@phdthesis{Gendt2011, author = {Gendt, Anja}, title = {Eye movements under the control of working memory : the challenge of a reading-span task}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-69224}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {During reading oculomotor processes guide the eyes over the text. The visual information recorded is accessed, evaluated and processed. Only by retrieving the meaning of a word from the long-term memory, as well as through the connection and storage of the information about each individual word, is it possible to access the semantic meaning of a sentence. Therefore memory, and here in particular working memory, plays a pivotal role in the basic processes of reading. The following dissertation investigates to what extent different demands on memory and memory capacity have an effect on eye movement behavior while reading. The frequently used paradigm of the reading span task, in which test subjects read and evaluate individual sentences, was used for the experimental review of the research questions. The results speak for the fact that working memory processes have a direct effect on various eye movement measurements. Thus a high working memory load, for example, reduced the perceptual span while reading. The lower the individual working memory capacity of the reader was, the stronger was the influence of the working memory load on the processing of the sentence.}, language = {en} } @phdthesis{Hess2011, author = {Hess, Markus}, title = {Soziale Partizipation und Pers{\"o}nlichkeitsentwicklung im Vorschulalter : Begriffskl{\"a}rung und Ergebnisse einer L{\"a}ngsschnittstudie}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-66979}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Die vorliegende Arbeit betrachtet Partizipation aus einer interaktionalen Perspektive und nimmt zun{\"a}chst eine interdisziplin{\"a}r orientierte Begriffsbestimmung vor. Daran anschließend werden anhand einer L{\"a}ngsschnittstudie Entwicklungsbedingungen sozialer Partizipationskompetenzen im Vorschulalter untersucht und F{\"o}rderempfehlungen abgeleitet. Partizipation (Teilhabe) soll in Kontexten wie Schule oder Arbeitswelt Entscheidungen demokratisch legitimieren, individuelle Ressourcen aussch{\"o}pfen und soziale Grundbed{\"u}rfnisse des Menschen befriedigen. Ein engeres Verst{\"a}ndnis von sozialer Partizipation aus einer interaktionalen Perspektive erfordert die Beteiligung an den Aktivit{\"a}ten einer bereits bestehenden Gruppe und die Aushandlung eigener Interessen innerhalb dieser Gruppe und wird in der Arbeit als Prozess anhand dreier Phasen (Anbahnung, Projektierung und Realisierung) dargestellt. Im Vorschulalter werden wichtige Grundsteine f{\"u}r eine erfolgreiche soziale Entwicklung und f{\"u}r den Erwerb von sozialen Partizipationskompetenzen gelegt. In der vorliegenden Arbeit wurden deshalb die Zusammenh{\"a}nge und Wechselwirkungen zwischen sozialen Partizipationskompetenzen (Bereitschaft und F{\"a}higkeit) und (1) kognitiven Leistungsparametern (Intelligenz und Perspektiven{\"u}bernahme), (2) dem Selbstkonzept und (3) dem Konfliktverhalten (Aggression und Sch{\"u}chternheit) mit 5- bis 7j{\"a}hrigen Kindern mit Hilfe von Kreuzpfadanalysen untersucht. Zudem wurde die Situationsgebundenheit sozialer Partizipationskompetenzen und die Bedeutung struktureller Parameter der Familie und der Kindertageseinrichtung auf explorativer Ebene analysiert. Die Stichprobe bestand aus 334 Kindern (51,5 \% weiblich, Altersdurchschnitt zum ersten Messzeitpunkt 5,4 Jahre) in 71 Kindergartengruppen in 21 Kindertageseinrichtungen in vier Bundesl{\"a}ndern. Die l{\"a}ngsschnittliche Datenanalyse basiert auf drei Messzeitpunkten. Die Ergebnisse zeigen, dass soziale Partizipationskompetenzen {\"u}ber verschiedene Situationen hinweg bedeutsame, aber nur m{\"a}ßig ausgepr{\"a}gte, Zusammenh{\"a}nge aufweisen. Hohe Auspr{\"a}gungen kognitiver Leistungsparameter gehen mit hohen Erziehereinsch{\"a}tzungen sozialer Partizipationskompetenzen einher. {\"U}ber die Zusammenh{\"a}nge hinaus zeigen sich im L{\"a}ngsschnitt bedeutsame Wechselwirkungen zwischen kognitiver Entwicklung und sozialen Partizipationskompetenzen im Vorschulalter. Selbsteinsch{\"a}tzungen zur eigenen Kompetenz h{\"a}ngen im Vorschulalter hingegen nur gering mit Erziehereinsch{\"a}tzungen der sozialen Partizipationskompetenz zusammen. Im L{\"a}ngsschnitt zeigt sich, dass junge Kinder bei der Beurteilung ihrer Kompetenzen zun{\"a}chst auf soziale Partizipationserfolge zur{\"u}ckgreifen. Sp{\"a}ter hingegen scheint der Partizipationserfolg dann umgekehrt eher durch das Selbstbild bedingt zu sein. Geringe Partizipationskompetenzen gehen mit hohen Erziehereinsch{\"a}tzungen beim aggressiven (schwach signifikant) und sch{\"u}chternen Verhalten (m{\"a}ßig signifikant) einher. Hinsichtlich der Aggression und des sch{\"u}chternen Verhaltens ergaben sich l{\"a}ngsschnittlich betrachtet nur schwache Wechselwirkungen zur sozialen Partizipationskompetenz. Die Kumulation famili{\"a}rer Belastungssituationen (z.B. Krankheit und akute Finanznot) stellen eine gr{\"o}ßere Bedrohung f{\"u}r die kindliche Entwicklung dar als der sozio-{\"o}konomische Status der Familie. Mit Blick auf die F{\"o}rderung sozialer Partizipationskompetenzen lassen sich die Ergebnisse mit einem sozial-konstruktivistischen Ansatz verbinden. Dessen Ziel ist es, intra- und interpersonelle Konflikte auszul{\"o}sen, deren erfolgreiche Bew{\"a}ltigung produktive Lernprozesse auf kognitiver, emotionaler und behavioraler Ebene anstoßen.