species, but respond to foraging heterospecifics on migratory transit flights},
  series = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe},
  journal   = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe},
  number    = {1306},
  issn      = {1866-8372},
  doi       = {10.25932/publishup-57957},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-579574},
  pages     = {10},
  year      = {2023},
  abstract  = {In late summer, migratory bats of the temperate zone face the challenge of accomplishing two energy-demanding tasks almost at the same time: migration and mating. Both require information and involve search efforts, such as localizing prey or finding potential mates. In non-migrating bat species, playback studies showed that listening to vocalizations of other bats, both con-and heterospecifics, may help a recipient bat to find foraging patches and mating sites. However, we are still unaware of the degree to which migrating bats depend on con-or heterospecific vocalizations for identifying potential feeding or mating opportunities during nightly transit flights. Here, we investigated the vocal responses of Nathusius' pipistrelle bats, Pipistrellus nathusii, to simulated feeding and courtship aggregations at a coastal migration corridor. We presented migrating bats either feeding buzzes or courtship calls of their own or a heterospecific migratory species, the common noctule, Nyctalus noctula. We expected that during migratory transit flights, simulated feeding opportunities would be particularly attractive to bats, as well as simulated mating opportunities which may indicate suitable roosts for a stopover. However, we found that when compared to the natural silence of both pre-and post-playback phases, bats called indifferently during the playback of conspecific feeding sounds, whereas P. nathusii echolocation call activity increased during simulated feeding of N. noctula. In contrast, the call activity of P. nathusii decreased during the playback of conspecific courtship calls, while no response could be detected when heterospecific call types were broadcasted. Our results suggest that while on migratory transits, P. nathusii circumnavigate conspecific mating aggregations, possibly to save time or to reduce the risks associated with social interactions where aggression due to territoriality might be expected. This avoidance behavior could be a result of optimization strategies by P. nathusii when performing long-distance migratory flights, and it could also explain the lack of a response to simulated conspecific feeding. However, the observed increase of activity in response to simulated feeding of N. noctula, suggests that P. nathusii individuals may be eavesdropping on other aerial hawking insectivorous species during migration, especially if these occupy a slightly different foraging niche.},
  language  = {en}
}
@misc{OgunkolaGuiraudieCaprazFeronetal.2023,
  author    = {Ogunkola, Moses Olalekan and Guiraudie-Capraz, Gaelle and F{\´e}ron, Fran{\c{c}}ois and Leimk{\"u}hler, Silke},
  title     = {The Human Mercaptopyruvate Sulfurtransferase TUM1 Is Involved in Moco Biosynthesis, Cytosolic tRNA Thiolation and Cellular Bioenergetics in Human Embryonic Kidney Cells},
  series = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe},
  journal   = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe},
  number    = {1307},
  issn      = {1866-8372},
  doi       = {10.25932/publishup-57958},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-579580},
  pages     = {23},
  year      = {2023},
  abstract  = {Sulfur is an important element that is incorporated into many biomolecules in humans. The incorporation and transfer of sulfur into biomolecules is, however, facilitated by a series of different sulfurtransferases. Among these sulfurtransferases is the human mercaptopyruvate sulfurtransferase (MPST) also designated as tRNA thiouridine modification protein (TUM1). The role of the human TUM1 protein has been suggested in a wide range of physiological processes in the cell among which are but not limited to involvement in Molybdenum cofactor (Moco) biosynthesis, cytosolic tRNA thiolation and generation of H2S as signaling molecule both in mitochondria and the cytosol. Previous interaction studies showed that TUM1 interacts with the L-cysteine desulfurase NFS1 and the Molybdenum cofactor biosynthesis protein 3 (MOCS3). Here, we show the roles of TUM1 in human cells using CRISPR/Cas9 genetically modified Human Embryonic Kidney cells. Here, we show that TUM1 is involved in the sulfur transfer for Molybdenum cofactor synthesis and tRNA thiomodification by spectrophotometric measurement of the activity of sulfite oxidase and liquid chromatography quantification of the level of sulfur-modified tRNA. Further, we show that TUM1 has a role in hydrogen sulfide production and cellular bioenergetics.},
  language  = {en}
}
@misc{Assen2023,
  author    = {Assen, Louisa},
  title     = {Digitalization as a Provider of Sustainability?},
  series = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Wirtschafts- und Sozialwissenschaftliche Reihe},
  journal   = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Wirtschafts- und Sozialwissenschaftliche Reihe},
  number    = {155},
  issn      = {1867-5808},
  doi       = {10.25932/publishup-58640},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-586408},
  pages     = {20},
  year      = {2023},
  abstract  = {Digitalization, as well as sustainability, are gaining increased relevance and have attracted significant attention in research and practice. However, the research already published about this topic examining digitalization in the retail sector does not consider the acceptance of related innovations, nor their impact on sustainability. Therefore, this article critically analyzes the acceptance of customers towards digital technologies in fashion stores as well as their impact on sustainability in the textile industry. The comprehensive analysis of the literature and the current state of research provide the basis of this paper. Theoretical models, such as the Technology-Acceptance-Model (TAM) and the Unified Theory of Acceptance and Use of Technology 2 (UTAUT 2) enable the evaluation of expectations and acceptance, as well as the assessment of possible inhibitory factors for the subsequent descriptive and statistical examination of the acceptance of digital technologies in fashion stores. The research on this subject was examined in a quantitative way. The key findings show that customers do accept digital technologies in fashion stores. The final part of this contribution describes the innovative Digitalization 4 Sustainability Framework which shows that digital technologies at the point of sale (PoS) in fashion stores could have a positive impact on sustainability. Overall, this paper shows that it is particularly important for fashion stores to concentrate on their individual strengths and customer needs as well as to indicate a more sustainable way by using digital technologies, in order to achieve added value for the customers and to set themselves apart from the competition while designing a more sustainable future. Moreover, fashion stores should make it a point of their honor to harness the power of digitalization for sake of sustainability and economic value creation.},
  language  = {en}
}
@phdthesis{Timme2023,
  author    = {Timme, Sinika},
  title     = {Affective responses during exercise and situated exercise-related decision-making},
  doi       = {10.25932/publishup-61432},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-614323},
  school      = {Universit{\"a}t Potsdam},
  pages     = {V, 123},
  year      = {2023},
  abstract  = {The field of exercise psychology has established robust evidence on the health benefits of physical activity. However, interventions to promote sustained exercise behavior have often proven ineffective. This dissertation addresses challenges in the field, particularly the neglect of situated and affective processes in understanding and changing exercise behavior. Dual process models, considering both rational and affective processes, have gained recognition. The Affective Reflective Theory of Physical Inactivity and Exercise (ART) is a notable model in this context, positing that situated processes in-the-moment of choice influence exercise decisions and subsequent exercise behavior. The dissertation identifies current challenges within exercise psychology and proposes methodological and theoretical advancements. It emphasizes the importance of momentary affective states and situated processes, offering alternatives to self-reported measures and advocating for a more comprehensive modeling of individual variability. The focus is on the affective processes during exercise, theorized to reappear in momentary decision-making, shaping overall exercise behavior. The first publication introduces a new method by using automated facial action analysis to measure variable affective responses during exercise. It explores how these behavioral indicators covary with self-reported measures of affective valence and perceived exertion. The second publication delves into situated processes at the moment of choice between exercise and non-exercise options, revealing that intraindividual factors play a crucial role in explaining exercise-related choices. The third publication presents an open-source research tool, the Decisional Preferences in Exercising Test (DPEX), designed to capture repeated situated decisions and predict exercise behavior based on past experiences. The findings challenge previous assumptions and provide insights into the complex interplay of affective responses, situated processes, and exercise choices. The dissertation underscores the need for individualized interventions that manipulate affective responses during exercise and calls for systematic testing to establish causal links to automatic affective processes and subsequent exercise behavior. This dissertation highlights the necessity for methodological and conceptual refinements in understanding and promoting exercise behavior, ultimately contributing to the broader goal of combating increasing inactivity trends.},
  language  = {en}
}
@phdthesis{Kunkel2023,
  author    = {Kunkel, Stefanie},
  title     = {Green industry through industry 4.0? Expected and observed effects of digitalisation in industry for environmental sustainability},
  doi       = {10.25932/publishup-61395},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-613954},
  school      = {Universit{\"a}t Potsdam},
  pages     = {vii, 168},
  year      = {2023},
  abstract  = {Digitalisation in industry - also called "Industry 4.0" - is seen by numerous actors as an opportunity to reduce the environmental impact of the industrial sector. The scientific assessments of the effects of digitalisation in industry on environmental sustainability, however, are ambivalent. This cumulative dissertation uses three empirical studies to examine the expected and observed effects of digitalisation in industry on environmental sustainability. The aim of this dissertation is to identify opportunities and risks of digitalisation at different system levels and to derive options for action in politics and industry for a more sustainable design of digitalisation in industry. I use an interdisciplinary, socio-technical approach and look at selected countries of the Global South (Study 1) and the example of China (all studies). In the first study (section 2, joint work with Marcel Matthess), I use qualitative content analysis to examine digital and industrial policies from seven different countries in Africa and Asia for expectations regarding the impact of digitalisation on sustainability and compare these with the potentials of digitalisation for sustainability in the respective country contexts. The analysis reveals that the documents express a wide range of vague expectations that relate more to positive indirect impacts of information and communication technology (ICT) use, such as improved energy efficiency and resource management, and less to negative direct impacts of ICT, such as electricity consumption through ICT. In the second study (section 3, joint work with Marcel Matthess, Grischa Beier and Bing Xue), I conduct and analyse interviews with 18 industry representatives of the electronics industry from Europe, Japan and China on digitalisation measures in supply chains using qualitative content analysis. I find that while there are positive expectations regarding the effects of digital technologies on supply chain sustainability, their actual use and observable effects are still limited. Interview partners can only provide few examples from their own companies which show that sustainability goals have already been pursued through digitalisation of the supply chain or where sustainability effects, such as resource savings, have been demonstrably achieved. In the third study (section 4, joint work with Peter Neuh{\"a}usler, Melissa Dachrodt and Marcel Matthess), I conduct an econometric panel data analysis. I examine the relationship between the degree of Industry 4.0, energy consumption and energy intensity in ten manufacturing sectors in China between 2006 and 2019. The results suggest that overall, there is no significant relationship between the degree of Industry 4.0 and energy consumption or energy intensity in manufacturing sectors in China. However, differences can be found in subgroups of sectors. I find a negative correlation of Industry 4.0 and energy intensity in highly digitalised sectors, indicating an efficiency-enhancing effect of Industry 4.0 in these sectors. On the other hand, there is a positive correlation of Industry 4.0 and energy consumption for sectors with low energy consumption, which could be explained by the fact that digitalisation, such as the automation of previously mainly labour-intensive sectors, requires energy and also induces growth effects. In the discussion section (section 6) of this dissertation, I use the classification scheme of the three levels macro, meso and micro, as well as of direct and indirect environmental effects to classify the empirical observations into opportunities and risks, for example, with regard to the probability of rebound effects of digitalisation at the three levels. I link the investigated actor perspectives (policy makers, industry representatives), statistical data and additional literature across the system levels and consider political economy aspects to suggest fields of action for more sustainable (digitalised) industries. The dissertation thus makes two overarching contributions to the academic and societal discourse. First, my three empirical studies expand the limited state of research at the interface between digitalisation in industry and sustainability, especially by considering selected countries in the Global South and the example of China. Secondly, exploring the topic through data and methods from different disciplinary contexts and taking a socio-technical point of view, enables an analysis of (path) dependencies, uncertainties, and interactions in the socio-technical system across different system levels, which have often not been sufficiently considered in previous studies. The dissertation thus aims to create a scientifically and practically relevant knowledge basis for a value-guided, sustainability-oriented design of digitalisation in industry.},
  language  = {en}
}
@phdthesis{Pregla2023,
  author    = {Pregla, Dorothea},
  title     = {Variability in sentence processing performance in German people with aphasia and unimpaired German native speakers},
  doi       = {10.25932/publishup-61420},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-614201},
  school      = {Universit{\"a}t Potsdam},
  pages     = {171},
  year      = {2023},
  abstract  = {Individuals with aphasia vary in the speed and accuracy they perform sentence comprehension tasks. Previous results indicate that the performance patterns of individuals with aphasia vary between tasks (e.g., Caplan, DeDe, \& Michaud, 2006; Caplan, Michaud, \& Hufford, 2013a). Similarly, it has been found that the comprehension performance of individuals with aphasia varies between homogeneous test sentences within and between sessions (e.g., McNeil, Hageman, \& Matthews, 2005). These studies ascribed the variability in the performance of individuals with aphasia to random noise. This conclusion would be in line with an influential theory on sentence comprehension in aphasia, the resource reduction hypothesis (Caplan, 2012). However, previous studies did not directly compare variability in language-impaired and language-unimpaired adults. Thus, it is still unclear how the variability in sentence comprehension differs between individuals with and without aphasia. Furthermore, the previous studies were exclusively carried out in English. Therefore, the findings on variability in sentence processing in English still need to be replicated in a different language. This dissertation aims to give a systematic overview of the patterns of variability in sentence comprehension performance in aphasia in German and, based on this overview, to put the resource reduction hypothesis to the test. In order to reach the first aim, variability was considered on three different dimensions (persons, measures, and occasions) following the classification by Hultsch, Strauss, Hunter, and MacDonald (2011). At the dimension of persons, the thesis compared the performance of individuals with aphasia and language-unimpaired adults. At the dimension of measures, this work explored the performance across different sentence comprehension tasks (object manipulation, sentence-picture matching). Finally, at the dimension of occasions, this work compared the performance in each task between two test sessions. Several methods were combined to study variability to gain a large and diverse database. In addition to the offline comprehension tasks, the self-paced-listening paradigm and the visual world eye-tracking paradigm were used in this work. The findings are in line with the previous results. As in the previous studies, variability in sentence comprehension in individuals with aphasia emerged between test sessions and between tasks. Additionally, it was possible to characterize the variability further using hierarchical Bayesian models. For individuals with aphasia, it was shown that both between-task and between-session variability are unsystematic. In contrast to that, language-unimpaired individuals exhibited systematic differences between measures and between sessions. However, these systematic differences occurred only in the offline tasks. Hence, variability in sentence comprehension differed between language-impaired and language-unimpaired adults, and this difference could be narrowed down to the offline measures. Based on this overview of the patterns of variability, the resource reduction hypothesis was evaluated. According to the hypothesis, the variability in the performance of individuals with aphasia can be ascribed to random fluctuations in the resources available for sentence processing. Given that the performance of the individuals with aphasia varied unsystematically, the results support the resource reduction hypothesis. Furthermore, the thesis proposes that the differences in variability between language-impaired and language-unimpaired adults can also be explained by the resource reduction hypothesis. More specifically, it is suggested that the systematic changes in the performance of language-unimpaired adults are due to decreasing fluctuations in available processing resources. In parallel, the unsystematic variability in the performance of individuals with aphasia could be due to constant fluctuations in available processing resources. In conclusion, the systematic investigation of variability contributes to a better understanding of language processing in aphasia and thus enriches aphasia research.},
  language  = {en}
}
@phdthesis{Petrich2023,
  author    = {Petrich, Annett},
  title     = {Quantitative fluorescence microscopy methods to investigate molecular interactions and dynamics in living cells},
  doi       = {10.25932/publishup-61180},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-611800},
  school      = {Universit{\"a}t Potsdam},
  pages     = {244},
  year      = {2023},
