@phdthesis{Hutter2014,
  author    = {Hutter, Anne},
  title     = {Unveiling the epoch of reionization by simulations and high-redshift galaxies},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-76998},
  school      = {Universit{\"a}t Potsdam},
  pages     = {vi, 155},
  year      = {2014},
  abstract  = {The Epoch of Reionization marks after recombination the second major change in the ionization state of the universe, going from a neutral to an ionized state. It starts with the appearance of the first stars and galaxies; a fraction of high-energy photons emitted from galaxies permeate into the intergalactic medium (IGM) and gradually ionize the hydrogen, until the IGM is completely ionized at z~6 (Fan et al., 2006). While the progress of reionization is driven by galaxy evolution, it changes the ionization and thermal state of the IGM substantially and affects subsequent structure and galaxy formation by various feedback mechanisms. Understanding this interaction between reionization and galaxy formation is further impeded by a lack of understanding of the high-redshift galactic properties such as the dust distribution and the escape fraction of ionizing photons. Lyman Alpha Emitters (LAEs) represent a sample of high-redshift galaxies that are sensitive to all these galactic properties and the effects of reionization. In this thesis we aim to understand the progress of reionization by performing cosmological simulations, which allows us to investigate the limits of constraining reionization by high-redshift galaxies as LAEs, and examine how galactic properties and the ionization state of the IGM affect the visibility and observed quantities of LAEs and Lyman Break galaxies (LBGs). In the first part of this thesis we focus on performing radiative transfer calculations to simulate reionization. We have developed a mapping-sphere-scheme, which, starting from spherically averaged temperature and density fields, uses our 1D radiative transfer code and computes the effect of each source on the IGM temperature and ionization (HII, HeII, HeIII) profiles, which are subsequently mapped onto a grid. Furthermore we have updated the 3D Monte-Carlo radiative transfer pCRASH, enabling detailed reionization simulations which take individual source characteristics into account. In the second part of this thesis we perform a reionization simulation by post-processing a smoothed-particle hydrodynamical (SPH) simulation (GADGET-2) with 3D radiative transfer (pCRASH), where the ionizing sources are modelled according to the characteristics of the stellar populations in the hydrodynamical simulation. Following the ionization fractions of hydrogen (HI) and helium (HeII, HeIII), and temperature in our simulation, we find that reionization starts at z~11 and ends at z~6, and high density regions near sources are ionized earlier than low density regions far from sources. In the third part of this thesis we couple the cosmological SPH simulation and the radiative transfer simulations with a physically motivated, self-consistent model for LAEs, in order to understand the importance of the ionization state of the IGM, the escape fraction of ionizing photons from galaxies and dust in the interstellar medium (ISM) on the visibility of LAEs. Comparison of our models results with the LAE Lyman Alpha (Lya) and UV luminosity functions at z~6.6 reveals a three-dimensional degeneracy between the ionization state of the IGM, the ionizing photons escape fraction and the ISM dust distribution, which implies that LAEs act not only as tracers of reionization but also of the ionizing photon escape fraction and of the ISM dust distribution. This degeneracy does not even break down when we compare simulated with observed clustering of LAEs at z~6.6. However, our results show that reionization has the largest impact on the amplitude of the LAE angular correlation functions, and its imprints are clearly distinguishable from those of properties on galactic scales. These results show that reionization cannot be constrained tightly by exclusively using LAE observations. Further observational constraints, e.g. tomographies of the redshifted hydrogen 21cm line, are required. In addition we also use our LAE model to probe the question when a galaxy is visible as a LAE or a LBG. Within our model galaxies above a critical stellar mass can produce enough luminosity to be visible as a LBG and/or a LAE. By finding an increasing duty cycle of LBGs with Lya emission as the UV magnitude or stellar mass of the galaxy rises, our model reveals that the brightest (and most massive) LBGs most often show Lya emission. Predicting the Lya equivalent width (Lya EW) distribution and the fraction of LBGs showing Lya emission at z~6.6, we reproduce the observational trend of the Lya EWs with UV magnitude. However, the Lya EWs of the UV brightest LBGs exceed observations and can only be reconciled by accounting for an increased Lya attenuation of massive galaxies, which implies that the observed Lya brightest LAEs do not necessarily coincide with the UV brightest galaxies. We have analysed the dependencies of LAE observables on the properties of the galactic and intergalactic medium and the LAE-LBG connection, and this enhances our understanding of the nature of LAEs.},
  language  = {en}
}
@phdthesis{Merkel2014,
  author    = {Merkel, Roswitha},
  title     = {Untersuchung zur Synthese und Eigenschaften von komplexen Oligospiroketalen},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-72561},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {Es ist in dieser Arbeit gelungen, starre Oligospiroketal(OSK)-St{\"a}be als Grundbausteine f{\"u}r komplexe 2D- und 3D-Systeme zu verwenden. Dazu wurde ein difunktionalisierter starrer Stab synthetisiert, der mit seines Gleichen und anderen verzweigten Funktionalisierungseinheiten in Azid-Alkin-Klickreaktionen eingesetzt wurde. An zwei {\"u}ber Klickreaktion verkn{\"u}pften OSK-St{\"a}ben konnten mittels theoretischer Berechnungen Aussagen {\"u}ber die neuartige Bimodalit{\"a}t der Konformation getroffen werden. Es wurde daf{\"u}r der Begriff Gelenkstab eingef{\"u}hrt, da die Molek{\"u}le um ein Gelenk gedreht sowohl gestreckt als auch geknickt vorliegen k{\"o}nnen. Aufbauend auf diesen Erkenntnissen konnte gezeigt werden, dass nicht nur gezielt große Polymere aus bis zu vier OSK-St{\"a}ben synthetisiert werden k{\"o}nnen, sondern es auch m{\"o}glich ist, durch gezielte {\"A}nderung von Reaktionsbedingungen der Klickreaktion auch Cyclen aus starren OSK-St{\"a}ben herzustellen. Die neu entwickelte Substanzklasse der Gelenkst{\"a}be wurde im Hinblick auf die Steuerung des vorliegenden Gleichgewichts zwischen geknicktem und gestrecktem Gelenkstab hin untersucht. Daf{\"u}r wurde der Gelenkstab mit Pyrenylresten in terminaler Position versehen. Es wurde durch Fluoreszenzmessungen festgestellt, dass das Gleichgewicht z. B. durch die Temperatur oder die Wahl des L{\"o}sungsmittels beeinflussbar ist. F{\"u}r vielfache Anwendungen wurde eine vereinfachte Synthesestrategie gefunden, mit der eine beliebige Funktionalisierung in nur einem Syntheseschritt erreicht werden konnte. Es konnten photoaktive Gelenkst{\"a}be synthetisiert werden, die gezielt zur intramolekularen Dimerisierung gef{\"u}hrt werden konnten. Zus{\"a}tzlich wurde durch Aminos{\"a}uren ein Verkn{\"u}pfungselement am Ende der Gelenkst{\"a}be gefunden, das eine stereoselektive Synthese von Mehrfachfunktionalisierungen zul{\"a}sst. Die Synthese der komplexen Gelenkst{\"a}be wurde als ein neuartiges Gebiet aufgezeigt und bietet ein breites Forschungspotential f{\"u}r weitere Anwendungen z. B. in der Biologie (als molekulare Schalter f{\"u}r Ionentransporte) und in der Materialchemie (als Ladungs- oder Energietransporteure).},
  language  = {de}
}
@phdthesis{Orgis2014,
  author    = {Orgis, Thomas},
