@article{OlejkoCywińskiBald2016, author = {Olejko, Lydia and Cywiński, Piotr J. and Bald, Ilko}, title = {An ion-controlled four-color fluorescent telomeric switch on DNA origami structures}, series = {Nanoscale}, volume = {8}, journal = {Nanoscale}, publisher = {RSC Publ.}, address = {Cambridge}, issn = {2040-3372}, doi = {10.1039/C6NR00119J}, pages = {10339 -- 10347}, year = {2016}, abstract = {The folding of single-stranded telomeric DNA into guanine (G) quadruplexes is a conformational change that plays a major role in sensing and drug targeting. The telomeric DNA can be placed on DNA origami nanostructures to make the folding process extremely selective for K+ ions even in the presence of high Na+ concentrations. Here, we demonstrate that the K+-selective G-quadruplex formation is reversible when using a cryptand to remove K+ from the G-quadruplex. We present a full characterization of the reversible switching between single-stranded telomeric DNA and G-quadruplex structures using F{\"o}rster resonance energy transfer (FRET) between the dyes fluorescein (FAM) and cyanine3 (Cy3). When attached to the DNA origami platform, the G-quadruplex switch can be incorporated into more complex photonic networks, which is demonstrated for a three-color and a four-color FRET cascade from FAM over Cy3 and Cy5 to IRDye700 with G-quadruplex-Cy3 acting as a switchable transmitter.}, language = {en} } @article{MarkovicCarrizoKaercheretal.2017, author = {Markovic, Danijela and Carrizo, Savrina F. and Kaercher, Oskar and Walz, Ariane and David, Jonathan N. W.}, title = {Vulnerability of European freshwater catchments to climate change}, series = {Global change biology}, volume = {23}, journal = {Global change biology}, publisher = {Wiley}, address = {Hoboken}, issn = {1354-1013}, doi = {10.1111/gcb.13657}, pages = {3567 -- 3580}, year = {2017}, abstract = {Climate change is expected to exacerbate the current threats to freshwater ecosystems, yet multifaceted studies on the potential impacts of climate change on freshwater biodiversity at scales that inform management planning are lacking. The aim of this study was to fill this void through the development of a novel framework for assessing climate change vulnerability tailored to freshwater ecosystems. The three dimensions of climate change vulnerability are as follows: (i) exposure to climate change, (ii) sensitivity to altered environmental conditions and (iii) resilience potential. Our vulnerability framework includes 1685 freshwater species of plants, fishes, molluscs, odonates, amphibians, crayfish and turtles alongside key features within and between catchments, such as topography and connectivity. Several methodologies were used to combine these dimensions across a variety of future climate change models and scenarios. The resulting indices were overlaid to assess the vulnerability of European freshwater ecosystems at the catchment scale (18 783 catchments). The Balkan Lakes Ohrid and Prespa and Mediterranean islands emerge as most vulnerable to climate change. For the 2030s, we showed a consensus among the applied methods whereby up to 573 lake and river catchments are highly vulnerable to climate change. The anthropogenic disruption of hydrological habitat connectivity by dams is the major factor reducing climate change resilience. A gap analysis demonstrated that the current European protected area network covers <25\% of the most vulnerable catchments. Practical steps need to be taken to ensure the persistence of freshwater biodiversity under climate change. Priority should be placed on enhancing stakeholder cooperation at the major basin scale towards preventing further degradation of freshwater ecosystems and maintaining connectivity among catchments. The catchments identified as most vulnerable to climate change provide preliminary targets for development of climate change conservation management and mitigation strategies.