@misc{ZurellElithSchroederEsselbach2012, author = {Zurell, Damaris and Elith, Jane and Schr{\"o}der-Esselbach, Boris}, title = {Predicting to new environments tools for visualizing model behaviour and impacts on mapped distributions}, series = {Diversity \& distributions : a journal of biological invasions and biodiversity}, volume = {18}, journal = {Diversity \& distributions : a journal of biological invasions and biodiversity}, number = {6}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {1366-9516}, doi = {10.1111/j.1472-4642.2012.00887.x}, pages = {628 -- 634}, year = {2012}, abstract = {Data limitations can lead to unrealistic fits of predictive species distribution models (SDMs) and spurious extrapolation to novel environments. Here, we want to draw attention to novel combinations of environmental predictors that are within the sampled range of individual predictors but are nevertheless outside the sample space. These tend to be overlooked when visualizing model behaviour. They may be a cause of differing model transferability and environmental change predictions between methods, a problem described in some studies but generally not well understood. We here use a simple simulated data example to illustrate the problem and provide new and complementary visualization techniques to explore model behaviour and predictions to novel environments. We then apply these in a more complex real-world example. Our results underscore the necessity of scrutinizing model fits, ecological theory and environmental novelty.}, language = {en} } @misc{ZhangLenhard2017, author = {Zhang, Yunming and Lenhard, Michael}, title = {Exiting Already? Molecular Control of Cell-Proliferation Arrest in Leaves: Cutting Edge}, series = {Molecular plant}, volume = {10}, journal = {Molecular plant}, publisher = {Cell Press}, address = {Cambridge}, issn = {1674-2052}, doi = {10.1016/j.molp.2017.05.004}, pages = {909 -- 911}, year = {2017}, language = {en} } @misc{XiangHofreiterZhao2015, author = {Xiang, Hai and Hofreiter, Michael and Zhao, Xingbo}, title = {Reply to Peng et al.: Archaeological contexts should not be ignored for early chicken domestication}, series = {Proceedings of the National Academy of Sciences of the United States of America}, volume = {112}, journal = {Proceedings of the National Academy of Sciences of the United States of America}, number = {16}, publisher = {National Acad. of Sciences}, address = {Washington}, issn = {0027-8424}, doi = {10.1073/pnas.1502207112}, pages = {E1972 -- E1973}, year = {2015}, language = {en} } @misc{XiangGaoYuetal.2015, author = {Xiang, Hai and Gao, Jianqiang and Yu, Baoquan and Hofreiter, Michael and Zhao, Xingbo}, title = {Reply to Peters et al.: Further discussions confirm early Holocene chicken domestication in northern China}, series = {Proceedings of the National Academy of Sciences of the United States of America}, volume = {112}, journal = {Proceedings of the National Academy of Sciences of the United States of America}, number = {19}, publisher = {National Acad. of Sciences}, address = {Washington}, issn = {0027-8424}, doi = {10.1073/pnas.1503956112}, pages = {E2416 -- E2416}, year = {2015}, language = {en} } @misc{XenikoudakisAhmedHarrisetal.2020, author = {Xenikoudakis, Georgios and Ahmed, Mayeesha and Harris, Jacob Colt and Wadleigh, Rachel and Paijmans, Johanna L. A. and Hartmann, Stefanie and Barlow, Axel and Lerner, Heather and Hofreiter, Michael}, title = {Ancient DNA reveals twenty million years of aquatic life in beavers}, series = {Current biology : CB}, volume = {30}, journal = {Current biology : CB}, number = {3}, publisher = {Current Biology Ltd.}, address = {London}, issn = {0960-9822}, doi = {10.1016/j.cub.2019.12.041}, pages = {R110 -- R111}, year = {2020}, abstract = {Xenikoudakis et al. report a partial mitochondrial genome of the extinct giant beaver Castoroides and estimate the origin of aquatic behavior in beavers to approximately 20 million years. This time estimate coincides with the extinction of terrestrial beavers and raises the question whether the two events had a common cause.}, language = {en} } @misc{WutkeAnderssonBeneckeetal.2016, author = {Wutke, Saskia and Andersson, Leif and Benecke, Norbert and Sandoval-Castellanos, Edson and Gonzalez, Javier and Hallsson, Jon Hallsteinn and Lougas, Lembi and Magnell, Ola and Morales-Muniz, Arturo and Orlando, Ludovic and Palsdottir, Albina Hulda and Reissmann, Monika and Munoz-Rodriguez, Mariana B. and Ruttkay, Matej and Trinks, Alexandra and Hofreiter, Michael and Ludwig, Arne}, title = {The origin of ambling horses}, series = {Current biology}, volume = {26}, journal = {Current biology}, publisher = {Cell Press}, address = {Cambridge}, issn = {0960-9822}, doi = {10.1016/j.cub.2016.07.001}, pages = {R697 -- R699}, year = {2016}, abstract = {Horseback riding is the most fundamental use of domestic horses and has had a huge influence on the development of human societies for millennia. Over time, riding techniques and the style of riding improved. Therefore, horses with the ability to perform comfortable gaits (e.g. ambling or pacing), so-called 'gaited' horses, have been highly valued