@article{HuangStoofLeichsenringLiuetal.2021, author = {Huang, Sichao and Stoof-Leichsenring, Kathleen R. and Liu, Sisi and Courtin, Jeremy and Andreev, Andrej A. and Pestryakova, Luidmila. A. and Herzschuh, Ulrike}, title = {Plant sedimentary ancient DNA from Far East Russia covering the last 28,000 years reveals different assembly rules in cold and warm climates}, series = {Frontiers in Ecology and Evolution}, volume = {9}, journal = {Frontiers in Ecology and Evolution}, publisher = {Frontiers Media}, address = {Lausanne}, issn = {2296-701X}, doi = {10.3389/fevo.2021.763747}, pages = {15}, year = {2021}, abstract = {Woody plants are expanding into the Arctic in response to the warming climate. The impact on arctic plant communities is not well understood due to the limited knowledge about plant assembly rules. Records of past plant diversity over long time series are rare. Here, we applied sedimentary ancient DNA metabarcoding targeting the P6 loop of the chloroplast trnL gene to a sediment record from Lake Ilirney (central Chukotka, Far Eastern Russia) covering the last 28 thousand years. Our results show that forb-rich steppe-tundra and dwarf-shrub tundra dominated during the cold climate before 14 ka, while deciduous erect-shrub tundra was abundant during the warm period since 14 ka. Larix invasion during the late Holocene substantially lagged behind the likely warmest period between 10 and 6 ka, where the vegetation biomass could be highest. We reveal highest richness during 28-23 ka and a second richness peak during 13-9 ka, with both periods being accompanied by low relative abundance of shrubs. During the cold period before 14 ka, rich plant assemblages were phylogenetically clustered, suggesting low genetic divergence in the assemblages despite the great number of species. This probably originates from environmental filtering along with niche differentiation due to limited resources under harsh environmental conditions. In contrast, during the warmer period after 14 ka, rich plant assemblages were phylogenetically overdispersed. This results from a high number of species which were found to harbor high genetic divergence, likely originating from an erratic recruitment process in the course of warming. Some of our evidence may be of relevance for inferring future arctic plant assembly rules and diversity changes. By analogy to the past, we expect a lagged response of tree invasion. Plant richness might overshoot in the short term; in the long-term, however, the ongoing expansion of deciduous shrubs will eventually result in a phylogenetically more diverse community.}, language = {en} } @article{StuenziKruseBoikeetal.2022, author = {Stuenzi, Simone Maria and Kruse, Stefan and Boike, Julia and Herzschuh, Ulrike and Oehme, Alexander and Pestryakova, Luidmila A. and Westermann, Sebastian and Langer, Moritz}, title = {Thermohydrological impact of forest disturbances on ecosystem-protected permafrost}, series = {Journal of geophysical research : Biogeosciences}, volume = {127}, journal = {Journal of geophysical research : Biogeosciences}, number = {5}, publisher = {American Geophysical Union}, address = {Washington}, issn = {2169-8953}, doi = {10.1029/2021JG006630}, pages = {24}, year = {2022}, abstract = {Boreal forests cover over half of the global permafrost area and protect underlying permafrost. Boreal forest development, therefore, has an impact on permafrost evolution, especially under a warming climate. Forest disturbances and changing climate conditions cause vegetation shifts and potentially destabilize the carbon stored within the vegetation and permafrost. Disturbed permafrost-forest ecosystems can develop into a dry or swampy bush- or grasslands, shift toward broadleaf- or evergreen needleleaf-dominated forests, or recover to the pre-disturbance state. An increase in the number and intensity of fires, as well as intensified logging activities, could lead to a partial or complete ecosystem and permafrost degradation. We study the impact of forest disturbances (logging, surface, and canopy fires) on the thermal and hydrological permafrost conditions and ecosystem resilience. We use a dynamic multilayer canopy-permafrost model to simulate different scenarios at a study site in eastern Siberia. We implement expected mortality, defoliation, and ground surface changes and analyze the interplay between forest recovery and permafrost. We find that forest loss induces soil drying of up to 44\%, leading to lower active layer thicknesses and abrupt or steady decline of a larch forest, depending on disturbance intensity. Only after surface fires, the most common disturbances, inducing low mortality rates, forests can recover and overpass pre-disturbance leaf area index values. We find that the trajectory of larch forests after surface fires is dependent on the precipitation conditions in the years after the disturbance. Dryer years can drastically change the direction of the larch forest development within the studied period.