}, language = {en} } @article{ChaabeneNegraBouguezzietal.2018, author = {Chaabene, Helmi and Negra, Yassine and Bouguezzi, Raja and Capranica, Laura and Franchini, Emerson and Prieske, Olaf and Hbacha, Hamdi and Granacher, Urs}, title = {Tests for the Assessment of Sport-Specific Performance in Olympic Combat Sports}, series = {Frontiers in Physiology}, volume = {9}, journal = {Frontiers in Physiology}, publisher = {Frontiers Research Foundation}, address = {Lausanne}, issn = {1664-042X}, doi = {10.3389/fphys.2018.00386}, pages = {1 -- 18}, year = {2018}, abstract = {The regular monitoring of physical fitness and sport-specific performance is important in elite sports to increase the likelihood of success in competition. This study aimed to systematically review and to critically appraise the methodological quality, validation data, and feasibility of the sport-specific performance assessment in Olympic combat sports like amateur boxing, fencing, judo, karate, taekwondo, and wrestling. A systematic search was conducted in the electronic databases PubMed, Google-Scholar, and Science-Direct up to October 2017. Studies in combat sports were included that reported validation data (e.g., reliability, validity, sensitivity) of sport-specific tests. Overall, 39 studies were eligible for inclusion in this review. The majority of studies (74\%) contained sample sizes <30 subjects. Nearly, 1/3 of the reviewed studies lacked a sufficient description (e.g., anthropometrics, age, expertise level) of the included participants. Seventy-two percent of studies did not sufficiently report inclusion/exclusion criteria of their participants. In 62\% of the included studies, the description and/or inclusion of a familiarization session (s) was either incomplete or not existent. Sixty-percent of studies did not report any details about the stability of testing conditions. Approximately half of the studies examined reliability measures of the included sport-specific tests (intraclass correlation coefficient [ICC] = 0.43-1.00). Content validity was addressed in all included studies, criterion validity (only the concurrent aspect of it) in approximately half of the studies with correlation coefficients ranging from r = -0.41 to 0.90. Construct validity was reported in 31\% of the included studies and predictive validity in only one. Test sensitivity was addressed in 13\% of the included studies. The majority of studies (64\%) ignored and/or provided incomplete information on test feasibility and methodological limitations of the sport-specific test. In 28\% of the included studies, insufficient information or a complete lack of information was provided in the respective field of the test application. Several methodological gaps exist in studies that used sport-specific performance tests in Olympic combat sports. Additional research should adopt more rigorous validation procedures in the application and description of sport-specific performance tests in Olympic combat sports.}, language = {en} } @article{BondueBilginWarschburger2020, author = {Bond{\"u}, Rebecca and Bilgin, Ayten and Warschburger, Petra}, title = {Justice sensitivity and rejection sensitivity as predictors and outcomes of eating disorder pathology}, series = {The international journal of eating disorders}, volume = {53}, journal = {The international journal of eating disorders}, number = {6}, publisher = {Wiley}, address = {New York, NY}, issn = {0276-3478}, doi = {10.1002/eat.23273}, pages = {926 -- 936}, year = {2020}, abstract = {Objective: Rejection sensitivity and justice sensitivity are personality traits that are characterized by frequent perceptions and intense adverse responses to negative social cues. Whereas there is good evidence for associations between rejection sensitivity, justice sensitivity, and internalizing problems, no longitudinal studies have investigated their association with eating disorder (ED) pathology so far. Thus, the present study examined longitudinal relations between rejection sensitivity, justice sensitivity, and ED pathology. Method: Participants (N = 769) reported on their rejection sensitivity, justice sensitivity, and ED pathology at 9-19 (T1), 11-21 (T2), and 14-22 years of age (T3). Results: Latent cross-lagged models showed longitudinal associations between ED pathology and anxious rejection sensitivity, observer and victim justice sensitivity. T1 and T2 ED pathology predicted higher T2 and T3 anxious rejection sensitivity, respectively. In turn, T2 anxious rejection sensitivity predicted more T3 ED pathology. T1 observer justice sensitivity predicted more T2 ED pathology, which predicted higher T3 observer justice sensitivity. Furthermore, T1 ED pathology predicted higher T2 victim justice sensitivity. Discussion: Rejection sensitivity-particularly anxious rejection sensitivity-and justice sensitivity may be involved in the maintenance or worsening of ED pathology and should be considered by future research and in prevention and treatment of ED pathology. Also, mental health problems may increase rejection sensitivity and justice sensitivity traits in the long term.