}, language = {de} } @phdthesis{Partskhaladze2011, author = {Partskhaladze, Vakhtang}, title = {Development perspectives of small and medium businesses in Georgia}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-66397}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {After the collapse of the Soviet Union the former member states have started the transformation process. The transformation process from planned to market economy includes not only the adaptation of the economy to the new market rules but also the profound social and political transformation. For this reason such processes present huge challenges to affected societies. The transformational recession in Georgia was significantly enhanced by the civil war and by ethnic conflicts in Abkhazia and South Ossetia. During the ethnic conflicts and civil war the business and technical infrastructure were damaged and most of them were completely destroyed. Poverty and political instability were predominated. The trade relations with the member countries of Council of Mutual Economic Assistance (Comecon) were aborted. Moreover, the conflict in South Ossetia hampered the power supply from Russia and a conflict in Abkhazia, the production and trade with tea and citruses, which were major trade commodities at that time. In the beginning of 90-ies, Georgian government with the assistance of international organizations, such as International Monetary Fund and World Bank started to elaborate political and economical reforms. The reforms included several aspects, such as the transfer of public assets to private through privatization, the liberalization of domestic market and trade and the creation of market-oriented institutions. Because of lack in implementation neither economical nor political transformation has been achieved. For instance, by the begin of market oriented reforms the awareness of policy makers about the importance of entrepreneurship, in particular small and medium ones for the economy was low. The absence of previous experience prevented the elaboration of appropriate policy instruments and methods for the development of competitive market economy. The stimulation of private sector has been generally neglected. This had a severe affect on political, social and economical problems, which still hampers the development of middle class in Georgia. The presented research indicates that productive entrepreneurship is a driving force of an economy. The entrepreneurial activities on the one hand facilitate the resource allocation and on the other through the development of new products and services urge the competition. Furthermore, they contribute to technological improvements through innovation, create jobs and thus boost the economic and social development of a particular region or country. However, it is important that the legal and institutional framework is appropriately settled. Unlike mature market economies, Georgia is not characterized by well-developed sector of small and medium sized businesses. Most existing SMEs are operating in local markets and predominantly in the shadow economy. It is also noteworthy that small business in Georgia belongs to so called "mom and pop" rather than to innovative, growth oriented businesses. They are mostly engaged in trade and craft. In addition of poor performance, the business activity of SMEs is very centralized. The vast majority of them are operating in the capital Tbilisi. The poor performance of small and medium businesses in Georgia and their negligence by the market forces is among others due to the armed conflicts and state failure. As in the beginning of transformation process, down to the present day, the state fails to provide necessary conditions, such as rule of law, the protection of property rights and competition, transparent and uncorrupted public administration. The result is the weak middle class. The weak middle class by itself has a negative impact on economic development and democratization process in Georgia.