by humans, especially for long distance travel. Recently, the causative mutation for gaitedness in horses has been linked to a substitution causing a premature stop codon in the DMRT3 gene (DMRT3_Ser301STOP) [1]. In mice, Dmrt3 is expressed in spinal cord interneurons and plays an important role in the development of limb movement coordination [1]. Genotyping the position in 4396 modern horses from 141 breeds revealed that nowadays the mutated allele is distributed worldwide with an especially high frequency in gaited horses and breeds used for harness racing [2]. Here, we examine historic horse remains for the DMRT3 SNP, tracking the origin of gaitedness to Medieval England between 850 and 900 AD. The presence of the corresponding allele in Icelandic horses (9th-11th century) strongly suggests that ambling horses were brought from the British Isles to Iceland by Norse people. Considering the high frequency of the ambling allele in early Icelandic horses, we believe that Norse settlers selected for this comfortable mode of horse riding soon after arrival. The absence of the allele in samples from continental Europe (including Scandinavia) at this time implies that ambling horses may have spread from Iceland and maybe also the British Isles across the continent at a later date.}, language = {en} } @misc{WiegmannRutschmannWillemsen2018, author = {Wiegmann, Alex and Rutschmann, Ronja and Willemsen, Pascale}, title = {Correction to: Empirically Investigating the Concept of Lying (vol 34, pg 591, 2017)}, series = {Journal of Indian Council of Philosophical Research}, volume = {35}, journal = {Journal of Indian Council of Philosophical Research}, number = {1}, publisher = {Springer}, address = {New Dehli}, issn = {0970-7794}, doi = {10.1007/s40961-017-0123-9}, pages = {223 -- 223}, year = {2018}, language = {en} } @misc{WeisserStueblerMatheisetal.2017, author = {Weisser, Karin and St{\"u}bler, Sabine and Matheis, Walter and Huisinga, Wilhelm}, title = {Towards toxicokinetic modelling of aluminium exposure from adjuvants in medicinal products}, series = {Regulatory toxicology and pharmacology : official journal of the International Society for Regulatory Toxicology and Pharmacology}, volume = {88}, journal = {Regulatory toxicology and pharmacology : official journal of the International Society for Regulatory Toxicology and Pharmacology}, publisher = {Elsevier}, address = {San Diego}, issn = {0273-2300}, doi = {10.1016/j.yrtph.2017.02.018}, pages = {310 -- 321}, year = {2017}, abstract = {As a potentially toxic agent on nervous system and bone, the safety of aluminium exposure from adjuvants in vaccines and subcutaneous immune therapy (SCIT) products has to be continuously reevaluated, especially regarding concomitant administrations. For this purpose, knowledge on absorption and disposition of aluminium in plasma and tissues is essential. Pharmacokinetic data after vaccination in humans, however, are not available, and for methodological and ethical reasons difficult to obtain. To overcome these limitations, we discuss the possibility of an in vitro-in silico approach combining a toxicokinetic model for aluminium disposition with biorelevant kinetic absorption parameters from adjuvants. We critically review available kinetic aluminium-26 data for model building and, on the basis of a reparameterized toxicokinetic model (Nolte et al., 2001), we identify main modelling gaps. The potential of in vitro dissolution experiments for the prediction of intramuscular absorption kinetics of aluminium after vaccination is explored. It becomes apparent that there is need for detailed in vitro dissolution and in vivo absorption data to establish an in vitro-in vivo correlation (IVIVC) for aluminium adjuvants. We conclude that a combination of new experimental data and further refinement of the Nolte model has the potential to fill a gap in aluminium risk assessment. (C) 2017 Elsevier Inc. All rights reserved.}, language = {en} } @misc{TiedemannPfautsch2006, author = {Tiedemann, Ralph and Pfautsch, Simone}, title = {MHC evolution in ducks and allies}, series = {Journal of ornithology}, volume = {147}, journal = {Journal of ornithology}, number = {Supplement 1}, publisher = {Blackwell}, address = {New York}, issn = {0021-8375}, pages = {48 -- 48}, year = {2006}, language = {en} } @misc{TenFreyhausHuntgeburthWingleretal.2006, author = {Ten Freyhaus, Henrik and Huntgeburth, Michael and Wingler, Kirstin and Baeumer, A. T. and Wartenberg, Maria and Sauer, H. and Bekhite, Mohamed M. and Rosenkranz, S.