}, language = {en} } @article{StegenwallnerSchuetzAdani2020, author = {Stegenwallner-Sch{\"u}tz, Maja and Adani, Flavia}, title = {Production of referring expressions by children with ASD}, series = {Language acquisition : a journal of developmental linguistics}, volume = {27}, journal = {Language acquisition : a journal of developmental linguistics}, number = {3}, publisher = {Routledge, Taylor \& Francis Group}, address = {Abingdon}, issn = {1048-9223}, doi = {10.1080/10489223.2020.1769625}, pages = {276 -- 305}, year = {2020}, abstract = {This study examines the discourse basis for referent accessibility and its relation to the choice of referring expressions by children with Autism Spectrum Disorder (ASD) and typically developing children. The aim is to delineate how the linguistic and extra-linguistic context affects referent accessibility to the speaker. The study also examines the degree to which accessibility effects are modulated by cognitive factors such as working memory capacity. In the study, the contrast levels between the referent and a competitor (one contrast/two contrasts) and the syntactic prominence of the referent (subject/object position in the preceding question) were manipulated in an elicited production task. The results provide evidence that the referring expressions of children with ASD correlate with the discourse status of referents to a similar extent as in typically developing controls. All children were more likely to refer with lexical NPs to referents that contrasted on two levels with a highly prominent competitor, compared to referents that contrasted on one level. They were also more likely to produce pronouns for referents previously mentioned in the subject than the object position. The effect of both discourse factors was modulated by the age and working memory capacity of the children with and without ASD. Accordingly, the study suggests that children with ASD do not generally differ from children with typical development in their referential choices when the discourse status of a referent allows them to model the referent's accessibility from their own discourse perspective in a way that is modulated by working memory capacity.}, language = {en} } @article{GotznerRomoli2022, author = {Gotzner, Nicole and Romoli, Jacopo}, title = {Meaning and alternatives}, series = {Annual review of linguistics}, volume = {8}, journal = {Annual review of linguistics}, publisher = {Annual Reviews}, address = {Palo Alto}, issn = {2333-9691}, doi = {10.1146/annurev-linguistics-031220-012013}, pages = {213 -- 234}, year = {2022}, abstract = {Alternatives and competition in language are pervasive at all levels of linguistic analysis. More specifically, alternatives have been argued to play a prominent role in an ever-growing class of phenomena in the investigation of natural language meaning. In this article, we focus on scalar implicatures, as they are arguably the most paradigmatic case of an alternative-based phenomenon. We first review the main challenge for theories of alternatives, the so-called symmetry problem, and we briefly discuss how it has shaped the different approaches to alternatives. We then turn to two more recent challenges concerning scalar diversity and the inferences of sentences with multiple scalars. Finally, we describe several related alternative-based phenomena and recent conceptual approaches to alternatives. As we discuss, while important progress has been made, much more work is needed both on the theoretical side and on understanding the empirical landscape better.}, language = {en} } @article{DeusdaraLealSamprognaMohorCuartasetal.2022, author = {Deusdar{\´a}-Leal, Karinne and Samprogna Mohor, Guilherme and Cuartas, Luz Adriana and Seluchi, Marcelo E. and Marengo, Jose A. and Zhang, Rong and Broedel, Elisangela and Amore, Diogo de Jesus and Alval{\´a}, Regina C. S. and Cunha, Ana Paula M. A. and Gon{\c{c}}alves, Jos{\´e} A. C.