  title     = {Unstetige Galerkin-Diskretisierung niedriger Ordnung in einem atmosph{\"a}rischen Multiskalenmodell},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-70687},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {Die Dynamik der Atmosph{\"a}re der Erde umfasst einen Bereich von mikrophysikalischer Turbulenz {\"u}ber konvektive Prozesse und Wolkenbildung bis zu planetaren Wellenmustern. F{\"u}r Wettervorhersage und zur Betrachtung des Klimas {\"u}ber Jahrzehnte und Jahrhunderte ist diese Gegenstand der Modellierung mit numerischen Verfahren. Mit voranschreitender Entwicklung der Rechentechnik sind Neuentwicklungen der dynamischen Kerne von Klimamodellen, die mit der feiner werdenden Aufl{\"o}sung auch entsprechende Prozesse aufl{\"o}sen k{\"o}nnen, notwendig. Der dynamische Kern eines Modells besteht in der Umsetzung (Diskretisierung) der grundlegenden dynamischen Gleichungen f{\"u}r die Entwicklung von Masse, Energie und Impuls, so dass sie mit Computern numerisch gel{\"o}st werden k{\"o}nnen. Die vorliegende Arbeit untersucht die Eignung eines unstetigen Galerkin-Verfahrens niedriger Ordnung f{\"u}r atmosph{\"a}rische Anwendungen. Diese Eignung f{\"u}r Gleichungen mit Wirkungen von externen Kr{\"a}ften wie Erdanziehungskraft und Corioliskraft ist aus der Theorie nicht selbstverst{\"a}ndlich. Es werden n{\"o}tige Anpassungen beschrieben, die das Verfahren stabilisieren, ohne sogenannte „slope limiter" einzusetzen. F{\"u}r das unmodifizierte Verfahren wird belegt, dass es nicht geeignet ist, atmosph{\"a}rische Gleichgewichte stabil darzustellen. Das entwickelte stabilisierte Modell reproduziert eine Reihe von Standard-Testf{\"a}llen der atmosph{\"a}rischen Dynamik mit Euler- und Flachwassergleichungen in einem weiten Bereich von r{\"a}umlichen und zeitlichen Skalen. Die L{\"o}sung der thermischen Windgleichung entlang der mit den Isobaren identischen charakteristischen Kurven liefert atmosph{\"a}rische Gleichgewichtszust{\"a}nde mit durch vorgegebenem Grundstrom einstellbarer Neigung zu(barotropen und baroklinen)Instabilit{\"a}ten, die f{\"u}r die Entwicklung von Zyklonen wesentlich sind. Im Gegensatz zu fr{\"u}heren Arbeiten sind diese Zust{\"a}nde direkt im z-System(H{\"o}he in Metern)definiert und m{\"u}ssen nicht aus Druckkoordinaten {\"u}bertragen werden.Mit diesen Zust{\"a}nden, sowohl als Referenzzustand, von dem lediglich die Abweichungen numerisch betrachtet werden, und insbesondere auch als Startzustand, der einer kleinen St{\"o}rung unterliegt, werden verschiedene Studien der Simulation von barotroper und barokliner Instabilit{\"a}t durchgef{\"u}hrt. Hervorzuheben ist dabei die durch die Formulierung von Grundstr{\"o}men mit einstellbarer Baroklinit{\"a}t erm{\"o}glichte simulationsgest{\"u}tzte Studie des Grades der baroklinen Instabilit{\"a}t verschiedener Wellenl{\"a}ngen in Abh{\"a}ngigkeit von statischer Stabilit{\"a}t und vertikalem Windgradient als Entsprechung zu Stabilit{\"a}tskarten aus theoretischen Betrachtungen in der Literatur.},
  language  = {de}
}
@phdthesis{Beck2014,
  author    = {Beck, Andreas},
  title     = {Unionsrechtliche Staatshaftung der EU-Mitgliedstaaten f{\"u}r judikatives Unrecht},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-80211},
  school      = {Universit{\"a}t Potsdam},
  pages     = {XIX, 260},
  year      = {2014},
  abstract  = {Obwohl in den unionalen Vertr{\"a}gen bis heute keine Vorschrift bez{\"u}glich einer Staatshaftung der Mitgliedstaaten f{\"u}r Entscheidungen ihrer Gerichte existiert, hat der Gerichtshof der Europ{\"a}ischen Union (EuGH) in einer Reihe von Entscheidungen eine solche Haftung entwickelt und pr{\"a}zisiert. Die vorliegende Arbeit analysiert eingehend diese Rechtsprechung mitsamt den sich daraus ergebenden facettenreichen Rechtsfragen. Im ersten Kapitel widmet sich die Arbeit der historischen Entwicklung der unionsrechtlichen Staatshaftung im Allgemeinen, ausgehend von dem bekannten Francovich-Urteil aus dem Jahr 1991. Sodann werden im zweiten Kapitel die zur Haftung f{\"u}r judikatives Unrecht grundlegenden Entscheidungen in den Rechtssachen K{\"o}bler und Traghetti vorgestellt. In dem sich anschließenden dritten Kapitel wird der Rechtscharakter der unionsrechtlichen Staatshaftung - einschließlich der Frage einer Subsidiarit{\"a}t des unionsrechtlichen Anspruchs gegen{\"u}ber bestehenden nationalen Staatshaftungsanspr{\"u}chen - untersucht. Das vierte Kapitel widmet sich der Frage, ob eine unionsrechtliche Staatshaftung f{\"u}r judikatives Unrecht prinzipiell anzuerkennen ist, wobei die wesentlichen f{\"u}r und gegen eine solche Haftung sprechenden Argumente ausf{\"u}hrlich behandelt und bewertet werden. Im f{\"u}nften Kapitel werden die im Zusammenhang mit den unionsrechtlichen Haftungsvoraussetzungen stehenden Probleme der Haftung f{\"u}r letztinstanzliche Gerichtsentscheidungen detailliert er{\"o}rtert. Zugleich wird der Frage nachgegangen, ob eine Haftung f{\"u}r fehlerhafte unterinstanzliche Gerichtsentscheidungen zu bef{\"u}rworten ist. Das sechste Kapitel befasst sich mit der Ausgestaltung der unionsrechtlichen Staatshaftung f{\"u}r letztinstanzliche Gerichtsentscheidungen durch die Mitgliedstaaten, wobei u.a. zur Anwendbarkeit der deutschen Haftungsprivilegien bei judikativem Unrecht auf den unionsrechtlichen Staatshaftungsanspruch Stellung genommen wird. Im letzten Kapitel wird der Frage nachgegangen, ob der EuGH {\"u}berhaupt {\"u}ber eine Kompetenz zur Schaffung der Staatshaftung f{\"u}r letztinstanzliche Gerichtsentscheidungen verf{\"u}gte. Abschließend werden die wichtigsten Ergebnisse der Arbeit pr{\"a}sentiert und ein Ausblick auf weitere m{\"o}gliche Auswirkungen und Entwicklungen der unionsrechtlichen Staatshaftung f{\"u}r judikatives Unrecht gegeben.},
  language  = {de}
}
@phdthesis{Logačev2014,
  author    = {Logačev, Pavel},
  title     = {Underspecification and parallel processing in sentence comprehension},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-82047},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {The aim of the present thesis is to answer the question to what degree the processes involved in sentence comprehension are sensitive to task demands. A central phenomenon in this regard is the so-called ambiguity advantage, which is the finding that ambiguous sentences can be easier to process than unambiguous sentences. This finding may appear counterintuitive, because more meanings should be associated with a higher computational effort. Currently, two theories exist that can explain this finding. The Unrestricted Race Model (URM) by van Gompel et al. (2001) assumes that several sentence interpretations are computed in parallel, whenever possible, and that the first interpretation to be computed is assigned to the sentence. Because the duration of each structure-building process varies from trial to trial, the parallelism in structure-building predicts that ambiguous sentences should be processed faster. This is because when two structures are permissible, the chances that some interpretation will be computed quickly are higher than when only one specific structure is permissible. Importantly, the URM is not sensitive to task demands such as the type of comprehension questions being asked. A radically different proposal is the strategic underspecification model by Swets et al. (2008). It assumes that readers do not attempt to resolve ambiguities unless it is absolutely necessary. In other words, they underspecify. According the strategic underspecification hypothesis, all attested replications of the ambiguity advantage are due to the fact that in those experiments, readers were not required to fully understand the sentence. In this thesis, these two models of the parser's actions at choice-points in the sentence are presented and evaluated. First, it is argued that the Swets et al.'s (2008) evidence against the URM and in favor of underspecification is inconclusive. Next, the precise predictions of the URM as well as the underspecification model are refined. Subsequently, a self-paced reading experiment involving the attachment of pre-nominal relative clauses in Turkish is presented, which provides evidence against strategical underspecification. A further experiment is presented which investigated relative clause attachment in German using the speed-accuracy tradeoff (SAT) paradigm. The experiment provides evidence against strategic underspecification and in favor of the URM. Furthermore the results of the experiment are used to argue that human sentence comprehension is fallible, and that theories of parsing should be able to account for that fact. Finally, a third experiment is presented, which provides evidence for the sensitivity to task demands in the treatment of ambiguities. Because this finding is incompatible with the URM, and because the strategic underspecification model has been ruled out, a new model of ambiguity resolution is proposed: the stochastic multiple-channel model of ambiguity resolution (SMCM). It is further shown that the quantitative predictions of the SMCM are in agreement with experimental data. In conclusion, it is argued that the human sentence comprehension system is parallel and fallible, and that it is sensitive to task-demands.},
