@article{FeldmannMaduarSanteretal.2016, author = {Feldmann, David and Maduar, Salim R. and Santer, Mark and Lomadze, Nino and Vinogradova, Olga I. and Santer, Svetlana}, title = {Manipulation of small particles at solid liquid interface}, series = {Scientific reports}, volume = {6}, journal = {Scientific reports}, publisher = {Nature Publishing Group}, address = {London}, issn = {2045-2322}, doi = {10.1038/srep36443}, pages = {10}, year = {2016}, abstract = {The strong adhesion of sub-micron sized particles to surfaces is a nuisance, both for removing contaminating colloids from surfaces and for conscious manipulation of particles to create and test novel micro/nano-scale assemblies. The obvious idea of using detergents to ease these processes suffers from a lack of control: the action of any conventional surface-modifying agent is immediate and global. With photosensitive azobenzene containing surfactants we overcome these limitations. Such photo-soaps contain optical switches (azobenzene molecules), which upon illumination with light of appropriate wavelength undergo reversible trans-cis photo-isomerization resulting in a subsequent change of the physico-chemical molecular properties. In this work we show that when a spatial gradient in the composition of trans- and cis- isomers is created near a solid-liquid interface, a substantial hydrodynamic flow can be initiated, the spatial extent of which can be set, e.g., by the shape of a laser spot. We propose the concept of light induced diffusioosmosis driving the flow, which can remove, gather or pattern a particle assembly at a solid-liquid interface. In other words, in addition to providing a soap we implement selectivity: particles are mobilized and moved at the time of illumination, and only across the illuminated area.}, language = {en} } @misc{FeldmannMaduarSanteretal.2016, author = {Feldmann, David and Maduar, Salim R. and Santer, Mark and Lomadze, Nino and Vinogradova, Olga I. and Santer, Svetlana}, title = {Manipulation of small particles at solid liquid interface}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-100338}, pages = {10}, year = {2016}, abstract = {The strong adhesion of sub-micron sized particles to surfaces is a nuisance, both for removing contaminating colloids from surfaces and for conscious manipulation of particles to create and test novel micro/nano-scale assemblies. The obvious idea of using detergents to ease these processes suffers from a lack of control: the action of any conventional surface-modifying agent is immediate and global. With photosensitive azobenzene containing surfactants we overcome these limitations. Such photo-soaps contain optical switches (azobenzene molecules), which upon illumination with light of appropriate wavelength undergo reversible trans-cis photo-isomerization resulting in a subsequent change of the physico-chemical molecular properties. In this work we show that when a spatial gradient in the composition of trans- and cis- isomers is created near a solid-liquid interface, a substantial hydrodynamic flow can be initiated, the spatial extent of which can be set, e.g., by the shape of a laser spot. We propose the concept of light induced diffusioosmosis driving the flow, which can remove, gather or pattern a particle assembly at a solid-liquid interface. In other words, in addition to providing a soap we implement selectivity: particles are mobilized and moved at the time of illumination, and only across the illuminated area.}, language = {en} } @article{FeldmannLevermann2016, author = {Feldmann, Johannes and Levermann, Anders}, title = {Similitude of ice dynamics against scaling of geometry and physical parameters}, series = {The Cryosphere : TC ; an interactive open access journal of the European Geosciences Union}, volume = {10}, journal = {The Cryosphere : TC ; an interactive open access journal of the European Geosciences Union}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1994-0416}, doi = {10.5194/tc-10-1753-2016}, pages = {1753 -- 1769}, year = {2016}, abstract = {The concept of similitude is commonly employed in the fields of fluid dynamics and engineering but rarely used in cryospheric research. Here we apply this method to the problem of ice flow to examine the dynamic similitude of isothermal ice sheets in shallow-shelf approximation against the scaling of their geometry and physical parameters. Carrying out a dimensional analysis of the stress balance we obtain dimensionless numbers that characterize the flow. Requiring that these numbers remain the same under scaling we obtain conditions that relate the geometric scaling factors, the parameters for the ice softness, surface mass balance and basal friction as well as the ice-sheet intrinsic response time to each other. We demonstrate that these scaling laws are the same for both the (two-dimensional) flow-line case and the three-dimensional case. The theoretically predicted ice-sheet scaling behavior agrees with results from numerical simulations that we conduct in flow-line and three-dimensional conceptual setups. We further investigate analytically the implications of geometric scaling of ice sheets for their response time. With this study we provide a framework which, under several assumptions, allows for a fundamental comparison of the ice-dynamic behavior across different scales. It proves to be useful in the design of conceptual numerical model setups and could also be helpful for designing laboratory glacier experiments. The concept might also be applied to real-world systems, e.g., to examine the response times of glaciers, ice streams or ice sheets to climatic perturbations.}, language = {en} } @article{FischerBaderAbel2016, author = {Fischer, Jost Leonhardt and Bader, Rolf and Abel, Markus}, title = {Aeroacoustical coupling and synchronization of organ pipes}, series = {The journal of the Acoustical Society of America}, volume = {140}, journal = {The journal of the Acoustical Society of America}, publisher = {American Institute of Physics}, address = {Melville}, issn = {0001-4966}, doi = {10.1121/1.4964135}, pages = {2344 -- 2351}, year = {2016}, abstract = {A synchronization experiment on two mutual interacting organ pipes is compared with a theoretical model which takes into account the coupling mechanisms by the underlying first principles of fluid mechanics and aeroacoustics. The focus is on the Arnold-tongue, a mathematical object in the parameter space of detuning and coupling strength which quantitatively captures the interaction of the synchronized sound sources. From the experiment, a nonlinearly shaped Arnold-tongue is obtained, describing the coupling of the synchronized pipe-pipe system. This is in contrast to the linear shaped Arnold-tongue found in a preliminary experiment of the coupled system pipe-loudspeaker. To understand the experimental result, a coarse-grained model of two nonlinear coupled self-sustained oscillators is developed. The model, integrated numerically, is in very good agreement with the synchronization experiment for separation distances of the pipes in the far field and in the intermediate field. The methods introduced open the door for a deeper understanding of the fundamental processes of sound generation and the coupling mechanisms on mutual interacting acoustic oscillators. (C) 2016 Acoustical Society of America.}, language = {en} } @phdthesis{Fournier2016, author = {Fournier, Yori}, title = {Dynamics of the rise of magnetic flux tubes in stellar interiors}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-394533}, school = {Universit{\"a}t Potsdam}, pages = {xii, 98}, year = {2016}, abstract = {In sonnen{\"a}hnlichen Sternen erh{\"a}lt ein Dynamo-Mechanismus die Magnetfelder. Der Babcock-Leighton-Dynamo beruht auf einem solchen Mechanismus und erfordert insbesondere die Existenz von magnetischen Flussr{\"o}hren. Man nimmt an, dass magnetische Flussr{\"o}hren am Boden der Konvetionszone entstehen und durch Auftrieb bis zur Oberfl{\"a}che steigen. Es wird ein spezielles Dynamomodell vorgeschlagen, in dem der Verz{\"o}gerungseffekt durch das Aufsteigen der Flussr{\"o}hren ber{\"u}cksichtigt wird. Die vorliegende Dissertation besch{\"a}ftigt sich mit der Anwendbarkeit des Babcock-Leighton-Dynamos auf andere Sterne. Zu diesem Zweck versuchen wir, die Aufstiegszeiten von magnetischen Flussr{\"o}hren mit Hilfe von kompressiblen MHD-Simulationen in sp{\"a}rischen Kugelschalen mit Dichteschichtung zu bestimmen und einzugrenzen. Derartige Simulationen sind allerdings nur in einem unrealistischen Parameterbereich m{\"o}glich. Deshalb ist eine Skalierungsrelation n{\"o}tig, die die Ergebnisse auf realistische physikalische Regimes {\"u}bertr{\"a}gt. Wir erweitern fr{\"u}here Arbeiten zu Skalierungsrelationen in 2D und leiten ein allgemeines Skalierungsgesetz ab, das f{\"u}r 2D- und 3D-Flussr{\"o}hren g{\"u}ltig ist. In einem umfangreichen Satz von numerischen Simulationen zeigen wir, dass die abgeleitete Skalierungsrelation auch im vollst{\"a}ndig nichtlinearen Fall gilt. Wir haben damit ein Gesetz f{\"u}r die Aufstiegszeit von magnetischen Flussr{\"o}hren gefunden, dass in jedem sonnen{\"a}hnlichen Stern G{\"u}ltigkeit hat. Schließlich implementieren wir dieses Gesetz in einem Dynamomodell mit Verz{\"o}gerungsterm. Die Simulationen eines solchen verz{\"o}gerten Flussr{\"o}hren/Babcock-Leighton-Dynamos auf der Basis der Meanfield-Formulierung f{\"u}hrten auf ein neues Dynamo-Regime, das nur bei Anwesenheit der Verz{\"o}gerung existiert. Die erforderlichen Verz{\"o}gerungen sind von der Gr{\"o}{\"y}enordnung der Zyklusl{\"a}nge, die resultierenden Magnetfelder sind schw{\"a}cher als die {\"A}quipartitions-Feldst{\"a}rke. Dieses neue Regime zeigt, dass auch bei sehr langen Aufstiegszeiten der Flussr{\"o}hren/Babcock-Leighton-Dynamo noch nichtzerfallende L{\"o}sungen liefern und daher auf ein breites Spektrum von Sternen anwendbar sein kann.}, language = {en} } @article{FrielerMengelLevermann2016, author = {Frieler, Katja and Mengel, M. and Levermann, Anders}, title = {Delaying future sea-level rise by storing water in Antarctica}, series = {Earth system dynamics}, volume = {7}, journal = {Earth system dynamics}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {2190-4979}, doi = {10.5194/esd-7-203-2016}, pages = {203 -- 210}, year = {2016}, abstract = {Even if greenhouse gas emissions were stopped today, sea level would continue to rise for centuries, with the long-term sea-level commitment of a 2 degrees C warmer world significantly exceeding 2 m. In view of the potential implications for coastal populations and ecosystems worldwide, we investigate, from an ice-dynamic perspective, the possibility of delaying sea-level rise by pumping ocean water onto the surface of the Antarctic ice sheet. We find that due to wave propagation ice is discharged much faster back into the ocean than would be expected from a pure advection with surface velocities. The delay time depends strongly on the distance from the coastline at which the additional mass is placed and less strongly on the rate of sea-level rise that is mitigated. A millennium-scale storage of at least 80\% of the additional ice requires placing it at a distance of at least 700 km from the coastline. The pumping energy required to elevate the potential energy of ocean water to mitigate the currently observed 3 mmyr(-1) will exceed 7\% of the current global primary energy supply. At the same time, the approach offers a comprehensive protection for entire coastlines particularly including regions that cannot be protected by dikes.