}, title = {Trends and climate elasticity of streamflow in south-eastern Brazil basins}, series = {Water}, volume = {14}, journal = {Water}, number = {14}, publisher = {MDPI}, address = {Basel}, issn = {2073-4441}, doi = {10.3390/w14142245}, pages = {25}, year = {2022}, abstract = {Trends in streamflow, rainfall and potential evapotranspiration (PET) time series, from 1970 to 2017, were assessed for five important hydrological basins in Southeastern Brazil. The concept of elasticity was also used to assess the streamflow sensitivity to changes in climate variables, for annual data and 5-, 10- and 20-year moving averages. Significant negative trends in streamflow and rainfall and significant increasing trend in PET were detected. For annual analysis, elasticity revealed that 1\% decrease in rainfall resulted in 1.21-2.19\% decrease in streamflow, while 1\% increase in PET induced different reductions percentages in streamflow, ranging from 2.45\% to 9.67\%. When both PET and rainfall were computed to calculate the elasticity, results were positive for some basins. Elasticity analysis considering 20-year moving averages revealed that impacts on the streamflow were cumulative: 1\% decrease in rainfall resulted in 1.83-4.75\% decrease in streamflow, while 1\% increase in PET induced 3.47-28.3\% decrease in streamflow. This different temporal response may be associated with the hydrological memory of the basins. Streamflow appears to be more sensitive in less rainy basins. This study provides useful information to support strategic government decisions, especially when the security of water resources and drought mitigation are considered in face of climate change.}, language = {en} } @article{TawfikOndrakWinterleitneretal.2022, author = {Tawfik, Ahmed Y. and Ondrak, Robert and Winterleitner, Gerd and Mutti, Maria}, title = {Source rock evaluation and petroleum system modeling of the East Beni Suef Basin, north Eastern Desert, Egypt}, series = {Journal of African earth sciences}, volume = {193}, journal = {Journal of African earth sciences}, publisher = {Elsevier}, address = {Oxford}, issn = {1464-343X}, doi = {10.1016/j.jafrearsci.2022.104575}, pages = {21}, year = {2022}, abstract = {This study deals with the East Beni Suef Basin (Eastern Desert, Egypt) and aims to evaluate the source-generative potential, reconstruct the burial and thermal history, examine the most influential parameters on thermal maturity modeling, and improve on the models already published for the West Beni Suef to ultimately formulate a complete picture of the whole basin evolution. Source rock evaluation was carried out based on TOC, Rock-Eval pyrolysis, and visual kerogen petrography analyses. Three kerogen types (II, II/III, and III) are distinguished in the East Beni Suef Basin, where the Abu Roash "F" Member acts as the main source rock with good to excellent source potential, oil-prone mainly type II kerogen, and immature to marginal maturity levels. The burial history shows four depositional and erosional phases linked with the tectonic evolution of the basin. A hiatus (due to erosion or non-deposition) has occurred during the Late Eocene-Oligocene in the East Beni Suef Basin, while the West Beni Suef Basin has continued subsiding. Sedimentation began later (Middle to Late Albian) with lower rates in the East Beni Suef Basin compared with the West Beni Suef Basin (Early Albian). The Abu Roash "F" source rock exists in the early oil window with a present-day transformation ratio of about 19\% and 21\% in the East and West Beni Suef Basin, respectively, while the Lower Kharita source rock, which is only recorded in the West Beni Suef Basin, has reached the late oil window with a present-day transformation ratio of about 70\%. The magnitude of erosion and heat flow have proportional and mutual effects on thermal maturity. We present three possible scenarios of basin modeling in the East Beni Suef Basin concerning the erosion from the Apollonia and Dabaa formations. Results of this work can serve as a basis for subsequent 2D and/or 3D basin modeling, which are highly recommended to further investigate the petroleum system evolution of the Beni Suef Basin.}, language = {en} } @article{RisticIlicAndjelkovicetal.2022, author = {Ristic, Goran S. and Ilic, Stefan D. and Andjelkovic, Marko S. and Duane, Russell and Palma, Alberto J. and Lalena, Antonio M. and Krstic, Milos D. and Jaksic, Aleksandar B.