  language  = {en}
}
@phdthesis{Goswami2014,
  author    = {Goswami, Bedartha},
  title     = {Uncertainties in climate data analysis},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-78312},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {Scientific inquiry requires that we formulate not only what we know, but also what we do not know and by how much. In climate data analysis, this involves an accurate specification of measured quantities and a consequent analysis that consciously propagates the measurement errors at each step. The dissertation presents a thorough analytical method to quantify errors of measurement inherent in paleoclimate data. An additional focus are the uncertainties in assessing the coupling between different factors that influence the global mean temperature (GMT). Paleoclimate studies critically rely on `proxy variables' that record climatic signals in natural archives. However, such proxy records inherently involve uncertainties in determining the age of the signal. We present a generic Bayesian approach to analytically determine the proxy record along with its associated uncertainty, resulting in a time-ordered sequence of correlated probability distributions rather than a precise time series. We further develop a recurrence based method to detect dynamical events from the proxy probability distributions. The methods are validated with synthetic examples and demonstrated with real-world proxy records. The proxy estimation step reveals the interrelations between proxy variability and uncertainty. The recurrence analysis of the East Asian Summer Monsoon during the last 9000 years confirms the well-known `dry' events at 8200 and 4400 BP, plus an additional significantly dry event at 6900 BP. We also analyze the network of dependencies surrounding GMT. We find an intricate, directed network with multiple links between the different factors at multiple time delays. We further uncover a significant feedback from the GMT to the El Ni{\~n}o Southern Oscillation at quasi-biennial timescales. The analysis highlights the need of a more nuanced formulation of influences between different climatic factors, as well as the limitations in trying to estimate such dependencies.},
  language  = {en}
}
@phdthesis{Trabant2014,
  author    = {Trabant, Christoph},
  title     = {Ultrafast photoinduced phase transitions in complex materials probed by time-resolved resonant soft x-ray diffraction},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-71377},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {In processing and data storage mainly ferromagnetic (FM) materials are being used. Approaching physical limits, new concepts have to be found for faster, smaller switches, for higher data densities and more energy efficiency. Some of the discussed new concepts involve the material classes of correlated oxides and materials with antiferromagnetic coupling. Their applicability depends critically on their switching behavior, i.e., how fast and how energy efficient material properties can be manipulated. This thesis presents investigations of ultrafast non-equilibrium phase transitions on such new materials. In transition metal oxides (TMOs) the coupling of different degrees of freedom and resulting low energy excitation spectrum often result in spectacular changes of macroscopic properties (colossal magneto resistance, superconductivity, metal-to-insulator transitions) often accompanied by nanoscale order of spins, charges, orbital occupation and by lattice distortions, which make these material attractive. Magnetite served as a prototype for functional TMOs showing a metal-to-insulator-transition (MIT) at T = 123 K. By probing the charge and orbital order as well as the structure after an optical excitation we found that the electronic order and the structural distortion, characteristics of the insulating phase in thermal equilibrium, are destroyed within the experimental resolution of 300 fs. The MIT itself occurs on a 1.5 ps timescale. It shows that MITs in functional materials are several thousand times faster than switching processes in semiconductors. Recently ferrimagnetic and antiferromagnetic (AFM) materials have become interesting. It was shown in ferrimagnetic GdFeCo, that the transfer of angular momentum between two opposed FM subsystems with different time constants leads to a switching of the magnetization after laser pulse excitation. In addition it was theoretically predicted that demagnetization dynamics in AFM should occur faster than in FM materials as no net angular momentum has to be transferred out of the spin system. We investigated two different AFM materials in order to learn more about their ultrafast dynamics. In Ho, a metallic AFM below T ≈ 130 K, we found that the AFM Ho can not only be faster but also ten times more energy efficiently destroyed as order in FM comparable metals. In EuTe, an AFM semiconductor below T ≈ 10 K, we compared the loss of magnetization and laser-induced structural distortion in one and the same experiment. Our experiment shows that they are effectively disentangled. An exception is an ultrafast release of lattice dynamics, which we assign to the release of magnetostriction. The results presented here were obtained with time-resolved resonant soft x-ray diffraction at the Femtoslicing source of the Helmholtz-Zentrum Berlin and at the free-electron laser in Stanford (LCLS). In addition the development and setup of a new UHV-diffractometer for these experiments will be reported.},
  language  = {en}
}
@phdthesis{Schollaen2014,
  author    = {Schollaen, Karina},
  title     = {Tracking climate signals in tropical trees},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-71947},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {The tropical warm pool waters surrounding Indonesia are one of the equatorial heat and moisture sources that are considered as a driving force of the global climate system. The climate in Indonesia is dominated by the equatorial monsoon system, and has been linked to El Ni{\~n}o-Southern Oscillation (ENSO) events, which often result in severe droughts or floods over Indonesia with profound societal and economic impacts on the populations living in the world's fourth most populated country. The latest IPCC report states that ENSO will remain the dominant mode in the tropical Pacific with global effects in the 21st century and ENSO-related precipitation extremes will intensify. However, no common agreement exists among climate simulation models for projected change in ENSO and the Australian-Indonesian Monsoon. Exploring high-resolution palaeoclimate archives, like tree rings or varved lake sediments, provide insights into the natural climate variability of the past, and thus helps improving and validating simulations of future climate changes. Centennial tree-ring stable isotope records | Within this doctoral thesis the main goal was to explore the potential of tropical tree rings to record climate signals and to use them as palaeoclimate proxies. In detail, stable carbon (δ13C) and oxygen (δ18O) isotopes were extracted from teak trees in order to establish the first well-replicated centennial (AD 1900-2007) stable isotope records for Java, Indonesia. Furthermore, different climatic variables were tested whether they show significant correlation with tree-ring proxies (ring-width, δ13C, δ18O). Moreover, highly resolved intra-annual oxygen isotope data were established to assess the transfer of the seasonal precipitation signal into the tree rings. Finally, the established oxygen isotope record was used to reveal possible correlations with ENSO events. Methodological achievements | A second goal of this thesis was to assess the applicability of novel techniques