}, language = {de} } @phdthesis{Wang2011, author = {Wang, Yongbo}, title = {Late glacial to Holocene climate and vegetation changes on the Tibetan Plateau inferred from fossil pollen records in lacustrine sediments}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-63155}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {The past climate in central Asia, and especially on the Tibetan Plateau (TP), is of great importance for an understanding of global climate processes and for predicting the future climate. As a major influence on the climate in this region, the Asian Summer Monsoon (ASM) and its evolutionary history are of vital importance for accurate predictions. However, neither the evolutionary pattern of the summer monsoon nor the driving mechanisms behind it are yet clearly understood. For this research, I first synthesized previously published Late Glacial to Holocene climatic records from monsoonal central Asia in order to extract the general climate signals and the associated summer monsoon intensities. New climate and vegetation sequences were then established using improved quantitative methods, focusing on fossil pollen records recovered from Tibetan lakes and also incorporating new modern datasets. The pollen-vegetation and vegetation-climate relationships on the TP were also evaluated in order to achieve a better understanding of fossil pollen records. The synthesis of previously published moisture-related palaeoclimate records in monsoonal central Asia revealed generally different temporal patterns for the two monsoonal subsystems, i.e. the Indian Summer Monsoon (ISM) and East Asian Summer Monsoon (EASM). The ISM appears to have experienced maximum wet conditions during the early Holocene, while many records from the area affected by the EASM indicate relatively dry conditions at that time, particularly in north-central China where the maximum moisture levels occurred during the middle Holocene. A detailed consideration of possible driving factors affecting the summer monsoon, including summer solar insolation and sea surface temperatures, revealed that the ISM was primarily driven by variations in northern hemisphere solar insolation, and that the EASM may have been constrained by the ISM resulting in asynchronous patterns of evolution for these two subsystems. This hypothesis is further supported by modern monsoon indices estimated using the NCEP/NCAR Reanalysis data from the last 50 years, which indicate a significant negative correlation between the two summer monsoon subsystems. By analogy with the early Holocene, intensification of the ISM during coming decades could lead to increased aridification elsewhere as a result of the asynchronous nature of the monsoon subsystems, as can already be observed in the meteorological data from the last 15 years. A quantitative climate reconstruction using fossil pollen records was achieved through analysis of sediment core recovered from Lake Donggi Cona (in the north-eastern part of the TP) which has been dated back to the Last Glacial Maximum (LGM). A new data-set of modern pollen collected from large lakes in arid to semi-arid regions of central Asia is also presented herein. The concept of "pollen source area" was introduced to modern climate calibration based on pollen from large lakes, and was applied to the fossil pollen sequence from Lake Donggi Cona. Extremely dry conditions were found to have dominated the LGM, and a subsequent gradually increasing trend in moisture during the Late Glacial period was terminated by an abrupt reversion to a dry phase that lasted for about 1000 years and coincided with the first Heinrich Event of the northern Atlantic region. Subsequent periods corresponding to the warm B{\o}lling-Aller{\o}d period and the Younger Dryas cold event were followed by moist conditions during the early Holocene, with annual precipitation of up to about 400 mm. A slightly drier trend after 9 cal ka BP was then followed by a second wet phase during the middle Holocene that lasted until 4.5 cal ka BP. Relatively steady conditions with only slight fluctuations then dominated the late Holocene, resulting in the present climatic conditions. In order to investigate the relationship between vegetation and climate, temporal variations in the possible driving factors for vegetation change on the northern TP were examined using a high resolution late Holocene pollen record from Lake Kusai. Moving-window Redundancy Analyses (RDAs) were used to evaluate the correlations between pollen assemblages and individual sedimentary proxies. These analyses have revealed frequent fluctuations in the relative abundances of alpine steppe and alpine desert components, and in particular a decrease in the total vegetation cover at around 1500 cal a BP. The climate was found to have had an important influence on vegetation changes when conditions were relatively wet and stable. However, after the 1500 cal a BP threshold in vegetation cover was crossed the vegetation appears to have been affected more by extreme events such as dust storms or fluvial erosion than by the general climatic trends. In addition, pollen spectra over the last 600 years have been revealed by Procrustes analysis to be significantly different from those recovered from older samples, which is attributed to an increased human impact that resulted in unprecedented changes to the composition of the vegetation. Theoretical models that have been developed and widely applied to the European area (i.e. the Extended R-Value (ERV) model and the Regional Estimates of Vegetation Abundance