}, title = {Sensitivity and fading of irradiated RADFETs with different gate voltages}, series = {Nuclear Instruments and Methods in Physics Research Section A}, volume = {1029}, journal = {Nuclear Instruments and Methods in Physics Research Section A}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0168-9002}, doi = {10.1016/j.nima.2022.166473}, pages = {7}, year = {2022}, abstract = {The radiation-sensitive field-effect transistors (RADFETs) with an oxide thickness of 400 nm are irradiated with gate voltages of 2, 4 and 6 V, and without gate voltage. A detailed analysis of the mechanisms responsible for the creation of traps during irradiation is performed. The creation of the traps in the oxide, near and at the silicon/silicon-dioxide (Si/SiO2) interface during irradiation is modelled very well. This modelling can also be used for other MOS transistors containing SiO2. The behaviour of radiation traps during postirradiation annealing is analysed, and the corresponding functions for their modelling are obtained. The switching traps (STs) do not have significant influence on threshold voltage shift, and two radiation-induced trap types fit the fixed traps (FTs) very well. The fading does not depend on the positive gate voltage applied during irradiation, but it is twice lower in case there is no gate voltage. A new dosimetric parameter, called the Golden Ratio (GR), is proposed, which represents the ratio between the threshold voltage shift after irradiation and fading after spontaneous annealing. This parameter can be useful for comparing MOS dosimeters.}, language = {en} } @article{AlouiTayechArbiMejrietal.2022, author = {Aloui, Ali and Tayech, Amel and Arbi Mejri, Mohamed and Makhlouf, Issam and Clark, Cain C. T. and Granacher, Urs and Zouhal, Hassane and Ben Abderrahman, Abderraouf}, title = {Reliability and Validity of a New Taekwondo-Specific Change-of-Direction Speed Test With Striking Techniques in Elite Taekwondo Athletes: A Pilot Study}, series = {Frontiers in Physiology}, volume = {13}, journal = {Frontiers in Physiology}, publisher = {Frontiers}, address = {Lausanne, Schweiz}, issn = {1664-042X}, doi = {10.3389/fphys.2022.774546}, pages = {1 -- 15}, year = {2022}, abstract = {The purpose of this study was to examine the test-retest reliability, and convergent and discriminative validity of a new taekwondo-specific change-of-direction (COD) speed test with striking techniques (TST) in elite taekwondo athletes. Twenty (10 males and 10 females) elite (athletes who compete at national level) and top-elite (athletes who compete at national and international level) taekwondo athletes with an average training background of 8.9 ± 1.3 years of systematic taekwondo training participated in this study. During the two-week test-retest period, various generic performance tests measuring COD speed, balance, speed, and jump performance were carried out during the first week and as a retest during the second week. Three TST trials were conducted with each athlete and the best trial was used for further analyses. The relevant performance measure derived from the TST was the time with striking penalty (TST-TSP). TST-TSP performances amounted to 10.57 ± 1.08 s for males and 11.74 ± 1.34 s for females. The reliability analysis of the TST performance was conducted after logarithmic transformation, in order to address the problem of heteroscedasticity. In both groups, the TST demonstrated a high relative test-retest reliability (intraclass correlation coefficients and 90\% compatibility limits were 0.80 and 0.47 to 0.93, respectively). For absolute reliability, the TST's typical error of measurement (TEM), 90\% compatibility limits, and magnitudes were 4.6\%, 3.4 to 7.7, for males, and 5.4\%, 3.9 to 9.0, for females. The homogeneous sample of taekwondo athletes meant that the TST's TEM exceeded the usual smallest important change (SIC) with 0.2 effect size in the two groups. The new test showed mostly very large correlations with linear sprint speed (r = 0.71 to 0.85) and dynamic balance (r = -0.71 and -0.74), large correlations with COD speed (r = 0.57 to 0.60) and vertical jump performance (r = -0.50 to -0.65), and moderate correlations with horizontal jump performance (r = -0.34 to -0.45) and static balance (r = -0.39 to -0.44). Top-elite athletes showed better TST performances than elite counterparts. Receiver operating characteristic analysis indicated that the TST effectively discriminated between top-elite and elite taekwondo athletes. In conclusion, the TST is a valid, and sensitive test to evaluate the COD speed with taekwondo specific skills, and reliable when considering ICC and TEM. Although the usefulness of the TST is questioned to detect small performance changes in the present population, the TST can detect moderate changes in taekwondo-specific COD speed.}, language = {en} }