}, language = {en} } @article{GanopolskiWinkelmannSchellnhuber2016, author = {Ganopolski, A. and Winkelmann, Ricarda and Schellnhuber, Hans Joachim}, title = {Critical insolation-CO2 relation for diagnosing past and future glacial inception}, series = {Nature : the international weekly journal of science}, volume = {529}, journal = {Nature : the international weekly journal of science}, publisher = {Nature Publ. Group}, address = {London}, issn = {0028-0836}, doi = {10.1038/nature16494}, pages = {200 -- U159}, year = {2016}, abstract = {The past rapid growth of Northern Hemisphere continental ice sheets, which terminated warm and stable climate periods, is generally attributed to reduced summer insolation in boreal latitudes(1-3). Yet such summer insolation is near to its minimum at present(4), and there are no signs of a new ice age(5). This challenges our understanding of the mechanisms driving glacial cycles and our ability to predict the next glacial inception(6). Here we propose a critical functional relationship between boreal summer insolation and global carbon dioxide (CO2) concentration, which explains the beginning of the past eight glacial cycles and might anticipate future periods of glacial inception. Using an ensemble of simulations generated by an Earth system model of intermediate complexity constrained by palaeoclimatic data, we suggest that glacial inception was narrowly missed before the beginning of the Industrial Revolution. The missed inception can be accounted for by the combined effect of relatively high late-Holocene CO2 concentrations and the low orbital eccentricity of the Earth(7). Additionally, our analysis suggests that even in the absence of human perturbations no substantial build-up of ice sheets would occur within the next several thousand years and that the current interglacial would probably last for another 50,000 years. However, moderate anthropogenic cumulative CO2 emissions of 1,000 to 1,500 gigatonnes of carbon will postpone the next glacial inception by at least 100,000 years(8,9). Our simulations demonstrate that under natural conditions alone the Earth system would be expected to remain in the present delicately balanced interglacial climate state, steering clear of both large-scale glaciation of the Northern Hemisphere and its complete deglaciation, for an unusually long time.}, language = {en} } @article{GeHeYan2016, author = {Ge, J. X. and He, J. H. and Yan, Huirong}, title = {Effects of turbulent dust grain motion to interstellar chemistry}, series = {Monthly notices of the Royal Astronomical Society}, volume = {455}, journal = {Monthly notices of the Royal Astronomical Society}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {0035-8711}, doi = {10.1093/mnras/stv2560}, pages = {3570 -- 3587}, year = {2016}, abstract = {Theoretical studies have revealed that dust grains are usually moving fast through the turbulent interstellar gas, which could have significant effects upon interstellar chemistry by modifying grain accretion. This effect is investigated in this work on the basis of numerical gas-grain chemical modelling. Major features of the grain motion effect in the typical environment of dark clouds (DC) can be summarized as follows: (1) decrease of gas-phase (both neutral and ionic) abundances and increase of surface abundances by up to 2-3 orders of magnitude; (2) shifts of the existing chemical jumps to earlier evolution ages for gas-phase species and to later ages for surface species by factors of about 10; (3) a few exceptional cases in which some species turn out to be insensitive to this effect and some other species can show opposite behaviours too. These effects usually begin to emerge from a typical DC model age of about 10(5) yr. The grain motion in a typical cold neutral medium (CNM) can help overcome the Coulomb repulsive barrier to enable effective accretion of cations on to positively charged grains. As a result, the grain motion greatly enhances the abundances of some gas-phase and surface species by factors up to 2-6 or more orders of magnitude in the CNM model. The grain motion effect in a typical molecular cloud (MC) is intermediate between that of the DC and CNM models, but with weaker strength. The grain motion is found to be important to consider in chemical simulations of typical interstellar medium.}, language = {en} } @article{GeigerFrielerLevermann2016, author = {Geiger, Tobias and Frieler, Katja and Levermann, Anders}, title = {High-income does not protect against hurricane losses}, series = {Environmental research letters}, volume = {11}, journal = {Environmental research letters}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1748-9326}, doi = {10.1088/1748-9326/11/8/084012}, pages = {10}, year = {2016}, abstract = {Damage due to tropical cyclones accounts for more than 50\% of all meteorologically-induced economic losses worldwide. Their nominal impact is projected to increase substantially as the exposed population grows, per capita income increases, and anthropogenic climate change manifests. So far, historical losses due to tropical cyclones have been found to increase less than linearly with a nation's affected gross domestic product (GDP). Here we show that for the United States this scaling is caused by a sub-linear increase with affected population while relative losses scale super-linearly with per capita income. The finding is robust across a multitude of empirically derived damage models that link the storm's wind speed, exposed population, and per capita GDP to reported losses. The separation of both socio-economic predictors strongly affects the projection of potential future hurricane losses. Separating the effects of growth in population and per-capita income, per hurricane losses with respect to national GDP are projected to triple by the end of the century under unmitigated climate change, while they are estimated to decrease slightly without the separation.}, language = {en} } @misc{GessnerGuehr2016, author = {Gessner, Oliver and G{\"u}hr, Markus}, title = {Monitoring Ultrafast Chemical Dynamics by Time-Domain X-ray Photo- and Auger-Electron Spectroscopy}, series = {Accounts of chemical research}, volume = {49}, journal = {Accounts of chemical research}, publisher = {American Chemical Society}, address = {Washington}, issn = {0001-4842}, doi = {10.1021/acs.accounts.5b00361}, pages = {138 -- 145}, year = {2016}, abstract = {The directed flow of charge and energy is at the heart of all chemical processes. Extraordinary efforts are underway to monitor and understand the concerted motion of electrons and nuclei with ever increasing spatial and temporal sensitivity. The element specificity, chemical sensitivity, and temporal resolution of ultrafast X-ray spectroscopy techniques hold great promise to provide new insight into the fundamental interactions underlying chemical dynamics in systems ranging from isolated molecules to application-like devices. Here, we focus on the potential of ultrafast X-ray spectroscopy techniques based on the detection of photo- and Auger electrons to provide new fundamental insight into photochemical processes of systems with various degrees of complexity. Isolated nucleobases provide an excellent testing ground for our most fundamental understanding of intramolecular coupling between electrons and nuclei beyond the traditionally applied Born-Oppenheimer approximation. Ultrafast electronic relaxation dynamics enabled by the breakdown of this approximation is the major component of the nucleobase photoprotection mechanisms. Transient X-ray induced Auger electron spectroscopy on photoexcited thymine molecules provides atomic-site specific details of the extremely efficient coupling that converts potentially bond changing ultraviolet photon energy into benign heat. In particular, the time-dependent spectral shift of a specific Auger band is sensitive to the length of a single bond within the molecule. The X-ray induced Auger transients show evidence for an electronic transition out of the initially excited state within only similar to 200 fs in contrast to theoretically predicted picosecond population trapping behind a reaction barrier. Photoinduced charge transfer dynamics between transition metal complexes and semiconductor nanostructures are of central importance for many emerging energy and climate relevant technologies. Numerous demonstrations of photovoltaic and photocatalytic activity have been performed based on the combination of strong light absorption in dye molecules with charge separation and transport in adjacent semiconductor nanostructures. However, a fundamental understanding of the enabling and limiting dynamics on critical atomic length- and time scales is often still lacking. Femtosecond time-resolved X-ray photoelectron spectroscopy is employed to gain a better understanding of a short-lived intermediate that may be linked to the unexpectedly limited performance of ZnO based dye-sensitized solar cells by delaying the generation of free charge carriers. The transient spectra strongly suggest that photoexcited dye molecules attached to ZnO nanocrystals inject their charges into the substrate within less than 1 ps but the electrons are then temporarily trapped at the surface of the semiconductor in direct vicinity of the injecting molecules. The experiments are extended to monitor the electronic response of the semiconductor substrate to the collective injection from a monolayer of dye molecules and the subsequent electron-ion recombination dynamics. The results indicate some qualitative similarities but quantitative differences between the recombination dynamics at molecule-semiconductor interfaces and previously studied bulk-surface electron-hole recombination dynamics in photoexcited semiconductors.}, language = {en} } @article{GhoshCherstvyGrebenkovetal.2016, author = {Ghosh, Surya K. and Cherstvy, Andrey G. and Grebenkov, Denis S. and Metzler, Ralf}, title = {Anomalous, non-Gaussian tracer diffusion in crowded two-dimensional environments}, series = {NEW JOURNAL OF PHYSICS}, volume = {18}, journal = {NEW JOURNAL OF PHYSICS}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1367-2630}, doi = {10.1088/1367-2630/18/1/013027}, pages = {16}, year = {2016}, abstract = {A topic of intense current investigation pursues the question of how the highly crowded environment of biological cells affects the dynamic properties of passively diffusing particles. Motivated by recent experiments we report results of extensive simulations of the motion of a finite sized tracer particle in a heterogeneously crowded environment made up of quenched distributions of monodisperse crowders of varying sizes in finite circular two-dimensional domains. For given spatial distributions of monodisperse crowders we demonstrate how anomalous diffusion with strongly non-Gaussian features arises in this model system. We investigate both biologically relevant situations of particles released either at the surface of an inner domain or at the outer boundary, exhibiting distinctly different features of the observed anomalous diffusion for heterogeneous distributions of crowders. Specifically we reveal an asymmetric spreading of tracers even at moderate crowding. In addition to the mean squared displacement (MSD) and local diffusion exponent we investigate the magnitude and the amplitude scatter of the time averaged MSD of individual tracer trajectories, the non-Gaussianity parameter, and the van Hove correlation function. We also quantify how the average tracer diffusivity varies with the position in the domain with a heterogeneous radial distribution of crowders and examine the behaviour of the survival probability and the dynamics of the tracer survival probability. Inter alia, the systems we investigate are related to the passive transport of lipid molecules and proteins in two-dimensional crowded membranes or the motion in colloidal solutions or emulsions in effectively two-dimensional geometries, as well as inside supercrowded, surface adhered cells.