which facilitate and optimize high-resolution and high-throughput stable isotope analysis of tree rings. Two different UV-laser-based microscopic dissection systems were evaluated as a novel sampling tool for high-resolution stable isotope analysis. Furthermore, an improved procedure of tree-ring dissection from thin cellulose laths for stable isotope analysis was designed. The most important findings of this thesis are: I) The herein presented novel sampling techniques improve stable isotope analyses for tree-ring studies in terms of precision, efficiency and quality. The UV-laser-based microdissection serve as a valuable tool for sampling plant tissue at ultrahigh-resolution and for unprecedented precision. II) A guideline for a modified method of cellulose extraction from wholewood cross-sections and subsequent tree-ring dissection was established. The novel technique optimizes the stable isotope analysis process in two ways: faster and high-throughput cellulose extraction and precise tree-ring separation at annual to high-resolution scale. III) The centennial tree-ring stable isotope records reveal significant correlation with regional precipitation. High-resolution stable oxygen values, furthermore, allow distinguishing between dry and rainy season rainfall. IV) The δ18O record reveals significant correlation with different ENSO flavors and demonstrates the importance of considering ENSO flavors when interpreting palaeoclimatic data in the tropics. The findings of my dissertation show that seasonally resolved δ18O records from Indonesian teak trees are a valuable proxy for multi-centennial reconstructions of regional precipitation variability (monsoon signals) and large-scale ocean-atmosphere phenomena (ENSO) for the Indo-Pacific region. Furthermore, the novel methodological achievements offer many unexplored avenues for multidisciplinary research in high-resolution palaeoclimatology.},
  language  = {en}
}
@phdthesis{Biegholdt2014,
  author    = {Biegholdt, Georg},
  title     = {Theorie und Praxis der Lerngruppensprache im Musikunterricht},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-69657},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {Der Umgang mit der musikalischen Fachsprache wird in den meisten Lehrpl{\"a}nen f{\"u}r den Musikunterricht der Sekundarstufe I gefordert. Allerdings fehlt nicht nur in den Lehrpl{\"a}nen, sondern auch in der musikdidaktischen Literatur eine inhaltliche Ausgestaltung dieser Forderung. {\"U}ber Inhalt, Umfang und Ziel der in der Schule anzuwendenden musikalischen Fachsprache herrscht daher keine Klarheit. Empirische Untersuchungen zu den sprachlichen Inhalten im Musikunterricht liegen ebenfalls nicht vor. Auch in vielen anderen Unterrichtsf{\"a}chern ist die Forschungslage die sprachlichen Inhalte betreffend {\"u}berschaubar. Mit der Verwendung von Sprache sind jedoch nicht nur Kommunikationsprozesse verbunden, sondern gleichzeitig Lernprozesse innerhalb der Sprache, von der Wortschatzerweiterung bis zur Herstellung von inhaltlich-thematischen Zusammenh{\"a}ngen. Diese Lernprozesse werden beeinflusst von der Wortwahl der Lernenden und Lehrenden. Die Wortwahl der Lernenden l{\"a}sst gleichzeitig einen Schluss zu auf den Stand des Wissens und dessen Vernetzung. Auf dieser Basis ist der sprachliche Inhalt des Musikunterrichtes der Gegenstand der vorgelegten Arbeit. Ziel der Studie war herauszu¬finden, inwieweit es gelingen kann, durch die Art und Weise des Einsatzes und den Umfang von Fachsprache im Musikunterricht Lernprozesse effektiver und erfolgreicher zu gestalten und besser an Gegenwarts- und Zukunftsbed{\"u}rfnissen der Lernenden auszurichten.},
  language  = {de}
}
@phdthesis{BacskaiAtkari2014,
  author    = {Bacskai-Atkari, Julia},
  title     = {The syntax of comparative constructions : operators, ellipsis phenomena and functional left peripheries},
  publisher = {Universit{\"a}tsverlag Potsdam},
  address   = {Potsdam},
  isbn      = {978-3-86956-301-5},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-71255},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xiii, 310},
  year      = {2014},
  abstract  = {Adopting a minimalist framework, the dissertation provides an analysis for the syntactic structure of comparatives, with special attention paid to the derivation of the subclause. The proposed account explains how the comparative subclause is connected to the matrix clause, how the subclause is formed in the syntax and what additional processes contribute to its final structure. In addition, it casts light upon these problems in cross-linguistic terms and provides a model that allows for synchronic and diachronic differences. This also enables one to give a more adequate explanation for the phenomena found in English comparatives since the properties of English structures can then be linked to general settings of the language and hence need no longer be considered as idiosyncratic features of the grammar of English. First, the dissertation provides a unified analysis of degree expressions, relating the structure of comparatives to that of other degrees. It is shown that gradable adjectives are located within a degree phrase (DegP), which in turn projects a quantifier phrase (QP) and that these two functional layers are always present, irrespectively of whether there is a phonologically visible element in these layers. Second, the dissertation presents a novel analysis of Comparative Deletion by reducing it to an overtness constraint holding on operators: in this way, it is reduced to morphological differences and cross-linguistic variation is not conditioned by way of postulating an arbitrary parameter. Cross-linguistic differences are ultimately dependent on whether a language has overt operators equipped with the relevant - [+compr] and [+rel] - features. Third, the dissertation provides an adequate explanation for the phenomenon of Attributive Comparative Deletion, as attested in English, by way of relating it to the regular mechanism of Comparative Deletion. I assume that Attributive Comparative Deletion is not a universal phenomenon, and its presence in English can be conditioned by independent, more general rules, while the absence of such restrictions leads to its absence in other languages. Fourth, the dissertation accounts for certain phenomena related to diachronic changes, examining how the changes in the status of comparative operators led to changes in whether Comparative Deletion is attested in a given language: I argue that only operators without a lexical XP can be grammaticalised. The underlying mechanisms underlying are essentially general economy principles and hence the processes are not language-specific or exceptional. Fifth, the dissertation accounts for optional ellipsis processes that play a crucial role in the derivation of typical comparative subclauses. These processes are not directly related to the structure of degree expressions and hence the elimination of the quantified expression from the subclause; nevertheless, they are shown to be in interaction with the mechanisms underlying Comparative Deletion or the absence thereof.},
  language  = {en}
}
@phdthesis{Schmitt2014,
  author    = {Schmitt, Clemens Nikolaus Zeno},
  title     = {The role of protein metal complexes in the mechanics of Mytilus californianus byssal threads},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-74216},
  school      = {Universit{\"a}t Potsdam},
  pages     = {VIII, 93},
  year      = {2014},