}, title = {Inhibition of ROS liberation by the novel nox inhibitor VAS2870 attenuates PDGF-dependent src activation and chemotaxis, but not proliferation in vascular smooth muscle cells}, series = {European heart journal}, volume = {27}, journal = {European heart journal}, publisher = {Oxford University Press}, address = {Oxford}, issn = {0195-668X}, pages = {965 -- 965}, year = {2006}, language = {en} } @misc{SynodinosEldridgeGeissleretal.2018, author = {Synodinos, Alexios D. and Eldridge, David and Geißler, Katja and Jeltsch, Florian and Lohmann, Dirk and Midgley, Guy and Blaum, Niels}, title = {Remotely sensed canopy height reveals three pantropical ecosystem states}, series = {Ecology : a publication of the Ecological Society of America}, volume = {99}, journal = {Ecology : a publication of the Ecological Society of America}, number = {1}, publisher = {Wiley}, address = {Hoboken}, issn = {0012-9658}, doi = {10.1002/ecy.1997}, pages = {231 -- 234}, year = {2018}, language = {en} } @misc{StankeWengerBieretal.2017, author = {Stanke, S. and Wenger, C. and Bier, Frank Fabian and H{\"o}lzel, Ralph}, title = {Dielectrophoretic functionalization of nanoelectrode arrays for the detection of influenza viruses}, series = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, volume = {46}, journal = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, publisher = {Springer}, address = {New York}, issn = {0175-7571}, pages = {S337 -- S337}, year = {2017}, language = {en} } @misc{SowemimoBorcherdsKnoxBrownetal.2019, author = {Sowemimo, Oluwakemi and Borcherds, Wade and Knox-Brown, Patrick and Rindfleisch, Tobias and Thalhammer, Anja and Daughdrill, Gary}, title = {Evolution of Transient Helicity and Disorder in Late Embryogenesis Abundant Protein COR15A}, series = {Biophysical journal}, volume = {116}, journal = {Biophysical journal}, number = {3}, publisher = {Cell Press}, address = {Cambridge}, issn = {0006-3495}, doi = {10.1016/j.bpj.2018.11.2553}, pages = {473A -- 473A}, year = {2019}, abstract = {Cold regulated protein 15A (COR15A) is a nuclear encoded, intrinsically disordered protein that is found in Arabidopsis thaliana. It belongs to the Late Embryogenesis Abundant (LEA) family of proteins and is responsible for increased freezing tolerance in plants. COR15A is intrinsically disordered in dilute solutions and adopts a helical structure upon dehydration or in the presence of co-solutes such as TFE and ethylene glycol. This helical structure is thought to be important for protecting plants from dehydration induced by freezing. Multiple protein sequence alignments revealed the presence of several conserved glycine residues that we hypothesize keeps COR15A from becoming helical in dilute solutions. Using AGADIR, the change in helical content of COR15A when these conserved glycine residues were mutated to alanine residues was predicted. Based on the predictions, glycine to alanine mutants were made at position 68, and 54,68,81, and 84. Labeled samples of wildtype COR15A and mutant proteins were purified and NMR experiments were performed to examine any structural changes induced by the mutations. To test the effects of dehydration on the structure of COR15A, trifluoroethanol, an alcohol based co solvent that is proposed to induce/stabilize helical structure in peptides was added to the NMR samples, and the results of the experiment showed an increase in helical content, compared to the samples without TFE. To test the functional differences between wild type and the mutants, liposome leakage assays were performed. The results from these assays suggest the more helical mutants may augment membrane stability.}, language = {en} } @misc{SicardLenhard2018, author = {Sicard, Adrien and Lenhard, Michael}, title = {Capsella}, series = {Current biology}, volume = {28}, journal = {Current biology}, number = {17}, publisher = {Cell Press}, address = {Cambridge}, issn = {0960-9822}, doi = {10.1016/j.cub.2018.06.033}, pages = {R920 -- R921}, year = {2018}, language = {en} } @misc{SeyfriedRoedel2020, author = {Seyfried, Salim and R{\"o}del, Claudia Jasmin}, title = {Blood flow matters in a zebrafish model of cerebral cavernous malformations}, series = {Circulation research : an official journal of the American Heart Association}, volume = {126}, journal = {Circulation research : an official journal of the American Heart Association}, number = {1}, publisher = {Lippincott Williams \& Wilkins}, address = {Baltimore, Md.}, issn = {0009-7330}, doi = {10.1161/CIRCRESAHA.119.316286}, pages = {E1 -- E2}, year = {2020}, language = {en} } @misc{SchurrEslerSlingsbyetal.2012, author = {Schurr, Frank Martin and Esler, Karen J. and Slingsby, Jasper A. and Allsopp, Nicky}, title = {Fynbos proteaceae as model organisms for biodiversity research and conservation}, series = {South African journal of science}, volume = {108}, journal = {South African journal of science}, number = {11-12}, publisher = {Academy of Science of South Africa}, address = {Lynwood Ridge}, issn = {0038-2353}, doi = {10.4102/sajs.v108i11/12.1446}, pages = {10 -- 13}, year = {2012}, language = {en} } @misc{SchmollSchurrWinkeletal.2006, author = {Schmoll, Tim and Schurr, Frank Martin and Winkel, W. and Lubjuhn, Thomas}, title = {Female extra-pair mating, fitness and genetic diversity: Expression in socially monogamous Coal Tits}, series = {Journal of ornithology}, volume = {147}, journal = {Journal of ornithology}, publisher = {Elsevier}, address = {New York}, issn = {0021-8375}, pages = {248 -- 248}, year = {2006}, language = {en} } @misc{SchellerSakarDasdan2016, author = {Scheller, Frieder W. and Sakar Dasdan, Dolunay}, title = {Selected papers presented on the 2nd International Conference on the New Trends in Chemistry, Zagreb, Croatia, April 19-22, 2016 