}, language = {en} } @article{AngelopoulosOverduinWestermannetal.2020, author = {Angelopoulos, Michael and Overduin, Pier Paul and Westermann, Sebastian and Tronicke, Jens and Strauss, Jens and Schirrmeister, Lutz and Biskaborn, Boris and Liebner, Susanne and Maksimov, Georgii and Grigoriev, Mikhail N. and Grosse, Guido}, title = {Thermokarst lake to lagoon transitions in Eastern Siberia}, series = {Journal of geophysical research : Earth surface}, volume = {125}, journal = {Journal of geophysical research : Earth surface}, number = {10}, publisher = {American Geophysical Union}, address = {Washington}, issn = {2169-9003}, doi = {10.1029/2019JF005424}, pages = {21}, year = {2020}, abstract = {As the Arctic coast erodes, it drains thermokarst lakes, transforming them into lagoons, and, eventually, integrates them into subsea permafrost. Lagoons represent the first stage of a thermokarst lake transition to a marine setting and possibly more saline and colder upper boundary conditions. In this research, borehole data, electrical resistivity surveying, and modeling of heat and salt diffusion were carried out at Polar Fox Lagoon on the Bykovsky Peninsula, Siberia. Polar Fox Lagoon is a seasonally isolated water body connected to Tiksi Bay through a channel, leading to hypersaline waters under the ice cover. The boreholes in the center of the lagoon revealed floating ice and a saline cryotic bed underlain by a saline cryotic talik, a thin ice-bearing permafrost layer, and unfrozen ground. The bathymetry showed that most of the lagoon had bedfast ice in spring. In bedfast ice areas, the electrical resistivity profiles suggested that an unfrozen saline layer was underlain by a thick layer of refrozen talik. The modeling showed that thermokarst lake taliks can refreeze when submerged in saltwater with mean annual bottom water temperatures below or slightly above 0 degrees C. This occurs, because the top-down chemical degradation of newly formed ice-bearing permafrost is slower than the refreezing of the talik. Hence, lagoons may precondition taliks with a layer of ice-bearing permafrost before encroachment by the sea, and this frozen layer may act as a cap on gas migration out of the underlying talik.}, language = {en} } @article{WieczorekKolmogorovKruseetal.2017, author = {Wieczorek, Mareike and Kolmogorov, Alexei and Kruse, Stefan and Jacobsen, Inga and Nitze, Ingmar and Nikolaev, Anatoly N. and Heinrich, Ingo and Pestryakova, Luidmila Agafyevna and Herzschuh, Ulrike}, title = {Disturbance-effects on treeline larch-stands in the lower Kolyma River area (NE Siberia)}, series = {Silva Fennica : a quarterly journal for forest science}, volume = {51}, journal = {Silva Fennica : a quarterly journal for forest science}, number = {3}, publisher = {The Finnish Society of Forest Science}, address = {Helsinki}, issn = {0037-5330}, doi = {10.14214/sf.1666}, pages = {20}, year = {2017}, abstract = {Tree stands in the boreal treeline ecotone are, in addition to climate change, impacted by disturbances such as fire, water-related disturbances and logging. We aim to understand how these disturbances affect growth, age structure, and spatial patterns of larch stands in the north-eastern Siberian treeline ecotone (lower Kolyma River region), an insufficiently researched region. Stand structure of Larix cajanderi Mayr was studied at seven sites impacted by disturbances. Maximum tree age ranged from 44 to 300 years. Young to medium-aged stands had, independent of disturbance type, the highest stand densities with over 4000 larch trees per ha. These sites also had the highest growth rates for tree height and stem diameter. Overall lowest stand densities were found in a polygonal field at the northern end of the study area, with larches growing in distinct " tree islands". At all sites, saplings are significantly clustered. Differences in fire severity led to contrasting stand structures with respect to tree, recruit, and overall stand densities. While a low severity fire resulted in low-density stands with high proportions of small and young larches, high severity fires resulted in high-density stands with high proportions of big trees. At waterdisturbed sites, stand structure varied between waterlogged and drained sites and latitude. These mixed effects of climate and disturbance make it difficult to predict future stand characteristics and the treeline position.}, language = {en} } @article{TianCaoDallmeyeretal.2018, author = {Tian, Fang and Cao, Xianyong and Dallmeyer, Anne and Lohmann, Gerrit and Zhang, Xu and Ni, Jian and Andreev, Andrei and Anderson, Patricia M. and Lozhkin, Anatoly V. and Bezrukova, Elena and Rudaya, Natalia and Xu, Qinghai and Herzschuh, Ulrike}, title = {Biome changes and their inferred climatic drivers in northern and eastern continental Asia at selected times since 40 cal ka BP}, series = {Vegetation History and Archaeobotany}, volume = {27}, journal = {Vegetation History and Archaeobotany}, number = {2}, publisher = {Springer}, address = {New York}, issn = {0939-6314}, doi = {10.1007/s00334-017-0653-8}, pages = {365 -- 379}, year = {2018}, abstract = {Recent global warming is pronounced in high-latitude regions (e.g. northern Asia), and will cause the vegetation