}, language = {en} } @article{GhoshCherstvyPetrovetal.2016, author = {Ghosh, Surya K. and Cherstvy, Andrey G. and Petrov, Eugene P. and Metzler, Ralf}, title = {Interactions of rod-like particles on responsive elastic sheets}, series = {Soft matter}, journal = {Soft matter}, publisher = {RSC}, address = {London}, issn = {1744-6848}, doi = {10.1039/C6SM01522K}, year = {2016}, abstract = {What are the physical laws of the mutual interactions of objects bound to cell membranes, such as various membrane proteins or elongated virus particles? To rationalise this, we here investigate by extensive computer simulations mutual interactions of rod-like particles adsorbed on the surface of responsive elastic two-dimensional sheets. Specifically, we quantify sheet deformations as a response to adhesion of such filamentous particles. We demonstrate that tip-to-tip contacts of rods are favoured for relatively soft sheets, while side-by-side contacts are preferred for stiffer elastic substrates. These attractive orientation-dependent substrate-mediated interactions between the rod-like particles on responsive sheets can drive their aggregation and self-assembly. The optimal orientation of the membrane-bound rods is established via responding to the elastic energy profiles created around the particles. We unveil the phase diagramme of attractive-repulsive rod-rod interactions in the plane of their separation and mutual orientation. Applications of our results to other systems featuring membrane-associated particles are also discussed.}, language = {en} } @misc{GhoshCherstvyPetrovetal.2016, author = {Ghosh, Surya K. and Cherstvy, Andrey G. and Petrov, Eugene P. and Metzler, Ralf}, title = {Interactions of rod-like particles on responsive elastic sheets}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-95882}, year = {2016}, abstract = {What are the physical laws of the mutual interactions of objects bound to cell membranes, such as various membrane proteins or elongated virus particles? To rationalise this, we here investigate by extensive computer simulations mutual interactions of rod-like particles adsorbed on the surface of responsive elastic two-dimensional sheets. Specifically, we quantify sheet deformations as a response to adhesion of such filamentous particles. We demonstrate that tip-to-tip contacts of rods are favoured for relatively soft sheets, while side-by-side contacts are preferred for stiffer elastic substrates. These attractive orientation-dependent substrate-mediated interactions between the rod-like particles on responsive sheets can drive their aggregation and self-assembly. The optimal orientation of the membrane-bound rods is established via responding to the elastic energy profiles created around the particles. We unveil the phase diagramme of attractive-repulsive rod-rod interactions in the plane of their separation and mutual orientation. Applications of our results to other systems featuring membrane-associated particles are also discussed.}, language = {en} } @article{GhoshCherstvyPetrovetal.2016, author = {Ghosh, Surya K. and Cherstvy, Andrey G. and Petrov, Eugene P. and Metzler, Ralf}, title = {Interactions of rod-like particles on responsive elastic sheets}, series = {Soft matter}, volume = {12}, journal = {Soft matter}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1744-683X}, doi = {10.1039/c6sm01522k}, pages = {7908 -- 7919}, year = {2016}, abstract = {What are the physical laws of the mutual interactions of objects bound to cell membranes, such as various membrane proteins or elongated virus particles? To rationalise this, we here investigate by extensive computer simulations mutual interactions of rod-like particles adsorbed on the surface of responsive elastic two-dimensional sheets. Specifically, we quantify sheet deformations as a response to adhesion of such filamentous particles. We demonstrate that tip-to-tip contacts of rods are favoured for relatively soft sheets, while side-by-side contacts are preferred for stiffer elastic substrates. These attractive orientation-dependent substrate-mediated interactions between the rod-like particles on responsive sheets can drive their aggregation and self-assembly. The optimal orientation of the membrane-bound rods is established via responding to the elastic energy profiles created around the particles. We unveil the phase diagramme of attractive-repulsive rod-rod interactions in the plane of their separation and mutual orientation. Applications of our results to other systems featuring membrane-associated particles are also discussed.}, language = {en} } @article{GimenezGarciaShenarTorrejonetal.2016, author = {Gimenez-Garcia, Ana and Shenar, Tomer and Torrejon, J. M. and Oskinova, Lida and Martinez-Nunez, S. and Hamann, Wolf-Rainer and Rodes-Roca, J. J. and Gonz{\´a}lez-Galan, A. and Alonso-Santiago, J. and Gonz{\´a}lez-Fern{\´a}ndez, C. and Bernabeu, Guillermo and Sander, Andreas Alexander Christoph}, title = {Measuring the stellar wind parameters in IGR J17544-2619 and Vela X-1 constrains the accretion physics in supergiant fast X-ray transient and classical supergiant X-ray binaries}, series = {Siberian Mathematical Journal}, volume = {591}, journal = {Siberian Mathematical Journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201527551}, pages = {25}, year = {2016}, abstract = {Aims. To close this gap, we perform a comparative analysis of the optical companion in two important systems: IGR J175442619 (SFXT) and Vela X-1 (SGXB). We analyze the spectra of each star in detail and derive their stellar and wind properties. As a next step, we compare the wind parameters, giving us an excellent chance of recognizing key differences between donor winds in SFXTs and SGXBs. Methods. We use archival infrared, optical and ultraviolet observations, and analyze them with the non-local thermodynamic equilibrium (NLTE) Potsdam Wolf-Rayet model atmosphere code. We derive the physical properties of the stars and their stellar winds, accounting for the influence of X-rays on the stellar winds. Results. We find that the stellar parameters derived from the analysis generally agree well with the spectral types of the two donors: O9I (IGR J17544-2619) and B0.5Iae (Vela X-1). The distance to the sources have been revised and also agree well with the estimations already available in the literature. In IGR J17544-2619 we are able to narrow the uncertainty to d = 3.0 +/- 0.2 kpc. From the stellar radius of the donor and its X-ray behavior, the eccentricity of IGR J17544-2619 is constrained to e < 0.25. The derived chemical abundances point to certain mixing during the lifetime of the donors. An important difference between the stellar winds of the two stars is their terminal velocities (v(infinity) = 1500 km s(-1) in IGR J17544-2619 and v(infinity) = 700 km s(-1) in Vela X-1), which have important consequences on the X-ray luminosity of these sources. Conclusions. The donors of IGR J17544-2619 and Vela X-1 have similar spectral types as well as similar parameters that physically characterize them and their spectra. In addition, the orbital parameters of the systems are similar too, with a nearly circular orbit and short orbital period. However, they show moderate differences in their stellar wind velocity and the spin period of their neutron star which has a strong impact on the X-ray luminosity of the sources. This specific combination of wind speed and pulsar spin favors an accretion regime with a persistently high luminosity in Vela X-1, while it favors an inhibiting accretion mechanism in IGR J17544-2619. Our study demonstrates that the relative wind velocity is critical in class determination for the HMXBs hosting a supergiant donor, given that it may shift the accretion mechanism from direct accretion to propeller regimes when combined with other parameters.}, language = {en} } @article{GodecMetzler2016, author = {Godec, Aljaz and Metzler, Ralf}, title = {First passage time distribution in heterogeneity controlled kinetics: going beyond the mean first passage time}, series = {Scientific reports}, volume = {6}, journal = {Scientific reports}, publisher = {Nature Publ. Group}, address = {London}, issn = {2045-2322}, doi = {10.1038/srep20349}, pages = {11}, year = {2016}, abstract = {The first passage is a generic concept for quantifying when a random quantity such as the position of a diffusing molecule or the value of a stock crosses a preset threshold (target) for the first time. The last decade saw an enlightening series of new results focusing mostly on the so-called mean and global first passage time (MFPT and GFPT, respectively) of such processes. Here we push the understanding of first passage processes one step further. For a simple heterogeneous system we derive rigorously the complete distribution of first passage times (FPTs). Our results demonstrate that the typical FPT significantly differs from the MFPT, which corresponds to the long time behaviour of the FPT distribution. Conversely, the short time behaviour is shown to correspond to trajectories connecting directly from the initial value to the target. Remarkably, we reveal a previously overlooked third characteristic time scale of the first passage dynamics mirroring brief excursion away from the target.}, language = {en} } @article{GodecMetzler2016, author = {Godec, Aljaz and Metzler, Ralf}, title = {Universal Proximity Effect in Target Search Kinetics in the Few-Encounter Limit}, series = {Physical review : X, Expanding access}, volume = {6}, journal = {Physical review : X, Expanding access}, publisher = {American Physical Society}, address = {College Park}, issn = {2160-3308}, doi = {10.1103/PhysRevX.6.041037}, pages = {11}, year = {2016}, abstract = {When does a diffusing particle reach its target for the first time? This first-passage time (FPT) problem is central to the kinetics of molecular reactions in chemistry and molecular biology. Here, we explain the behavior of smooth FPT densities, for which all moments are finite, and demonstrate universal yet generally non-Poissonian long-time asymptotics for a broad variety of transport processes. While Poisson-like asymptotics arise generically in the presence of an effective repulsion in the immediate vicinity of the target, a time-scale separation between direct and reflected indirect trajectories gives rise to a universal proximity effect: Direct paths, heading more or less straight from the point of release to the target, become typical and focused, with a narrow spread of the corresponding first-passage times. Conversely, statistically dominant indirect paths exploring the entire system tend to be massively dissimilar. The initial distance to the target particularly impacts gene regulatory or competitive stochastic processes, for which few binding events often determine the regulatory outcome. The proximity effect is independent of details of the transport, highlighting the robust character of the FPT features uncovered here.}, language = {en} } @article{GodecMetzler2016, author = {Godec, Aljaz and Metzler, Ralf}, title = {Active transport improves the precision of linear long distance molecular signalling}, series = {Journal of physics : A, Mathematical and theoretical}, volume = {49}, journal = {Journal of physics : A, Mathematical and theoretical}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1751-8113}, doi = {10.1088/1751-8113/49/36/364001}, pages = {11}, year = {2016}, abstract = {Molecular signalling in living cells occurs at low copy numbers and is thereby inherently limited by the noise imposed by thermal diffusion. The precision at which biochemical receptors can count signalling molecules is intimately related to the noise correlation time. In addition to passive thermal diffusion, messenger RNA and vesicle-engulfed signalling molecules can transiently bind to molecular motors and are actively transported across biological cells. Active transport is most beneficial when trafficking occurs over large distances, for instance up to the order of 1 metre in neurons. Here we explain how intermittent active transport allows for faster equilibration upon a change in concentration triggered by biochemical stimuli. Moreover, we show how intermittent active excursions induce qualitative changes in the noise in effectively one-dimensional systems such as dendrites. Thereby they allow for significantly improved signalling precision in the sense of a smaller relative deviation in the concentration read-out by the receptor. On the basis of linear response theory we derive the exact mean field precision limit for counting actively transported molecules. We explain how intermittent active excursions disrupt the recurrence in the molecular motion, thereby facilitating improved signalling accuracy. Our results provide a deeper understanding of how recurrence affects molecular signalling precision in biological cells and novel medical-diagnostic devices.