  abstract  = {Protein-metal coordination complexes are well known as active centers in enzymatic catalysis, and to contribute to signal transduction, gas transport, and to hormone function. Additionally, they are now known to contribute as load-bearing cross-links to the mechanical properties of several biological materials, including the jaws of Nereis worms and the byssal threads of marine mussels. The primary aim of this thesis work is to better understand the role of protein-metal cross-links in the mechanical properties of biological materials, using the mussel byssus as a model system. Specifically, the focus is on histidine-metal cross-links as sacrificial bonds in the fibrous core of the byssal thread (Chapter 4) and L-3,4-dihydroxyphenylalanine (DOPA)-metal bonds in the protective thread cuticle (Chapter 5). Byssal threads are protein fibers, which mussels use to attach to various substrates at the seashore. These relatively stiff fibers have the ability to extend up to about 100 \% strain, dissipating large amounts of mechanical energy from crashing waves, for example. Remarkably, following damage from cyclic loading, initial mechanical properties are subsequently recovered by a material-intrinsic self-healing capability. Histidine residues coordinated to transition metal ions in the proteins comprising the fibrous thread core have been suggested as reversible sacrificial bonds that contribute to self-healing; however, this remains to be substantiated in situ. In the first part of this thesis, the role of metal coordination bonds in the thread core was investigated using several spectroscopic methods. In particular, X-ray absorption spectroscopy (XAS) was applied to probe the coordination environment of zinc in Mytilus californianus threads at various stages during stretching and subsequent healing. Analysis of the extended X-ray absorption fine structure (EXAFS) suggests that tensile deformation of threads is correlated with the rupture of Zn-coordination bonds and that self-healing is connected with the reorganization of Zn-coordination bond topologies rather than the mere reformation of Zn-coordination bonds. These findings have interesting implications for the design of self-healing metallopolymers. The byssus cuticle is a protective coating surrounding the fibrous thread core that is both as hard as an epoxy and extensible up to 100 \% strain before cracking. It was shown previously that cuticle stiffness and hardness largely depend on the presence of Fe-DOPA coordination bonds. However, the byssus is known to concentrate a large variety of metals from seawater, some of which are also capable of binding DOPA (e.g. V). Therefore, the question arises whether natural variation of metal composition can affect the mechanical performance of the byssal thread cuticle. To investigate this hypothesis, nanoindentation and confocal Raman spectroscopy were applied to the cuticle of native threads, threads with metals removed (EDTA treated), and threads in which the metal ions in the native tissue were replaced by either Fe or V. Interestingly, replacement of metal ions with either Fe or V leads to the full recovery of native mechanical properties with no statistical difference between each other or the native properties. This likely indicates that a fixed number of metal coordination sites are maintained within the byssal thread cuticle - possibly achieved during thread formation - which may provide an evolutionarily relevant mechanism for maintaining reliable mechanics in an unpredictable environment. While the dynamic exchange of bonds plays a vital role in the mechanical behavior and self-healing in the thread core by allowing them to act as reversible sacrificial bonds, the compatibility of DOPA with other metals allows an inherent adaptability of the thread cuticle to changing circumstances. The requirements to both of these materials can be met by the dynamic nature of the protein-metal cross-links, whereas covalent cross-linking would fail to provide the adaptability of the cuticle and the self-healing of the core. In summary, these studies of the thread core and the thread cuticle serve to underline the important and dynamic roles of protein-metal coordination in the mechanical function of load-bearing protein fibers, such as the mussel byssus.},
  language  = {en}
}
@phdthesis{Schaefer2014,
  author    = {Schaefer, Laura},
  title     = {Synchronisationsph{\"a}nomene myotendin{\"o}ser Oszillationen interagierender neuromuskul{\"a}rer Systeme},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-72445},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {Muskeln oszillieren nachgewiesener Weise mit einer Frequenz um 10 Hz. Doch was geschieht mit myofaszialen Oszillationen, wenn zwei neuromuskul{\"a}re Systeme interagieren? Die Dissertation widmet sich dieser Fragestellung bei isometrischer Interaktion. W{\"a}hrend der Testmessungen ergaben sich Hinweise f{\"u}r das Vorhandensein von m{\"o}glicherweise zwei verschiedenen Formen der Isometrie. Arbeiten zwei Personen isometrisch gegeneinander, k{\"o}nnen subjektiv zwei Modi eingenommen werden: man kann entweder isometrisch halten - der Kraft des Partners widerstehen - oder isometrisch dr{\"u}cken - gegen den isometrischen Widerstand des Partners arbeiten. Daher wurde zus{\"a}tzlich zu den Messungen zur Interaktion zweier Personen an einzelnen Individuen gepr{\"u}ft, ob m{\"o}glicherweise zwei Formen der Isometrie existieren. Die Promotion besteht demnach aus zwei inhaltlich und methodisch getrennten Teilen: I „Single-Isometrie" und II „Paar-Isometrie". F{\"u}r Teil I wurden mithilfe eines pneumatisch betriebenen Systems die hypothetischen Messmodi Halten und Dr{\"u}cken w{\"a}hrend isometrischer Aktion untersucht. Bei n = 10 Probanden erfolgte parallel zur Aufzeichnung des Drucksignals w{\"a}hrend der Messungen die Erfassung der Kraft (DMS) und der Beschleunigung sowie die Aufnahme der mechanischen Muskeloszillationen folgender myotendin{\"o}ser Strukturen via Mechanomyo- (MMG) bzw. Mechanotendografie (MTG): M. triceps brachii (MMGtri), Trizepssehne (MTGtri), M. obliquus externus abdominis (MMGobl). Pro Proband wurden bei 80 \% der MVC sowohl sechs 15-Sekunden-Messungen (jeweils drei im haltenden bzw. dr{\"u}ckenden Modus; Pause: 1 Minute) als auch vier Erm{\"u}dungsmessungen (jeweils zwei im haltenden bzw. dr{\"u}ckenden Modus; Pause: 2 Minuten) durchgef{\"u}hrt. Zum Vergleich der Messmodi Halten und Dr{\"u}cken wurden die Amplituden der myofaszialen Oszillationen sowie die Kraftausdauer herangezogen. Signifikante Unterschiede zwischen dem haltenden und dem dr{\"u}ckenden Modus zeigten sich insbesondere im Bereich der Erm{\"u}dungscharakteristik. So lassen Probanden im haltenden Modus signifikant fr{\"u}her nach als im dr{\"u}ckenden Modus (t(9) = 3,716; p = .005). Im dr{\"u}ckenden Modus macht das l{\"a}ngste isometrische Plateau durchschnittlich 59,4 \% der Gesamtdauer aus, im haltenden sind es 31,6 \% (t(19) = 5,265, p = .000). Die Amplituden der Single-Isometrie-Messungen unterscheiden sich nicht signifikant. Allerdings variieren die Amplituden des MMGobl zwischen den Messungen im dr{\"u}ckenden Modus signifikant st{\"a}rker als im haltenden Modus. Aufgrund dieser teils signifikanten Unterschiede zwischen den beiden Messmodi wurde dieses Setting auch im zweiten Teil „Paar-Isometrie" ber{\"u}cksichtigt. Dort wurden n = 20 Probanden - eingeteilt in zehn gleichgeschlechtliche Paare - w{\"a}hrend isometrischer Interaktion untersucht. Die Sensorplatzierung erfolgte analog zu Teil I. Die Oszillationen der erfassten MTG- sowie MMG-Signale wurden u.a. mit Algorithmen der Nichtlinearen Dynamik auf ihre Koh{\"a}renz hin untersucht. Durch die Paar-Isometrie-Messungen zeigte sich, dass die Muskeln und die Sehnen beider neuromuskul{\"a}rer Systeme bei Interaktion im bekannten Frequenzbereich von 10 Hz oszillieren. Außerdem waren sie in der Lage, sich bei Interaktion so aufeinander abzustimmen, dass sich eine signifikante Koh{\"a}renz entwickelte, die sich von Zufallspaarungen signifikant unterscheidet (Patchanzahl: t(29) = 3,477; p = .002; Summe der 4 l{\"a}ngsten Patches: t(29) = 7,505; p = .000). Es wird der Schluss gezogen, dass neuromuskul{\"a}re Komplement{\"a}rpartner in der Lage sind, sich im Sinne koh{\"a}renten Verhaltens zu synchronisieren. Bez{\"u}glich der Parameter zur Untersuchung der m{\"o}glicherweise vorhandenen zwei Formen der Isometrie zeigte sich bei den Paar-Isometrie-Messungen zwischen Halten und Dr{\"u}cken ein signifikanter Unterschied bei der Erm{\"u}dungscharakteristik sowie bez{\"u}glich der Amplitude der MMGobl. Die Ergebnisse beider Teilstudien best{\"a}rken die Hypothese, dass zwei Formen der Isometrie existieren. Fraglich ist, ob man {\"u}berhaupt von Isometrie sprechen kann, da jede isometrische Muskelaktion aus feinen Oszillationen besteht, die eine per Definition postulierte Isometrie ausschließen. Es wird der Vorschlag unterbreitet, die Isometrie durch den Begriff der Hom{\"o}ometrie auszutauschen. Die Ergebnisse der Paar-Isometrie-Messungen zeigen u.a., dass neuromuskul{\"a}re Systeme in der Lage sind, ihre myotendin{\"o}sen Oszillationen so aufeinander abzustimmen, dass koh{\"a}rentes Verhalten entsteht. Es wird angenommen, dass hierzu beide neuromuskul{\"a}ren Systeme funktionell intakt sein m{\"u}ssen. Das Verfahren k{\"o}nnte f{\"u}r die Diagnostik funktioneller St{\"o}rungen relevant werden.},