Preface}, series = {Bulgarian chemical communications : journal of the Chemical Institutes of the Bulgarian Academy of Sciences and of the Bulgarian Chemical Society = Izvestija po chimija}, volume = {48}, journal = {Bulgarian chemical communications : journal of the Chemical Institutes of the Bulgarian Academy of Sciences and of the Bulgarian Chemical Society = Izvestija po chimija}, publisher = {Bulgarian Academy of Sciences}, address = {Sofia}, issn = {0324-1130}, pages = {4 -- 4}, year = {2016}, language = {en} } @misc{Scheffler2017, author = {Scheffler, Tatjana}, title = {Root infinitives on Twitter}, series = {Snippets}, journal = {Snippets}, number = {31}, publisher = {Editioni Universit{\`a} di Lettere Economica Diritto}, address = {Milano}, issn = {1590-1807}, doi = {10.7358/snip-2017-031-sche}, pages = {24 -- 25}, year = {2017}, language = {en} } @misc{SammlerKetmaierHavensteinetal.2013, author = {Sammler, Svenja and Ketmaier, Valerio and Havenstein, Katja and Tiedemann, Ralph}, title = {Intraspecific rearrangement of duplicated mitochondrial control regions in the luzon tarictic hornbill penelopides manillae (Aves: Bucerotidae)}, series = {Journal of molecular evolution}, volume = {77}, journal = {Journal of molecular evolution}, number = {5-6}, publisher = {Springer}, address = {New York}, issn = {0022-2844}, doi = {10.1007/s00239-013-9591-y}, pages = {199 -- 205}, year = {2013}, abstract = {Philippine hornbills of the genera Aceros and Penelopides (Bucerotidae) are known to possess a large tandemly duplicated fragment in their mitochondrial genome, whose paralogous parts largely evolve in concert. In the present study, we surveyed the two distinguishable duplicated control regions in several individuals of the Luzon Tarictic Hornbill Penelopides manillae, compare their characteristics within and across individuals, and report on an intraspecific mitochondrial gene rearrangement found in one single specimen, i.e., an interchange between the two control regions. To our knowledge, this is the first observation of two distinct mitochondrial genome rearrangements within a bird species. We briefly discuss a possible evolutionary mechanism responsible for this pattern, and highlight potential implications for the application of control region sequences as a marker in population genetics and phylogeography.}, language = {en} } @misc{RudKaethnerGiesseretal.2018, author = {Rud, R. and K{\"a}thner, Jana and Giesser, J. and Pasche, R. and Giebel, Antje and Selbeck, J{\"o}rn and Shenderey, C. and Fleury, D. and Zude-Sasse, Manuela and Alchanatis, Victor}, title = {Monitoring spatial variability in an apple orchard under different water regimes}, series = {International Symposium on Sensing Plant Water Status - Methods and Applications in Horticultural Science}, volume = {1197}, journal = {International Symposium on Sensing Plant Water Status - Methods and Applications in Horticultural Science}, publisher = {International Society for Horticultural Science}, address = {The Hague}, isbn = {978-94-62611-93-1}, issn = {0567-7572}, doi = {10.17660/ActaHortic.2018.1197.19}, pages = {139 -- 146}, year = {2018}, abstract = {Precision fruticulture addresses site or tree-adapted crop management. In the present study, soil and tree status, as well as fruit quality at harvest were analysed in a commercial apple (Malus × domestica 'Gala Brookfield'/Pajam1) orchard in a temperate climate. Trees were irrigated in addition to precipitation. Three irrigation levels (0, 50 and 100\%) were applied. Measurements included readings of apparent electrical conductivity of soil (ECa), stem water potential, canopy temperature obtained by infrared camera, and canopy volume estimated by LiDAR and RGB colour imaging. Laboratory analyses of 6 trees per treatment were done on fruit considering the pigment contents and quality parameters. Midday stem water potential (SWP), normalized crop water stress index (CWSI) calculated from thermal data, and fruit yield and quality at harvest were analysed. Spatial patterns of the variability of tree water status were estimated by CWSI imaging supported by SWP readings. CWSI ranged from 0.1 to 0.7 indicating high variability due to irrigation and precipitation. Canopy volume data were less variable. Soil ECa appeared homogeneous in the range of 0 to 4 mS m-1. Fruit harvested in a drought stress zone showed enhanced portion of pheophytin in the chlorophyll pool. Irrigation affected soluble solids content and, hence, the quality of fruit. Overall, results highlighted that spatial variation in orchards can be found even if marginal variability of soil properties can be assumed.