}, language = {en} } @phdthesis{Gomez2016, author = {Gomez, David}, title = {Mechanisms of biochemical reactions within crowded environments}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-94593}, school = {Universit{\"a}t Potsdam}, pages = {vii, 112}, year = {2016}, abstract = {The cell interior is a highly packed environment in which biological macromolecules evolve and function. This crowded media has effects in many biological processes such as protein-protein binding, gene regulation, and protein folding. Thus, biochemical reactions that take place in such crowded conditions differ from diluted test tube conditions, and a considerable effort has been invested in order to understand such differences. In this work, we combine different computationally tools to disentangle the effects of molecular crowding on biochemical processes. First, we propose a lattice model to study the implications of molecular crowding on enzymatic reactions. We provide a detailed picture of how crowding affects binding and unbinding events and how the separate effects of crowding on binding equilibrium act together. Then, we implement a lattice model to study the effects of molecular crowding on facilitated diffusion. We find that obstacles on the DNA impair facilitated diffusion. However, the extent of this effect depends on how dynamic obstacles are on the DNA. For the scenario in which crowders are only present in the bulk solution, we find that at some conditions presence of crowding agents can enhance specific-DNA binding. Finally, we make use of structure-based techniques to look at the impact of the presence of crowders on the folding a protein. We find that polymeric crowders have stronger effects on protein stability than spherical crowders. The strength of this effect increases as the polymeric crowders become longer. The methods we propose here are general and can also be applied to more complicated systems.}, language = {en} } @article{GonzalezManriqueKuckeinPastorYabaretal.2016, author = {Gonzalez Manrique, Sergio Javier and Kuckein, Christoph and Pastor Yabar, A. and Collados Vera, M. and Denker, Carsten and Fischer, C. E. and G{\"o}m{\"o}ry, P. and Diercke, Andrea and Gonzalez, N. Bello and Schlichenmaier, R. and Balthasar, H. and Berkefeld, T. and Feller, A. and Hoch, S. and Hofmann, A. and Kneer, F. and Lagg, A. and Nicklas, H. and Orozco Suarez, D. and Schmidt, D. and Schmidt, W. and Sigwarth, M. and Sobotka, M. and Solanki, S. K. and Soltau, D. and Staude, J. and Strassmeier, Klaus G. and Verma, Meetu and Volkmer, R. and von der L{\"u}he, O. and Waldmann, T.}, title = {Fitting peculiar spectral profiles in He I 10830 angstrom absorption features}, series = {Astronomische Nachrichten = Astronomical notes}, volume = {337}, journal = {Astronomische Nachrichten = Astronomical notes}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {0004-6337}, doi = {10.1002/asna.201512433}, pages = {1057 -- 1063}, year = {2016}, abstract = {The new generation of solar instruments provides better spectral, spatial, and temporal resolution for a better understanding of the physical processes that take place on the Sun. Multiple-component profiles are more commonly observed with these instruments. Particularly, the He i 10830 triplet presents such peculiar spectral profiles, which give information on the velocity and magnetic fine structure of the upper chromosphere. The purpose of this investigation is to describe a technique to efficiently fit the two blended components of the He i 10830 triplet, which are commonly observed when two atmospheric components are located within the same resolution element. The observations used in this study were taken on 2015 April 17 with the very fast spectroscopic mode of the GREGOR Infrared Spectrograph (GRIS) attached to the 1.5-m GREGOR solar telescope, located at the Observatorio del Teide, Tenerife, Spain. We apply a double-Lorentzian fitting technique using Levenberg-Marquardt least-squares minimization. This technique is very simple and much faster than inversion codes. Line-of-sight Doppler velocities can be inferred for a whole map of pixels within just a few minutes. Our results show sub-and supersonic downflow velocities of up to 32 km s(-1) for the fast component in the vicinity of footpoints of filamentary structures. The slow component presents velocities close to rest. (C) 2016 WILEY-VCH Verlag GmbH\& Co. KGaA, Weinheim}, language = {en} } @misc{Goychuk2016, author = {Goychuk, Igor}, title = {Quantum ergodicity breaking in semi-classical electron transfer dynamics}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-102264}, pages = {11}, year = {2016}, abstract = {Can the statistical properties of single-electron transfer events be correctly predicted within a common equilibrium ensemble description? This fundamental in nanoworld question of ergodic behavior is scrutinized within a very basic semi-classical curve-crossing problem. It is shown that in the limit of non-adiabatic electron transfer (weak tunneling) well-described by the Marcus-Levich-Dogonadze(MLD) rate the answer is yes. However, in the limit of the so-called solvent-controlled adiabatic electron transfer, a profound breaking of ergodicity occurs. Namely, a common description based on the ensemble reduced density matrix with an initial equilibrium distribution of the reaction coordinate is not able to reproduce the statistics of single-trajectory events in this seemingly classical regime. For sufficiently large activation barriers, the ensemble survival probability in a state remains nearly exponential with the inverse rate given by the sum of the adiabatic curve crossing (Kramers) time and the inverse MLD rate. In contrast, near to the adiabatic regime, the single-electron survival probability is clearly non-exponential, even though it possesses an exponential tail which agrees well with the ensemble description. Initially, it is well described by a Mittag-Leffler distribution with a fractional rate. Paradoxically, the mean transfer time in this classical on the ensemble level regime is well described by the inverse of the nonadiabatic quantum tunneling rate on a single particle level. An analytical theory is developed which perfectly agrees with stochastic simulations and explains our findings.}, language = {en} } @misc{Goychuk2016, author = {Goychuk, Igor}, title = {Molecular machines operating on the nanoscale: from classical to quantum}, series = {Beilstein journal of nanotechnology}, volume = {7}, journal = {Beilstein journal of nanotechnology}, publisher = {Beilstein-Institut zur F{\~A}\Prderung der Chemischen Wissenschaften}, address = {Frankfurt, Main}, issn = {2190-4286}, doi = {10.3762/bjnano.7.31}, pages = {328 -- 350}, year = {2016}, abstract = {The main physical features and operating principles of isothermal nanomachines in the microworld, common to both classical and quantum machines, are reviewed. Special attention is paid to the dual, constructive role of dissipation and thermal fluctuations, the fluctuation-dissipation theorem, heat losses and free energy transduction, thermodynamic efficiency, and thermodynamic efficiency at maximum power. Several basic models are considered and discussed to highlight generic physical features. This work examines some common fallacies that continue to plague the literature. In particular, the erroneous beliefs that one should minimize friction and lower the temperature for high performance of Brownian machines, and that the thermodynamic efficiency at maximum power cannot exceed one-half are discussed. The emerging topic of anomalous molecular motors operating subdiffusively but very efficiently in the viscoelastic environment of living cells is also discussed.}, language = {en} } @article{GuberRichter2016, author = {Guber, Christoph R. and Richter, Philipp}, title = {Dust depletion of Ca and Ti in QSO absorption-line systems}, series = {Wiley Interdisciplinary Reviews : Water}, volume = {591}, journal = {Wiley Interdisciplinary Reviews : Water}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201628466}, pages = {16}, year = {2016}, abstract = {Aims. To explore the role of titanium-and calcium-dust depletion in gas in and around galaxies, we systematically study Ti/Ca abundance ratios in intervening absorption-line systems at low and high redshift. Methods. We investigate high-resolution optical spectra obtained by the UVES instrument at the Very Large Telescope (VLT) and spectroscopically analyze 34 absorption-line systems at z <= 0.5 to measure column densities (or limits) for Ca II and Ti II. We complement our UVES data set with previously published absorption-line data on Ti/Ca for redshifts up to z similar to 3.8. Our absorber sample contains 110 absorbers including damped Lyman alpha systems (DLAs), sub-DLAs, and Lyman-Limit systems (LLS). We compare our Ti/Ca findings with results from the MilkyWay and the Magellanic Clouds and discuss the properties of Ti/Ca absorbers in the general context of quasar absorption-line systems. Results. Our analysis indicates that there are two distinct populations of absorbers with either high or low Ti/Ca ratios with a separation at [Ti/Ca] approximate to 1. While the calcium-dust depletion in most of the absorbers appears to be severe, the titanium depletions are mild in systems with high Ti/Ca ratios. The derived trend indicates that absorbers with high Ti/Ca ratios have dust-to-gas ratios that are substantially lower than in the Milky Way. We characterize the overall nature of the absorbers by correlating Ti/Ca with other observables (e.g., metallicity, velocity-component structure) and by modeling the ionization properties of singly-ionized Ca and Ti in different environments. Conclusions. We conclude that Ca II and Ti II bearing absorption-line systems trace predominantly neutral gas in the disks and inner halo regions of galaxies, where the abundance of Ca and Ti reflects the local metal and dust content of the gas. Our study suggests that the Ti/Ca ratio represents a useful measure for the gas-to-dust ratio and overall metallicity in intervening absorption-line systems.}, language = {en} } @misc{Guehr2016, author = {G{\"u}hr, Markus}, title = {Ultrafast Soft X-ray Probing of Gas Phase Molecular Dynamics}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-97215}, year = {2016}, abstract = {The molecular ability to selectively and efficiently convert sunlight into other forms of energy like heat, bond change, or charge separation is truly remarkable. The decisive steps in these transformations often happen on a femtosecond timescale and require transitions among different electronic states that violate the Born-Oppenheimer approximation (BOA). Non-BOA transitions pose challenges to both theory and experiment. From a theoretical point of view, excited state dynamics and nonadiabatic transitions both are difficult problems (see Figure 1(a)). However, the theory on non-BOA dynamics has advanced significantly over the last two decades. Full dynamical simulations for molecules of the size of nucleobases have been possible for a couple of years and allow predictions of experimental observables like photoelectron energy or ion yield. The availability of these calculations for isolated molecules has spurred new experimental efforts to develop methods that are sufficiently different from all optical techniques. For determination of transient molecular structure, femtosecond X-ray diffraction and electron diffraction have been implemented on optically excited molecules.