  language  = {de}
}
@phdthesis{Pussak2014,
  author    = {Pussak, Marcin},
  title     = {Seismic characterization of geothermal reservoirs by application of the common-reflection-surface stack method and attribute analysis},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-77565},
  school      = {Universit{\"a}t Potsdam},
  pages     = {viii, 140},
  year      = {2014},
  abstract  = {An important contribution of geosciences to the renewable energy production portfolio is the exploration and utilization of geothermal resources. For the development of a geothermal project at great depths a detailed geological and geophysical exploration program is required in the first phase. With the help of active seismic methods high-resolution images of the geothermal reservoir can be delivered. This allows potential transport routes for fluids to be identified as well as regions with high potential of heat extraction to be mapped, which indicates favorable conditions for geothermal exploitation. The presented work investigates the extent to which an improved characterization of geothermal reservoirs can be achieved with the new methods of seismic data processing. The summations of traces (stacking) is a crucial step in the processing of seismic reflection data. The common-reflection-surface (CRS) stacking method can be applied as an alternative for the conventional normal moveout (NMO) or the dip moveout (DMO) stack. The advantages of the CRS stack beside an automatic determination of stacking operator parameters include an adequate imaging of arbitrarily curved geological boundaries, and a significant increase in signal-to-noise (S/N) ratio by stacking far more traces than used in a conventional stack. A major innovation I have shown in this work is that the quality of signal attributes that characterize the seismic images can be significantly improved by this modified type of stacking in particular. Imporoved attribute analysis facilitates the interpretation of seismic images and plays a significant role in the characterization of reservoirs. Variations of lithological and petro-physical properties are reflected by fluctuations of specific signal attributes (eg. frequency or amplitude characteristics). Its further interpretation can provide quality assessment of the geothermal reservoir with respect to the capacity of fluids within a hydrological system that can be extracted and utilized. The proposed methodological approach is demonstrated on the basis on two case studies. In the first example, I analyzed a series of 2D seismic profile sections through the Alberta sedimentary basin on the eastern edge of the Canadian Rocky Mountains. In the second application, a 3D seismic volume is characterized in the surroundings of a geothermal borehole, located in the central part of the Polish basin. Both sites were investigated with the modified and improved stacking attribute analyses. The results provide recommendations for the planning of future geothermal plants in both study areas.},
  language  = {en}
}
@phdthesis{Schulz2014,
  author    = {Schulz, Anneli},
  title     = {Search for gamma-ray emission from bow shocks of runaway stars},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-73905},
  school      = {Universit{\"a}t Potsdam},
  pages     = {123},
  year      = {2014},
  abstract  = {The mystery of the origin of cosmic rays has been tackled for more than hundred years and is still not solved. Cosmic rays are detected with energies spanning more than 10 orders of magnitude and reaching energies up to ~10²¹ eV, far higher than any man-made accelerator can reach. Different theories on the astrophysical objects and processes creating such highly energetic particles have been proposed. A very prominent explanation for a process producing highly energetic particles is shock acceleration. The observation of high-energy gamma rays from supernova remnants, some of them revealing a shell like structure, is clear evidence that particles are accelerated to ultrarelativistic energies in the shocks of these objects. The environments of supernova remnants are complex and challenge detailed modelling of the processes leading to high-energy gamma-ray emission. The study of shock acceleration at bow shocks, created by the supersonic movement of individual stars through the interstellar medium, offers a unique possibility to determine the physical properties of shocks in a less complex environment. The shocked medium is heated by the stellar and the shock excited radiation, leading to thermal infrared emission. 28 bow shocks have been discovered through their infrared emission. Nonthermal radiation in radio and X-ray wavelengths has been detected from two bow shocks, pointing to the existence of relativistic particles in these systems. Theoretical models of the emission processes predict high-energy and very high-energy emission at a flux level in reach of current instruments. This work presents the search for gamma-ray emission from bow shocks of runaway stars in the energy regime from 100MeV to ~100TeV. The search is performed with the large area telescope (LAT) on-board the Fermi satellite and the H.E.S.S. telescopes located in the Khomas Highland in Namibia. The Fermi-LAT was launched in 2008 and is continuously scanning the sky since then. It detects photons with energies from 20MeV to over 300 GeV and has an unprecedented sensitivity. The all-sky coverage allows us to study all 28 bow shocks of runaway stars listed in the E-BOSS catalogue of infrared bow shocks. No significant emission was detected from any of the objects, although predicted by several theoretical models describing the non-thermal emission of bow shocks of runaway stars. The H.E.S.S. experiment is the most sensitive system of imaging atmospheric Cherenkov telescopes. It detects photons from several tens of GeV to ~100TeV. Seven of the bow shocks have been observed with H.E.S.S. and the data analysis is presented in this thesis. The analyses of the very-high energy data did not reveal significant emission from any of the sources either. This work presents the first systematic search for gamma-ray emission from bow shocks of runaway stars. For the first time Fermi-LAT data was specifically analysed to reveal emission from bow shocks of runaway stars. In the TeV regime no searches for emission from theses objects have been published so far, the study presented here is the first in this energy regime. The level of the gamma-ray emission from bow shocks of runaway stars is constrained by the calculated upper limits over six orders in magnitude in energy. The upper limits calculated for the bow shocks of runaway stars in the course of this work, constrain several models. For the best candidate, ζ Ophiuchi, the upper limits in the Fermi-LAT energy range are lower than the predictions by a factor ~5. This challenges the assumptions made in this model and gives valuable input for further modelling approaches. The analyses were performed with the software packages provided by the H.E.S.S. and Fermi collaborations. The development of a unified analysis framework for gamma-ray data, namely GammaLib/ctools, is rapidly progressing within the CTA consortium. Recent implementations and cross-checks with current software frameworks are presented in the Appendix.},
  language  = {en}
}
@phdthesis{Kirchhecker2014,
  author    = {Kirchhecker, Sarah},
  title     = {Renewable imidazolium zwitterions as platform molecules for the synthesis of ionic liquids and materials},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-77412},
  school      = {Universit{\"a}t Potsdam},
  pages     = {136},
  year      = {2014},