to change. Future vegetation trends (e.g. the "arctic greening") will feed back into atmospheric circulation and the global climate system. Understanding the nature and causes of past vegetation changes is important for predicting the composition and distribution of future vegetation communities. Fossil pollen records from 468 sites in northern and eastern Asia were biomised at selected times between 40 cal ka bp and today. Biomes were also simulated using a climate-driven biome model and results from the two approaches compared in order to help understand the mechanisms behind the observed vegetation changes. The consistent biome results inferred by both approaches reveal that long-term and broad-scale vegetation patterns reflect global- to hemispheric-scale climate changes. Forest biomes increase around the beginning of the late deglaciation, become more widespread during the early and middle Holocene, and decrease in the late Holocene in fringe areas of the Asian Summer Monsoon. At the southern and southwestern margins of the taiga, forest increases in the early Holocene and shows notable species succession, which may have been caused by winter warming at ca. 7 cal ka bp. At the northeastern taiga margin (central Yakutia and northeastern Siberia), shrub expansion during the last deglaciation appears to prevent the permafrost from thawing and hinders the northward expansion of evergreen needle-leaved species until ca. 7 cal ka bp. The vegetation-climate disequilibrium during the early Holocene in the taiga-tundra transition zone suggests that projected climate warming will not cause a northward expansion of evergreen needle-leaved species.}, language = {en} } @misc{Herzschuh2020, author = {Herzschuh, Ulrike}, title = {Legacy of the Last Glacial on the present-day distribution of deciduous versus evergreen boreal forests}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {2}, issn = {1866-8372}, doi = {10.25932/publishup-52405}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-524057}, pages = {11}, year = {2020}, abstract = {Issue Despite their rather similar climatic conditions, eastern Eurasia and northern North America are largely covered by different plant functional types (deciduous or evergreen boreal forest) composed of larch or pine, spruce and fir, respectively. I propose that these deciduous and evergreen boreal forests represent alternative quasi-stable states, triggered by their different northern tree refugia that reflect the different environmental conditions experienced during the Last Glacial. Evidence This view is supported by palaeoecological and environmental evidence. Once established, Asian larch forests are likely to have stabilized through a complex vegetation-fire-permafrost soil-climate feedback system. Conclusion With respect to future forest developments, this implies that Asian larch forests are likely to be governed by long-term trajectories and are therefore largely resistant to natural climate variability on time-scales shorter than millennia. The effects of regional human impact and anthropogenic global warming might, however, cause certain stability thresholds to be crossed, meaning that irreversible transitions occur and resulting in marked consequences for ecosystem services on these human-relevant time-scales.}, language = {en} } @article{Herzschuh2019, author = {Herzschuh, Ulrike}, title = {Legacy of the Last Glacial on the present-day distribution of deciduous versus evergreen boreal forests}, series = {Global ecology and biogeography : a journal of macroecology}, volume = {29}, journal = {Global ecology and biogeography : a journal of macroecology}, number = {2}, publisher = {John Wiley \& Sons, Inc.}, address = {Hoboken}, issn = {1466-822X}, doi = {10.1111/geb.13018}, pages = {198 -- 206}, year = {2019}, abstract = {Issue Despite their rather similar climatic conditions, eastern Eurasia and northern North America are largely covered by different plant functional types (deciduous or evergreen boreal forest) composed of larch or pine, spruce and fir, respectively. I propose that these deciduous and evergreen boreal forests represent alternative quasi-stable states, triggered by their different northern tree refugia that reflect the different environmental conditions experienced during the Last Glacial. Evidence This view is supported by palaeoecological and environmental evidence. Once established, Asian larch forests are likely to have stabilized through a complex vegetation-fire-permafrost soil-climate feedback system. Conclusion With respect to future forest developments, this implies that Asian larch forests are likely to be governed by long-term trajectories and are therefore largely resistant to natural climate variability on time-scales shorter than millennia. The effects of regional human impact and anthropogenic global warming might, however, cause certain stability thresholds to be crossed, meaning that irreversible transitions occur and resulting in marked consequences for ecosystem services on these human-relevant time-scales.