}, language = {en} } @phdthesis{Habicht2016, author = {Habicht, Klaus}, title = {Neutron-resonance spin-echo spectroscopy}, school = {Universit{\"a}t Potsdam}, pages = {276}, year = {2016}, language = {en} } @article{HahnTscheuschnerSalleretal.2016, author = {Hahn, Tobias and Tscheuschner, Steffen and Saller, Christina and Strohriegl, Peter and Boregowda, Puttaraju and Mukhopadhyay, Tushita and Patil, Satish and Neher, Dieter and B{\"a}ssler, Heinz and K{\"o}hler, Anna}, title = {Role of Intrinsic Photogeneration in Single Layer and Bilayer Solar Cells with C-60 and PCBM}, series = {The journal of physical chemistry : C, Nanomaterials and interfaces}, volume = {120}, journal = {The journal of physical chemistry : C, Nanomaterials and interfaces}, publisher = {American Chemical Society}, address = {Washington}, issn = {1932-7447}, doi = {10.1021/acs.jpcc.6b08471}, pages = {25083 -- 25091}, year = {2016}, language = {en} } @article{HamaguchiOskinovaRusselletal.2016, author = {Hamaguchi, K. and Oskinova, Lida and Russell, C. M. P. and Petre, R. and Enoto, T. and Morihana, K. and Ishida, M.}, title = {DISCOVERY OF RAPIDLY MOVING PARTIAL X-RAY ABSORBERS WITHIN GAMMA CASSIOPEIAE}, series = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, volume = {832}, journal = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {0004-637X}, doi = {10.3847/0004-637X/832/2/140}, pages = {33 -- 49}, year = {2016}, abstract = {detected six rapid X-ray spectral hardening events called "softness dips" in a similar to 100 ks observation in 2011. All the softness dip events show symmetric softness-ratio variations, and some of them have flat bottoms apparently due to saturation. The softness dip spectra are best described by either similar to 40\% or similar to 70\% partial covering absorption to kT similar to 12 keV plasma emission by matter with a neutral hydrogen column density of similar to(2-8) x 10(21) cm(-2), while the spectrum outside these dips is almost free of absorption. This result suggests the presence of two distinct X-ray-emitting spots in the.. Cas system, perhaps on a white dwarf (WD) companion with dipole mass accretion. The partial covering absorbers may be blobs in the Be stellar wind, the Be disk, or rotating around the WD companion. Weak correlations of the softness ratios to the hard X-ray flux suggest the presence of stable plasmas at kT similar to 0.9 and 5 keV, which may originate from the Be or WD winds. The formation of a Be star and WD binary system requires mass transfer between two stars; gamma Cas may have experienced such activity in the past.}, language = {en} } @article{HassaninKliemSeehafer2016, author = {Hassanin, Alshaimaa and Kliem, Bernhard and Seehafer, Norbert}, title = {Helical kink instability in the confined solar eruption on 2002 May 27}, series = {Astronomische Nachrichten = Astronomical notes}, volume = {337}, journal = {Astronomische Nachrichten = Astronomical notes}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {0004-6337}, doi = {10.1002/asna.201612446}, pages = {1082 -- 1089}, year = {2016}, language = {en} } @phdthesis{Herenz2016, author = {Herenz, Edmund Christian}, title = {Detecting and understanding extragalactic Lyman α emission using 3D spectroscopy}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-102341}, school = {Universit{\"a}t Potsdam}, pages = {175}, year = {2016}, abstract = {In this thesis we use integral-field spectroscopy to detect and understand of Lyman α (Lyα) emission from high-redshift galaxies. Intrinsically the Lyα emission at λ = 1216 {\AA} is the strongest recombination line from galaxies. It arises from the 2p → 1s transition in hydrogen. In star-forming galaxies the line is powered by ionisation of the interstellar gas by hot O- and B- stars. Galaxies with star-formation rates of 1 - 10 Msol/year are expected to have Lyα luminosities of 42 dex - 43 dex (erg/s), corresponding to fluxes ~ -17 dex - -18 dex (erg/s/cm²) at redshifts z~3, where Lyα is easily accessible with ground-based telescopes. However, star-forming galaxies do not show these expected Lyα fluxes. Primarily this is a consequence of the high-absorption cross-section of neutral hydrogen for Lyα photons σ ~ -14 dex (cm²). Therefore, in typical interstellar environments Lyα photons have to undergo a complex radiative transfer. The exact conditions under which Lyα photons can escape a galaxy are poorly understood. Here we present results from three observational projects. In Chapter 2, we show integral field spectroscopic observations of 14 nearby star-forming galaxies in Balmer α radiation (Hα, λ = 6562.8 {\AA}). These observations were obtained with the Potsdam Multi Aperture Spectrophotometer at the Calar-Alto 3.5m Telescope}. Hα directly traces the intrinsic Lyα radiation field. We present Hα velocity fields and velocity dispersion maps spatially registered onto Hubble Space Telescope Lyα and Hα images. From our observations, we conjecture a causal connection between spatially resolved Hα kinematics and Lyα photometry for individual galaxies. Statistically, we find that dispersion-dominated galaxies are more likely to emit Lyα photons than galaxies where ordered gas-motions dominate. This result indicates that turbulence in actively star-forming systems favours an escape of Lyα radiation. Not only massive stars can power Lyα radiation, but also non-thermal emission from an accreting super-massive black hole in the galaxy centre. If a galaxy harbours such an active galactic nucleus, the rate of hydrogen-ionising photons can be more than 1000 times higher than that of a typical star-forming galaxy. This radiation can potentially ionise large regions well outside the main stellar body of galaxies. Therefore, it is expected that the neutral hydrogen from these circum-galactic regions shines fluorescently in Lyα. Circum-galactic gas plays a crucial role in galaxy formation. It may act as a reservoir for fuelling star formation, and it is also subject to feedback processes that expel galactic material. If Lyα emission from this circum-galactic medium (CGM) was detected, these important processes could be studied in-situ around high-z galaxies. In Chapter 3, we show observations of five radio-quiet quasars with PMAS to search for possible extended CGM emission in the Lyα line. However, in four of the five objects, we find no significant traces of this emission. In the fifth object, there is evidence for a weak and spatially quite compact Lyα excess at several kpc outside the nucleus. The faintness of these structures is consistent with the idea that radio-quiet quasars typically reside in dark matter haloes of modest masses. While we were not able to detect Lyα CGM emission, our upper limits provide constraints for the new generation of IFS instruments at 8--10m class telescopes. The Multi Unit Spectroscopic Explorer (MUSE) at ESOs Very Large Telescopeis such an unique instrument. One of the main motivating drivers in its construction was the use as a survey instrument for Lyα emitting galaxies at high-z. Currently, we are conducting such a survey that will cover a total area of ~100 square arcminutes with 1 hour exposures for each 1 square arcminute MUSE pointing. As a first result from this survey we present in Chapter 5 a catalogue of 831 emission-line selected galaxies from a 22.2 square arcminute region in the Chandra Deep Field South. In order to construct the catalogue, we developed and implemented a novel source detection algorithm -- LSDCat -- based on matched filtering for line emission in 3D spectroscopic datasets (Chapter 4). Our catalogue contains 237 Lyα emitting galaxies in the redshift range 3 ≲ z ≲ 6. Only four of those previously had spectroscopic redshifts in the literature. We conclude this thesis with an outlook on the construction of a Lyα luminosity function based on this unique sample (Chapter 6).}, language = {en} } @article{HicPradhanRybskietal.2016, author = {Hic, Ceren and Pradhan, Prajal and Rybski, Diego and Kropp, J{\"u}rgen}, title = {Food Surplus and Its Climate Burdens}, series = {Geological Society of America bulletin}, volume = {50}, journal = {Geological Society of America bulletin}, publisher = {American Chemical Society}, address = {Washington}, issn = {0013-936X}, doi = {10.1021/acs.est.5b05088}, pages = {4269 -- 4277}, year = {2016}, abstract = {Avoiding food loss and waste may counteract the increasing food demand and reduce greenhouse gas (GHG) emissions from the agricultural sector. This is crucial because of limited options available to increase food production. In the year 2010, food availability was 20\% higher than was required on a global scale. Thus, a more sustainable food production and adjusted consumption would have positive environmental effects. This study provides a systematic approach to estimate consumer level food waste on a country scale and globally, based on food availability and requirements. The food requirement estimation considers demographic development, body weights, and physical activity levels. Surplus between food availability and requirements of a given country is considered as food waste. The global food requirement changed from 2,300 kcal/cap/day to 2,400 kcal/cap/day during the last 50 years, while food surplus grew from 310 kcal/cap/day to 510 kcal/cap/day. Similarly, GHG emissions related to the food surplus increased from 130 Mt CO2eq/yr to 530 Mt CO2eq/yr, an increase of more than 300\%. Moreover, the global food surplus may increase up to 850 kcal/cap/day, while the total food requirement will increase only by 2\%-20\% by 2050. Consequently, GHG emissions associated with the food waste may also increase tremendously to 1.9-2.5 Gt CO2eq/yr.}, language = {en} } @article{HollaenderKossackKolloscheetal.2016, author = {Holl{\"a}nder, Lars and Kossack, Wilhelm and Kollosche, Matthias and Wirges, Werner and Kremer, Friedrich and Gerhard, Reimund}, title = {Influence of the remanent polarisation on the liquid crystal alignment in composite films of ferroelectric poly(vinylidene fluoride-trifluoroethylene) and a cyanobiphenyl-based liquid crystal}, series = {Liquid crystals : an international journal of science and technology}, volume = {43}, journal = {Liquid crystals : an international journal of science and technology}, publisher = {Editions Rodopi BV}, address = {Abingdon}, issn = {0267-8292}, doi = {10.1080/02678292.2016.1185174}, pages = {1514 -- 1521}, year = {2016}, abstract = {Polymer-dispersed liquid crystals (PDLCs) of ferroelectric poly(vinylidene fluoride-trifluoroethylene) and nematic 4-cyano-4\&\#697;-n-hexylbiphenyl (6CB) or 4-cyano-4\&\#697;-n-pentylbiphenyl (5CB) were prepared to study the effect of the remanent polarisation of the polymer on the liquid crystal alignment. We measured the macroscopic alignment of the liquid crystal molecules in the thickness direction by means of Infrared Transition-Moment Orientational Analysis. Electrical poling at 100 V/µm caused an increased order parameter up to 0.15. After subsequent annealing above the nematic-to-isotropic phase-transition temperature, the order parameter was reduced to 0.02. Nevertheless, the order parameter was still higher than for non-poled film indicating a slight orientation in thickness direction. Both values are lower than those expected from model calculations. In agreement with dielectric measurements, we attribute this result to the shielding effect of mobile charge carriers within the liquid crystal inclusions.