  abstract  = {Following the principles of green chemistry, a simple and efficient synthesis of functionalised imidazolium zwitterionic compounds from renewable resources was developed based on a modified one-pot Debus-Radziszewski reaction. The combination of different carbohydrate-derived 1,2-dicarbonyl compounds and amino acids is a simple way to modulate the properties and introduce different functionalities. A representative compound was assessed as an acid catalyst, and converted into acidic ionic liquids by reaction with several strong acids. The reactivity of the double carboxylic functionality was explored by esterification with long and short chain alcohols, as well as functionalised amines, which led to the straightforward formation of surfactant-like molecules or bifunctional esters and amides. One of these di-esters is currently being investigated for the synthesis of poly(ionic liquids). The functionalisation of cellulose with one of the bifunctional esters was investigated and preliminary tests employing it for the functionalisation of filter papers were carried out successfully. The imidazolium zwitterions were converted into ionic liquids via hydrothermal decarboxylation in flow, a benign and scalable technique. This method provides access to imidazolium ionic liquids via a simple and sustainable methodology, whilst completely avoiding contamination with halide salts. Different ionic liquids can be generated depending on the functionality contained in the ImZw precursor. Two alanine-derived ionic liquids were assessed for their physicochemical properties and applications as solvents for the dissolution of cellulose and the Heck coupling.},
  language  = {en}
}
@phdthesis{Videla2014,
  author    = {Videla, Santiago},
  title     = {Reasoning on the response of logical signaling networks with answer set programming},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-71890},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {Deciphering the functioning of biological networks is one of the central tasks in systems biology. In particular, signal transduction networks are crucial for the understanding of the cellular response to external and internal perturbations. Importantly, in order to cope with the complexity of these networks, mathematical and computational modeling is required. We propose a computational modeling framework in order to achieve more robust discoveries in the context of logical signaling networks. More precisely, we focus on modeling the response of logical signaling networks by means of automated reasoning using Answer Set Programming (ASP). ASP provides a declarative language for modeling various knowledge representation and reasoning problems. Moreover, available ASP solvers provide several reasoning modes for assessing the multitude of answer sets. Therefore, leveraging its rich modeling language and its highly efficient solving capacities, we use ASP to address three challenging problems in the context of logical signaling networks: learning of (Boolean) logical networks, experimental design, and identification of intervention strategies. Overall, the contribution of this thesis is three-fold. Firstly, we introduce a mathematical framework for characterizing and reasoning on the response of logical signaling networks. Secondly, we contribute to a growing list of successful applications of ASP in systems biology. Thirdly, we present a software providing a complete pipeline for automated reasoning on the response of logical signaling networks.},
  language  = {en}
}
@phdthesis{Mayer2014,
  author    = {Mayer, Michael},
  title     = {Pulsar wind nebulae at high energies},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-71504},
  school      = {Universit{\"a}t Potsdam},
  pages     = {142},
  year      = {2014},
  abstract  = {Pulsar wind nebulae (PWNe) are the most abundant TeV gamma-ray emitters in the Milky Way. The radiative emission of these objects is powered by fast-rotating pulsars, which donate parts of their rotational energy into winds of relativistic particles. This thesis presents an in-depth study of the detected population of PWNe at high energies. To outline general trends regarding their evolutionary behaviour, a time-dependent model is introduced and compared to the available data. In particular, this work presents two exceptional PWNe which protrude from the rest of the population, namely the Crab Nebula and N 157B. Both objects are driven by pulsars with extremely high rotational energy loss rates. Accordingly, they are often referred to as energetic twins. Modelling the non-thermal multi-wavelength emission of N157B gives access to specific properties of this object, like the magnetic field inside the nebula. Comparing the derived parameters to those of the Crab Nebula reveals large intrinsic differences between the two PWNe. Possible origins of these differences are discussed in context of the resembling pulsars. Compared to the TeV gamma-ray regime, the number of detected PWNe is much smaller in the MeV-GeV gamma-ray range. In the latter range, the Crab Nebula stands out by the recent detection of gamma-ray flares. In general, the measured flux enhancements on short time scales of days to weeks were not expected in the theoretical understanding of PWNe. In this thesis, the variability of the Crab Nebula is analysed using data from the Fermi Large Area Telescope (Fermi-LAT). For the presented analysis, a new gamma-ray reconstruction method is used, providing a higher sensitivity and a lower energy threshold compared to previous analyses. The derived gamma-ray light curve of the Crab Nebula is investigated for flares and periodicity. The detected flares are analysed regarding their energy spectra, and their variety and commonalities are discussed. In addition, a dedicated analysis of the flare which occurred in March 2013 is performed. The derived short-term variability time scale is roughly 6h, implying a small region inside the Crab Nebula to be responsible for the enigmatic flares. The most promising theories explaining the origins of the flux eruptions and gamma-ray variability are discussed in detail. In the technical part of this work, a new analysis framework is presented. The introduced software, called gammalib/ctools, is currently being developed for the future CTA observa- tory. The analysis framework is extensively tested using data from the H. E. S. S. experiment. To conduct proper data analysis in the likelihood framework of gammalib/ctools, a model describing the distribution of background events in H.E.S.S. data is presented. The software provides the infrastructure to combine data from several instruments in one analysis. To study the gamma-ray emitting PWN population, data from Fermi-LAT and H. E. S. S. are combined in the likelihood framework of gammalib/ctools. In particular, the spectral peak, which usually lies in the overlap energy regime between these two instruments, is determined with the presented analysis framework. The derived measurements are compared to the predictions from the time-dependent model. The combined analysis supports the conclusion of a diverse population of gamma-ray emitting PWNe.},
  language  = {en}
}
@phdthesis{RoggeSolti2014,
  author    = {Rogge-Solti, Andreas},
  title     = {Probabilistic Estimation of Unobserved Process Events},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-70426},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {Organizations try to gain competitive advantages, and to increase customer satisfaction. To ensure the quality and efficiency of their business processes, they perform business process management. An important part of process management that happens on the daily operational level is process controlling. A prerequisite of controlling is process monitoring, i.e., keeping track of the performed activities in running process instances. Only by process monitoring can business analysts detect delays and react to deviations from the expected or guaranteed performance of a process instance. To enable monitoring, process events need to be collected from the process environment. When a business process is orchestrated by a process execution engine, monitoring is available for all orchestrated process activities. Many business processes, however, do not lend themselves to automatic orchestration, e.g., because of required freedom of action. This situation is often encountered in hospitals, where most business processes are manually enacted. Hence, in practice it is often inefficient or infeasible