  abstract  = {Biomolecules such as proteins and lipids have vital roles in numerous cellular functions, including biomolecule transport, protein functions, cellular homeostasis and biomembrane integrity. Traditional biochemistry methods do not provide precise information about cellular biomolecule distribution and behavior under native environmental conditions since they are not transferable to live cell samples. Consequently, this can lead to inaccuracies in quantifying biomolecule interactions due to potential complexities arising from the heterogeneity of native biomembranes. To overcome these limitations, minimal invasive microscopic techniques, such as fluorescence fluctuation spectroscopy (FFS) in combination with fluorescence proteins (FPs) and fluorescence lipid analogs, have been developed. FFS techniques and membrane property sensors enable the quantification of various parameters, including concentration, dynamics, oligomerization, and interaction of biomolecules in live cell samples. In this work, several FFS approaches and membrane property sensors were implemented and employed to examine biological processes of diverse context. Multi-color scanning fluorescence fluctuation spectroscopy (sFCS) was used the examine protein oligomerization, protein-protein interactions (PPIs) and protein dynamics at the cellular plasma membrane (PM). Additionally, two-color number and brightness (N\&B) analysis was extended with the cross-correlation analysis in order to quantify hetero-interactions of proteins in the PM with very slow motion, which would not accessible with sFCS due strong initial photobleaching. Furthermore, two semi-automatic analysis pipelines were designed: spectral F{\"o}rster resonance energy transfer (FRET) analysis to study changes in membrane charge at the inner leaflet of the PM, and spectral generalized polarization (GP) imaging and spectral phasor analysis to monitor changes in membrane fluidity and order. An important parameter for studying PPIs is molecular brightness, which directly determines oligomerization and can be extracted from FFS data. However, FPs often display complex photophysical transitions, including dark states. Therefore, it is crucial to characterize FPs for their dark-states to ensure reliable oligomerization measurements. In this study, N\&B and sFCS analysis were applied to determine photophysical properties of novel green FPs under different conditions (i.e., excitation power and pH) in living cells. The results showed that the new FPs, mGreenLantern (mGL) and Gamillus, exhibited the highest molecular brightness at the cost of lower photostability. The well-established monomeric enhanced green fluorescent protein (mEGFP) remained the best option to investigate PPIs at lower pH, while mGL was best suited for neutral pH, and Gamillus for high pH. These findings provide guidance for selecting an appropriate FP to quantify PPIs via FFS under different environmental conditions. Next, several biophysical fluorescence microscopy approaches (i.e., sFCS, GP imaging, membrane charge FRET) were employed to monitor changes in lipid-lipid-packing in biomembranes in different biological context. Lipid metabolism in cancer cells is known to support rapid proliferation and metastasis. Therefore, targeting lipid synthesis or membrane integrity holds immense promise as an anticancer strategy. However, the mechanism of action of the novel agent erufosine (EPC3) on membrane stability is not fully under stood. The present work revealed that EPC3 reduces lipid packing and composition as well as increased membrane fluidity and dynamic, hence, modifies lipid-lipid-interaction. These effects on membrane integrity were likely triggered by modulations in lipid metabolism and membrane organization. In the case of influenza A virus (IAV) infection, regulation of lipid metabolism is crucial for multiple steps in IAV replication and is related to the pathogenicity of IAV. Here, it is shown for the first time that IAV infection triggers a local enrichment of negatively charged lipids at the inner leaflet of the PM, which decreases membrane fluidity and dynamic, as well as increases lipid packing at the assembly site in living cells. This suggests that IAV alters lipid-lipid interactions and organization at the PM. Overall, this work highlights the potential of biophysical techniques as a screening platform for studying membrane properties in living cells at the single-cell level. Finally, this study addressed remaining questions about the early stage of IAV assembly. The recruitment of matrix protein 1 (M1) and its interaction with other viral surface proteins, hemagglutinin (HA), neuraminidase (NA), and matrix protein 2 (M2), has been a subject of debate due to conflicting results. In this study, different FFS approaches were performed in transfected cells to investigate interactions between IAV proteins themselves and host factors at the PM. FFS measurements revealed that M2 interacts strongly with M1, leading to the translocation of M1 to the PM. This interaction likely took place along the non-canonical pathway, as evidenced by the detection of an interaction between M2 and the host factor LC3-II, leading to the recruitment of LC3-II to the PM. Moreover, weaker interaction was observed between HA and membrane-bound M1, and no interaction between NA and M1. Interestingly, higher oligomeric states of M1 were only detectable in infected cells. These results indicate that M2 initiates virion assembly by recruiting M1 to the PM, which may serve as a platform for further interactions with viral proteins and host factors.},
  language  = {en}
}
@phdthesis{HerreroAlonso2023,
  author    = {Herrero Alonso, Yohana},
  title     = {Properties of high-redshift galaxies in different environments},
  doi       = {10.25932/publishup-61328},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-613288},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xiii, 114},
  year      = {2023},
  abstract  = {The Lyman-𝛼 (Ly𝛼) line commonly assists in the detection of high-redshift galaxies, the so-called Lyman-alpha emitters (LAEs). LAEs are useful tools to study the baryonic matter distribution of the high-redshift universe. Exploring their spatial distribution not only reveals the large-scale structure of the universe at early epochs, but it also provides an insight into the early formation and evolution of the galaxies we observe today. Because dark matter halos (DMHs) serve as sites of galaxy formation, the LAE distribution also traces that of the underlying dark matter. However, the details of this relation and their co-evolution over time remain unclear. Moreover, theoretical studies predict that the spatial distribution of LAEs also impacts their own circumgalactic medium (CGM) by influencing their extended Ly𝛼 gaseous halos (LAHs), whose origin is still under investigation. In this thesis, I make several contributions to improve the knowledge on these fields using samples of LAEs observed with the Multi Unit Spectroscopic Explorer (MUSE) at redshifts of 3 < 𝑧 < 6.},
  language  = {en}
}
@phdthesis{Philipp2023,
  author    = {Philipp, Mareike},
  title     = {Quantifier scope ambiguities in English, German, and Asante Twi (Akan): structural and pragmatic factors},
  doi       = {10.25932/publishup-61235},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-612356},
  school      = {Universit{\"a}t Potsdam},
  pages     = {ix, 291},
  year      = {2023},
  abstract  = {This thesis is concerned with the phenomenon of quantifier scope ambiguities. This phenomenon has been researched extensively, both from a theoretical and from an empirical point of view. Nevertheless, there are still a number of under-researched topics in the field of quantifier scope, which will be the main focus of this thesis. I will take a closer look at three languages, English, German, and the Asante Twi dialect of Akan (Kwa, Niger-Kongo). The goal is a better understanding of the phenomenon of quantifier scope both within each language, as well as from a cross-linguistic perspective. First, this thesis will provide a series of experiments that allow a direct cross-linguistic comparison between English and German - two languages about which specific claims have been made in the literature. I will also provide exploratory research in the case of Asante Twi, where so far, no work has been dedicated specifically to the study of quantifier scope. The work on Asante Twi will go beyond quantifier scope and also target the quantifier and determiner system in general. The question is not only if particular scope readings are possible or not, but also which factors contribute to an increase or decrease of scope availability, and if there are factors that block certain scope readings altogether. While some of the results confirm and thereby strengthen previous claims, other results contradict general assumptions in the literature. This is particularly the case for inverse readings in German and inverse readings across clause-boundaries.},
  language  = {en}
}
@phdthesis{Foerstner2023,
  author    = {F{\"o}rstner, Bernd Rainer},
  title     = {Transdiagnostic assessment of mental disorders using the Research Domain Criteria (RDoC) approach: relationship to disease severity},
  doi       = {10.25932/publishup-61115},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-611150},
  school      = {Universit{\"a}t Potsdam},
  year      = {2023},
  abstract  = {Traditionally, mental disorders have been identified based on specific symptoms and standardized diagnostic systems such as the DSM-5 and ICD-10. However, these symptom-based definitions may only partially represent neurobiological and behavioral research findings, which could impede the development of targeted treatments. A transdiagnostic approach to mental health research, such as the Research Domain Criteria (RDoC) approach, maps resilience and broader aspects of mental health to associated components. By investigating mental disorders in a transnosological way, we can better understand disease patterns and their distinguishing and common factors, leading to more precise prevention and treatment options. Therefore, this dissertation focuses on (1) the latent domain structure of the RDoC approach in a transnosological sample including healthy controls, (2) its domain associations to disease severity in patients with anxiety and depressive disorders, and (3) an overview of the scientific results found regarding Positive (PVS) and Negative Valence Systems (NVS) associated with mood and anxiety disorders. The following main results were found: First, the latent RDoC domain structure for PVS and NVS, Cognitive Systems (CS), and Social Processes (SP) could be validated using self-report and behavioral measures in a transnosological sample. Second, we found transdiagnostic and disease-specific associations between those four domains and disease severity in patients with depressive and anxiety disorders. Third, the scoping review showed a sizable amount of RDoC research conducted on PVS and NVS in mood and anxiety disorders, with research gaps for both domains and specific conditions. In conclusion, the research presented in this dissertation highlights the potential of the transnosological RDoC framework approach in improving our understanding of mental disorders. By exploring the latent RDoC structure and associations with disease severity and disease-specific and transnosological associations for anxiety and depressive disorders, this research provides valuable insights into the full spectrum of psychological functioning. Additionally, this dissertation highlights the need for further research in this area, identifying both RDoC indicators and research gaps. Overall, this dissertation represents an important contribution to the ongoing efforts to improve our understanding and the treatment of mental disorders, particularly within the commonly comorbid disease spectrum of mood and anxiety disorders.},
  language  = {en}
}
@phdthesis{IlićPetković2023,
  author    = {Ilić Petković, Nikoleta},
  title     = {Stars under influence: evidence of tidal interactions between stars and substellar companions},
  doi       = {10.25932/publishup-61597},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-615972},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xi, 137},
  year      = {2023},
  abstract  = {Tidal interactions occur between gravitationally bound astrophysical bodies. If their spatial separation is sufficiently small, the bodies can induce tides on each other, leading to angular momentum transfer and altering of evolutionary path the bodies would have followed if they were single objects. The tidal processes are well established in the Solar planet-moon systems and close stellar binary systems. However, how do stars behave if they are orbited by a substellar companion (e.g. a planet or a brown dwarf) on a tight orbit? Typically, a substellar companion inside the corotation radius of a star will migrate toward the star as it loses orbital angular momentum. On the other hand, the star will gain angular momentum which has the potential to increase its rotation rate. The effect should be more pronounced if the substellar companion is more massive. As the stellar rotation rate and the magnetic activity level are coupled, the star should appear more magnetically active under the tidal influence of the orbiting substellar companion. However, the difficulty in proving that a star has a higher magnetic activity level due to tidal interactions lies in the fact that (I) substellar companions around active stars are easier to detect if they are more massive, leading to a bias toward massive companions around active stars and mimicking the tidal interaction effect, and that (II) the age of a main-sequence star cannot be easily determined, leaving the possibility that a star is more active due to its young age. In our work, we overcome these issues by employing wide stellar binary systems where one star hosts a substellar companion, and where the other star provides the magnetic activity baseline for the host star, assuming they have coevolved, and thereby provides the host's activity level if tidal interactions have no effect on it. Firstly, we find that extrasolar planets can noticeably increase the host star's X-ray luminosity and that the effect is more pronounced if the exoplanet is at least Jupiter-like in mass and close to the star. Further, we find that a brown dwarf will have an even stronger effect, as expected, and that the X-ray surface flux difference between the host star and the wide stellar companion is a significant outlier when compared to a large sample of similar wide binary systems without any known substellar companions. This result proves that substellar hosting wide binary systems can be good tools to reveal the tidal effect on host stars, and also show that the typical stellar age indicators as activity or rotation cannot be used for these stars. Finally, knowing that the activity difference is a good tracer of the substellar companion's tidal impact, we develop an analytical method to calculate the modified tidal quality factor Q' of individual host stars, which defines the tidal dissipation efficiency in the convective envelope of a given main-sequence star.},
  language  = {en}
}
@phdthesis{Stanke2023,
  author    = {Stanke, Sandra},
  title     = {AC electrokinetic immobilization of influenza viruses and antibodies on nanoelectrode arrays for on-chip immunoassays},
  doi       = {10.25932/publishup-61716},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-617165},
  school      = {Universit{\"a}t Potsdam},
  pages     = {x, 115},
  year      = {2023},
  abstract  = {In the present thesis, AC electrokinetic forces, like dielectrophoresis and AC electroosmosis, were demonstrated as a simple and fast method to functionalize the surface of nanoelectrodes with submicrometer sized biological objects. These nanoelectrodes have a cylindrical shape with a diameter of 500 nm arranged in an array of 6256 electrodes. Due to its medical relevance influenza virus as well as anti-influenza antibodies were chosen as a model organism. Common methods to bring antibodies or proteins to biosensor surfaces are complex and time-consuming. In the present work, it was demonstrated that by applying AC electric fields influenza viruses and antibodies can be immobilized onto the nanoelectrodes within seconds without any prior chemical modification of neither the surface nor the immobilized biological object. The distribution of these immobilized objects is not uniform over the entire array, it exhibits a decreasing gradient from the outer row to the inner ones. Different causes for this gradient have been discussed, such as the vortex-shaped fluid motion above the nanoelectrodes generated by, among others, electrothermal fluid flow. It was demonstrated that parts of the accumulated material are permanently immobilized to the electrodes. This is a unique characteristic of the presented system since in the literature the AC electrokinetic immobilization is almost entirely presented as a method just for temporary immobilization. The spatial distribution of the immobilized viral material or the anti-influenza antibodies at the electrodes was observed by either the combination of fluorescence microscopy and deconvolution or by super-resolution microscopy (STED). On-chip immunoassays were performed to examine the suitability of the functionalized electrodes as a potential affinity-based biosensor. Two approaches were pursued: A) the influenza virus as the bio-receptor or B) the influenza virus as the analyte. Different sources of error were eliminated by ELISA and passivation experiments. Hence, the activity of the immobilized object was inspected by incubation with the analyte. This resulted in the successful detection of anti-influenza antibodies by the immobilized viral material. On the other hand, a detection of influenza virus particles by the immobilized anti-influenza antibodies was not possible. The latter might be due to lost activity or wrong orientation of the antibodies. Thus, further examinations on the activity of by AC electric fields immobilized antibodies should follow. When combined with microfluidics and an electrical read-out system, the functionalized chips possess the potential to serve as a rapid, portable, and cost-effective point-of-care (POC) device. This device can be utilized as a basis for diverse applications in diagnosing and treating influenza, as well as various other pathogens.},
  language  = {en}
}
@phdthesis{Kwarikunda2023,
  author    = {Kwarikunda, Diana},
  title     = {Interest, motivation, and learning strategies use during physics learning},
  doi       = {10.25932/publishup-60931},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-609311},
  school      = {Universit{\"a}t Potsdam},
  pages     = {viii, 221},
  year      = {2023},
  abstract  = {The purpose of this thesis was to investigate the developmental dynamics between interest, motivation, and learning strategy use during physics learning. The target population was lower secondary school students from a developing country, given that there is hardly in research that studies the above domain-specific concepts in the context of developing countries. The aim was addressed in four parts. The first part of the study was guided by three objectives: (a) to adapt and validate the Science Motivation Questionnaire (SMQ-II) for the Ugandan context; (b) to examine whether there are significant differences in motivation for learning Physics with respect to students' gender; and (c) to establish the extent to which students' interest predicts their motivation to learn Physics. Being a pilot study, the sample comprised 374 randomly selected students from five schools in central Uganda who responded to anonymous questionnaires that included scales from the SMQ-II and the Individual Interest Questionnaire. Data were analysed using confirmatory factor analyses, t-tests and structural equation modelling in SPSS-25 and Mplus-8. The five-factor model solution of the SMQ-II fitted adequately with the study data, with deletion of one item. The modified SMQ-II exhibited invariant factor loadings and intercepts (i.e., strong measurement invariance) when administered to boys and girls. Furthermore, on assessing whether motivation for learning Physics varied with gender, no significant differences were noted. On assessing the predictive effects of individual interest on students' motivation, individual interest significantly predicted all motivational constructs, with stronger predictive strength on students' self-efficacy and self-determination in learning Physics. In the second part whilst using comprised 934 Grade 9 students from eight secondary schools in Uganda, Latent profile analysis (LPA) - a person-centred approach was used to investigate motivation patterns that exist in lower secondary school students during physics learning. A three-step approach to LPA was used to answer three research questions: RQ1, which profiles of secondary school students exist with regards to their motivation for Physics learning; RQ2, are there differences in students' cognitive learning strategies in the identified profiles; and RQ3, does students' gender, attitudes, and individual interest predict membership in these profiles? Six motivational profiles were identified: (i) low-quantity motivation profile (101 students; 10.8\%); (ii) moderate-quantity motivation profile (246 students; 26.3\%); (iii) high-quantity motivation profile (365 students; 39.1\%); (iv) primarily intrinsically motivated profile (60 students,6.4\%); (v) mostly extrinsically motivated profile (88 students, 9.4\%); and (vi) grade-introjected profile (74 students, 7.9\%). Low-quantity and grade introjected motivated students mostly used surface learning strategies whilst the high-quantity and primarily intrinsically motivated students used deep learning strategies. On examining the predictive effect of gender, individual interest, and students' attitudes on the profile membership, unlike gender, individual interest and students' attitudes towards Physics learning strongly predicted profile membership. In the third part of the study, the occurrence of different secondary school learner profiles depending on their various combinations of cognitive and metacognitive learning strategy use, as well as their differences in perceived autonomy support, intrinsic motivation, and gender was examined. Data were collected from 576 9th grade student. Four learner profiles were identified: competent strategy user, struggling user, surface-level learner, and deep-level learner profiles. Gender differences were noted in students' use of elaboration and organization strategies to learn Physics, in favour of girls. In terms of profile memberships, significant differences in gender, intrinsic motivation and perceived autonomy support were also noted. Girls were 2.4 - 2.7 times more likely than boys to be members of the competent strategy user and surface-level learner profiles. Additionally, higher levels of intrinsic motivation predicted an increased likelihood membership into the deep-level learner profile, whilst higher levels of perceived teacher autonomy predicted an increased likelihood membership into the competent strategy user profile as compared to other profiles. Lastly, in the fourth part, changes in secondary school students' physics motivation and cognitive learning strategies use during physics learning across time were examined. Two waves of data were collected from initially 954 9th students through to their 10th grade. A three-step approach to Latent transition analysis was used. Generally, students' motivation decreased from 9th to 10th grade. Qualitative students' motivation profiles indicated strong with-in person stability whilst the quantitative profiles were relatively less stable. Mostly, students moved from the high quantity motivation profile to the extrinsically motivated profiles. On the other hand, the cognitive learning strategies use profiles were moderately stable; with higher with-in person stability in the deep-level learner profile. None of the struggling users and surface-level learners transitioned into the deep-level learners' profile. Additionally, students who perceived increased support for autonomy from their teachers had higher membership likelihood into the competent users' profiles whilst those with an increase in individual interest score had higher membership likelihood into the deep-level learner profile.},