}, language = {en} } @phdthesis{Holm2020, author = {Holm, Stine}, title = {Methanogenic communities and metaplasmidome-encoded functions in permafrost environments exposed to thaw}, school = {Universit{\"a}t Potsdam}, pages = {VI, 243}, year = {2020}, abstract = {This thesis investigates how the permafrost microbiota responds to global warming. In detail, the constraints behind methane production in thawing permafrost were linked to methanogenic activity, abundance and composition. Furthermore, this thesis offers new insights into microbial adaptions to the changing environmental conditions during global warming. This was assesed by investigating the potential ecological relevant functions encoded by plasmid DNA within the permafrost microbiota. Permafrost of both interglacial and glacial origin spanning the Holocene to the late Pleistocene, including Eemian, were studied during long-term thaw incubations. Furthermore, several permafrost cores of different stratigraphy, soil type and vegetation cover were used to target the main constraints behind methane production during short-term thaw simulations. Short- and long-term incubations simulating thaw with and without the addition of substrate were combined with activity measurements, amplicon and metagenomic sequencing of permanently frozen and seasonally thawed active layer. Combined, it allowed to address the following questions. i) What constraints methane production when permafrost thaws and how is this linked to methanogenic activity, abundance and composition? ii) How does the methanogenic community composition change during long-term thawing conditions? iii) Which potential ecological relevant functions are encoded by plasmid DNA in active layer soils? The major outcomes of this thesis are as follows. i) Methane production from permafrost after long-term thaw simulation was found to be constrained mainly by the abundance of methanogens and the archaeal community composition. Deposits formed during periods of warmer temperatures and increased precipitation, (here represented by deposits from the Late Pleistocene of both interstadial and interglacial periods) were found to respond strongest to thawing conditions and to contain an archaeal community dominated by methanogenic archaea (40\% and 100\% of all detected archaea). Methanogenic population size and carbon density were identified as main predictors for potential methane production in thawing permafrost in short-term incubations when substrate was sufficiently available. ii) Besides determining the methanogenic activity after long-term thaw, the paleoenvironmental conditions were also found to influence the response of the methanogenic community composition. Substantial shifts within methanogenic community structure and a drop in diversity were observed in deposits formed during warmer periods, but not in deposits from stadials, when colder and drier conditions occurred. Overall, a shift towards a dominance of hydrogenotrophic methanogens was observed in all samples, except for the oldest interglacial deposits from the Eemian, which displayed a potential dominance of acetoclastic methanogens. The Eemian, which is discussed to serve as an analogue to current climate conditions, contained highly active methanogenic communities. However, all potential limitation of methane production after permafrost thaw, it means methanogenic community structure, methanogenic population size, and substrate pool might be overcome after permafrost had thawed on the long-term. iii) Enrichments with soil from the seasonally thawed active layer revealed that its plasmid DNA ('metaplasmidome') carries stress-response genes. In particular it encoded antibiotic resistance genes, heavy metal resistance genes, cold shock proteins and genes encoding UV-protection. Those are functions that are directly involved in the adaptation of microbial communities to stresses in polar environments. It was further found that metaplasmidomes from the Siberian active layer originate mainly from Gammaproteobacteria. By applying enrichment cultures followed by plasmid DNA extraction it was possible to obtain a higher average contigs length and significantly higher recovery of plasmid sequences than from extracting plasmid sequences from metagenomes. The approach of analyzing 'metaplasmidomes' established in this thesis is therefore suitable for studying the ecological role of plasmids in polar environments in general. This thesis emphasizes that including microbial community dynamics have the potential to improve permafrost-carbon projections. Microbially mediated methane release from permafrost environments may significantly impact future climate change. This thesis identified drivers of methanogenic composition, abundance and activity in thawing permafrost landscapes. Finally, this thesis underlines the importance to study how the current warming Arctic affects microbial communities in order to gain more insight into microbial response and adaptation strategies.