}, language = {en} } @article{HubrigKholtyginIlyinetal.2016, author = {Hubrig, Swetlana and Kholtygin, A. and Ilyin, Ilya and Sch{\"o}ller, M. and Oskinova, Lida}, title = {THE FIRST SPECTROPOLARIMETRIC MONITORING OF THE PECULIAR O4 Ief SUPERGIANT zeta PUPPIS}, series = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, volume = {822}, journal = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {0004-637X}, doi = {10.3847/0004-637X/822/2/104}, pages = {7}, year = {2016}, abstract = {The origin of the magnetic field in massive O-type stars is still under debate. To model the physical processes responsible for the generation of O star magnetic fields, it is important to understand whether correlations between the presence of a magnetic field and stellar evolutionary state, rotation velocity, kinematical status, and surface composition can be identified. The O4 Ief supergiant zeta Pup is a fast rotator and a runaway star, which may be a product of a past binary interaction, possibly having had an encounter with the cluster Trumper 10 some 2 Myr ago. The currently available observational material suggests that certain observed phenomena in this star may be related to the presence of a magnetic field. We acquired spectropolarimetric observations of zeta Pup with FORS 2 mounted on the 8 m Antu telescope of the Very Large Telescope to investigate if a magnetic field is indeed present in this star. We show that many spectral lines are highly variable and probably vary with the recently detected period of 1.78 day. No magnetic field is detected in zeta Pup, as no magnetic field measurement has a significance level higher than 2.4 sigma. Still, we studied the probability of a single sinusoidal explaining the variation of the longitudinal magnetic field measurements.}, language = {en} } @article{HubrigScholzHamannetal.2016, author = {Hubrig, Swetlana and Scholz, Kathleen and Hamann, Wolf-Rainer and Schoeller, M. and Ignace, R. and Ilyin, Ilya and Gayley, K. G. and Oskinova, Lida}, title = {Searching for a magnetic field in Wolf-Rayet stars using FORS 2 spectropolarimetry}, series = {Monthly notices of the Royal Astronomical Society}, volume = {458}, journal = {Monthly notices of the Royal Astronomical Society}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {0035-8711}, doi = {10.1093/mnras/stw558}, pages = {3381 -- 3393}, year = {2016}, abstract = {To investigate if magnetic fields are present in Wolf-Rayet stars, we selected a few stars in the Galaxy and one in the Large Magellanic Cloud (LMC). We acquired low-resolution spectropolarimetric observations with the European Southern Observatory FORS 2 (FOcal Reducer low dispersion Spectrograph) instrument during two different observing runs. During the first run in visitor mode, we observed the LMC Wolf-Rayet star BAT99 7 and the stars WR 6, WR 7, WR 18, and WR 23 in our Galaxy. The second run in service mode was focused on monitoring the star WR 6. Linear polarization was recorded immediately after the observations of circular polarization. During our visitor observing run, the magnetic field for the cyclically variable star WR 6 was measured at a significance level of 3.3 sigma (< B-z > = 258 +/- 78 G). Among the other targets, the highest value for the longitudinal magnetic field, < B-z > = 327 +/- 141 G, was measured in the LMC star BAT99 7. Spectropolarimetric monitoring of the star WR 6 revealed a sinusoidal nature of the < B-z > variations with the known rotation period of 3.77 d, significantly adding to the confidence in the detection. The presence of the rotation-modulated magnetic variability is also indicated in our frequency periodogram. The reported field magnitude suffers from significant systematic uncertainties at the factor of 2 level, in addition to the quoted statistical uncertainties, owing to the theoretical approach used to characterize it. Linear polarization measurements showed no line effect in the stars, apart from WR 6. BAT99 7, WR 7, and WR 23 do not show variability of the linear polarization over two nights.}, language = {en} } @article{HusserKamannDreizleretal.2016, author = {Husser, Tim-Oliver and Kamann, Sebastian and Dreizler, Stefan and Wendt, Martin and Wulff, Nina and Bacon, Roland and Wisotzki, Lutz and Brinchmann, Jarle and Weilbacher, Peter Michael and Roth, Martin M. and Monreal-Ibero, Ana}, title = {MUSE crowded field 3D spectroscopy of over 12 000 stars in the globular cluster NGC 6397 I. The first comprehensive HRD of a globular cluster}, series = {Nucleic acids research}, volume = {588}, journal = {Nucleic acids research}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201526949}, pages = {14}, year = {2016}, abstract = {Aims. We demonstrate the high multiplex advantage of crowded field 3D spectroscopy with the new integral field spectrograph MUSE by means of a spectroscopic analysis of more than 12 000 individual stars in the globular cluster NGC 6397. Methods. The stars are deblended with a point spread function fitting technique, using a photometric reference catalogue from HST as prior, including relative positions and brightnesses. This catalogue is also used for a first analysis of the extracted spectra, followed by an automatic in-depth analysis via a full-spectrum fitting method based on a large grid of PHOENIX spectra. Results. We analysed the largest sample so far available for a single globular cluster of 18 932 spectra from 12 307 stars in NGC 6397. We derived a mean radial velocity of v(rad) = 17.84 +/- 0.07 km s(-1) and a mean metallicity of [Fe/H] = -2.120 +/- 0.002, with the latter seemingly varying with temperature for stars on the red giant branch (RGB). We determine Teff and [Fe/H] from the spectra, and log g from HST photometry. This is the first very comprehensive Hertzsprung-Russell diagram (HRD) for a globular cluster based on the analysis of several thousands of stellar spectra, ranging from the main sequence to the tip of the RGB. Furthermore, two interesting objects were identified; one is a post-AGB star and the other is a possible millisecond-pulsar companion.}, language = {en} } @article{IntravaiaBehuninHenkeletal.2016, author = {Intravaia, F. and Behunin, R. O. and Henkel, Carsten and Busch, K. and Dalvit, D. A. R.}, title = {Failure of Local Thermal Equilibrium in Quantum Friction}, series = {Physical review letters}, volume = {117}, journal = {Physical review letters}, publisher = {American Physical Society}, address = {College Park}, issn = {0031-9007}, doi = {10.1103/PhysRevLett.117.100402}, pages = {989 -- 1010}, year = {2016}, abstract = {Recent progress in manipulating atomic and condensed matter systems has instigated a surge of interest in nonequilibrium physics, including many-body dynamics of trapped ultracold atoms and ions, near-field radiative heat transfer, and quantum friction. Under most circumstances the complexity of such nonequilibrium systems requires a number of approximations to make theoretical descriptions tractable. In particular, it is often assumed that spatially separated components of a system thermalize with their immediate surroundings, although the global state of the system is out of equilibrium. This powerful assumption reduces the complexity of nonequilibrium systems to the local application of well-founded equilibrium concepts. While this technique appears to be consistent for the description of some phenomena, we show that it fails for quantum friction by underestimating by approximately 80\% the magnitude of the drag force. Our results show that the correlations among the components of driven, but steady-state, quantum systems invalidate the assumption of local thermal equilibrium, calling for a critical reexamination of this approach for describing the physics of nonequilibrium systems.}, language = {en} } @article{IntravaiaBehuninHenkeletal.2016, author = {Intravaia, F. and Behunin, R. O. and Henkel, Carsten and Busch, K. and Dalvit, D. A. R.}, title = {Non-Markovianity in atom-surface dispersion forces}, series = {Physical review : A, Atomic, molecular, and optical physics}, volume = {94}, journal = {Physical review : A, Atomic, molecular, and optical physics}, publisher = {American Physical Society}, address = {College Park}, issn = {2469-9926}, doi = {10.1103/PhysRevA.94.042114}, pages = {16}, year = {2016}, abstract = {We discuss the failure of the Markov approximation in the description of atom-surface fluctuation-induced interactions, both in equilibrium (Casimir-Polder forces) and out of equilibrium (quantum friction). Using general theoretical arguments, we show that the Markov approximation can lead to erroneous predictions of such phenomena with regard to both strength and functional dependencies on system parameters. In particular, we show that the long-time power-law tails of two-time dipole correlations and their corresponding low-frequency behavior, neglected in the Markovian limit, affect the prediction of the force. Our findings highlight the importance of non-Markovian effects in dispersion interactions.}, language = {en} } @article{IurchukSchickBranetal.2016, author = {Iurchuk, V. and Schick, D. and Bran, J. and Colson, D. and Forget, A. and Halley, D. and Koc, Azize and Reinhardt, Mathias and Kwamen, C. and Morley, N. A. and Bargheer, Matias and Viret, M. and Gumeniuk, R. and Schmerber, G. and Doudin, B. and Kundys, B.}, title = {Optical Writing of Magnetic Properties by Remanent Photostriction}, series = {Physical review letters}, volume = {117}, journal = {Physical review letters}, publisher = {American Physical Society}, address = {College Park}, issn = {0031-9007}, doi = {10.1103/PhysRevLett.117.107403}, pages = {5}, year = {2016}, abstract = {We present an optically induced remanent photostriction in BiFeO3, resulting from the photovoltaic effect, which is used to modify the ferromagnetism of Ni film in a hybrid BiFeO3/Ni structure. The 75\% change in coercivity in the Ni film is achieved via optical and nonvolatile control. This photoferromagnetic effect can be reversed by static or ac electric depolarization of BiFeO3. Hence, the strain dependent changes in magnetic properties are written optically, and erased electrically. Light-mediated straintronics is therefore a possible approach for low-power multistate control of magnetic elements relevant for memory and spintronic applications.}, language = {en} } @article{IvanovCioniBekkietal.2016, author = {Ivanov, Valentin D. and Cioni, Maria-Rosa L. and Bekki, Kenji and de Grijs, Richard and Emerson, Jim and Gibson, Brad K. and Kamath, Devika and van Loon, Jacco Th. and Piatti, Andres E. and For, Bi-Qing}, title = {New quasars behind the Magellanic Clouds. Spectroscopic confirmation of near-infrared selected candidates}, series = {Current biology}, volume = {588}, journal = {Current biology}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201527398}, pages = {12}, year = {2016}, abstract = {Context. Quasi-stellar objects (quasars) located behind nearby galaxies provide an excellent absolute reference system for astrometric studies, but they are difficult to identify because of fore-and background contamination. Deep wide-field, high angular resolution surveys spanning the entire area of nearby galaxies are needed to obtain a complete census of such quasars. Aims. We embarked on a program to expand the quasar reference system behind the Large and the Small Magellanic Clouds, the Magellanic Bridge, and the Magellanic Stream that connects the Clouds with the Milky Way. Methods. Hundreds of quasar candidates were selected based on their near-infrared colors and variability properties from the ongoing public ESO VISTA Magellanic Clouds survey. A subset of 49 objects was followed up with optical spectroscopy. Results. We confirmed the quasar nature of 37 objects (34 new identifications): four are low redshift objects, three are probably stars, and the remaining three lack prominent spectral features for a secure classification. The bona fide quasars, identified from their broad emisison lines, are located as follows: 10 behind the LMC, 13 behind the SMC, and 14 behind the Bridge. The quasars span a redshift range from z similar to 0.5 to z similar to 4.1. Conclusions. Upon completion the VMC survey is expected to yield a total of similar to 1500 quasars with Y < 19.32 mag, J < 19.09 mag, and K-s < 18.04 mag.