  language  = {en}
}
@phdthesis{CamposdeAndrade2023,
  author    = {Campos de Andrade, Andr{\´e} Luiz},
  title     = {Governing climate change in Brazil},
  doi       = {10.25932/publishup-58733},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-587336},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xxvii, 272},
  year      = {2023},
  abstract  = {Enacted in 2009, the National Policy on Climate Change (PNMC) is a milestone in the institutionalisation of climate action in Brazil. It sets greenhouse gas (GHG) emission reduction targets and a set of principles and directives that are intended to lay the foundations for a cross-sectoral and multilevel climate policy in the country. However, after more than a decade since its establishment, the PNMC has experienced several obstacles related to its governance, such as coordination, planning and implementation issues. All of these issues pose threats to the effectiveness of GHG mitigation actions in the country. By looking at the intragovernmental and intergovernmental relationships that have taken place during the lifetime of the PNMC and its sectoral plans on agriculture (the Sectoral Plan for Mitigation and Adaptation to Climate Change for the Consolidation of a Low-Carbon Economy in Agriculture [ABC Plan]), transport and urban mobility (the Sectoral Plan for Transportation and Urban Mobility for Mitigation and Adaption of Climate Change [PSTM]), this exploratory qualitative research investigates the Brazilian climate change governance guided by the following relevant questions: how are climate policy arrangements organised and coordinated among governmental actors to mitigate GHG emissions in Brazil? What might be the reasons behind how such arrangements are established? What are the predominant governance gaps of the different GHG mitigation actions examined? Why do these governance gaps occur? Theoretically grounded in the literature on multilevel governance and coordination of public policies, this study employs a novel analytical framework that aims to identify and discuss the occurrence of four types of governance gaps (i.e. politics, institutions and processes, resources and information) in the three GHG mitigation actions (cases) examined (i.e. the PNMC, ABC Plan and PSTM). The research results are twofold. First, they reveal that Brazil has struggled to organise and coordinate governmental actors from different policy constituencies and different levels of government in the implementation of the GHG mitigation actions examined. Moreover, climate policymaking has mostly been influenced by the Ministry of Environment (MMA) overlooking the multilevel and cross-sectoral approaches required for a country's climate policy to mitigate and adapt to climate change, especially if it is considered an economy-wide Nationally Determined Contribution (NDC), as the Brazilian one is. Second, the study identifies a greater manifestation of gaps in politics (e.g. lack of political will in supporting climate action), institutions and processes (e.g. failures in the design of institutions and policy instruments, coordination and monitoring flaws, and difficulties in building climate federalism) in all cases studied. It also identifies that there have been important advances in the production of data and information for decision-making and, to a lesser extent, in the allocation of technical and financial resources in the cases studied; however, it is necessary to highlight the limitation of these improvements due to turf wars, a low willingness to share information among federal government players, a reduced volume of financial resources and an unequal distribution of capacities among the federal ministries and among the three levels of government. A relevant finding is that these gaps tend to be explained by a combination of general and sectoral set aspects. Regarding the general aspects, which are common to all cases examined, the following can be mentioned: i) unbalanced policy capabilities existing among the different levels of government, ii) a limited (bureaucratic) practice to produce a positive coordination mode within cross-sectoral policies, iii) the socioeconomic inequalities that affect the way different governments and economic sectors perceive the climate issue (selective perception) and iv) the reduced dialogue between national and subnational governments on the climate agenda (poor climate federalism). The following sectoral aspects can be mentioned: i) the presence of path dependencies that make the adoption of transformative actions harder and ii) the absence of perceived co-benefits that the climate agenda can bring to each economic sector (e.g. reputational gains, climate protection and access to climate financial markets). By addressing the theoretical and practical implications of the results, this research provides key insights to tackle the governance gaps identified and to help Brazil pave the way to achieving its NDCs and net-zero targets. At the theoretical level, this research and the current country's GHG emissions profile suggest that the Brazilian climate policy is embedded in a cross-sectoral and multilevel arena, which requires the effective involvement of different levels of political and bureaucratic powers and the consideration of the country's socioeconomic differences. Thus, the research argues that future improvements of the Brazilian climate policy and its governance setting must frame climate policy as an economic development agenda, the ramifications of which go beyond the environmental sector. An initial consequence of this new perspective may be a shift in the political and technical leadership from the MMA to the institutions of the centre of government (Executive Office of the President of Brazil) and those in charge of the country's economic policy (Ministry of Economy). This change could provide greater capacity for coordination, integration and enforcement as well as for addressing certain expected gaps (e.g. financial and technical resources). It could also lead to greater political prioritisation of the agenda at the highest levels of government. Moreover, this shift of the institutional locus could contribute to greater harmonisation between domestic development priorities and international climate politics. Finally, the research also suggests that this approach would reduce bureaucratic elitism currently in place due to climate policy being managed by Brazilian governmental institutions, which is still a theme of a few ministries and a reason for the occurrence of turf wars.},
  language  = {en}
}
@phdthesis{Leins2023,
  author    = {Leins, Johannes A.},
  title     = {Combining model detail with large scales},
  doi       = {10.25932/publishup-58283},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-582837},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xv, 168},
  year      = {2023},
  abstract  = {The global climate crisis is significantly contributing to changing ecosystems, loss of biodiversity and is putting numerous species on the verge of extinction. In principle, many species are able to adapt to changing conditions or shift their habitats to more suitable regions. However, change is progressing faster than some species can adjust, or potential adaptation is blocked and disrupted by direct and indirect human action. Unsustainable anthropogenic land use in particular is one of the driving factors, besides global heating, for these ecologically critical developments. Precisely because land use is anthropogenic, it is also a factor that could be quickly and immediately corrected by human action. In this thesis, I therefore assess the impact of three climate change scenarios of increasing intensity in combination with differently scheduled mowing regimes on the long-term development and dispersal success of insects in Northwest German grasslands. The large marsh grasshopper (LMG, Stethophyma grossum, Linn{\´e} 1758) is used as a species of reference for the analyses. It inhabits wet meadows and marshes and has a limited, yet fairly good ability to disperse. Mowing and climate conditions affect the development and mortality of the LMG differently depending on its life stage. The specifically developed simulation model HiLEG (High-resolution Large Environmental Gradient) serves as a tool for investigating and projecting viability and dispersal success under different climate conditions and land use scenarios. It is a spatially explicit, stage- and cohort-based model that can be individually configured to represent the life cycle and characteristics of terrestrial insect species, as well as high-resolution environmental data and the occurrence of external disturbances. HiLEG is a freely available and adjustable software that can be used to support conservation planning in cultivated grasslands. In the three case studies of this thesis, I explore various aspects related to the structure of simulation models per se, their importance in conservation planning in general, and insights regarding the LMG in particular. It became apparent that the detailed resolution of model processes and components is crucial to project the long-term effect of spatially and temporally confined events. Taking into account conservation measures at the regional level has further proven relevant, especially in light of the climate crisis. I found that the LMG is benefiting from global warming in principle, but continues to be constrained by harmful mowing regimes. Land use measures could, however, be adapted in such a way that they allow the expansion and establishment of the LMG without overly affecting agricultural yields. Overall, simulation models like HiLEG can make an important contribution and add value to conservation planning and policy-making. Properly used, simulation results shed light on aspects that might be overlooked by subjective judgment and the experience of individual stakeholders. Even though it is in the nature of models that they are subject to limitations and only represent fragments of reality, this should not keep stakeholders from using them, as long as these limitations are clearly communicated. Similar to HiLEG, models could further be designed in such a way that not only the parameterization can be adjusted as required, but also the implementation itself can be improved and changed as desired. This openness and flexibility should become more widespread in the development of simulation models.},
  language  = {en}
}
@phdthesis{Stuebler2023,
  author    = {St{\"u}bler, Sabine},
  title     = {Mathematical model of the mucosal immune response to study inflammatory bowel diseases and their treatments},
  doi       = {10.25932/publishup-61230},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-612301},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xiv, 194},
  year      = {2023},
  abstract  = {Inflammatory bowel diseases (IBD), characterised by a chronic inflammation of the gut wall, develop as consequence of an overreacting immune response to commensal bacteria, caused by a combination of genetic and environmental conditions. Large inter-individual differences in the outcome of currently available therapies complicate the decision for the best option for an individual patient. Predicting the prospects of therapeutic success for an individual patient is currently only possible to a limited extent; for this, a better understanding of possible differences between responders and non-responders is needed. In this thesis, we have developed a mathematical model describing the most important processes of the gut mucosal immune system on the cellular level. The model is based on literature data, which were on the one hand used (qualitatively) to choose which cell types and processes to incorporate and to derive the model structure, and on the other hand (quantitatively) to derive the parameter values. Using ordinary differential equations, it describes the concentration-time course of neutrophils, macrophages, dendritic cells, T cells and bacteria, each subdivided into different cell types and activation states, in the lamina propria and mesenteric lymph nodes. We evaluate the model by means of simulations of the healthy immune response to salmonella infection and mucosal injury. A virtual population includes IBD patients, which we define through their initially asymptomatic, but after a trigger chronically inflamed gut wall. We demonstrate the model's usefulness in different analyses: (i) The comparison of virtual IBD patients with virtual healthy individuals shows that the disease is elicited by many small or fewer large changes, and allows to make hypotheses about dispositions relevant for development of the disease. (ii) We simulate the effects of different therapeutic targets and make predictions about the therapeutic outcome based on the pre-treatment state. (iii) From the analysis of differences between virtual responders and non-responders, we derive hypotheses about reasons for the inter-individual variability in treatment outcome. (iv) For the example of anti-TNF-alpha therapy, we analyse, which alternative therapies are most promising in case of therapeutic failure, and which therapies are most suited for combination therapies: For drugs also directly targeting the cytokine levels or inhibiting the recruitment of innate immune cells, we predict a low probability of success when used as alternative treatment, but a large gain when used in a combination treatment. For drugs with direct effects on T cells, via modulation of the sphingosine-1-phosphate receptor or inhibition of T cell proliferation, we predict a considerably larger probability of success when used as alternative treatment, but only a small additional gain when used in a combination therapy.},
  language  = {en}
}
@phdthesis{CalderonQuinonez2023,
  author    = {Calder{\´o}n Qui{\~n}{\´o}nez, Ana Patricia},
  title     = {Ecology and conservation of the jaguar (Panthera onca) in Central America},
  doi       = {10.25932/publishup-61367},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-613671},
  school      = {Universit{\"a}t Potsdam},
  pages     = {140},
  year      = {2023},
  abstract  = {Conservation of the jaguar relies on holistic and transdisciplinary conservation strategies that integratively safeguard essential, connected habitats, sustain viable populations and their genetic exchange, and foster peaceful human-jaguar coexistence. These strategies define four research priorities to advance jaguar conservation throughout the species' range. In this thesis I provide several relevant ecological and sociological insights into these research priorities, each addressed in a separate chapter. I focus on the effects of anthropogenic landscapes on jaguar habitat use and population gene flow, spatial patterns of jaguar habitat suitability and functional population connectivity, and on innovative governance approaches which can work synergistically to help achieve human-wildlife conviviality. Furthermore, I translate these insights into recommendations for conservation practice by providing tools and suggestions that conservation managers and stakeholders can use to implement local actions but also make broad scale conservation decisions in Central America. In Chapter 2, I model regional habitat use of jaguars, producing spatially-explicit maps for management of key areas of habitat suitability. Using an occupancy model of 13-year-camera-trap occurrence data, I show that human influence has the strongest impact on jaguar habitat use, and that Jaguar Conservation Units are the most important reservoirs of high quality habitat in this region. I build upon these results by zooming in to an area of high habitat suitability loss in Chapter 3, northern Central America. Here I study the drivers of jaguar gene flow and I produce spatially-explicit maps for management of key areas of functional population connectivity in this region. I use microsatellite data and pseudo-optimized multiscale, multivariate resistance surfaces of gene flow to show that jaguar gene flow is influenced by environmental, and even more strongly, by human influence variables; and that the areas of lowest gene flow resistance largely coincide with the location of the Jaguar Conservation Units. Given that human activities significantly impact jaguar habitat use and gene flow, securing viable jaguar populations in anthropogenic landscapes also requires fostering peaceful human-wildlife coexistence. This is a complex challenge that cannot be met without transdisciplinary academic research and cross-sectoral, collaborative governance structures that effectively respond to the multiple challenges of such coexistence. With this in mind, I focus in Chapter 4 on carnivore conservation initiatives that apply transformative governance approaches to enact transformative change towards human-carnivore coexistence. Using the frameworks of transformative biodiversity governance and convivial conservation, I highlight in this chapter concrete pathways, supported by more inclusive, democratic forms of conservation decision-making and participation that promote truly transformative changes towards human-jaguar conviviality.},
  language  = {en}
}
@phdthesis{Kambasu2023,
  author    = {Kambasu, Obed},
  title     = {Attractiveness of government as an employer: The paradox of industrial action and public service attractiveness},
  doi       = {10.25932/publishup-57654},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-576542},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xiii, 182, xxxi},
  year      = {2023},
  abstract  = {This research investigated the relationship between frequent engagement in industrial action (also known as 'employee strikes') and the internal attractiveness of government employment. It focused on a special group of public employees: public university lecturers and public-school teachers in Uganda who frequently engaged in industrial action. At the very basic level, the research explored whether public employees frequently engaged in industrial action because they considered public service employment to be unattractive or whether frequent engagement in industrial action was in fact part of the attractiveness of government employment. Beyond exploring these relationships, it also explained why (or why not) such relationships existed. Methodologically, the research was conducted using an exploratory sequential design - a mixed methods study design that starts with a qualitative followed by a quantitative phase. It is the results of the initial qualitative phase that determined the direction of the subsequent quantitative phase. The qualitative phase started with an exploration of the relationship between industrial action and internal public service attractiveness, resulting into two specific research questions: 1) Why do public employees engage in industrial action and what role does frequent engagement in industrial action play in their perception of public service attractiveness? 2) Why and how is organizational justice related to public employees' perception of public service attractiveness? The above questions were answered both qualitatively and quantitatively. The theoretical postulations of the Social Movements Theories, Social Exchange Theory, and the Signaling Theory were used to structure the research assumptions and hypotheses. The results showed that public employees engaged in industrial action mostly because of relative, rather than absolute deprivation. An established culture of workplace militancy was also found to be key in actualizing industrial action as was the (perceived) absence of alternatives to achieve workplace justice. Importantly, there was a clear dichotomy between absolute working conditions and frequent engagement in industrial action. Frequent engagement in industrial action was itself found to have both positive and negative effects on internal public service attractiveness. It was also found that public service attractiveness from the perspective of current public employees might be different from what it is from the perspective of prospective employees. This is because current public employees do not assume what it feels like to work for government, but mostly use their day-to-day lived experiences to judge the attractiveness of their employer. The existing literature is particularly deficient on analyzing public service attractiveness from an internal perspective, which is surprising given the public sector's high reliance on internal recruitment. The research results underlined key implications for theory, practice, and research. At theory level, the results suggested that public employee ratings of internal public service attractiveness were heavily affected by halo effects and should therefore not be taken at face value. The complex workplace social exchanges which are deeply rooted in organizational justice and the 'personification metaphor' were also emphasized. From an empirical perspective, the results underlined the need to prioritize internal public service attractiveness as recent research has confirmed the value of family socialization and internal recommendations in making public sector employment attractive, even to external applicants. This research argues that the centrality of organizational justice in public sector employee relations requires public sector organizations to be intentional in their bid to create fair, just, and attractive workplaces. Beyond assessing the fairness of personnel policies, procedures, and interactional relationships, it is also important to prepare and equip public managers with the right skills to promote and practice justice in their day-to-day interactions with public employees, and to encourage, improve, and facilitate alternative public employee feedback mechanisms.},
  language  = {en}
}
@misc{ZaliReinKruegeretal.2023,
  author    = {Zali, Zahra and Rein, Teresa and Kr{\"u}ger, Frank and Ohrnberger, Matthias and Scherbaum, Frank},
  title     = {Ocean bottom seismometer (OBS) noise reduction from horizontal and vertical components using harmonic-percussive separation algorithms},
  series = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe},
  journal   = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe},
  number    = {1320},
  issn      = {1866-8372},
  doi       = {10.25932/publishup-58882},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-588828},