to document and monitor every process activity. Additionally, manual process execution and documentation is prone to errors, e.g., documentation of activities can be forgotten. Thus, organizations face the challenge of process events that occur, but are not observed by the monitoring environment. These unobserved process events can serve as basis for operational process decisions, even without exact knowledge of when they happened or when they will happen. An exemplary decision is whether to invest more resources to manage timely completion of a case, anticipating that the process end event will occur too late. This thesis offers means to reason about unobserved process events in a probabilistic way. We address decisive questions of process managers (e.g., "when will the case be finished?", or "when did we perform the activity that we forgot to document?") in this thesis. As main contribution, we introduce an advanced probabilistic model to business process management that is based on a stochastic variant of Petri nets. We present a holistic approach to use the model effectively along the business process lifecycle. Therefore, we provide techniques to discover such models from historical observations, to predict the termination time of processes, and to ensure quality by missing data management. We propose mechanisms to optimize configuration for monitoring and prediction, i.e., to offer guidance in selecting important activities to monitor. An implementation is provided as a proof of concept. For evaluation, we compare the accuracy of the approach with that of state-of-the-art approaches using real process data of a hospital. Additionally, we show its more general applicability in other domains by applying the approach on process data from logistics and finance.},
  language  = {en}
}
@phdthesis{Trost2014,
  author    = {Trost, Gerda},
  title     = {Poly(A) Polymerase 1 (PAPS1) influences organ size and pathogen response in Arabidopsis thaliana},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-72345},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {Polyadenylation of pre-mRNAs is critical for efficient nuclear export, stability, and translation of the mature mRNAs, and thus for gene expression. The bulk of pre-mRNAs are processed by canonical nuclear poly(A) polymerase (PAPS). Both vertebrate and higher-plant genomes encode more than one isoform of this enzyme, and these are coexpressed in different tissues. However, in neither case is it known whether the isoforms fulfill different functions or polyadenylate distinct subsets of pre-mRNAs. This thesis shows that the three canonical nuclear PAPS isoforms in Arabidopsis are functionally specialized owing to their evolutionarily divergent C-terminal domains. A moderate loss-of-function mutant in PAPS1 leads to increase in floral organ size, whereas leaf size is reduced. A strong loss-of-function mutation causes a male gametophytic defect, whereas a weak allele leads to reduced leaf growth. By contrast, plants lacking both PAPS2 and PAPS4 function are viable with wild-type leaf growth. Polyadenylation of SMALL AUXIN UP RNA (SAUR) mRNAs depends specifically on PAPS1 function. The resulting reduction in SAUR activity in paps1 mutants contributes to their reduced leaf growth, providing a causal link between polyadenylation of specific pre-mRNAs by a particular PAPS isoform and plant growth. Additionally, opposite effects of PAPS1 on leaf and flower growth reflect the different identities of these organs. The overgrowth of paps1 mutant petals is due to increased recruitment of founder cells into early organ primordia whereas the reduced leaf size is due to an ectopic pathogen response. This constitutive immune response leads to increased resistance to the biotrophic oomycete Hyaloperonospora arabidopsidis and reflects activation of the salicylic acid-independent signalling pathway downstream of ENHANCED DISEASE SUSCEPTIBILITY1 (EDS1)/PHYTOALEXIN DEFICIENT4 (PAD4). Immune responses are accompanied by intracellular redox changes. Consistent with this, the redox-status of the chloroplast is altered in paps1-1 mutants. The molecular effects of the paps1-1 mutation were analysed using an RNA sequencing approach that distinguishes between long- and short tailed mRNA. The results shown here suggest the existence of an additional layer of regulation in plants and possibly vertebrate gene expression, whereby the relative activities of canonical nuclear PAPS isoforms control de novo synthesized poly(A) tail length and hence expression of specific subsets of mRNAs.},
  language  = {en}
}
@phdthesis{Bamberg2014,
  author    = {Bamberg, Marlene},
  title     = {Planetary mapping tools applied to floor-fractured craters on Mars},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-72104},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {Planetary research is often user-based and requires considerable skill, time, and effort. Unfortunately, self-defined boundary conditions, definitions, and rules are often not documented or not easy to comprehend due to the complexity of research. This makes a comparison to other studies, or an extension of the already existing research, complicated. Comparisons are often distorted, because results rely on different, not well defined, or even unknown boundary conditions. The purpose of this research is to develop a standardized analysis method for planetary surfaces, which is adaptable to several research topics. The method provides a consistent quality of results. This also includes achieving reliable and comparable results and reducing the time and effort of conducting such studies. A standardized analysis method is provided by automated analysis tools that focus on statistical parameters. Specific key parameters and boundary conditions are defined for the tool application. The analysis relies on a database in which all key parameters are stored. These databases can be easily updated and adapted to various research questions. This increases the flexibility, reproducibility, and comparability of the research. However, the quality of the database and reliability of definitions directly influence the results. To ensure a high quality of results, the rules and definitions need to be well defined and based on previously conducted case studies. The tools then produce parameters, which are obtained by defined geostatistical techniques (measurements, calculations, classifications). The idea of an automated statistical analysis is tested to proof benefits but also potential problems of this method. In this study, I adapt automated tools for floor-fractured craters (FFCs) on Mars. These impact craters show a variety of surface features, occurring in different Martian environments, and having different fracturing origins. They provide a complex morphological and geological field of application. 433 FFCs are classified by the analysis tools due to their fracturing process. Spatial data, environmental context, and crater interior data are analyzed to distinguish between the processes involved in floor fracturing. Related geologic processes, such as glacial and fluvial activity, are too similar to be separately classified by the automated tools. Glacial and fluvial fracturing processes are merged together for the classification. The automated tools provide probability values for each origin model. To guarantee the quality and reliability of the results, classification tools need to achieve an origin probability above 50 \%. This analysis method shows that 15 \% of the FFCs are fractured by intrusive volcanism, 20 \% by tectonic activity, and 43 \% by water \& ice related processes. In total, 75 \% of the FFCs are classified to an origin type. This can be explained by a combination of origin models, superposition or erosion of key parameters, or an unknown fracturing model. Those features have to be manually analyzed in detail. Another possibility would be the improvement of key parameters and rules for the classification. This research shows that it is possible to conduct an automated statistical analysis of morphologic and geologic features based on analysis tools. Analysis tools provide additional information to the user and are therefore considered assistance systems.},
  language  = {en}
}