}, language = {en} } @article{JaphaZhouKeiletal.2016, author = {Japha, Yonathan and Zhou, Shuyu and Keil, Mark and Folman, Ron and Henkel, Carsten and Vardi, Amichay}, title = {Suppression and enhancement of decoherence in an atomic Josephson junction}, series = {NEW JOURNAL OF PHYSICS}, volume = {18}, journal = {NEW JOURNAL OF PHYSICS}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1367-2630}, doi = {10.1088/1367-2630/18/5/055008}, pages = {22}, year = {2016}, abstract = {We investigate the role of interatomic interactions when a Bose gas, in a double-well potential with a finite tunneling probability (a 'Bose-Josephson junction'), is exposed to external noise. We examine the rate of decoherence of a system initially in its ground state with equal probability amplitudes in both sites. The noise may induce two kinds of effects: firstly, random shifts in the relative phase or number difference between the two wells and secondly, loss of atoms from the trap. The effects of induced phase fluctuations are mitigated by atom-atom interactions and tunneling, such that the dephasing rate may be suppressed by half its single-atom value. Random fluctuations may also be induced in the population difference between the wells, in which case atom-atom interactions considerably enhance the decoherence rate. A similar scenario is predicted for the case of atom loss, even if the loss rates from the two sites are equal. We find that if the initial state is number-squeezed due to interactions, then the loss process induces population fluctuations that reduce the coherence across the junction. We examine the parameters relevant for these effects in a typical atom chip device, using a simple model of the trapping potential, experimental data, and the theory of magnetic field fluctuations near metallic conductors. These results provide a framework for mapping the dynamical range of barriers engineered for specific applications and set the stage for more complex atom circuits ('atomtronics').}, language = {en} } @article{JeonJavanainenMartinezSearaetal.2016, author = {Jeon, Jae-Hyung and Javanainen, Matti and Martinez-Seara, Hector and Metzler, Ralf and Vattulainen, Ilpo}, title = {Protein Crowding in Lipid Bilayers Gives Rise to Non-Gaussian Anomalous Lateral Diffusion of Phospholipids and Proteins}, series = {Physical review : X, Expanding access}, volume = {6}, journal = {Physical review : X, Expanding access}, publisher = {American Physical Society}, address = {College Park}, issn = {2160-3308}, doi = {10.1103/PhysRevX.6.021006}, pages = {17}, year = {2016}, abstract = {Biomembranes are exceptionally crowded with proteins with typical protein-to-lipid ratios being around 1:50 - 1:100. Protein crowding has a decisive role in lateral membrane dynamics as shown by recent experimental and computational studies that have reported anomalous lateral diffusion of phospholipids and membrane proteins in crowded lipid membranes. Based on extensive simulations and stochastic modeling of the simulated trajectories, we here investigate in detail how increasing crowding by membrane proteins reshapes the stochastic characteristics of the anomalous lateral diffusion in lipid membranes. We observe that correlated Gaussian processes of the fractional Langevin equation type, identified as the stochastic mechanism behind lipid motion in noncrowded bilayer, no longer adequately describe the lipid and protein motion in crowded but otherwise identical membranes. It turns out that protein crowding gives rise to a multifractal, non-Gaussian, and spatiotemporally heterogeneous anomalous lateral diffusion on time scales from nanoseconds to, at least, tens of microseconds. Our investigation strongly suggests that the macromolecular complexity and spatiotemporal membrane heterogeneity in cellular membranes play critical roles in determining the stochastic nature of the lateral diffusion and, consequently, the associated dynamic phenomena within membranes. Clarifying the exact stochastic mechanism for various kinds of biological membranes is an important step towards a quantitative understanding of numerous intramembrane dynamic phenomena.}, language = {en} } @article{KamannHusserBrinchmannetal.2016, author = {Kamann, S. and Husser, T. -O. and Brinchmann, Jarle and Emsellem, E. and Weilbacher, Peter Michael and Wisotzki, Lutz and Wendt, Martin and Krajnovic, D. and Roth, M. M. and Bacon, Roland and Dreizler, S.}, title = {MUSE crowded field 3D spectroscopy of over 12 000 stars in the globular cluster NGC 6397}, series = {Tectonophysics : international journal of geotectonics and the geology and physics of the interior of the earth}, volume = {588}, journal = {Tectonophysics : international journal of geotectonics and the geology and physics of the interior of the earth}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201527065}, pages = {12}, year = {2016}, abstract = {We present a detailed analysis of the kinematics of the Galactic globular cluster NGC 6397 based on more than similar to 18 000 spectra obtained with the novel integral field spectrograph MUSE. While NGC 6397 is often considered a core collapse cluster, our analysis suggests a flattening of the surface brightness profile at the smallest radii. Although it is among the nearest globular clusters, the low velocity dispersion of NGC 6397 of < 5 km s(-1) imposes heavy demands on the quality of the kinematical data. We show that despite its limited spectral resolution, MUSE reaches an accuracy of 1 km s(-1) in the analysis of stellar spectra. We find slight evidence for a rotational component in the cluster and the velocity dispersion profile that we obtain shows a mild central cusp. To investigate the nature of this feature, we calculate spherical Jeans models and compare these models to our kinematical data. This comparison shows that if a constant mass-to-light ratio is assumed, the addition of an intermediate-mass black hole with a mass of 600 M-circle dot brings the model predictions into agreement with our data, and therefore could be at the origin of the velocity dispersion profile. We further investigate cases with varying mass-to-light ratios and find that a compact dark stellar component can also explain our observations. However, such a component would closely resemble the black hole from the constant mass-to-light ratio models as this component must be confined to the central similar to 5 ' of the cluster and must have a similar mass. Independent constraints on the distribution of stellar remnants in the cluster or kinematic measurements at the highest possible spatial resolution should be able to distinguish the two alternatives.}, language = {en} } @article{KappelArnoldHaus2016, author = {Kappel, David and Arnold, Gabriele and Haus, Rainer}, title = {Multi-spectrum retrieval of Venus IR surface emissivity maps from VIRTIS/VEX nightside measurements at Themis Regio}, series = {Icarus : international journal of solar system studies}, volume = {265}, journal = {Icarus : international journal of solar system studies}, publisher = {Elsevier}, address = {San Diego}, issn = {0019-1035}, doi = {10.1016/j.icarus.2015.10.014}, pages = {42 -- 62}, year = {2016}, abstract = {Renormalized emissivity maps of Themis Regio at the three surface windows are determined from 64 measurement repetitions. Retrieval errors are estimated by a statistical evaluation of maps derived from various disjoint selections of spectra and using different assumptions on the interfering parameters. Double standard deviation errors for the three surface windows amount to 3\%, 8\%, and 4\%, respectively, allowing geologic interpretation. A comparison to results from an earlier error analysis based on synthetic spectra shows that unconsidered time variations of interfering atmospheric parameters are a major error source. Spatial variations of the 1.02 mu m surface emissivity of 20\% that correspond to the difference between unweathered granitic and basaltic rocks would be easily detectable, but such variations are ruled out for the studied target area. Emissivity anomalies of up to 8\% are detected at both 1.02 and 1.18 mu m. At present sensitivity, no anomalies are identified at 1.10 mu m, but anomalies exceeding the determined error level can be excluded. With single standard deviation significance, all three maps show interesting spatial emissivity variations. (C) 2015 Elsevier Inc. All rights reserved.}, language = {en} } @article{KegelesOriti2016, author = {Kegeles, Alexander and Oriti, Daniele}, title = {Generalized conservation laws in non-local field theories}, series = {Journal of physics : A, Mathematical and theoretical}, volume = {49}, journal = {Journal of physics : A, Mathematical and theoretical}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1751-8113}, doi = {10.1088/1751-8113/49/13/135401}, pages = {119 -- 134}, year = {2016}, abstract = {We propose a geometrical treatment of symmetries in non-local field theories, where the non-locality is due to a lack of identification of field arguments in the action. We show that the existence of a symmetry of the action leads to a generalized conservation law, in which the usual conserved current acquires an additional non-local correction term, obtaining a generalization of the standard Noether theorem. We illustrate the general formalism by discussing the specific physical example of complex scalar field theory of the type describing the hydrodynamic approximation of Bose-Einstein condensates. We expect our analysis and results to be of particular interest for the group field theory formulation of quantum gravity.}, language = {en} } @article{KimShpritsBlake2016, author = {Kim, Kyung-Chan and Shprits, Yuri Y. and Blake, J. Bernard}, title = {Fast injection of the relativistic electrons into the inner zone and the formation of the split-zone structure during the Bastille Day storm in July 2000}, series = {Journal of geophysical research : Space physics}, volume = {121}, journal = {Journal of geophysical research : Space physics}, publisher = {American Geophysical Union}, address = {Washington}, issn = {2169-9380}, doi = {10.1002/2015JA022072}, pages = {8329 -- 8342}, year = {2016}, abstract = {During the July 2000 geomagnetic storm, known as the Bastille Day storm, Solar, Anomalous, and Magnetospheric Particle Explorer (SAMPEX)/Heavy Ion Large Telescope (HILT) observed a strong injection of similar to 1MeV electrons into the slot region (L similar to 2.5) during the storm main phase. Then, during the following month, electrons were clearly seen diffusing inward down to L=2 and forming a pronounced split structure encompassing a narrow, newly formed slot region around L=3. SAMPEX observations are first compared with electron and proton observations on HEO-3 and NOAA-15 to validate that the observed unusual dynamics was not caused by proton contamination of the SAMPEX instrument. The time-dependent 3-D Versatile Electron Radiation Belt (VERB) simulation of 1MeV electron flux evolution is compared with the SAMPEX/HILT observations. The results show that the VERB code predicts overall time evolution of the observed split structure. The simulated split structure is produced by pitch angle scattering into the Earth atmosphere of similar to 1MeV electrons by plasmaspheric hiss.