  pages     = {15},
  year      = {2023},
  abstract  = {Records from ocean bottom seismometers (OBSs) are highly contaminated by noise, which is much stronger compared to data from most land stations, especially on the horizontal components. As a consequence, the high energy of the oceanic noise at frequencies below 1 Hz considerably complicates the analysis of the teleseismic earthquake signals recorded by OBSs. Previous studies suggested different approaches to remove low-frequency noises from OBS recordings but mainly focused on the vertical component. The records of horizontal components, which are crucial for the application of many methods in passive seismological analysis of body and surface waves, could not be much improved in the teleseismic frequency band. Here we introduce a noise reduction method, which is derived from the harmonic-percussive separation algorithms used in Zali et al. (2021), in order to separate long-lasting narrowband signals from broadband transients in the OBS signal. This leads to significant noise reduction of OBS records on both the vertical and horizontal components and increases the earthquake signal-to-noise ratio (SNR) without distortion of the broadband earthquake waveforms. This is demonstrated through tests with synthetic data. Both SNR and cross-correlation coefficients showed significant improvements for different realistic noise realizations. The application of denoised signals in surface wave analysis and receiver functions is discussed through tests with synthetic and real data.},
  language  = {en}
}
@phdthesis{Elsaesser2023,
  author    = {Els{\"a}sser, Joshua Philipp},
  title     = {United Nations beyond the state? Interactions of intergovernmental treaty secretariats in global environmental governance},
  doi       = {10.25932/publishup-62165},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-621651},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xi, 204},
  year      = {2023},
  abstract  = {Within the context of United Nations (UN) environmental institutions, it has become apparent that intergovernmental responses alone have been insufficient for dealing with pressing transboundary environmental problems. Diverging economic and political interests, as well as broader changes in power dynamics and norms within global (environmental) governance, have resulted in negotiation and implementation efforts by UN member states becoming stuck in institutional gridlock and inertia. These developments have sparked a renewed debate among scholars and practitioners about an imminent crisis of multilateralism, accompanied by calls for reforming UN environmental institutions. However, with the rise of transnational actors and institutions, states are not the only relevant actors in global environmental governance. In fact, the fragmented architectures of different policy domains are populated by a hybrid mix of state and non-state actors, as well as intergovernmental and transnational institutions. Therefore, coping with the complex challenges posed by severe and ecologically interdependent transboundary environmental problems requires global cooperation and careful management from actors beyond national governments. This thesis investigates the interactions of three intergovernmental UN treaty secretariats in global environmental governance. These are the secretariats of the United Nations Framework Convention on Climate Change, the Convention on Biological Diversity, and the United Nations Convention to Combat Desertification. While previous research has acknowledged the increasing autonomy and influence of treaty secretariats in global policy-making, little attention has been paid to their strategic interactions with non-state actors, such as non-governmental organizations, civil society actors, businesses, and transnational institutions and networks, or their coordination with other UN agencies. Through qualitative case-study research, this thesis explores the means and mechanisms of these interactions and investigates their consequences for enhancing the effectiveness and coherence of institutional responses to underlying and interdependent environmental issues. Following a new institutionalist ontology, the conceptual and theoretical framework of this study draws on global governance research, regime theory, and scholarship on international bureaucracies. From an actor-centered perspective on institutional interplay, the thesis employs concepts such as orchestration and interplay management to assess the interactions of and among treaty secretariats. The research methodology involves structured, focused comparison, and process-tracing techniques to analyze empirical data from diverse sources, including official documents, various secondary materials, semi-structured interviews with secretariat staff and policymakers, and observations at intergovernmental conferences. The main findings of this research demonstrate that secretariats employ tailored orchestration styles to manage or bypass national governments, thereby raising global ambition levels for addressing transboundary environmental problems. Additionally, they engage in joint interplay management to facilitate information sharing, strategize activities, and mobilize relevant actors, thereby improving coherence across UN environmental institutions. Treaty secretariats play a substantial role in influencing discourses and knowledge exchange with a wide range of actors. However, they face barriers, such as limited resources, mandates, varying leadership priorities, and degrees of politicization within institutional processes, which may hinder their impact. Nevertheless, the secretariats, together with non-state actors, have made progress in advancing norm-building processes, integrated policy-making, capacity building, and implementation efforts within and across framework conventions. Moreover, they utilize innovative means of coordination with actors beyond national governments, such as data-driven governance, to provide policy-relevant information for achieving overarching governance targets. Importantly, this research highlights the growing interactions between treaty secretariats and non-state actors, which not only shape policy outcomes but also have broader implications for the polity and politics of international institutions. The findings offer opportunities for rethinking collective agency and actor dynamics within UN entities, addressing gaps in institutionalist theory concerning the interaction of actors in inter-institutional spaces. Furthermore, the study addresses emerging challenges and trends in global environmental governance that are pertinent to future policy-making. These include reflections for the debate on reforming international institutions, the role of emerging powers in a changing international world order, and the convergence of public and private authority through new alliance-building and a division of labor between international bureaucracies and non-state actors in global environmental governance.},
  language  = {en}
}
@phdthesis{Pan2023,
  author    = {Pan, Xuefeng},
  title     = {Soft-template directed functional composite nanomaterials},
  doi       = {10.25932/publishup-61270},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-612709},
  school      = {Universit{\"a}t Potsdam},
  pages     = {VI, 185},
  year      = {2023},
  abstract  = {Soft-template strategy enables the fabrication of composite nanomaterials with desired functionalities and structures. In this thesis, soft templates, including poly(ionic liquid) nanovesicles (PIL NVs), self-assembled polystyrene-b-poly(2-vinylpyridine) (PS-b-P2VP) particles, and glycopeptide (GP) biomolecules have been applied for the synthesis of versatile composite particles of PILs/Cu, molybdenum disulfide/carbon (MoS2/C), and GP-carbon nanotubes-metal (GP-CNTs-metal) composites, respectively. Subsequently, their possible applications as efficient catalysts in two representative reactions, i.e. CO2 electroreduction (CO2ER) and reduction of 4-nitrophenol (4-NP), have been studied, respectively. In the first work, PIL NVs with a tunable particle size of 50 to 120 nm and a shell thickness of 15 to 60 nm have been prepared via one-step free radical polymerization. By increasing monomer concentration for polymerization, their nanoscopic morphology can evolve from hollow NVs to dense spheres, and finally to directional worms, in which a multi-lamellar packing of PIL chains occurred in all samples. The obtained PIL NVs with varied shell thickness have been in situ functionalized with ultra-small Cu nanoparticles (Cu NPs, 1-3 nm) and subsequently employed as the electrocatalysts for CO2ER. The hollow PILs/Cu composite catalysts exhibit a 2.5-fold enhancement in selectivity towards C1 products compared to the pristine Cu NPs. This enhancement is primarily attributed to the strong electronic interactions between the Cu NPs and the surface functionalities of PIL NVs. This study casts new aspects on using nanostructured PILs as novel electrocatalyst supports in efficient CO2 conversion. In the second work, a novel approach towards fast degradation of 4-NP has been developed using porous MoS2/C particles as catalysts, which integrate the intrinsically catalytic property of MoS2 with its photothermal conversion capability. Various MoS2/C composite particles have been prepared using assembled PS-b-P2VP block copolymer particles as sacrificed soft templates. Intriguingly, the MoS2/C particles exhibit tailored morphologies including pomegranate-like, hollow, and open porous structures. Subsequently, the photothermal conversion performance of these featured particles has been compared under near infrared (NIR) light irradiation. When employing the open porous MoS2/C particles as the catalyst for the reduction of 4-NP, the reaction rate constant has increased by 1.5-fold under light illumination. This catalytic enhancement mainly results from the open porous architecture and photothermal conversion performance of the MoS2 particles. This proposed strategy offers new opportunities for efficient photothermal-assisted catalysis. In the third work, a facile and green approach towards the fabrication of GP-CNTs-metal composites has been proposed, which utilizes a versatile GP biomolecule both as a stabilizer for CNTs in water and as a reducing agent for noble metal ions. The abundant hydrogen bonds in GP molecules bestow the formed GP-CNTs with excellent plasticity, enabling the availability of polymorphic CNTs species ranging from dispersion to viscous paste, gel, and even dough by increasing their concentration. The GP molecules can reduce metal precursors at room temperature without additional reducing agents, enabling the in situ immobilization of metal NPs (e.g. Au, Ag, and Pd) on the CNTs surface. The combination of excellent catalytic property of Pd NPs with photothermal conversion capability of CNTs makes the GP-CNTs-Pd composite a promising catalyst for the efficient degradation of 4-NP. The obtained composite displays a 1.6-fold increase in conversion under NIR light illumination in the reduction of 4-NP, mainly owing to the strong light-to-heat conversion effect of CNTs. Overall, the proposed method opens a new avenue for the synthesis of CNTs composite as a sustainable and versatile catalyst platform. The results presented in the current thesis demonstrate the significance of using soft templates for the synthesis of versatile composites with tailored nanostructure and functionalities. The investigation of these composite nanomaterials in the catalytic reactions reveals their potential in the development of desired catalysts for emerging catalytic processes, e.g. photothermal-assisted catalysis and electrocatalysis.},
  language  = {en}
}
@article{CohenHattab2023,
  author    = {Cohen-Hattab, Kobi},
  title     = {Pioneers of Independent Jewish Shipping},
  series = {PaRDeS : Journal of the Association for Jewish Studies in Germany},
  journal   = {PaRDeS : Journal of the Association for Jewish Studies in Germany},
  number    = {28},
  publisher = {Universit{\"a}tsverlag Potsdam},
  address   = {Potsdam},
  isbn      = {978-3-86956-552-1},
  issn      = {1614-6492},
  doi       = {10.25932/publishup-58554},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-585542},
  pages     = {34 -- 50},
  year      = {2023},
  abstract  = {The birth of the Yishuv's national shipping company, ZIM was preceded by private enterprise; the sea had not traditionally been a focus of the Zionist movement. In the 1930s, a five-year span of private commercial shipping saw three companies in the Jewish community in Palestine - Palestine Shipping Company, Palestine Maritime Lloyd, and Atid - before shipping was cut short by the outbreak of the Second World War. Despite their brief lifespans and their negligible contribution to general shipping, these companies constituted an important milestone. Their existence helped shift the Yishuv leadership's attitudes about shipping's importance for the community and the need for it to be supported by national institutions.},
  language  = {en}
}
@article{Weinmann2023,
  author    = {Weinmann, Franziska},
  title     = {Mothers of Seafaring},
  series = {PaRDeS : Journal of the Association for Jewish Studies in Germany},
  journal   = {PaRDeS : Journal of the Association for Jewish Studies in Germany},
  number    = {28},
  publisher = {Universit{\"a}tsverlag Potsdam},
  address   = {Potsdam},
  isbn      = {978-3-86956-552-1},
  issn      = {1614-6492},
  doi       = {10.25932/publishup-58556},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-585563},
  pages     = {52 -- 67},
  year      = {2023},
  abstract  = {The article aims to trace the contribution of Jewish women in the Yishuv's maritime history. Taking the example of Henrietta Diamond, a founding member and chairperson of the Zebulun Seafaring Society, the article seeks to explore the representation and role of women in a growing Jewish maritime domain from the 1930s to the 1950s. It examines Zionist narratives on the 'New Jew' and the Jewish body and studies their relevance for the emerging field of maritime activities in the Yishuv. By contextualizing the work and depiction of Henrietta Diamond, the article sheds new light on the gendered notions that underlay the emergence of the Jewish maritime domain and illustrates the patterns of inclusion and exclusion in it.},
  language  = {en}
}
@phdthesis{Malchow2023,
  author    = {Malchow, Anne-Kathleen},
  title     = {Developing an integrated platform for predicting niche and range dynamics},
  doi       = {10.25932/publishup-60273},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-602737},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xiv, 169},
  year      = {2023},
  abstract  = {Species are adapted to the environment they live in. Today, most environments are subjected to rapid global changes induced by human activity, most prominently land cover and climate changes. Such transformations can cause adjustments or disruptions in various eco-evolutionary processes. The repercussions of this can appear at the population level as shifted ranges and altered abundance patterns. This is where global change effects on species are usually detected first. To understand how eco-evolutionary processes act and interact to generate patterns of range and abundance and how these processes themselves are influenced by environmental conditions, spatially-explicit models provide effective tools. They estimate a species' niche as the set of environmental conditions in which it can persist. However, the currently most commonly used models rely on static correlative associations that are established between a set of spatial predictors and observed species distributions. For this, they assume stationary conditions and are therefore unsuitable in contexts of global change. Better equipped are process-based models that explicitly implement algorithmic representations of eco-evolutionary mechanisms and evaluate their joint dynamics. These models have long been regarded as difficult to parameterise, but an increased data availability and improved methods for data integration lessen this challenge. Hence, the goal of this thesis is to further develop process-based models, integrate them into a complete modelling workflow, and provide the tools and guidance for their successful application. With my thesis, I presented an integrated platform for spatially-explicit eco-evolutionary modelling and provided a workflow for their inverse calibration to observational data. In the first chapter, I introduced RangeShiftR, a software tool that implements an individual-based modelling platform for the statistical programming language R. Its open-source licensing, extensive help pages and available tutorials make it accessible to a wide audience. In the second chapter, I demonstrated a comprehensive workflow for the specification, calibration and validation of RangeShiftR by the example of the red kite in Switzerland. The integration of heterogeneous data sources, such as literature and monitoring data, allowed to successfully calibrate the model. It was then used to make validated, spatio-temporal predictions of future red kite abundance. The presented workflow can be adopted to any study species if data is available. In the third chapter, I extended RangeShiftR to directly link demographic processes to climatic predictors. This allowed me to explore the climate-change responses of eight Swiss breeding birds in more detail. Specifically, the model could identify the most influential climatic predictors, delineate areas of projected demographic suitability, and attribute current population trends to contemporary climate change. My work shows that the application of complex, process-based models in conservation-relevant contexts is feasible, utilising available tools and data. Such models can be successfully calibrated and outperform other currently used modelling approaches in terms of predictive accuracy. Their projections can be used to predict future abundances or to assess alternative conservation scenarios. They further improve our mechanistic understanding of niche and range dynamics under climate change. However, only fully mechanistic models, that include all relevant processes, allow to precisely disentangle the effects of single processes on observed abundances. In this respect, the RangeShiftR model still has potential for further extensions that implement missing influential processes, such as species interactions. Dynamic, process-based models are needed to adequately model a dynamic reality. My work contributes towards the advancement, integration and dissemination of such models. This will facilitate numeric, model-based approaches for species assessments, generate ecological insights and strengthen the reliability of predictions on large spatial scales under changing conditions.},
  language  = {en}
}
@phdthesis{Shekhar2023,
  author    = {Shekhar, Sumit},
  title     = {Image and video processing based on intrinsic attributes},
  doi       = {10.25932/publishup-62004},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-620049},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xii, 143},
  year      = {2023},
  abstract  = {Advancements in computer vision techniques driven by machine learning have facilitated robust and efficient estimation of attributes such as depth, optical flow, albedo, and shading. To encapsulate all such underlying properties associated with images and videos, we evolve the concept of intrinsic images towards intrinsic attributes. Further, rapid hardware growth in the form of high-quality smartphone cameras, readily available depth sensors, mobile GPUs, or dedicated neural processing units have made image and video processing pervasive. In this thesis, we explore the synergies between the above two advancements and propose novel image and video processing techniques and systems based on them. To begin with, we investigate intrinsic image decomposition approaches and analyze how they can be implemented on mobile devices. We propose an approach that considers not only diffuse reflection but also specular reflection; it allows us to decompose an image into specularity, albedo, and shading on a resource constrained system (e.g., smartphones or tablets) using the depth data provided by the built-in depth sensors. In addition, we explore how on-device depth data can further be used to add an immersive dimension to 2D photos, e.g., showcasing parallax effects via 3D photography. In this regard, we develop a novel system for interactive 3D photo generation and stylization on mobile devices. Further, we investigate how adaptive manipulation of baseline-albedo (i.e., chromaticity) can be used for efficient visual enhancement under low-lighting conditions. The proposed technique allows for interactive editing of enhancement settings while achieving improved quality and performance. We analyze the inherent optical flow and temporal noise as intrinsic properties of a video. We further propose two new techniques for applying the above intrinsic attributes for the purpose of consistent video filtering. To this end, we investigate how to remove temporal inconsistencies perceived as flickering artifacts. One of the techniques does not require costly optical flow estimation, while both provide interactive consistency control. Using intrinsic attributes for image and video processing enables new solutions for mobile devices - a pervasive visual computing device - and will facilitate novel applications for Augmented Reality (AR), 3D photography, and video stylization. The proposed low-light enhancement techniques can also improve the accuracy of high-level computer vision tasks (e.g., face detection) under low-light conditions. Finally, our approach for consistent video filtering can extend a wide range of image-based processing for videos.},
  language  = {en}
}
@masterthesis{Eggers2023,
  type      = {Bachelor Thesis},
  author    = {Eggers, Nele},
  title     = {Properties of Arctic aerosol in the transition between Arctic haze to summer season derived by lidar},
  doi       = {10.25932/publishup-61943},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-619438},
  school      = {Universit{\"a}t Potsdam},
  pages     = {x, 63},
  year      = {2023},