}, language = {en} } @article{CaoTianDallmeyeretal.2019, author = {Cao, Xianyong and Tian, Fang and Dallmeyer, Anne and Herzschuh, Ulrike}, title = {Northern Hemisphere biome changes (> 30 degrees N) since 40 cal ka BP and their driving factors inferred from model-data comparisons}, series = {Quaternary science reviews : the international multidisciplinary research and review journal}, volume = {220}, journal = {Quaternary science reviews : the international multidisciplinary research and review journal}, publisher = {Elsevier}, address = {Oxford}, issn = {0277-3791}, doi = {10.1016/j.quascirev.2019.07.034}, pages = {291 -- 309}, year = {2019}, abstract = {Ongoing and past biome transitions are generally assigned to climate and atmospheric changes (e.g. temperature, precipitation, CO2), but the major regional factors or factor combinations that drive vegetation change often remain unknown. Modelling studies applying ensemble runs can help to partition the effects of the different drivers. Such studies require careful validation with observational data. In this study, fossil pollen records from 741 sites in Europe, 728 sites in North America, and 418 sites in Asia (extracted from terrestrial archives including lake sediments) are used to reconstruct biomes at selected time slices between 40 cal ka BP (calibrated thousand years before present) and today. These results are used to validate Northern Hemisphere biome distributions (>30 degrees N) simulated by the biome model BIOME4 that has been forced with climate data simulated by a General Circulation model. Quantitative comparisons between pollen- and model-based results show a generally good fit at a broad spatial scale. Mismatches occur in central-arid Asia with a broader extent of grassland throughout the last 40 ka (likely due to the over-representation of Artemisia and Chenopodiaceae pollen) and in Europe with over-estimation of tundra at 0 cal ka BP (likely due to human impacts to some extent). Sensitivity analysis reveals that broad-scale biome changes follow the global signal of major postglacial temperature change, although the climatic variables vary in their regional and temporal importance. Temperature is the dominant variable in Europe and other rather maritime areas for biome changes between 21 and 14 ka, while precipitation is highly important in the arid inland regions of Asia and North America. The ecophysiological effect of changes in the atmospheric CO2-concentration has the highest impact during this transition than in other intervals. With respect to modern vegetation in the course of global warming, our findings imply that vegetation change in the Northern Hemisphere may be strongly limited by effective moisture changes, i.e. the combined effect of temperature and precipitation, particularly in inland areas. (C) 2019 Elsevier Ltd. All rights reserved.}, language = {en} } @article{NitzeGrosseJonesetal.2017, author = {Nitze, Ingmar and Grosse, Guido and Jones, Benjamin M. and Arp, Christopher D. and Ulrich, Mathias and Fedorov, Alexander and Veremeeva, Alexandra}, title = {Landsat-Based Trend Analysis of Lake Dynamics across Northern Permafrost Regions}, series = {Remote sensing}, volume = {9}, journal = {Remote sensing}, publisher = {MDPI}, address = {Basel}, issn = {2072-4292}, doi = {10.3390/rs9070640}, pages = {28}, year = {2017}, abstract = {Lakes are a ubiquitous landscape feature in northern permafrost regions. They have a strong impact on carbon, energy and water fluxes and can be quite responsive to climate change. The monitoring of lake change in northern high latitudes, at a sufficiently accurate spatial and temporal resolution, is crucial for understanding the underlying processes driving lake change. To date, lake change studies in permafrost regions were based on a variety of different sources, image acquisition periods and single snapshots, and localized analysis, which hinders the comparison of different regions. Here, we present a methodology based on machine-learning based classification of robust trends of multi-spectral indices of Landsat data (TM, ETM+, OLI) and object-based lake detection, to analyze and compare the individual, local and regional lake dynamics of four different study sites (Alaska North Slope, Western Alaska, Central Yakutia, Kolyma Lowland) in the northern permafrost zone from 1999 to 2014. Regional patterns of lake area change on the Alaska North Slope (-0.69\%), Western Alaska (-2.82\%), and Kolyma Lowland (-0.51\%) largely include increases due to thermokarst lake expansion, but more dominant lake area losses due to catastrophic lake drainage events. In contrast, Central Yakutia showed a remarkable increase in lake area of 48.48\%, likely resulting from warmer and wetter climate conditions over the latter half of the study period. Within all study regions, variability in lake dynamics was associated with differences in permafrost characteristics, landscape position (i.e., upland vs. lowland), and surface geology. With the global availability of Landsat data and a consistent methodology for processing the input data derived from robust trends of multi-spectral indices, we demonstrate a transferability, scalability and consistency of lake change analysis within the northern permafrost region.}, language = {en} }