}, language = {en} } @misc{RodriguezSillkeSteinhoffBojarskietal.2019, author = {Rodriguez-Sillke, Yasmina and Steinhoff, U. and Bojarski, Christian and Lissner, Donata and Schumann, Michael and Branchi, F. and Siegmund, Britta and Glauben, Rainer}, title = {Deep immune profiling of human Peyer´s Patches in patients of inflammatory bowel diseases}, series = {European journal of immunology}, volume = {49}, journal = {European journal of immunology}, publisher = {Wiley}, address = {Weinheim}, issn = {0014-2980}, doi = {10.1002/eji.201970300}, pages = {203 -- 204}, year = {2019}, language = {en} } @misc{RadchukKramerSchadtGrimm2019, author = {Radchuk, Viktoriia and Kramer-Schadt, Stephanie and Grimm, Volker}, title = {Transferability of mechanistic ecological models is about emergence}, series = {Trends in ecology and evolution}, volume = {34}, journal = {Trends in ecology and evolution}, number = {6}, publisher = {Elsevier}, address = {London}, issn = {0169-5347}, doi = {10.1016/j.tree.2019.01.010}, pages = {487 -- 488}, year = {2019}, language = {en} } @misc{PokornySharmaGoyaletal.2011, author = {Pokorny, Ina and Sharma, Reeta and Goyal, Surendra Prakash and Mishra, Sudanshu and Tiedemann, Ralph}, title = {MHC class I and MHC class II DRB gene variability in wild and captive Bengal tigers (Panthera tigris tigris) (vol 10, pg 667, 2010)}, series = {Immunogenetics}, volume = {63}, journal = {Immunogenetics}, number = {2}, publisher = {Springer}, address = {New York}, issn = {0093-7711}, doi = {10.1007/s00251-010-0496-2}, pages = {121 -- 121}, year = {2011}, language = {en} } @misc{NumbergerDreierVullioudetal.2019, author = {Numberger, Daniela and Dreier, Carola and Vullioud, Colin and Gabriel, Guelsah and Greenwood, Alex D. and Grossart, Hans-Peter}, title = {Correction: Recovery of influenza A viruses from lake water and sediments by experimental inoculation (vol 14, e0216880, 2019)}, series = {PLoS one}, volume = {14}, journal = {PLoS one}, number = {6}, publisher = {PLoS}, address = {San Fransisco}, issn = {1932-6203}, doi = {10.1371/journal.pone.0218882}, pages = {1}, year = {2019}, language = {en} } @misc{NikoloskivanDongen2011, author = {Nikoloski, Zoran and van Dongen, Joost T.}, title = {Modeling alternatives for interpreting the change in oxygen-consumption rates during hypoxic conditions}, series = {New phytologist : international journal of plant science}, volume = {190}, journal = {New phytologist : international journal of plant science}, number = {2}, publisher = {Wiley-Blackwell}, address = {Malden}, issn = {0028-646X}, doi = {10.1111/j.1469-8137.2011.03674.x}, pages = {273 -- 276}, year = {2011}, language = {en} } @misc{NeyeWallschlaegerTiedemann2006, author = {Neye, Gundula and Wallschl{\"a}ger, Hans-Dieter and Tiedemann, Ralph}, title = {Song dialect boundaries in the Yellowhammer: Do they restrict gene flow?}, series = {Journal of ornithology}, volume = {147}, journal = {Journal of ornithology}, number = {Supplement 1}, publisher = {Blackwell}, address = {New York}, issn = {0021-8375}, pages = {219 -- 219}, year = {2006}, language = {en} } @misc{NathanHorvitzHeetal.2011, author = {Nathan, Ran and Horvitz, Nir and He, Yanping and Kuparinen, Anna and Schurr, Frank Martin and Katul, Gabriel G.}, title = {Spread of North American wind-dispersed trees in future environments}, series = {Ecology letters}, volume = {14}, journal = {Ecology letters}, number = {3}, publisher = {Wiley-Blackwell}, address = {Malden}, issn = {1461-023X}, doi = {10.1111/j.1461-0248.2010.01573.x}, pages = {211 -- 219}, year = {2011}, abstract = {P>Despite ample research, understanding plant spread and predicting their ability to track projected climate changes remain a formidable challenge to be confronted. We modelled the spread of North American wind-dispersed trees in current and future (c. 2060) conditions, accounting for variation in 10 key dispersal, demographic and environmental factors affecting population spread. Predicted spread rates vary substantially among 12 study species, primarily due to inter-specific variation in maturation age, fecundity and seed terminal velocity. Future spread is predicted to be faster if atmospheric CO2 enrichment would increase fecundity and advance maturation, irrespective of the projected changes in mean surface windspeed. Yet, for only a few species, predicted wind-driven spread will match future climate changes, conditioned on seed abscission occurring only in strong winds and environmental conditions favouring high survival of the farthest-dispersed seeds. Because such conditions are unlikely, North American wind-dispersed trees are expected to lag behind the projected climate range shift.}, language = {en} } @misc{MuellerSchoellKloppSchulzeHuisingaetal.2019, author = {M{\"u}ller-Sch{\"o}ll, A. and Klopp-Schulze, Lena and Huisinga, Wilhelm and J{\"o}rger, M. and Neven, P. and Koolen, S. L. and Mathijssen, R. H. J. and Schmidt, S. and Kloft, Charlotte}, title = {Patient-tailored tamoxifen dosing based on an increased quantitative understanding of its complex pharmacokinetics: A novel integrative modelling approach}, series = {Annals of Oncology}, volume = {30}, journal = {Annals of Oncology}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {0923-7534}, pages = {1}, year = {2019}, language = {en} } @misc{MogaRobinsonLeimkuehler2019, author = {Moga, A. and Robinson, T. and Leimk{\"u}hler, Silke}, title = {Towards reconstituting a biosynthetic pathway within compartmentalized GUVs}, series = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, volume = {48}, journal = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, publisher = {Springer}, address = {New York}, issn = {0175-7571}, pages = {S218 -- S218}, year = {2019}, language = {en} } @misc{MesserschmidtMachensHochreinetal.2018, author = {Messerschmidt, Katrin and Machens, Fabian and Hochrein, Lena and Naseri, Gita}, title = {Orthogonal, light-inducible protein expression platform in yeast Sacchararomyces cerevisiae}, series = {New biotechnology}, volume = {44}, journal = {New biotechnology}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1871-6784}, doi = {10.1016/j.nbt.2018.05.153}, pages = {S19 -- S19}, year = {2018}, language = {en} } @misc{MaierHolzloehnerHoenowetal.2016, author = {Maier, Natalia and Holzl{\"o}hner, Pamela and Hoenow, Anja and Scheunemann, Astrid and Weschke, Daniel and Hanack, Katja}, title = {Characterization of monoclonal antibodies generated by in vitro immunization}, series = {The journal of immunology}, volume = {196}, journal = {The journal of immunology}, publisher = {American Assoc. of Immunologists}, address = {Bethesda}, issn = {0022-1767}, pages = {2}, year = {2016}, abstract = {Monoclonal antibodies are highly valuable tools in biomedicine but the generation by hybridoma technology is very time-consuming and elaborate. In order to circumvent the consisting drawbacks an in vitro immunization approach was established by which murine as well as human monoclonal antibodies against a viral coat protein could be developed. The in vitro immunization process was performed by isolation of murine hematopoietic stem cells or human monocytes and an in vitro differentiation into immature dendritic cells. After antigen loading the cells were co-cultivated with naive T and B lymphocytes for three days in order to obtain antigen-specific B lymphocytes in culture, followed by fusion with murine myeloma cells or human/murine heteromyeloma cells. Antigen-specific hybridomas were selected and the generated antibodies were purified and characterized in this study by ELISA, western blot, gene sequencing, affinity measurements. Further the characteristics were compared to a monoclonal antibody against the same target generated by conventional hybridoma technology. Isotype detection revealed a murine IgM and a human IgG4 antibody in comparison to an IgG1 for the conventionally generated antibody. The antibodies derived from in vitro immunization showed indeed a lower affinity for the antigen as compared to the conventionally generated one, which is probably based on the significantly shorter B cell maturation (3 days) during the immunization process. Nevertheless, they were suitable for building up a sandwich based detection system. Therefore, the in vitro immunization approach seems to be a good and particularly fast alternative to conventional hybridoma technology.}, language = {en} } @misc{MaddenDingleIsdenetal.2012, author = {Madden, Joah R. and Dingle, Caroline and Isden, Jess and Sparteld, Janka and Goldizen, Anne W. and Endler, John A.}, title = {Male spotted bowerbirds propagate fruit for use in their sexual display}, series = {Current biology}, volume = {22}, journal = {Current biology}, number = {8}, publisher = {Cell Press}, address = {Cambridge}, issn = {0960-9822}, doi = {10.1016/j.cub.2012.02.057}, pages = {R264 -- R265}, year = {2012}, language = {en} } @misc{LucknerDunsingDruekeetal.2019, author = {Luckner, Madlen and Dunsing, Valentin and Dr{\"u}ke, Markus and Zuehlke, B. and Petazzi, Roberto Arturo and Chiantia, Salvatore and Herrmann, A.}, title = {Quantifying protein oligomerization directly in living cells}, series = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, volume = {48}, journal = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, publisher = {Springer}, address = {New York}, issn = {0175-7571}, pages = {S183 -- S183}, year = {2019}, language = {en} } @misc{LucknerDunsingChiantiaetal.2017, author = {Luckner, Madlen and Dunsing, Valentin and Chiantia, Salvatore and Herrmann, Andreas}, title = {Influenza virus vRNPs: quantitative investigations via fluorescence cross-correlation spectroscopy}, series = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, volume = {46}, journal = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, publisher = {Springer}, address = {New York}, issn = {0175-7571}, pages = {S368 -- S368}, year = {2017}, language = {en} } @misc{LucknerDunsingChiantiaetal.2018, author = {Luckner, Madlen and Dunsing, Valentin and Chiantia, Salvatore and Hermann, Andreas}, title = {Oligomerization and nuclear shuttling dynamics of viral proteins studied by quantitative molecular brightness analysis using fluorescence correlation spectroscopy}, series = {Biophysical journal}, volume = {114}, journal = {Biophysical journal}, number = {3}, publisher = {Cell Press}, address = {Cambridge}, issn = {0006-3495}, doi = {10.1016/j.bpj.2017.11.1951}, pages = {350A -- 350A}, year = {2018}, language = {en} } @misc{LouMaLinetal.2006, author = {Lou, Ying and Ma, Hui and Lin, Wen-Hui and Chu, Zhao-Quing and M{\"u}ller-R{\"o}ber, Bernd and Xu, Zhi-Hong and Xue, Hong-Wei}, title = {The highly charged region of plant beta-type phosphatidylinositol 4-kinase is involved in membrane targeting and phospholipid binding}, issn = {0167-4412}, doi = {10.1007/s11103-005-5548-x}, year = {2006}, abstract = {In Arabidopsis thaliana and Oryza sativa, two types of PI 4-kinase (PI4Ks) have been isolated and functionally characterized. The alpha-type PI4Ks (similar to 220 kDa) contain a PH domain, which is lacking in beta-type PI4Ks (similar to 120 kDa). beta-Type PI4Ks, exemplified by Arabidopsis AtPI4K beta and rice OsPI4K2, contain a highly charged repetitive segment designated PPC (Plant PI4K Charged) region, which is an unique domain only found in plant beta-type PI4Ks at present. The PPC region has a length of similar to 300 amino acids and harboring 11 (AtPI4K beta) and 14 (OsPI4K2) repeats, respectively, of a 20-aa motif. Studies employing a modified yeast-based "Sequence of Membrane- Targeting Detection'' system demonstrate that the PPC(OsPI4K2) region, as well as the former 8 and latter 6 repetitive motifs within the PPC region, are able to target fusion proteins to the plasma membrane. Further detection on the transiently expressed GFP fusion proteins in onion epidermal cells showed that the PPC(OsPI4K2) region alone, as well as the region containing repetitive motifs 1-8, was able to direct GFP to the plasma membrane, while the regions containing less repetitive motifs, i.e. 6, 4, 2 or single motif(s) led to predominantly intracellular localization. Agrobacterium-mediated transient expression of PPC-GFP fusion protein further confirms the membrane-targeting capacities of PPC region. In addition, the predominant plasma membrane localization of AtPI4Kb was mediated by the PPC region. Recombinant PPC peptide, expressed in E. coli, strongly binds phosphatidic acid, PI and PI4P, but not phosphatidylcholine, PI5P, or PI(4,5) P-2 in vitro, providing insights into potential mechanisms for regulating sub- cellular localization and lipid binding for the plant beta-type PI4Ks}, language = {en} } @misc{Lenhard2017, author = {Lenhard, Michael}, title = {Plant Development: Keeping on the Straight and Narrow and Flat}, series = {Current biology}, volume = {27}, journal = {Current biology}, publisher = {Cell Press}, address = {Cambridge}, issn = {0960-9822}, doi = {10.1016/j.cub.2017.10.030}, pages = {R1277 -- R1280}, year = {2017}, language = {en} } @misc{LechonSanzPollmannetal.2016, author = {Lechon, Tamara and Sanz, Luis and Pollmann, Stephan and Sauer, Michael and Sandalio, Luisa and Lorenzo, Oscar}, title = {Nitric oxide modification of plant endocytosis and PIN1 localization}, series = {New biotechnology}, volume = {33}, journal = {New biotechnology}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1871-6784}, doi = {10.1016/j.nbt.2015.10.028}, pages = {424 -- 424}, year = {2016}, language = {en} } @misc{LauxKniggeWengeretal.2017, author = {Laux, Eva-Maria and Knigge, Xenia and Wenger, C. and Bier, Frank Fabian and H{\"o}lzel, Ralph}, title = {AC electrokinetic manipulation of nanoparticles and molecules}, series = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, volume = {46}, journal = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, publisher = {Springer}, address = {New York}, issn = {0175-7571}, pages = {S189 -- S189}, year = {2017}, language = {en} } @misc{LauxGibbonsErmilovaetal.2017, author = {Laux, Eva-Maria and Gibbons, J. and Ermilova, Elena and Bier, Frank Fabian and H{\"o}lzel, Ralph}, title = {Broadband dielectric spectroscopy of bovine serum albumin in the GHz range}, series = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, volume = {46}, journal = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, publisher = {Springer}, address = {New York}, issn = {0175-7571}, pages = {S347 -- S347}, year = {2017}, language = {en} } @misc{LauxDocoslisWengeretal.2017, author = {Laux, Eva-Maria and Docoslis, A. and Wenger, C. and Bier, Frank Fabian and H{\"o}lzel, Ralph}, title = {Combination of dielectrophoresis and SERS for bacteria detection and characterization}, series = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, volume = {46}, journal = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, publisher = {Springer}, address = {New York}, issn = {0175-7571}, pages = {S331 -- S331}, year = {2017}, language = {en} } @misc{Koechy2006, author = {K{\"o}chy, Martin}, title = {Photodegradation of grass litter in semi-arid grasslands : a global perspective}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-12006}, year = {2006}, abstract = {In a recent contribution in Nature (vol. 442, pp. 555-558) Austin \& Vivanco showed that sunlight is the dominant factor for decomposition of grass litter in a semi-arid grassland in Argentine. The quantification of this effect was portrayed as a novel finding. I put this result in the context of three other publications from as early as 1980 that quantified photodegradation. My synopsis shows that photodegradation is an important process in semi-arid grasslands in South America, North America and eastern Europe.