  abstract  = {During the Arctic haze period, the Arctic troposphere consists of larger, yet fewer, aerosol particles than during the summer (Tunved et al., 2013; Quinn et al., 2007). Interannual variability (Graßl and Ritter, 2019; Rinke et al., 2004), as well as unknown origins (Stock et al., 2014) and properties of aerosol complicate modeling these annual aerosol cycles. This thesis investigates the modification of the microphysical properties of Arctic aerosols in the transition from Arctic haze to the summer season. Therefore, lidar measurements of Ny-{\AA}lesund from April 2021 to the end of July 2021 are evaluated based on the aerosols' optical properties. An overview of those properties will be provided. Furthermore, parallel radiosonde data is considered for indication of hygroscopic growth. The annual aerosol cycle in 2021 differs from expectations based on previous studies from Tunved et al. (2013) and Quinn et al. (2007). Developments of backscatter, extinction, aerosol depolarisation, lidar ratio and color ratio show a return of the Arctic haze in May. The haze had already reduced in April, but regrew afterwards. The average Arctic aerosol displays hygroscopic behaviour, meaning growth due to water uptake. To determine such a behaviour is generally laborious because various meteorological circumstances need to be considered. Two case studies provide further information on these possible events. In particular, a day with a rare ice cloud and with highly variable water cloud layers is observed.},
  language  = {en}
}
@phdthesis{Metzger2023,
  author    = {Metzger, Sabrina},
  title     = {Neotectonic deformation over space and time as observed by space-based geodesy},
  doi       = {10.25932/publishup-59922},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-599225},
  school      = {Universit{\"a}t Potsdam},
  pages     = {V, 217},
  year      = {2023},
  abstract  = {Alfred Wegeners ideas on continental drift were doubted for several decades until the discovery of polarization changes at the Atlantic seafloor and the seismic catalogs imaging oceanic subduction underneath the continental crust (Wadati-Benioff Zone). It took another 20 years until plate motion could be directly observed and quantified by using space geodesy. Since then, it is unthinkable to do neotectonic research without the use of satellite-based methods. Thanks to a tremendeous increase of instrumental observations in space and time over the last decades we significantly increased our knowledge on the complexity of the seismic cycle, that is, the interplay of tectonic stress build up and release. Our classical assumption, earthquakes were the only significant phenomena of strain release previously accumulated in a linear fashion, is outdated. We now know that this concept is actually decorated with a wide range of slow and fast processes such as triggered slip, afterslip, post-seismic and visco-elastic relaxation of the lower crust, dynamic pore-pressure changes in the elastic crust, aseismic creep, slow slip events and seismic swarms. On the basis of eleven peer-reviewed papers studies I here present the diversity of crustal deformation processes. Based on time-series analyses of radar imagery and satellited-based positioning data I quantify tectonic surface deformation and use numerical and analytical models and independent geologic and seismologic data to better understand the underlying crustal processes. The main part of my work focuses on the deformation observed in the Pamir, the Hindu Kush and the Tian Shan that together build the highly active continental collision zone between Northwest-India and Eurasia. Centered around the Sarez earthquake that ruptured the center of the Pamir in 2015 I present diverse examples of crustal deformation phenomena. Driver of the deformation is the Indian indenter, bulldozing into the Pamir, compressing the orogen that then collapses westward into the Tajik depression. A second natural observatory of mine to study tectonic deformation is the oceanic subduction zone in Chile that repeatedly hosts large earthquakes of magnitude 8 and more. These are best to study post-seismic relaxation processes and coupling of large earthquake. My findings nicely illustrate how complex fashion and how much the different deformation phenomena are coupled in space and time. My publications contribute to the awareness that the classical concept of the seismic cycle needs to be revised, which, in turn, has a large influence in the classical, probabilistic seismic hazard assessment that primarily relies on statistically solid recurrence times.},
  language  = {en}
}
@phdthesis{Pons2023,
  author    = {Pons, Micha{\"e}l},
  title     = {The Nature of the tectonic shortening in Central Andes},
  doi       = {10.25932/publishup-60089},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-600892},
  school      = {Universit{\"a}t Potsdam},
  pages     = {160},
  year      = {2023},
  abstract  = {The Andean Cordillera is a mountain range located at the western South American margin and is part of the Eastern- Circum-Pacific orogenic Belt. The ~7000 km long mountain range is one of the longest on Earth and hosts the second largest orogenic plateau in the world, the Altiplano-Puna plateau. The Andes are known as a non-collisional subduction-type orogen which developed as a result of the interaction between the subducted oceanic Nazca plate and the South American continental plate. The different Andean segments exhibit along-strike variations of morphotectonic provinces characterized by different elevations, volcanic activity, deformation styles, crustal thickness, shortening magnitude and oceanic plate geometry. Most of the present-day elevation can be explained by crustal shortening in the last ~50 Ma, with the shortening magnitude decreasing from ~300 km in the central (15°S-30°S) segment to less than half that in the southern part (30°S-40°S). Several factors were proposed that might control the magnitude and acceleration of shortening of the Central Andes in the last 15 Ma. One important factor is likely the slab geometry. At 27-33°S, the slab dips horizontally at ~100 km depth due to the subduction of the buoyant Juan Fernandez Ridge, forming the Pampean flat-slab. This horizontal subduction is thought to influence the thermo-mechanical state of the Sierras Pampeanas foreland, for instance, by strengthening the lithosphere and promoting the thick-skinned propagation of deformation to the east, resulting in the uplift of the Sierras Pampeanas basement blocks. The flat-slab has migrated southwards from the Altiplano latitude at ~30 Ma to its present-day position and the processes and consequences associated to its passage on the contemporaneous acceleration of the shortening rate in Central Andes remain unclear. Although the passage of the flat-slab could offer an explanation to the acceleration of the shortening, the timing does not explain the two pulses of shortening at about 15 Ma and 4 Ma that are suggested from geological observations. I hypothesize that deformation in the Central Andes is controlled by a complex interaction between the subduction dynamics of the Nazca plate and the dynamic strengthening and weakening of the South American plate due to several upper plate processes. To test this hypothesis, a detailed investigation into the role of the flat-slab, the structural inheritance of the continental plate, and the subduction dynamics in the Andes is needed. Therefore, I have built two classes of numerical thermo-mechanical models: (i) The first class of models are a series of generic E-W-oriented high-resolution 2D subduction models thatinclude flat subduction in order to investigate the role of the subduction dynamics on the temporal variability of the shortening rate in the Central Andes at Altiplano latitudes (~21°S). The shortening rate from the models was then validated with the observed tectonic shortening rate in the Central Andes. (ii) The second class of models are a series of 3D data-driven models of the present-day Pampean flat-slab configuration and the Sierras Pampeanas (26-42°S). The models aim to investigate the relative contribution of the present-day flat subduction and inherited structures in the continental lithosphere on the strain localization. Both model classes were built using the advanced finite element geodynamic code ASPECT. The first main finding of this work is to suggest that the temporal variability of shortening in the Central Andes is primarily controlled by the subduction dynamics of the Nazca plate while it penetrates into the mantle transition zone. These dynamics depends on the westward velocity of the South American plate that provides the main crustal shortening force to the Andes and forces the trench to retreat. When the subducting plate reaches the lower mantle, it buckles on it-self until the forced trench retreat causes the slab to steepen in the upper mantle in contrast with the classical slab-anchoring model. The steepening of the slab hinders the trench causing it to resist the advancing South American plate, resulting in the pulsatile shortening. This buckling and steepening subduction regime could have been initiated because of the overall decrease in the westwards velocity of the South American plate. In addition, the passage of the flat-slab is required to promote the shortening of the continental plate because flat subduction scrapes the mantle lithosphere, thus weakening the continental plate. This process contributes to the efficient shortening when the trench is hindered, followed by mantle lithosphere delamination at ~20 Ma. Finally, the underthrusting of the Brazilian cratonic shield beneath the orogen occurs at ~11 Ma due to the mechanical weakening of the thick sediments covered the shield margin, and due to the decreasing resistance of the weakened lithosphere of the orogen. The second main finding of this work is to suggest that the cold flat-slab strengthens the overriding continental lithosphere and prevents strain localization. Therefore, the deformation is transmitted to the eastern front of the flat-slab segment by the shear stress operating at the subduction interface, thus the flat-slab acts like an indenter that "bulldozes" the mantle-keel of the continental lithosphere. The offset in the propagation of deformation to the east between the flat and steeper slab segments in the south causes the formation of a transpressive dextral shear zone. Here, inherited faults of past tectonic events are reactivated and further localize the deformation in an en-echelon strike-slip shear zone, through a mechanism that I refer to as "flat-slab conveyor". Specifically, the shallowing of the flat-slab causes the lateral deformation, which explains the timing of multiple geological events preceding the arrival of the flat-slab at 33°S. These include the onset of the compression and of the transition between thin to thick-skinned deformation styles resulting from the crustal contraction of the crust in the Sierras Pampeanas some 10 and 6 Myr before the Juan Fernandez Ridge collision at that latitude, respectively.},
  language  = {en}
}
@phdthesis{Markov2023,
  author    = {Markov, Adrian},
  title     = {Acute effects of exercise order in concurrent training on immunological stress responses and measures of muscular fitness in youth athletes of both sexes},
  doi       = {10.25932/publishup-61851},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-618517},
  school      = {Universit{\"a}t Potsdam},
  pages     = {X, 81},
  year      = {2023},
  abstract  = {Background and aims: To succeed in competition, elite team and individual athletes often seek the development of both, high levels of muscle strength and power as well as cardiorespiratory endurance. In this context, concurrent training (CT) is a commonly applied and effective training approach. While being exposed to high training loads, youth athletes (≤ 18 years) are yet underrepresented in the scientific literature. Besides, immunological responses to CT have received little attention. Therefore, the aims of this work were to examine the acute (< 15min) and delayed (≥ 6 hours) effects of dif-ferent exercise order in CT on immunological stress responses, muscular fitness, metabolic response, and rating of perceived exertion (RPE) in highly trained youth male and female judo athletes. Methods: A total of twenty male and thirteen female participants, with an average age of 16 ± 1.8 years and 14.4 ± 2.1 years, respectively, were included in the study. They were randomly assigned to two CT sessions; power-endurance versus endurance-power (i.e., study 1), or strength-endurance versus endurance-strength (i.e., study 2). Markers of immune response (i.e., white-blood-cells, granulocytes, lymphocytes, mon-ocytes, and lymphocytes, granulocyte-lymphocyte-ratio, and systemic-inflammation-index), muscular fitness (i.e., counter-movement jump [CMJ]), metabolic responses (i.e., blood lactate, glucose), and RPE were collected at different time points (i.e., PRE12H, PRE, MID, POST, POST6H, POST22H). Results (study 1): There were significant time*order interactions for white-blood-cells, lymphocytes, granulocytes, monocytes, granulocyte-lymphocyte-ratio, and systemic-inflammation-index. The power-endurance order resulted in significantly larger PRE-to-POST increases in white-blood-cells, monocytes, and lymphocytes while the endur-ance-power order resulted in significantly larger PRE-to-POST increases in the granu-locyte-lymphocyte-ratio and systemic-inflammation-index. Likewise, significantly larger increases from PRE-to-POST6H in white-blood-cells and granulocytes were observed following the power-endurance order compared to endurance-power. All markers of immune response returned toward baseline values at POST22H. Moreover, there was a significant time*order interaction for blood glucose and lactate. Following the endur-ance-power order, blood lactate and glucose increased from PRE-to-MID but not from PRE-to-POST. Meanwhile, in the power-endurance order blood lactate and glucose increased from PRE-to-POST but not from PRE-to-MID. A significant time*order inter-action was observed for CMJ-force with larger PRE-to-POST decreases in the endur-ance-power order compared to power-endurance order. Further, CMJ-power showed larger PRE-to-MID performance decreases following the power-endurance order, com-pared to the endurance-power order. Regarding RPE, significant time*order interactions were noted with larger PRE-to-MID values following the endurance-power order and larger PRE-to-POST values following the power-endurance order. Results (study 2): There were significant time*order interactions for lymphocytes, monocytes, granulocyte-lymphocyte-ratio, and systemic-inflammation-index. The strength-endurance order resulted in significantly larger PRE-to-POST increases in lymphocytes while the endurance-strength order resulted in significantly larger PRE-to-POST increases in the granulocyte-lymphocyte-ratio and systemic-inflammation-index. All markers of the immune system returned toward baseline values at POST22H. Moreover, there was a significant time*order interaction for blood glucose and lactate. From PRE-to-MID, there was a significantly greater increase in blood lactate and glu-cose following the endurance-strength order compared to strength-endurance order. Meanwhile, from PRE-to-POST there was a significantly higher increase in blood glu-cose following the strength-endurance order compared to endurance-strength order. Regarding physical fitness, a significant time*order interaction was observed for CMJ-force and CMJ-power with larger PRE-to-MID increases following the endurance-strength order compared to the strength-endurance order. For RPE, significant time*order interactions were noted with larger PRE-to-MID values following the endur-ance-power order and larger PRE-to-POST values following the power-endurance or-der. Conclusions: The primary findings from both studies revealed order-dependent effects on immune responses. In male youth judo athletes, the results demonstrated greater immunological stress responses, both immediately (≤ 15 min) and delayed (≥ 6 hours), following the power-endurance order compared to the endurance-power order. For female youth judo athletes, the results indicated higher acute, but not delayed, order-dependent changes in immune responses following the strength-endurance order compared to the endurance-strength order. It is worth noting that in both studies, all markers of immune system response returned to baseline levels within 22 hours. This suggests that successful recovery from the exercise-induced immune stress response was achieved within 22 hours. Regarding metabolic responses, physical fitness, and perceived exertion, the findings from both studies indicated acute (≤ 15 minutes) alterations that were dependent on the exercise order. These alterations were primarily influ-enced by the endurance exercise component. Moreover, study 1 provided substantial evidence suggesting that internal load measures, such as immune markers, may differ from external load measures. This indicates a disparity between immunological, perceived, and physical responses following both concurrent training orders. Therefore, it is crucial for practitioners to acknowledge these differences and take them into consideration when designing training programs.},
  language  = {en}
}
@misc{TimmeBrandRaboldt2023,
  author    = {Timme, Sinika and Brand, Ralf and Raboldt, Michaela},
  title     = {Exercise or not?},
  series = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Humanwissenschaftliche Reihe},
  journal   = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Humanwissenschaftliche Reihe},
  number    = {834},
  issn      = {1866-8364},
  doi       = {10.25932/publishup-58863},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-588638},
  pages     = {10},
  year      = {2023},
  abstract  = {Objective: Individuals' decisions to engage in exercise are often the result of in-the-moment choices between exercise and a competing behavioral alternative. The purpose of this study was to investigate processes that occur in-the-moment (i.e., situated processes) when individuals are faced with the choice between exercise and a behavioral alternative during a computerized task. These were analyzed against the background of interindividual differences in individuals' automatic valuation and controlled evaluation of exercise. Method: In a behavioral alternatives task 101 participants were asked whether they would rather choose an exercise option or a behavioral alternative in 25 trials. Participants' gaze behavior (first gaze and fixations) was recorded using eye-tracking. An exercise-specific affect misattribution procedure (AMP) was used to assess participants' automatic valuation of exercise before the task. After the task, self-reported feelings towards exercise (controlled evaluation) and usual weekly exercise volume were assessed. Mixed effects models with random effects for subjects and trials were used for data analysis. Results: Choosing exercise was positively correlated with individuals' automatic valuation (r = 0.20, p = 0.05), controlled evaluation (r = 0.58, p < 0.001), and their weekly exercise volume (r = 0.43, p < 0.001). Participants showed no bias in their initial gaze or number of fixations towards the exercise or the non-exercise alternative. However, participants were 1.30 times more likely to fixate on the chosen alternative first and more frequently, but this gaze behavior was not related to individuals' automatic valuation, controlled evaluation, or weekly exercise volume. Conclusion: The results suggest that situated processes arising from defined behavioral alternatives may be independent of individuals' general preferences. Despite one's best general intention to exercise more, the choice of a non-exercise alternative behavior may seem more appealing in-the-moment and eventually be chosen. New psychological theories of health behavior change should therefore better consider the role of potentially conflicting alternatives when it comes to initiating physical activity or exercise.},
  language  = {en}
}
@phdthesis{Gruner2023,
  author    = {Gruner, David},
  title     = {New frontiers in gyrochronology},
  doi       = {10.25932/publishup-61526},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-615268},
  school      = {Universit{\"a}t Potsdam},
  pages     = {x, 131},
  year      = {2023},