}, language = {en} } @article{KomarovBazhenov2016, author = {Komarov, Maxim and Bazhenov, Maxim}, title = {Linking dynamics of the inhibitory network to the input structure}, series = {Journal of computational neuroscience}, volume = {41}, journal = {Journal of computational neuroscience}, publisher = {Springer}, address = {Dordrecht}, issn = {0929-5313}, doi = {10.1007/s10827-016-0622-8}, pages = {367 -- 391}, year = {2016}, language = {en} } @article{KopyshevGalvinGenzeretal.2016, author = {Kopyshev, Alexey and Galvin, Casey J. and Genzer, Jan and Lomadze, Nino and Santer, Svetlana}, title = {Polymer brushes modified by photosensitive azobenzene containing polyamines}, series = {Polymer : the international journal for the science and technology of polymers}, volume = {98}, journal = {Polymer : the international journal for the science and technology of polymers}, publisher = {Elsevier}, address = {Oxford}, issn = {0032-3861}, doi = {10.1016/j.polymer.2016.03.050}, pages = {421 -- 428}, year = {2016}, abstract = {This paper describes a strategy for preparing photosensitive polymeric grafts on flat solid surfaces by loading diblock-copolymer or homopolymer brushes with cationic azobenzene-containing surfactants. In contrast to previous work, we utilize photosensitive surfactants that bear positively-charged polyamine head groups whose charge varies between 1(+) and 3(+). Poly(methylmethacrylate-b-methacrylic acid) (PMMA-b-PMAA) brushes were prepared by employing atom transfer radical polymerization, where the bottom poly(methyl methacrylate) block was grown first followed by the synthesis of t-butyl methacrylate block that after de-protection yielded poly(methacrylic acid). We used PMMA-b-PMAA brushes with constant grafting density and length of the PMMA block, and three different lengths of the PMAA block. The azobenzene-based surfactants attached only to the PMAA block. The degree of binding (i.e., the number of surfactant molecules per binding site on the brush backbone) of the surfactants to the brush depends strongly on the valence of the surfactant head-group; within the brushes the concentration of the surfactant carrying unit charge is larger than that of multivalent surfactants. We detect pronounced response of the brush topography on irradiation with UV interference pattern even at very low degree of binding (as small as 0.08) of multi-valence surfactant. Areas on the sample that receive the highest UV dose exhibit chain scission. By removing the ruptured chains from the substrate via good solvent, one uncovers a surface topographical relief grating, whose spatial arrangement follows the intensity distribution of the UV light on the sample during irradiation. Due to strong coupling of the multi-valence surfactants to the polymer brush, it was possible in some cases to completely remove the polyelectrolyte block from the PMMA layer. The application of multi-valence azobenzene surfactants for triggering brush photosensitive has important advantage over usage of surfactant with unit charge because relative to single-valence surfactants much lower concentrations of the multivalent surfactant are needed to achieve comparable response upon UV irradiation. (C) 2016 Elsevier Ltd. All rights reserved.}, language = {en} } @article{KopyshevGalvinPatiletal.2016, author = {Kopyshev, Alexey and Galvin, Casey J. and Patil, Rohan R. and Genzer, Jan and Lomadze, Nino and Feldmann, David and Zakrevski, Juri and Santer, Svetlana}, title = {Light-Induced Reversible Change of Roughness and Thickness of Photosensitive Polymer Brushes}, series = {Applied physics : A, Materials science \& processing}, volume = {8}, journal = {Applied physics : A, Materials science \& processing}, publisher = {American Chemical Society}, address = {Washington}, issn = {1944-8244}, doi = {10.1021/acsami.6b06881}, pages = {19175 -- 19184}, year = {2016}, abstract = {We investigate light-induced changes in thickness and roughness of photosensitive polymer brushes containing azobenzene cationic surfactants by atomic force microscopy (AFM) in real time during light irradiation. Because the cis-state of azobenzene unit requires more free volume than its trans counterpart, the UV light-induced expansion of polymer thin films associated with the trans-to-cis isomerism of azobenzene groups is expected to occur. This phenomenon is well documented in physisorbed polymer films containing azobenzene groups. In contrast, photosensitive polymer brushes show a decrease in thickness under UV irradiation. We have found that the azobenzene surfactants in their trans-state form aggregates within the brush. Under irradiation, the surfactants undergo photoisomerization to the cis-state, which is more hydrophilic. As a consequence, the aggregates within the brush are disrupted, and the polymer brush contracts. When subsequently irradiated with blue light the polymer brush thickness returns back to its initial value. This behavior is related to isomerization of the surfactant to the more hydrophobic trans-state and subsequent formation of surfactant aggregates within the polymer brush. The photomechanical function of the dry polymer brush, i.e., contraction and expansion, was found to be reversible with repeated irradiation cycles and requires only a few seconds for switching. In addition to the thickness change, the roughness of the brush also changes reversibly between a few Angstroms (blue light) and several nanometers (UV light). Photosensitive polymer brushes represent smart films with light responsive thickness and roughness that could be used for generating dynamic fluctuating surfaces, the function of which can be turned on and off in a controllable manner on a nanometer length scale.}, language = {en} } @article{KretschmerCoumouDongesetal.2016, author = {Kretschmer, Marlene and Coumou, Dim and Donges, Jonathan and Runge, Jakob}, title = {Using Causal Effect Networks to Analyze Different Arctic Drivers of Midlatitude Winter Circulation}, series = {Journal of climate}, volume = {29}, journal = {Journal of climate}, publisher = {American Meteorological Soc.}, address = {Boston}, issn = {0894-8755}, doi = {10.1175/JCLI-D-15-0654.1}, pages = {4069 -- 4081}, year = {2016}, abstract = {In recent years, the Northern Hemisphere midlatitudes have suffered from severe winters like the extreme 2012/13 winter in the eastern United States. These cold spells were linked to a meandering upper-tropospheric jet stream pattern and a negative Arctic Oscillation index (AO). However, the nature of the drivers behind these circulation patterns remains controversial. Various studies have proposed different mechanisms related to changes in the Arctic, most of them related to a reduction in sea ice concentrations or increasing Eurasian snow cover. Here, a novel type of time series analysis, called causal effect networks (CEN), based on graphical models is introduced to assess causal relationships and their time delays between different processes. The effect of different Arctic actors on winter circulation on weekly to monthly time scales is studied, and robust network patterns are found. Barents and Kara sea ice concentrations are detected to be important external drivers of the midlatitude circulation, influencing winter AO via tropospheric mechanisms and through processes involving the stratosphere. Eurasia snow cover is also detected to have a causal effect on sea level pressure in Asia, but its exact role on AO remains unclear. The CEN approach presented in this study overcomes some difficulties in interpreting correlation analyses, complements model experiments for testing hypotheses involving teleconnections, and can be used to assess their validity. The findings confirm that sea ice concentrations in autumn in the Barents and Kara Seas are an important driver of winter circulation in the midlatitudes.}, language = {en} } @article{KrollKernKubinetal.2016, author = {Kroll, Thomas and Kern, Jan and Kubin, Markus and Ratner, Daniel and Gul, Sheraz and Fuller, Franklin D. and L{\"o}chel, Heike and Krzywinski, Jacek and Lutman, Alberto and Ding, Yuantao and Dakovski, Georgi L. and Moeller, Stefan and Turner, Joshua J. and Alonso-Mori, Roberto and Nordlund, Dennis L. and Rehanek, Jens and Weniger, Christian and Firsov, Alexander and Brzhezinskaya, Maria and Chatterjee, Ruchira and Lassalle-Kaiser, Benedikt and Sierra, Raymond G. and Laksmono, Hartawan and Hill, Ethan and Borovik, Andrew S. and Erko, Alexei and F{\"o}hlisch, Alexander and Mitzner, Rolf and Yachandra, Vittal K. and Yano, Junko and Wernet, Philippe and Bergmann, Uwe}, title = {X-ray absorption spectroscopy using a self-seeded soft X-ray free-electron laser}, series = {Optics express : the international electronic journal of optics}, volume = {24}, journal = {Optics express : the international electronic journal of optics}, publisher = {Optical Society of America}, address = {Washington}, issn = {1094-4087}, doi = {10.1364/OE.24.022469}, pages = {22469 -- 22480}, year = {2016}, abstract = {X-ray free electron lasers (XFELs) enable unprecedented new ways to study the electronic structure and dynamics of transition metal systems. L-edge absorption spectroscopy is a powerful technique for such studies and the feasibility of this method at XFELs for solutions and solids has been demonstrated. However, the required x-ray bandwidth is an order of magnitude narrower than that of self-amplified spontaneous emission (SASE), and additional monochromatization is needed. Here we compare L-edge x-ray absorption spectroscopy (XAS) of a prototypical transition metal system based on monochromatizing the SASE radiation of the linac coherent light source (LCLS) with a new technique based on self-seeding of LCLS. We demonstrate how L-edge XAS can be performed using the self-seeding scheme without the need of an additional beam line monochromator. We show how the spectral shape and pulse energy depend on the undulator setup and how this affects the x-ray spectroscopy measurements. (C) 2016 Optical Society of America}, language = {en} } @article{KronbergRashevDalyetal.2016, author = {Kronberg, Elena A. and Rashev, M. V. and Daly, P. W. and Shprits, Yuri Y. and Turner, D. L. and Drozdov, Alexander and Dobynde, M. and Kellerman, Adam C. and Fritz, T. A. and Pierrard, V. and Borremans, K. and Klecker, B. and Friedel, R.}, title = {Contamination in electron observations of the silicon detector on board}, series = {Space Weather: The International Journal of Research and Applications}, volume = {14}, journal = {Space Weather: The International Journal of Research and Applications}, publisher = {American Geophysical Union}, address = {Washington}, issn = {1542-7390}, doi = {10.1002/2016SW001369}, pages = {449 -- 462}, year = {2016}, abstract = {Since more than 15 years, the Cluster mission passes through Earth's radiation belts at least once every 2 days for several hours, measuring the electron intensity at energies from 30 to 400 keV. These data have previously been considered not usable due to contamination caused by penetrating energetic particles (protons at >100 keV and electrons at >400 keV). In this study, we assess the level of distortion of energetic electron spectra from the Research with Adaptive Particle Imaging Detector (RAPID)/Imaging Electron Spectrometer (IES) detector, determining the efficiency of its shielding. We base our assessment on the analysis of experimental data and a radiation transport code (Geant4). In simulations, we use the incident particle energy distribution of the AE9/AP9 radiation belt models. We identify the Roederer L values, L\&\#8902;, and energy channels that should be used with caution: at 3\&\#8804;L\&\#8902;\&\#8804;4, all energy channels (40-400 keV) are contaminated by protons (\&\#8771;230 to 630 keV and >600 MeV); at L\&\#8902;\&\#8771;1 and 4-6, the energy channels at 95-400 keV are contaminated by high-energy electrons (>400 keV). Comparison of the data with electron and proton observations from RBSP/MagEIS indicates that the subtraction of proton fluxes at energies \&\#8771; 230-630 keV from the IES electron data adequately removes the proton contamination. We demonstrate the usefulness of the corrected data for scientific applications.}, language = {en} }