}, language = {en} } @misc{KramerLenhard2017, author = {Kramer, Elena M. and Lenhard, Michael}, title = {Shape and form in plant development}, series = {Seminars in cell \& developmental biology}, volume = {79}, journal = {Seminars in cell \& developmental biology}, publisher = {Elsevier}, address = {London}, issn = {1084-9521}, doi = {10.1016/j.semcdb.2017.11.004}, pages = {1 -- 2}, year = {2017}, language = {en} } @misc{KozielHermanussenGomulaetal.2017, author = {Koziel, Slawomir and Hermanussen, Michael and Gomula, Alexandra and Swanson, James and Kaczmarek, Maria and El-Shabrawi, Mortada and Elhusseini, Mona and Satake, Takashi and Martinovic Klaric, Irena and Scheffler, Christiane and Morkuniene, Ruta and Godina, Elena and Sasa, Missoni and Tutkuviene, Janina and Siniarska, Anna and Nieczuja-Dwojacka, Joanna and Nunez, Javier and Groth, Detlef and Barbieri, Davide}, title = {Adolescence - a Transition to Adulthood Proceedings of the 24th Aschauer Soiree, held at Jurata, Poland, November 5th 2016}, series = {Pediatric Endocrinology Reviews}, volume = {14}, journal = {Pediatric Endocrinology Reviews}, number = {3}, publisher = {Medical Media}, address = {Netanya}, issn = {1565-4753}, pages = {326 -- 334}, year = {2017}, abstract = {Eighteen scientists met at Jurata, Poland, to discuss various aspects of the transition from adolescence to adulthood. This transition is a delicate period facing complex interactions between the adolescents and the social group they belong to. Social identity, group identification and identity signalling, but also stress affecting basal salivary cortisol rhythms, hypertension, inappropriate nutrition causing latent and manifest obesity, moreover, in developing and under-developed countries, parasitosis causing anaemia thereby impairing growth and development, are issues to be dealt with during this period of the human development. In addition, some new aspects of the association between weight, height and head circumference in the newborns were discussed, as well as intrauterine head growth and head circumference as health risk indicators.}, language = {en} } @misc{KocyanWilandSzymanska2017, author = {Kocyan, Alexander and Wiland-Szymanska, Justyna}, title = {A new name and a new combination for Friedmannia nom. illeg. (Hypoxidaceae)}, series = {Phytotaxa : a rapid international journal for accelerating the publication of botanical taxonomy}, volume = {291}, journal = {Phytotaxa : a rapid international journal for accelerating the publication of botanical taxonomy}, number = {3}, publisher = {Magnolia Press}, address = {Auckland}, issn = {1179-3155}, doi = {10.11646/phytotaxa.291.3.10}, pages = {239 -- 239}, year = {2017}, abstract = {Recently, Kocyan \& Wiland-Szymańska (2016) have published a thorough research article on one of the outstanding members of the family Hypoxidaceae on the Seychelles, which resulted in the raise of a new genus (Friedmannia Kocyan \& Wiland-Szymańska 2016: 60) to accommodate the former Curculigo seychellensis Bojer ex Baker (1877: 368). However, it has turned out that the name Friedmannia Chantanachat \& Bold (1962: 45) already exists in literature for a green alga, which renders the new hypoxid genus illegitimate (Melbourne Code; McNeill et al. 2012). Therefore, we assign a new generic epithet to Curculigo seychellensis.}, language = {en} } @misc{KniggeWengerBieretal.2017, author = {Knigge, Xenia and Wenger, C. and Bier, Frank Fabian and H{\"o}lzel, Ralph}, title = {AC electrokinetic immobilisation of nanoobjects as individual singles in regular arrays}, series = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, volume = {46}, journal = {European biophysics journal : with biophysics letters ; an international journal of biophysics}, publisher = {Springer}, address = {New York}, issn = {0175-7571}, pages = {S187 -- S187}, year = {2017}, language = {en} } @misc{KleineVehnSauer2017, author = {Kleine-Vehn, J{\"u}rgen and Sauer, Michael}, title = {Preface}, series = {Plant Hormones: Methods and Protocols}, volume = {1497}, journal = {Plant Hormones: Methods and Protocols}, editor = {Kleine-Vehn, J{\"u}rgen and Sauer, Michael}, edition = {3}, publisher = {Springer}, address = {New York}, isbn = {978-1-4939-6469-7}, issn = {1064-3745}, doi = {10.1007/978-1-4939-6469-7}, pages = {V -- V}, year = {2017}, language = {en} } @misc{Kehr2005, author = {Kehr, Julia}, title = {Untersuchungen der Proteine in den Langstreckentransportsystemen h{\"o}herer Pflanzen}, address = {Potsdam}, pages = {45 Bl. ; graph. Darst.}, year = {2005}, language = {de} } @misc{KalinkatCabralDarwalletal.2017, author = {Kalinkat, Gregor and Cabral, Juliano Sarmento and Darwall, William and Ficetola, G. Francesco and Fisher, Judith L. and Giling, Darren P. and Gosselin, Marie-Pierre and Grossart, Hans-Peter and Jaehnig, Sonja C. and Jeschke, Jonathan M. and Knopf, Klaus and Larsen, Stefano and Onandia, Gabriela and Paetzig, Marlene and Saul, Wolf-Christian and Singer, Gabriel and Sperfeld, Erik and Jaric, Ivan}, title = {Flagship umbrella species needed for the conservation of overlooked aquatic biodiversity}, series = {Conservation biology : the journal of the Society for Conservation Biology}, volume = {31}, journal = {Conservation biology : the journal of the Society for Conservation Biology}, publisher = {Wiley}, address = {Hoboken}, issn = {0888-8892}, doi = {10.1111/cobi.12813}, pages = {481 -- 485}, year = {2017}, language = {en} }