  abstract  = {Late-type stars are by far the most frequent stars in the universe and of fundamental interest to various fields of astronomy - most notably to Galactic archaeology and exoplanet research. However, such stars barely change during their main sequence lifetime; their temperature, luminosity, or chemical composition evolve only very slowly over the course of billions of years. As such, it is difficult to obtain the age of such a star, especially when it is isolated and no other indications (like cluster association) can be used. Gyrochronology offers a way to overcome this problem. Stars, just like all other objects in the universe, rotate and the rate at which stars rotate impacts many aspects of their appearance and evolution. Gyrochronology leverages the observed rotation rate of a late-type main sequence star and its systematic evolution to estimate their ages. Unlike the above-mentioned parameters, the rotation rate of a main sequence star changes drastically throughout its main sequence lifetime; stars spin down. The youngest stars rotate every few hours, whereas much older stars rotate only about once a month, or - in the case of some late M-stars - once in a hundred days. Given that this spindown is systematic (with an additional mass dependence), it gave rise to the idea of using the observed rotation rate of a star (and its mass or a suitable proxy thereof) to estimate a star's age. This has been explored widely in young stellar open clusters but remains essentially unconstrained for stars older than the sun, and K and M stars older than 1 Gyr. This thesis focuses on the continued exploration of the spindown behavior to assess, whether gyrochronology remains applicable for stars of old ages, whether it is universal for late-type main sequence stars (including field stars), and to provide calibration mileposts for spindown models. To accomplish this, I have analyzed data from Kepler space telescope for the open clusters Ruprecht 147 (2.7 Gyr old) and M 67 (4 Gyr). Time series photometry data (light curves) were obtained for both clusters during Kepler's K2 mission. However, due to technical limitations and telescope malfunctions, extracting usable data from the K2 mission to identify (especially long) rotation periods requires extensive data preparation. For Ruprecht 147, I have compiled a list of about 300 cluster members from the literature and adopted preprocessed light curves from the Kepler archive where available. They have been cleaned of the gravest of data artifacts but still contained systematics. After correcting them for said artifacts, I was able to identify rotation periods in 31 of them. For M 67 more effort was taken. My work on Ruprecht 147 has shown the limitations imposed by the preselection of Kepler targets. Therefore, I adopted the time series full frame image directly and performed photometry on a much higher spatial resolution to be able to obtain data for as many stars as possible. This also means that I had to deal with the ubiquitous artifacts in Kepler data. For that, I devised a method that correlates the artificial flux variations with the ongoing drift of the telescope pointing in order to remove it. This process was a large success and I was able to create light curves whose quality match and even exceede those that were created by the Kepler mission - all while operating on higher spatial resolution and processing fainter stars. Ultimately, I was able to identify signs of periodic variability in the (created) light curves for 31 and 47 stars in Ruprecht 147 and M 67, respectively. My data connect well to bluer stars of cluster of the same age and extend for the first time to stars redder than early-K and older than 1 Gyr. The cluster data show a clear flattening in the distribution of Ruprecht 147 and even a downturn for M 67, resulting in a somewhat sinusoidal shape. With that, I have shown that the systematic spindown of stars continues at least until 4 Gyr and stars continue to live on a single surface in age-rotation periods-mass space which allows gyrochronology to be used at least up to that age. However, the shape of the spindown - as exemplified by the newly discovered sinusoidal shape of the cluster sequence - deviates strongly from the expectations. I then compiled an extensive sample of rotation data in open clusters - very much including my own work - and used the resulting cluster skeleton (with each cluster forming a rip in color-rotation period-mass space) to investigate if field stars follow the same spindown as cluster stars. For the field stars, I used wide binaries, which - with their shared origin and coevality - are in a sense the smallest possible open clusters. I devised an empirical method to evaluate the consistency between the rotation rates of the wide binary components and found that the vast majority of them are in fact consistent with what is observed in open clusters. This leads me to conclude that gyrochronology - calibrated on open clusters - can be applied to determine the ages of field stars.},
  language  = {en}
}
@phdthesis{Schindler2023,
  author    = {Schindler, Daniel},
  title     = {Mathematical modeling and simulation of protrusion-driven cell dynamics},
  doi       = {10.25932/publishup-61327},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-613275},
  school      = {Universit{\"a}t Potsdam},
  pages     = {VI, 161},
  year      = {2023},
  abstract  = {Amoeboid cell motility takes place in a variety of biomedical processes such as cancer metastasis, embryonic morphogenesis, and wound healing. In contrast to other forms of cell motility, it is mainly driven by substantial cell shape changes. Based on the interplay of explorative membrane protrusions at the front and a slower-acting membrane retraction at the rear, the cell moves in a crawling kind of way. Underlying these protrusions and retractions are multiple physiological processes resulting in changes of the cytoskeleton, a meshwork of different multi-functional proteins. The complexity and versatility of amoeboid cell motility raise the need for novel computational models based on a profound theoretical framework to analyze and simulate the dynamics of the cell shape. The objective of this thesis is the development of (i) a mathematical framework to describe contour dynamics in time and space, (ii) a computational model to infer expansion and retraction characteristics of individual cell tracks and to produce realistic contour dynamics, (iii) and a complementing Open Science approach to make the above methods fully accessible and easy to use. In this work, we mainly used single-cell recordings of the model organism Dictyostelium discoideum. Based on stacks of segmented microscopy images, we apply a Bayesian approach to obtain smooth representations of the cell membrane, so-called cell contours. We introduce a one-parameter family of regularized contour flows to track reference points on the contour (virtual markers) in time and space. This way, we define a coordinate system to visualize local geometric and dynamic quantities of individual contour dynamics in so-called kymograph plots. In particular, we introduce the local marker dispersion as a measure to identify membrane protrusions and retractions in a fully automated way. This mathematical framework is the basis of a novel contour dynamics model, which consists of three biophysiologically motivated components: one stochastic term, accounting for membrane protrusions, and two deterministic terms to control the shape and area of the contour, which account for membrane retractions. Our model provides a fully automated approach to infer protrusion and retraction characteristics from experimental cell tracks while being also capable of simulating realistic and qualitatively different contour dynamics. Furthermore, the model is used to classify two different locomotion types: the amoeboid and a so-called fan-shaped type. With the complementing Open Science approach, we ensure a high standard regarding the usability of our methods and the reproducibility of our research. In this context, we introduce our software publication named AmoePy, an open-source Python package to segment, analyze, and simulate amoeboid cell motility. Furthermore, we describe measures to improve its usability and extensibility, e.g., by detailed run instructions and an automatically generated source code documentation, and to ensure its functionality and stability, e.g., by automatic software tests, data validation, and a hierarchical package structure. The mathematical approaches of this work provide substantial improvements regarding the modeling and analysis of amoeboid cell motility. We deem the above methods, due to their generalized nature, to be of greater value for other scientific applications, e.g., varying organisms and experimental setups or the transition from unicellular to multicellular movement. Furthermore, we enable other researchers from different fields, i.e., mathematics, biophysics, and medicine, to apply our mathematical methods. By following Open Science standards, this work is of greater value for the cell migration community and a potential role model for other Open Science contributions.},
  language  = {en}
}
@phdthesis{Rausch2023,
  author    = {Rausch, Theresa},
  title     = {Role of intestinal bacteria in the conversion of dietary sulfonates},
  doi       = {10.25932/publishup-57403},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-574036},
  school      = {Universit{\"a}t Potsdam},
  pages     = {XXI, 98, LXIV},
  year      = {2023},
  abstract  = {Over the last decades, interest in the impact of the intestinal microbiota on host health has steadily increased. Diet is a major factor that influences the gut microbiota and thereby indirectly affects human health. For example, a high fat diet rich in saturated fatty acids led to an intestinal proliferation of the colitogenic bacterium Bilophila (B.) wadsworthia by stimulating the release of the bile acid taurocholate (TC). TC contains the sulfonated head group taurine, which undergoes conversion to sulfide (H2S) by B. wadsworthia. In a colitis prone murine animal model (IL10 / mice), the bloom of B. wadsworthia was accompanied by an exacerbation of intestinal inflammation. B. wadsworthia is able to convert taurine and also other sulfonates to H2S, indicating the potential association of sulfonate utilization and the stimulation of colitogenic bacteria. This potential link raised the question, whether dietary sulfonates or their sulfonated metabolites stimulate the growth of colitogenic bacteria such as B. wadsworthia and whether these bacteria convert sulfonates to H2S. Besides taurine, which is present in meat, fish and life-style beverages, other dietary sulfonates are part of daily human nutrition. Sulfolipids such as sulfoquinovosyldiacylglycerols (SQDG) are highly abundant in salad, parsley and the cyanobacterium Arthrospira platensis (Spirulina). Based on previous findings, Escherichia (E.) coli releases the polar headgroup sulfoquinovose (SQ) from SQDG. Moreover, E. coli is able to convert SQ to 2,3 dihydroxypropane 1 sulfonate (DHPS) under anoxic conditions. DHPS is also converted to H2S by B. wadsworthia or by other potentially harmful gut bacteria such as members of the genus Desulfovibrio. However, only few studies report the conversion of sulfonates to H2S by bacteria directly isolated from the human intestinal tract. Most sulfonate utilizing bacteria were obtained from environmental sources such as soil or lake sediment or from potentially intestinal sources such as sewage. In the present study, fecal slurries from healthy human subjects were incubated with sulfonates under strictly anoxic conditions, using formate and lactate as electron donors. Fecal slurries that converted sulfonates to H2S, were used as a source for the isolation of H2S forming bacteria. Isolates were identified based on their 16S ribosomal RNA (16S rRNA) gene sequence. In addition, conventional C57BL/6 mice were fed a semisynthetic diet supplemented with the SQDG rich Spirulina (SD) or a Spirulina free control diet (CD). During the intervention, body weight, water and food intake were monitored and fecal samples were collected. After three weeks, mice were killed and organ weight and size were measured, intestinal sulfonate concentrations were quantified, gut microbiota composition was determined and parameters of intestinal and hepatic fat metabolism were analyzed. Human fecal slurries converted taurine, isethionate, cysteate, 3 sulfolacate, SQ and DHPS to H2S. However, inter individual differences in the degradation of these sulfonates were observed. Taurine, isethionate, and 3 sulfolactate were utilized by fecal microbiota of all donors, while SQ, DHPS and cysteate were converted to H2S only by microbiota from certain individuals. Bacterial isolates from human feces able to convert sulfonates to H2S were identified as taurine-utilizing Desulfovibrio strains, taurine- and isethionate-utilizing B. wadsworthia, or as SQ- and 3-sulfolactate- utilizing E. coli. In addition, a co culture of E. coli and B. wadsworthia led to complete degradation of SQ to H2S, with DHPS as an intermediate. Of the human fecal isolates, B. wadsworthia and Desulfovibrio are potentially harmful. E. coli strains might be also pathogenic, but isolated E. coli strains from human feces were identified as commensal gut bacteria. Feeding SD to mice increased the cecal and fecal SQ concentration and altered the microbiota composition, but the relative abundance of SQDG or SQ converting bacteria and colitogenic bacteria was not enriched in mice fed SD for 21 days. SD did not affect the relative abundance of Enterobacteriaceae, to which the SQDG- and SQ-utilizing E. coli strain belong to. Furthermore, the abundance of B. wadsworthia decreased from day 2 to day 9 in feces, but recovered afterwards in the same mice. In cecum, the family Desulfovibrionaceae, to which B. wadsworthia and Desulfovibrio belong to, were reduced. No changes in the number of B. wadsworthia in cecal contents or of Desulfovibrionaceae in feces were observed. SD led to a mild activation of the immune system, which was not observed in control mice fed CD. Mice fed SD had an increased body weight, a higher adipose tissue weight, and a decreased liver weight compared to the control mice, suggesting an impact of Spirulina supplementation on fat metabolism. However, expression levels of genes involved in intestinal and hepatic intracellular lipid uptake and availability were reduced. Further investigations on the lipid metabolism at protein level could help to clarify these discrepancies. In summary, humans differ in the ability of their fecal microbiota to utilize dietary sulfonates. While sulfonates stimulated the proliferation of potentially colitogenic isolates from human fecal slurries, the increased availability of SQ in Spirulina fed conventional mice did not lead to an enrichment of such bacteria. Presence or absence of these bacteria may explain the inter individual differences in sulfonate conversion observed for fecal slurries. This work provides new insights in the ability of intestinal bacteria to utilize sulfonates and thus, contributes to a better understanding of microbiota-mediated effects on dietary sulfonate utilization. Interestingly, feeding of the Spirulina-supplemented diet led to body-weight gain in mice in the first two days of intervention, the reasons for which are unknown.},
  language  = {en}
}
@phdthesis{Metz2023,
  author    = {Metz, Malte},
  title     = {Finite fault earthquake source inversions},
  doi       = {10.25932/publishup-61974},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-619745},
  school      = {Universit{\"a}t Potsdam},
  pages     = {143},
  year      = {2023},
  abstract  = {Earthquake modeling is the key to a profound understanding of a rupture. Its kinematics or dynamics are derived from advanced rupture models that allow, for example, to reconstruct the direction and velocity of the rupture front or the evolving slip distribution behind the rupture front. Such models are often parameterized by a lattice of interacting sub-faults with many degrees of freedom, where, for example, the time history of the slip and rake on each sub-fault are inverted. To avoid overfitting or other numerical instabilities during a finite-fault estimation, most models are stabilized by geometric rather than physical constraints such as smoothing. As a basis for the inversion approach of this study, we build on a new pseudo-dynamic rupture model (PDR) with only a few free parameters and a simple geometry as a physics-based solution of an earthquake rupture. The PDR derives the instantaneous slip from a given stress drop on the fault plane, with boundary conditions on the developing crack surface guaranteed at all times via a boundary element approach. As a side product, the source time function on each point on the rupture plane is not constraint and develops by itself without additional parametrization. The code was made publicly available as part of the Pyrocko and Grond Python packages. The approach was compared with conventional modeling for different earthquakes. For example, for the Mw 7.1 2016 Kumamoto, Japan, earthquake, the effects of geometric changes in the rupture surface on the slip and slip rate distributions could be reproduced by simply projecting stress vectors. For the Mw 7.5 2018 Palu, Indonesia, strike-slip earthquake, we also modelled rupture propagation using the 2D Eikonal equation and assuming a linear relationship between rupture and shear wave velocity. This allowed us to give a deeper and faster propagating rupture front and the resulting upward refraction as a new possible explanation for the apparent supershear observed at the Earth's surface. The thesis investigates three aspects of earthquake inversion using PDR: (1) to test whether implementing a simplified rupture model with few parameters into a probabilistic Bayesian scheme without constraining geometric parameters is feasible, and whether this leads to fast and robust results that can be used for subsequent fast information systems (e.g., ground motion predictions). (2) To investigate whether combining broadband and strong-motion seismic records together with near-field ground deformation data improves the reliability of estimated rupture models in a Bayesian inversion. (3) To investigate whether a complex rupture can be represented by the inversion of multiple PDR sources and for what type of earthquakes this is recommended. I developed the PDR inversion approach and applied the joint data inversions to two seismic sequences in different tectonic settings. Using multiple frequency bands and a multiple source inversion approach, I captured the multi-modal behaviour of the Mw 8.2 2021 South Sandwich subduction earthquake with a large, curved and slow rupturing shallow earthquake bounded by two faster and deeper smaller events. I could cross-validate the results with other methods, i.e., P-wave energy back-projection, a clustering analysis of aftershocks and a simple tsunami forward model. The joint analysis of ground deformation and seismic data within a multiple source inversion also shed light on an earthquake triplet, which occurred in July 2022 in SE Iran. From the inversion and aftershock relocalization, I found indications for a vertical separation between the shallower mainshocks within the sedimentary cover and deeper aftershocks at the sediment-basement interface. The vertical offset could be caused by the ductile response of the evident salt layer to stress perturbations from the mainshocks. The applications highlight the versatility of the simple PDR in probabilistic seismic source inversion capturing features of rather different, complex earthquakes. Limitations, as the evident focus on the major slip patches of the rupture are discussed as well as differences to other finite fault modeling methods.},
  language  = {en}
}
@phdthesis{Yildiz2023,
  author    = {Yildiz, Tugba},
  title     = {Dissecting the role of the TusA protein for cell functionality and FtsZ ring assembly in Escherichia coli},
  doi       = {10.25932/publishup-61713},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-617135},
  school      = {Universit{\"a}t Potsdam},
  pages     = {XI, 171},
  year      = {2023},
  abstract  = {In this work, the role of the TusA protein was investigated for the cell functionality and FtsZ ring assembly in Escherichia coli. TusA is the tRNA-2-thiouridine synthase that acts as a sulfur transferase in tRNA thiolation for the formation of 2-thiouridine at the position 34 (wobble base) of tRNALys, tRNAGlu and tRNAGln. It binds the persulfide form of sulfur and transfers it to further proteins during mnm5s2U tRNA modification at wobble position and for Moco biosynthesis. With this thiomodification of tRNA, the ribosome binding is more efficient and frameshifting is averted during the protein translation. Previous studies have revealed an essential role of TusA in bacterial cell physiology since deletion of the tusA gene resulted in retarded growth and filamentous cells during the exponential growth phase in a rich medium which suddenly disappeared during the stationary phase. This indicates a problem in the cell division process. Therefore the focus of this work was to investigate the role of TusA for cell functionality and FtsZ ring formation and thus the cell separation. The reason behind the filamentous growth of the tusA mutant strain was investigated by growth and morphological analyses. ΔtusA cells showed a retarded growth during the exponential phase compared to the WT strain. Also, morphological analysis of ΔtusA cells confirmed the filamentous cell shape. The growth and cell division defects in ΔtusA indicated a defect in FtsZ protein as a key player of cell division. The microscopic investigation revealed that filamentous ΔtusA cells possessed multiple DNA parts arranged next to each other. This suggested that although the DNA replication occurred correctly, there was a defect in the step where FtsZ should act; probably FtsZ is unable to assemble to the ring structure or the assembled ring is not able to constrict. All tested mutant strains (ΔtusD, ΔtusE and ΔmnmA) involved in the mnm5s2U34 tRNA modification pathway shared the similar retarded growth and filamentous cell shape like ΔtusA strain. Thus, the cell division defect arises from a defect in mnm5s2U34 tRNA thiolation. Since the FtsZ ring formation was supposed to be defective in filaments, a possible intracellular interaction of TusA and FtsZ was examined by fluorescent (EGFP and mCherry) fusion proteins expression and FRET. FtsZ expressing tusA mutant (DE3) cells showed a red mCherry signal at the cell poles, indicating that FtsZ is still in the assembling phase. Interestingly, the cellular region of EGFP-TusA fusion protein expressed in ΔtusA (DE3) was conspicuous; the EGFP signal was spread throughout the whole cell and, in addition, a slight accumulation of the EGFP-TusA fluorescence was detectable at the cell poles, the same part of the cell as for mCherry-FtsZ. Thus, this strongly suggested an interaction of TusA and FtsZ. Furthermore, the cellular FtsZ and Fis concentrations, and their change during different growth phases were determined via immunoblotting. All tested deletion strains of mnm5s2U34 tRNA modification show high cellular FtsZ and Fis levels in the exponential phase, shifting to the later growth phases. This shift reflects the retarded growth, whereby the deletion strains reach later the exponential phase. Conclusively, the growth and cell division defect, and thus the formation of filaments, is most likely caused by changes in the cellular FtsZ and Fis concentrations. Finally, the translation efficiencies of certain proteins (RpoS, Fur, Fis and mFis) in tusA mutant and in additional gene deletion strains were studied whether they were affected by using unmodified U34 tRNAs of Lys, Glu and Gln. The translation efficiency is decreased in mnm5s2U34 tRNA modification-impaired strains in addition to their existing growth and cell division defect due to the elimination of these three amino acids. Finally, these results confirm and reinforce the importance of Lys, Glu and Gln and the mnm5s2U34 tRNA thiolation for efficient protein translation. Thus, these findings verify that the translation of fur, fis and rpoS is regulated by mnm5s2U34 tRNA modifications, which is growth phase-dependent. In total, this work showed the importance of the role of TusA for bacterial cell functionality and physiology. The deletion of the tusA gene disrupted a complex regulatory network within the cell, that most influenced by the decreased translation of Fis and RpoS, caused by the absence of mnm5s2U34 tRNA modifications. The disruption of RpoS and Fis cellular network influences in turn the cellular FtsZ level in the early exponential phase. Finally, the reduced FtsZ concentration leads to elongated, filamentous E. coli cells, which are unable to divide.},
  language  = {en}
}
@phdthesis{Soltani2023,
  author    = {Soltani, Ouad},
  title     = {BLF1-Mode of Action in Barley Leaf Size Control},
  doi       = {10.25932/publishup-60705},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-607054},
  school      = {Universit{\"a}t Potsdam},
  pages     = {110},
  year      = {2023},
  abstract  = {Establishment of final leaf size in plants represents a complex mechanism that relies on the precise regulation of two interconnected cellular processes, cell division and cell expansion. In previous work, the barley protein BROAD LEAF1 (BLF1) was identified as a novel negative regulator of cell proliferation, that mainly limits leaf growth in the width direction. Here I identified a novel RING/U-box protein that interacts with BLF1 through a yeast two hybrid screen. Using BiFC, Co-IP and FRET I confirmed the interaction of the two proteins in planta. Enrichment of the BLF1-mEGFP fusion protein and the increase of the FRET signal upon MG132 treatment of tobacco plants, together with an in vivo ubiquitylation assay in bacteria, confirmed that the RING/U-box E3 interacts with BLF1 to mediate its ubiquitylation and degradation by the 26S proteasome system. Consistent with regulation of endogenous BLF1 in barley by proteasomal degradation, inhibition of the proteasome by bortezomib treatment on BLF1-vYFP transgenic barley plants also resulted in an enrichment of the BLF1 protein. I thus demonstrated that RING/U-box E3 is colocalized with BLF1 in nuclei and negatively regulates BLF1 protein levels. Analysis of ring-e3_1 knock-out mutants suggested the involvement of the RING/U-box E3 gene in leaf growth control, although the effect was mainly on leaf length. Together, my results suggest that proteasomal degradation, possibly mediated by RING/U-box E3, contributes to fine-tuning BLF1 protein-level in barley.},
  language  = {en}
}
@phdthesis{Djalali2023,
  author    = {Djalali, Saveh Arman},
  title     = {Multiresponsive complex emulsions: Concepts for the design of active and adaptive liquid colloidal systems},
  doi       = {10.25932/publishup-57520},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-575203},
  school      = {Universit{\"a}t Potsdam},
  pages     = {151},
  year      = {2023},
  abstract  = {Complex emulsions are dispersions of kinetically stabilized multiphasic emulsion droplets comprised of two or more immiscible liquids that provide a novel material platform for the generation of active and dynamic soft materials. In recent years, the intrinsic reconfigurable morphological behavior of complex emulsions, which can be attributed to the unique force equilibrium between the interfacial tensions acting at the various interfaces, has become of fundamental and applied interest. As such, particularly biphasic Janus droplets have been investigated as structural templates for the generation of anisotropic precision objects, dynamic optical elements or as transducers and signal amplifiers in chemo- and bio-sensing applications. In the present thesis, switchable internal morphological responses of complex droplets triggered by stimuli-induced alterations of the balance of interfacial tensions have been explored as a universal building block for the design of multiresponsive, active, and adaptive liquid colloidal systems. A series of underlying principles and mechanisms that influence the equilibrium of interfacial tensions have been uncovered, which allowed the targeted design of emulsion bodies that can alter their shape, bind and roll on surfaces, or change their geometrical shape in response to chemical stimuli. Consequently, combinations of the unique triggerable behavior of Janus droplets with designer surfactants, such as a stimuli-responsive photosurfactant (AzoTAB) resulted for instance in shape-changing soft colloids that exhibited a jellyfish inspired buoyant motion behavior, holding great promise for the design of biological inspired active material architectures and transformable soft robotics. In situ observations of spherical Janus emulsion droplets using a customized side-view microscopic imaging setup with accompanying pendant dropt measurements disclosed the sensitivity regime of the unique chemical-morphological coupling inside complex emulsions and enabled the recording of calibration curves for the extraction of critical parameters of surfactant effectiveness. The deduced new "responsive drop" method permitted a convenient and cost-efficient quantification and comparison of the critical micelle concentrations (CMCs) and effectiveness of various cationic, anionic, and nonionic surfactants. Moreover, the method allowed insightful characterization of stimuli-responsive surfactants and monitoring of the impact of inorganic salts on the CMC and surfactant effectiveness of ionic and nonionic surfactants. Droplet functionalization with synthetic crown ether surfactants yielded a synthetically minimal material platform capable of autonomous and reversible adaptation to its chemical environment through different supramolecular host-guest recognition events. Addition of metal or ammonium salts resulted in the uptake of the resulting hydrophobic complexes to the hydrocarbon hemisphere, whereas addition of hydrophilic ammonium compounds such as amino acids or polypeptides resulted in supramolecular assemblies at the hydrocarbon-water interface of the droplets. The multiresponsive material platform enabled interfacial complexation and thus triggered responses of the droplets to a variety of chemical triggers including metal ions, ammonium compounds, amino acids, antibodies, carbohydrates as well as amino-functionalized solid surfaces. In the final chapter, the first documented optical logic gates and combinatorial logic circuits based on complex emulsions are presented. More specifically, the unique reconfigurable and multiresponsive properties of complex emulsions were exploited to realize droplet-based logic gates of varying complexity using different stimuli-responsive surfactants in combination with diverse readout methods. In summary, different designs for multiresponsive, active, and adaptive liquid colloidal systems were presented and investigated, enabling the design of novel transformative chemo-intelligent soft material platforms.},
  language  = {en}
}
@phdthesis{Kim2023,
  author    = {Kim, Jiyong},
  title     = {Synthesis of InP quantum dots and their applications},
  doi       = {10.25932/publishup-58535},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-585351},
  school      = {Universit{\"a}t Potsdam},
  pages     = {XIX, 142},
  year      = {2023},
  abstract  = {Technologically important, environmentally friendly InP quantum dots (QDs) typically used as green and red emitters in display devices can achieve exceptional photoluminescence quantum yields (PL QYs) of near-unity (95-100\%) when the-state-of-the-art core/shell heterostructure of the ZnSe inner/ZnS outer shell is elaborately applied. Nevertheless, it has only led to a few industrial applications as QD liquid crystal display (QD-LCD) which is applied to blue backlight units, even though QDs has a lot of possibilities that able to realize industrially feasible applications, such as QD light-emitting diodes (QD‒LEDs) and luminescence solar concentrator (LSC), due to their functionalizable characteristics. Before introducing the main research, the theoretical basis and fundamentals of QDs are described in detail on the basis of the quantum mechanics and experimental synthetic results, where a concept of QD and colloidal QD, a type-I core/shell structure, a transition metal doped semiconductor QDs, the surface chemistry of QD, and their applications (LSC, QD‒LEDs, and EHD jet printing) are sequentially elucidated for better understanding. This doctoral thesis mainly focused on the connectivity between QD materials and QD devices, based on the synthesis of InP QDs that are composed of inorganic core (core/shell heterostructure) and organic shell (surface ligands on the QD surface). In particular, as for the former one (core/shell heterostructure), the ZnCuInS mid-shell as an intermediate layer is newly introduced between a Cu-doped InP core and a ZnS shell for LSC devices. As for the latter one (surface ligands), the ligand effect by 1-octanethiol and chloride ion are investigated for the device stability in QD‒LEDs and the printability of electro-hydrodynamic (EHD) jet printing system, in which this research explores the behavior of surface ligands, based on proton transfer mechanism on the QD surface. Chapter 3 demonstrates the synthesis of strain-engineered highly emissive Cu:InP/Zn-Cu-In-S (ZCIS)/ZnS core/shell/shell heterostructure QDs via a one-pot approach. When this unconventional combination of a ZCIS/ZnS double shelling scheme is introduced to a series of Cu:InP cores with different sizes, the resulting Cu:InP/ZCIS/ZnS QDs with a tunable near-IR PL range of 694-850 nm yield the highest-ever PL QYs of 71.5-82.4\%. These outcomes strongly point to the efficacy of the ZCIS interlayer, which makes the core/shell interfacial strain effectively alleviated, toward high emissivity. The presence of such an intermediate ZCIS layer is further examined by comparative size, structural, and compositional analyses. The end of this chapter briefly introduces the research related to the LSC devices, fabricated from Cu:InP/ZCIS/ZnS QDs, currently in progress. Chapter 4 mainly deals with ligand effect in 1-octanethiol passivation of InP/ZnSe/ZnS QDs in terms of incomplete surface passivation during synthesis. This chapter demonstrates the lack of anionic carboxylate ligands on the surface of InP/ZnSe/ZnS quantum dots (QDs), where zinc carboxylate ligands can be converted to carboxylic acid or carboxylate ligands via proton transfer by 1-octanethiol. The as-synthesized QDs initially have an under-coordinated vacancy surface, which is passivated by solvent ligands such as ethanol and acetone. Upon exposure of 1-octanethiol to the QD surface, 1-octanthiol effectively induces the surface binding of anionic carboxylate ligands (derived from zinc carboxylate ligands) by proton transfer, which consequently exchanges ethanol and acetone ligands that bound on the incomplete QD surface. The systematic chemical analyses, such as thermogravimetric analysis‒mass spectrometry and proton nuclear magnetic resonance spectroscopy, directly show the interplay of surface ligands, and it associates with QD light-emitting diodes (QD‒LEDs). Chapter 5 shows the relation between material stability of QDs and device stability of QD‒LEDs through the investigation of surface chemistry and shell thickness. In typical III-V colloidal InP quantum dots (QDs), an inorganic ZnS outermost shell is used to provide stability when overcoated onto the InP core. However, this work presents a faster photo-degradation of InP/ZnSe/ZnS QDs with a thicker ZnS shell than that with a thin ZnS shell when 1-octanethiol was applied as a sulfur source to form ZnS outmost shell. Herein, 1-octanethiol induces the form of weakly-bound carboxylate ligand via proton transfer on the QD surface, resulting in a faster degradation at UV light even though a thicker ZnS shell was formed onto InP/ZnSe QDs. Detailed insight into surface chemistry was obtained from proton nuclear magnetic resonance spectroscopy and thermogravimetric analysis-mass spectrometry. However, the lifetimes of the electroluminescence devices fabricated from InP/ZnSe/ZnS QDs with a thick or a thin ZnS shell show surprisingly the opposite result to the material stability of QDs, where the QD light-emitting diodes (QD‒LEDs) with a thick ZnS shelled QDs maintained its luminance more stable than that with a thin ZnS shelled QDs. This study elucidates the degradation mechanism of the QDs and the QD light-emitting diodes based on the results and discuss why the material stability of QDs is different from the lifetime of QD‒LEDs. Chapter 6 suggests a method how to improve a printability of EHD jet printing when QD materials are applied to QD ink formulation, where this work introduces the application of GaP mid-shelled InP QDs as a role of surface charge in EHD jet printing technique. In general, GaP intermediate shell has been introduced in III-V colloidal InP quantum dots (QDs) to enhance their thermal stability and quantum efficiency in the case of type-I core/shell/shell heterostructure InP/GaP/ZnSeS QDs. Herein, these highly luminescent InP/GaP/ZnSeS QDs were synthesized and applied to EHD jet printing, by which this study demonstrates that unreacted Ga and Cl ions on the QD surface induce the operating voltage of cone jet and cone jet formation to be reduced and stabilized, respectively. This result indicates GaP intermediate shell not only improves PL QY and thermal stability of InP QDs but also adjusts the critical flow rate required for cone-jet formation. In other words, surface charges of quantum dots can have a significant role in forming cone apex in the EHD capillary nozzle. For an industrially convenient validation of surface charges on the QD surface, Zeta potential analyses of QD solutions as a simple method were performed, as well as inductively coupled plasma optical emission spectrometry (ICP-OES) for a composition of elements. Beyond the generation of highly emissive InP QDs with narrow FWHM, these studies talk about the connection between QD material and QD devices not only to make it a vital jumping-off point for industrially feasible applications but also to reveal from chemical and physical standpoints the origin that obstructs the improvement of device performance experimentally and theoretically.},
  language  = {en}
}
@phdthesis{Lepre2023,
  author    = {Lepre, Enrico},
  title     = {Nitrogen-doped carbonaceous materials for energy and catalysis},
  doi       = {10.25932/publishup-57739},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-577390},
  school      = {Universit{\"a}t Potsdam},
  pages     = {153},
  year      = {2023},
  abstract  = {Facing the environmental crisis, new technologies are needed to sustain our society. In this context, this thesis aims to describe the properties and applications of carbon-based sustainable materials. In particular, it reports the synthesis and characterization of a wide set of porous carbonaceous materials with high nitrogen content obtained from nucleobases. These materials are used as cathodes for Li-ion capacitors, and a major focus is put on the cathode preparation, highlighting the oxidation resistance of nucleobase-derived materials. Furthermore, their catalytic properties for acid/base and redox reactions are described, pointing to the role of nitrogen speciation on their surfaces. Finally, these materials are used as supports for highly dispersed nickel loading, activating the materials for carbon dioxide electroreduction.},
  language  = {en}
}
@phdthesis{Xie2023,
  author    = {Xie, Dongjiu},
  title     = {Nanostructured Iron-based compounds as sulfur host material for lithium-sulfur batteries},
  doi       = {10.25932/publishup-61036},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-610369},
  school      = {Universit{\"a}t Potsdam},
  pages     = {viii, 142},
  year      = {2023},
  abstract  = {The present thesis focuses on the synthesis of nanostructured iron-based compounds by using β-FeOOH nanospindles and poly(ionic liquid)s (PILs) vesicles as hard and soft templates, respectively, to suppress the shuttle effect of lithium polysulfides (LiPSs) in Li-S batteries. Three types of composites with different nanostructures (mesoporous nanospindle, yolk-shell nanospindle, and nanocapsule) have been synthesized and applied as sulfur host material for Li-S batteries. Their interactions with LiPSs and effects on the electrochemical performance of Li-S batteries have been systematically studied. In the first part of the thesis, carbon-coated mesoporous Fe3O4 (C@M-Fe3O4) nanospindles have been synthesized to suppress the shuttle effect of LiPSs. First, β-FeOOH nanospindles have been synthesized via the hydrolysis of iron (III) chloride in aqueous solution and after silica coating and subsequent calcination, mesoporous Fe2O3 (M-Fe2O3) have been obtained inside the confined silica layer through pyrolysis of β-FeOOH. After the removal of the silica layer, electron tomography (ET) has been applied to rebuild the 3D structure of the M-Fe2O3 nanospindles. After coating a thin layer of polydopamine (PDA) as carbon source, the PDA-coated M-Fe2O3 particles have been calcinated to synthesize C@M-Fe3O4 nanospindles. With the chemisorption of Fe3O4 and confinement of mesoporous structure to anchor LiPSs, the composite C@M-Fe3O4/S electrode delivers a remaining capacity of 507.7 mAh g-1 at 1 C after 600 cycles. In the second part of the thesis, a series of iron-based compounds (Fe3O4, FeS2, and FeS) with the same yolk-shell nanospindle morphology have been synthesized, which allows for the direct comparison of the effects of compositions on the electrochemical performance of Li-S batteries. The Fe3O4-carbon yolk-shell nanospindles have been synthesized by using the β-FeOOH nanospindles as hard template. Afterwards, Fe3O4-carbon yolk-shell nanospindles have been used as precursors to obtain iron sulfides (FeS and FeS2)-carbon yolk-shell nanospindles through sulfidation at different temperatures. Using the three types of yolk-shell nanospindles as sulfur host, the effects of compositions on interactions with LiPSs and electrochemical performance in Li-S batteries have been systematically investigated and compared. Benefiting from the chemisorption and catalytic effect of FeS2 particles and the physical confinement of the carbon shell, the FeS2-C/S electrode exhibits the best electrochemical performance with an initial specific discharge capacity of 877.6 mAh g-1 at 0.5 C and a retention ratio of 86.7\% after 350 cycles. In the third part, PILs vesicles have been used as soft template to synthesize carbon nanocapsules embedded with iron nitride particles to immobilize and catalyze LiPSs in Li-S batteries. First, 3-n-decyl-1-vinylimidazolium bromide has been used as monomer to synthesize PILs nanovesicles by free radical polymerization. Assisted by PDA coating route and ion exchange, PIL nanovesicles have been successfully applied as soft template in morphology-maintaining carbonization to prepare carbon nanocapsules embedded with iron nitride nanoparticles (FexN@C). The well-dispersed iron nitride nanoparticles effectively catalyze the conversion of LiPSs to Li2S, owing to their high electrical conductivity and strong chemical binding to LiPSs. The constructed FexN@C/S cathode demonstrates a high initial discharge capacity of 1085.0 mAh g-1 at 0.5 C with a remaining value of 930.0 mAh g-1 after 200 cycles. The results in the present thesis demonstrate the facile synthetic routes of nanostructured iron-based compounds with controllable morphologies and compositions using soft and hard colloidal templates, which can be applied as sulfur host to suppress the shuttle behavior of LiPSs. The synthesis approaches developed in this thesis are also applicable to fabricating other transition metal-based compounds with porous nanostructures for other applications.},
  language  = {en}
}
@phdthesis{Hildebrandt2023,
  author    = {Hildebrandt, Jana},
  title     = {Studies on nanoplastics for the preparation of reference materials},
  doi       = {10.25932/publishup-61710},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-617102},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xvi, 88},
  year      = {2023},
  abstract  = {The present work focuses on the preparation and characterisation of various nanoplastic reference material candidates. Nanoplastics are plastic particles in a size range of 1 - 1000 nm. The term has emerged in recent years as a distinction from the larger microplastic (1 - 1000 μm). Since the properties of the two plastic particles differ significantly due to their size, it is important to have nanoplastic reference material. This was produced for the polymer types polypropylene (PP) and polyethylene (PE) as well as poly(lactic acid) (PLA). A top-down method was used to produce the nanoplastic for the polyolefins PP and PE (Section 3.1). The material was crushed in acetone using an Ultra-Turrax disperser and then transferred to water. This process produces reproducible results when repeated, making it suitable for the production of a reference material candidate. The resulting dispersions were investigated using dynamic and electrophoretic light scattering. The dispersion of PP particles gave a mean hydrodynamic diameter Dh = 180.5±5.8 nm with a PDI = 0.08±0.02 and a zeta potential ζ = -43.0 ± 2.0 mV. For the PE particles, a diameter Dh = 344.5 ± 34.6 nm, with a PDI = 0.39 ± 0.04 and a zeta potential of ζ = -40.0 ± 4.2 mV was measured. This means that both dispersions are nanoplastics, as the particles are < 1000 nm. Furthermore, the starting material of these polyolefin particles was mixed with a gold salt and thereby the nanoplastic production was repeated in order to obtain nanoplastic particles doped with gold, which should simplify the detection of the particles. In addition to the top-down approach, a bottom-up method was chosen for the PLA (Section 3.2). Here, the polymer was first dissolved in THF and stabilised with a surfactant. Then water was added and THF evaporated, leaving an aqueous PLA dispersion. This experiment was also investigated using dynamic light scattering and, when repeated, yielded reproducible results, i. e. an average hydrodynamic diameter of Dh = 89.2 ± 3.0 nm. Since the mass concentration of PLA in the dispersion is known due to the production method, a Python notebook was tested for these samples to calculate the number and mass concentration of nano(plastic) particles using the MALS results. Similar to the plastic produced in Section 3.1, gold was also incorporated into the particle, which was achieved by adding a dispersion of gold clusters with a diameter of D = 1.15 nm in an ionic liquid (IL) in the production process. Here, the preparation of the gold clusters in the ionic liquid 1-ethyl-3-methylimidazolium dicyanamide ([Emim][DCA]) represented the first use of an IL both as a reducing agent for gold and as a solvent for the gold clusters. Two volumes of gold cluster dispersion were added during the PLA particle synthesis. The addition of the gold clusters leads to much larger particles. The nanoPLA with 0.8\% Au has a diameter of Dh = 198.0 ± 10.8 nm and the nanoPLA with 4.9\% Au has a diameter of Dh = 259.1 ± 23.7 nm. First investigations by TEM imaging show that the nanoPLA particles form hollow spheres when gold clusters are added. However, the mechanism leading to these structures remains unclear.},
  language  = {en}
}
@phdthesis{Stiegler2023,
  author    = {Stiegler, Jonas},
  title     = {Mobile link functions in unpredictable agricultural landscapes},
  doi       = {10.25932/publishup-62202},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-622023},
  school      = {Universit{\"a}t Potsdam},
  pages     = {155},
  year      = {2023},
  abstract  = {Animal movement is a crucial aspect of life, influencing ecological and evolutionary processes. It plays an important role in shaping biodiversity patterns, connecting habitats and ecosystems. Anthropogenic landscape changes, such as in agricultural environments, can impede the movement of animals by affecting their ability to locate resources during recurring movements within home ranges and, on a larger scale, disrupt migration or dispersal. Inevitably, these changes in movement behavior have far-reaching consequences on the mobile link functions provided by species inhabiting such extensively altered matrix areas. In this thesis, I investigate the movement characteristics and activity patterns of the European hare (Lepus europaeus), aiming to understand their significance as a pivotal species in fragmented agricultural landscapes. I reveal intriguing results that shed light on the importance of hares for seed dispersal, the influence of personality traits on behavior and space use, the sensitivity of hares to extreme weather conditions, and the impacts of GPS collaring on mammals' activity patterns and movement behavior. In Chapter I, I conducted a controlled feeding experiment to investigate the potential impact of hares on seed dispersal. By additionally utilizing GPS data of hares in two contrasting landscapes, I demonstrated that hares play a vital role, acting as effective mobile linkers for many plant species in small and isolated habitat patches. The analysis of seed intake and germination success revealed that distinct seed traits, such as density, surface area, and shape, profoundly affect hares' ability to disperse seeds through endozoochory. These findings highlight the interplay between hares and plant communities and thus provide valuable insights into seed dispersal mechanisms in fragmented landscapes. By employing standardized behavioral tests in Chapter II, I revealed consistent behavioral responses among captive hares while simultaneously examining the intricate connection between personality traits and spatial patterns within wild hare populations. This analysis provides insights into the ecological interactions and dynamics within hare populations in agricultural habitats. Examining the concept of animal personality, I established a link between personality traits and hare behavior. I showed that boldness, measured through standardized tests, influences individual exploration styles, with shy and bold hares exhibiting distinct space use patterns. In addition to providing valuable insights into the role of animal personality in heterogeneous environments, my research introduced a novel approach demonstrating the feasibility of remotely assessing personality types using animal-borne sensors without additional disturbance of the focal individual. While climate conditions severely impact the activity and, consequently, the fitness of wildlife species across the globe, in Chapter III, I uncovered the sensitivity of hares to temperature, humidity, and wind speed during their peak reproduction period. I found a strong response in activity to high temperatures above 25°C, with a particularly pronounced effect during temperature extremes of over 35°C. The non-linear relationship between temperature and activity was characterized by contrasting responses observed for day and night. These findings emphasize the vulnerability of hares to climate change and the potential consequences for their fitness and population dynamics with the ongoing rise of temperature. Since such insights can only be obtained through capturing and tagging free-ranging animals, I assessed potential impacts and the recovery process post-collar attachment in Chapter IV. For this purpose, I examined the daily distances moved and the temporal-associated activity of 1451 terrestrial mammals out of 42 species during their initial tracking period. The disturbance intensity and the speed of recovery varied across species, with herbivores, females, and individuals captured and collared in relatively secluded study areas experiencing more pronounced disturbances due to limited anthropogenic influences. Mobile linkers are essential for maintaining biodiversity as they influence the dynamics and resilience of ecosystems. Furthermore, their ability to move through fragmented landscapes makes them a key component for restoring disturbed sites. Individual movement decisions determine the scale of mobile links, and understanding variations in space use among individuals is crucial for interpreting their functions. Climate change poses further challenges, with wildlife species expected to adjust their behavior, especially in response to high-temperature extremes, and comprehending the anthropogenic influence on animal movements will remain paramount to effective land use planning and the development of successful conservation strategies. This thesis provides a comprehensive ecological understanding of hares in agricultural landscapes. My research findings underscore the importance of hares as mobile linkers, the influence of personality traits on behavior and spatial patterns, the vulnerability of hares to extreme weather conditions, and the immediate consequences of collar attachment on mammalian movements. Thus, I contribute valuable insights to wildlife conservation and management efforts, aiding in developing strategies to mitigate the impact of environmental changes on hare populations. Moreover, these findings enable the development of methodologies aimed at minimizing the impacts of collaring while also identifying potential biases in the data, thereby benefiting both animal welfare and the scientific integrity of localization studies.},
  language  = {en}
}
@phdthesis{Iqbal2023,
  author    = {Iqbal, Zafar},
  title     = {Interface design and characterization for stable inorganic perovskite solar cells},
  doi       = {10.25932/publishup-61831},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-618315},
  school      = {Universit{\"a}t Potsdam},
  pages     = {ix, 133},
  year      = {2023},
  abstract  = {We live in an era driven by fossil fuels. The prevailing climate change suggests that we have to significantly reduce greenhouse gas emissions. The only way forward is to use renewable energy sources. Among those, solar energy is a clean, affordable, and sustainable source of energy. It has the potential to satisfy the world's energy demand in the future. However, there is a need to develop new materials that can make solar energy usable. Photovoltaics (PV) are devices that convert photon energy into electrical energy. The most commonly used solar cells are based on crystalline silicon. However, the fabrication process for silicon solar cells is technologically difficult and costly. Solar cells based on lead halide perovskites (PSCs) have emerged as a new candidate for PV applications since 2009. To date, PSCs have achieved 26\% power-conversion-efficiency (PCE) for its single junction, and 33.7\% PCE for tandem junction devices. However, there is still room for improvement in overall performance. The main challenge for the commercialization of this technology is the stability of the solar cells under operational conditions. Inorganic perovskite CsPbI3 has attracted researchers' interest due to its stability at elevated temperatures, however, inorganic perovskites also have associated challenges, e.g. phase stability, larger voltage loss compared to their organic-inorganic hybrid counterparts, and interface energy misalignment. The most efficient inorganic perovskite solar cell is stable for up to a few hundred hours while the most stable device in the field of inorganic PSCs reported so far is at 17\% PCE. This suggests the need for improvement of the interfaces for enhanced open circuit voltage (VOC), and optimization of the energy alignment at the interfaces. This dissertation presents the study on interfaces between the perovskite layer and hole transport layer (HTL) for stable CsPbI3 solar cells. The first part of the thesis presents an investigation of the CsPbI3 film annealing environment and its subsequent effects on the perovskite/HTL interface dynamics. Thin films annealed in dry air were compared with thin films annealed in ambient air. Synchrotron-based hard X-ray spectroscopy (HAXPES) measurements reveal that annealing in ambient air does not have an adverse effect; instead, those samples undergo surface band bending. This surface band modification induces changes in interface charge dynamics and, consequently, an improvement in charge extraction at the interfaces. Further, transient surface photovoltage (tr-SPV) simulations show that air-annealed samples exhibit fewer trap states compared to samples annealed in dry air. Finally, by annealing the CsPbI3 films in ambient air, a PCE of 19.8\% and Voc of 1.23 V were achieved for an n-i-p structured device. Interface engineering has emerged as a strategy to extract the charge and optimize the energy alignment in perovskite solar cells (PSCs). An interface with fewer trap states and energy band levels closer to the selective contact helps to attain improved efficiencies in PSCs. The second part of the thesis presents a design for the CsPbI3/HTM interface. In this work, an interface between CsPbI3 perovskite and its hole selective contact N2,N2,N2′,N2′,N7,N7,N7′,N7′-octakis(4-methoxyphenyl)-9,9′-spirobi[9H-fluorene]-2,2′,7,7′-tetramine(Spiro-OMeTAD), realized by trioctylphosphine oxide (TOPO), a dipole molecule is introduced. On top of a perovskite film well-passivated by n-octyl ammonium Iodide (OAI), it created an upward surface band-bending at the interface byTOPO that optimizes energy level alignment and enhances the extraction of holes from the perovskite layer to the hole transport material. Consequently, a Voc of 1.2 V and high-power conversion efficiency (PCE) of over 19\% were achieved for inorganic CsPbI3 perovskite solar cells. In addition, the work also sheds light on the interfacial charge-selectivity and the long-term stability of CsPbI3 perovskite solar cells. The third part of the thesis extends the previous studies to polymeric poly(3-hexylthiophene-2,5-diyl) (P3HT) as HTL. The CsPbI3/P3HT interface is critical due to high non-radiative recombination. This work presents a CsPbI3/P3HT interface modified with a long-chain alkyl halide molecule, n-hexyl trimethyl ammonium bromide (HTAB). This molecule largely passivates the CsPbI3 perovskite surface and improves the charge extraction across the interface. Consequently, a Voc of over 1.00 V and 14.2\% PCE were achieved for CsPbI3 with P3HT as HTM. Overall the results presented in this dissertation introduce and discuss methods to design and study the interfaces in CsPbI3-based solar cells. This study can pave the way for novel interface designs between CsPbI3 and HTM for charge extraction, efficiency and stability.},
  language  = {en}
}
@article{Draude2023,
  author    = {Draude, Claude},
  title     = {Working with Diversity in Informatics},
  series = {Hochschuldidaktik Informatik HDI 2021 (Commentarii informaticae didacticae)},
  journal   = {Hochschuldidaktik Informatik HDI 2021 (Commentarii informaticae didacticae)},
  number    = {13},
  publisher = {Universit{\"a}tsverlag Potsdam},
  address   = {Potsdam},
  isbn      = {978-3-86956-548-4},
  issn      = {1868-0844},
  doi       = {10.25932/publishup-61378},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-613787},
  pages     = {13 -- 33},
  year      = {2023},
  abstract  = {Diversity is a term that is broadly used and challenging for informatics research, development and education. Diversity concerns may relate to unequal participation, knowledge and methodology, curricula, institutional planning etc. For a lot of these areas, measures, guidelines and best practices on diversity awareness exist. A systemic, sustainable impact of diversity measures on informatics is still largely missing. In this paper I explore what working with diversity and gender concepts in informatics entails, what the main challenges are and provide thoughts for improvement. The paper includes definitions of diversity and intersectionality, reflections on the disciplinary basis of informatics and practical implications of integrating diversity in informatics research and development. In the final part, two concepts from the social sciences and the humanities, the notion of "third space"/hybridity and the notion of "feminist ethics of care", serve as a lens to foster more sustainable ways of working with diversity in informatics.},
  language  = {en}
}
@article{GrosseBoeltingScheppachMuehling2023,
  author    = {Große-B{\"o}lting, Gregor and Scheppach, Lukas and M{\"u}hling, Andreas},
  title     = {The Place of Ethics in Computer Science Education},
  series = {Hochschuldidaktik Informatik HDI 2021 (Commentarii informaticae didacticae)},
  journal   = {Hochschuldidaktik Informatik HDI 2021 (Commentarii informaticae didacticae)},
  number    = {13},
  publisher = {Universit{\"a}tsverlag Potsdam},
  address   = {Potsdam},
  isbn      = {978-3-86956-548-4},
  issn      = {1868-0844},
  doi       = {10.25932/publishup-61598},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-615982},
  pages     = {173 -- 187},
  year      = {2023},
  abstract  = {Ethical issues surrounding modern computing technologies play an increasingly important role in the public debate. Yet, ethics still either doesn't appear at all or only to a very small extent in computer science degree programs. This paper provides an argument for the value of ethics beyond a pure responsibility perspective and describes the positive value of ethical debate for future computer scientists. It also provides a systematic analysis of the module handbooks of 67 German universities and shows that there is indeed a lack of ethics in computer science education. Finally, we present a principled design of a compulsory course for undergraduate students.},
  language  = {en}
}
@article{Petersen2023,
  author    = {Petersen, Jens},
  title     = {Information Law and Economic Theory},
  series = {Studien zur juristischen Ideengeschichte},
  journal   = {Studien zur juristischen Ideengeschichte},
  publisher = {Universit{\"a}tsverlag Potsdam},
  address   = {Potsdam},
  isbn      = {978-3-86956-543-9},
  doi       = {10.25932/publishup-60433},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-604330},
  pages     = {195 -- 202},
  year      = {2023},
  language  = {en}
}
@techreport{GraeberHilbertKoenig2023,
  type      = {Working Paper},
  author    = {Graeber, Daniel and Hilbert, Viola and K{\"o}nig, Johannes},
  title     = {Inequality of Opportunity in Wealth},
  series = {CEPA Discussion Papers},
  journal   = {CEPA Discussion Papers},
  number    = {69},
  issn      = {2628-653X},
  doi       = {10.25932/publishup-60967},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-609673},
  pages     = {54},
  year      = {2023},
  abstract  = {While inequality of opportunity (IOp) in earnings is well studied, the literature on IOp in individual net wealth is scarce to non-existent. This is problematic because both theoretical and empirical evidence show that the position in the wealth and income distribution can significantly diverge.We measure ex-ante IOp in net wealth for Germany using data from the Socio-Economic Panel (SOEP). Ex-ante IOp is defined as the contribution of circumstances to the inequality in net wealth before effort is exerted. The SOEP allows for a direct mapping from individual circumstances to individual net wealth and for a detailed decomposition of net wealth inequality into a variety of circumstances; among them childhood background, intergenerational transfers, and regional characteristics. The ratio of inequality of opportunity to total inequality is stable from 2002 to 2019. This is in sharp contrast to labor earnings, where ex-ante IOp is declining over time. Our estimates suggest that about 62\% of the inequality in net wealth is due to circumstances. The most important circumstances are intergenerational transfers, parental occupation, and the region of birth. In contrast, gender and individuals' own education are the most important circumstances for earnings.},
  language  = {en}
}
@techreport{AmorosoHerrmannKritikos2023,
  type      = {Working Paper},
  author    = {Amoroso, Sara and Herrmann, Benedikt and Kritikos, Alexander},
  title     = {The Role of Regulation and Regional Government Quality for High Growth Firms},
  series = {CEPA Discussion Papers},
  journal   = {CEPA Discussion Papers},
  number    = {71},
  issn      = {2628-653X},
  doi       = {10.25932/publishup-61277},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-612771},
  pages     = {32},
  year      = {2023},
  abstract  = {High growth firms (HGFs) are important for job creation and considered to be precursors of economic growth. We investigate how formal institutions, like product- and labor-market regulations, as well as the quality of regional governments that implement these regulations, affect HGF development across European regions. Using data from Eurostat, OECD, WEF, and Gothenburg University, we show that both regulatory stringency and the quality of the regional government influence the regional shares of HGFs. More importantly, we find that the effect of labor- and product-market regulations ultimately depends on the quality of regional governments: in regions with high quality of government, the share of HGFs is neither affected by the level of product market regulation, nor by more or less flexibility in hiring and firing practices. Our findings contribute to the debate on the effects of regulations by showing that regulations are not, per se, "good, bad, and ugly", rather their impact depends on the efficiency of regional governments. Our paper offers important building blocks to develop tailored policy measures that may influence the development of HGFs in a region.},
  language  = {en}
}
@article{Kainz2023,
  author    = {Kainz, Fritz},
  title     = {Extraterritorial Constitutional Rights},
  series = {MenschenRechtsMagazin},
  volume    = {28},
  journal   = {MenschenRechtsMagazin},
  number    = {2},
  publisher = {Universit{\"a}tsverlag Potsdam},
  address   = {Potsdam},
  issn      = {2941-1149},
  doi       = {10.25932/publishup-60996},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-609962},
  pages     = {140 -- 150},
  year      = {2023},
  abstract  = {Im Laufe der vergangenen Jahrzehnte widmeten Lehre und Rechtsprechung der extraterritorialen Anwendbarkeit von Menschenrechtsabkommen erhebliche Aufmerksamkeit. Im Gegensatz fand die extraterritoriale Anwendung verfassungsgesetzlich verankerter Grundrechte nur in den Vereinigten Staaten vergleichbares akademisches Interesse. Insbesondere l{\"a}sst sich ein Mangel an vergleichender Forschung in diesem Bereich feststellen, was zur herrschenden Meinung beitr{\"a}gt, dass internationale Menschenrechtskonventionen den geeigneten Rahmen bieten, unter dem inl{\"a}ndische Gerichte extraterritoriale Fragen des Verfassungsrechts pr{\"u}fen sollten. Dieser Artikel argumentiert, dass inl{\"a}ndische verfassungsrechtliche Regelungen und die zu ihrer Durchsetzung zust{\"a}ndigen Gerichte ein wichtiges Gegengewicht in der festgefahrenen internationalen Extraterritorialit{\"a}tsdebatte spielen sollten. Anhand zweier Fallstudien aus Deutschland und den Vereinigten Staaten wird gezeigt, dass inl{\"a}ndische Verfassungsgerichte manchmal besser geeignet sind als Vertragsorgane, um die Grundwerte der Menschenw{\"u}rde und der Universalit{\"a}t im extraterritorialen Kontext zu wahren. Dies zeigt sich besonders deutlich am Beispiel Deutschlands, das {\"u}ber eine lange Tradition der Integration in internationale Mehrebenensysteme und des grundrechtliche "Bottom-up"-Widerstands innerhalb solcher Systeme verf{\"u}gt. Aktuelle F{\"a}lle des Bundesverfassungsgerichts zur extraterritorialen Anwendung des Grundgesetzes auf ausl{\"a}ndische nachrichtendienstliche Aktivit{\"a}ten und Klimawandel unterst{\"u}tzen diese Theorie. Allerdings kann ein unabh{\"a}ngiger verfassungsrechtlicher Ansatz auch in solchen nationalen Systemen eigenst{\"a}ndige normative Effekte erzielen, welche st{\"a}rker vom internationalen Menschenrechtssystem isoliert sind. So verwendete auch der amerikanische Oberste Gerichtshof (Supreme Court) die inl{\"a}ndische verfassungsrechtliche Doktrin, um die streng territoriale Auslegung des Internationalen Pakts {\"u}ber b{\"u}rgerliche und politische Rechte durch die amerikanische Regierung zu umgehen und einen funktionalen Ansatz f{\"u}r die extraterritoriale Anwendbarkeit von Grundrechten im Fall der Inhaftierung mutmaßlicher Terroristen im Marinest{\"u}tzpunkt von Guant{\´a}namo Bay zu nutzen. Die Untersuchung dieser Beispiele beansprucht nicht, umfassend oder repr{\"a}sentativ die vielf{\"a}ltigen Verfassungen der Welt und ihre Beziehungen zu v{\"o}lkerrechtlichen Menschenrechtsnormen zu untersuchen. Dennoch sollte die unabh{\"a}ngige Wirkung von verfassungsrechtlichen Rahmenbedingungen in diesen beiden disparaten F{\"a}llen umso mehr Anreiz f{\"u}r eine verst{\"a}rkte vergleichende Forschung zu verfassungsrechtlichen Extraterritorialit{\"a}tsregimen und ihrem Beitrag zum Projekt der Menschenrechte bieten.},
  language  = {en}
}