from Large Sites (REVEALS) model) have been applied to the high alpine TP ecosystems in order to investigate the pollen-vegetation relationships, as well as for quantitative reconstructions of vegetation abundance. The modern pollen-vegetation relationships for four common pollen species on the TP have been investigated using Poaceae as the reference taxa. The ERV Submodel 2 yielded relatively high PPEs for the steppe and desert taxa (Artemisia Chenopodiaceae), and low PPEs for the Cyperaceae that are characteristic of the alpine Kobresia meadows. The plant abundances on the central and north-eastern TP were quantified by applying these PPEs to four post-Late Glacial fossil pollen sequences. The reconstructed vegetation assemblages for the four pollen sequences always yielded smaller compositional species turnovers than suggested by the pollen spectra, indicating that the strength of the previously-reported vegetation changes may therefore have been overestimated. In summary, the key findings of this thesis are that (a) the two ASM subsystems show asynchronous patterns during both the Holocene and modern time periods, (b) fossil pollen records from large lakes reflect regional signals for which the pollen source areas need to be taken into account, (c) climate is not always the main driver for vegetation change, and (d) previously reported vegetation changes on the TP may have been overestimated because they ignored inter-species variations in pollen productivity.}, language = {en} } @phdthesis{Laux2011, author = {Laux, Anna}, title = {Schulleitung im Mittelpunkt schulischer Gesundheit : eine Studie zu der Gesundheit schulischer F{\"u}hrungskr{\"a}fte und ihrer Rolle f{\"u}r die Lehrergesundheit}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59771}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Die neuen Anforderungen an Schulleitungen im Zuge gesellschaftlicher, schulpolitischer und schulinterner Entwicklungen sind erheblich (Huber, 2008). Diese in der Literatur breit geteilte Einsch{\"a}tzung schl{\"a}gt sich bislang nicht ausreichend in Forschungsaktivit{\"a}ten zur Gesundheit schulischer F{\"u}hrungskr{\"a}fte nieder - im Unterschied zu der ausgiebigen Forschung zur Lehrergesundheit, die f{\"u}r die Lehrer durchg{\"a}ngig eine kritische Gesundheitslage feststellt. Besondere Aufmerksamkeit erzielte dabei die Potsdamer Lehrerstudie (Schaarschmidt, 2004). Sie belegte unter anderem auch die Einflussm{\"o}glichkeiten der Schulleitung auf die Lehrergesundheit. Die vorliegende Arbeit verfolgt zwei Ziele: Erstens wird die aktuelle Schulleitungsforschung um empirische Daten zur gesundheitlichen Situation von n = 484 Schulleitungen aus Brandenburg und Baden-W{\"u}rttemberg erg{\"a}nzt. Zweitens wird die Bedeutung der Schulleitung f{\"u}r die Lehrergesundheit n{\"a}her untersucht, indem empirische Daten aus F{\"u}hrungsfeedbackverfahren mit n = 12 Schulleitungen und n = 332 Lehrern in Baden-W{\"u}rttemberg und Hessen herangezogen werden. Das diagnostische Verfahren AVEM ("Arbeitsbezogenes Verhaltens- und Erlebensmuster", Schaarschmidt \& Fischer, 1996/2003) dient als methodische Grundlage. Es erhebt Selbsteinsch{\"a}tzungen zum arbeitsbezogenen Verhalten und Erleben und weist auf m{\"o}gliche Risiken im Sinne psychischer oder psychosomatischer Gef{\"a}hrdung hin. Das Instrument erfasst mit 66 Items 11 Dimensionen (z.B. Distanzierungsf{\"a}higkeit). Auf diese Weise ist es m{\"o}glich, die befragte Person einem von vier arbeitsbezogenen Verhaltens- und Erlebensmustern zuzuordnen: Muster G (Gesundheitsideal), Muster S (Schonungstendenz gegen{\"u}ber beruflichen Anforderungen), Risikomuster A ({\"u}berh{\"o}htes Engagement), Risikomuster B (Resignation). Zudem werden Fragen zu schulischer F{\"u}hrung eingesetzt, die sich aus vorhandenen Frageb{\"o}gen speisen. Mit Hilfe einer exploratorischen Faktorenanalyse k{\"o}nnen sechs Faktoren identifiziert werden: Pers{\"o}nliche emotionale Wertsch{\"a}tzung und F{\"u}rsorge, optimistische Zukunftsorientierung, konstruktives Management des Schulbetriebs, F{\"o}rderung von Weiterbildung und p{\"a}dagogischem Diskurs, Pr{\"a}senz/Ansprechbarkeit und Partizipationsorientierung. Zu der ersten Fragestellung zeigt sich f{\"u}r die befragten Schulleitungen im Mittel ein gesundheitlich recht positives Bild - gerade im Kontrast zu den befragten Lehrern. F{\"u}r die befragten Schulleitungen wird eine signifikant g{\"u}nstigere AVEM-Musterkonstellation festgestellt: Der Anteil des Musters G ist bei den Schulleitungen deutlich h{\"o}her, der Anteil des Musters B deutlich niedriger und der Anteil des Musters A in etwa gleich groß. Die AVEM-Ergebnisse schlagen sich bei den befragten Schulleitungen in unmittelbaren Gesundheitsindikatoren nieder. F{\"u}r bestimmte Untergruppen herrscht allerdings ein gesundheitlich vergleichsweise kritisches Bild vor, n{\"a}mlich tendenziell f{\"u}r Schulleitungen in Brandenburg, f{\"u}r weibliche Schulleitungen und Schulleitungen an Grund- und F{\"o}rderschulen. Eine hohe Unterrichtsverpflichtung ist mit einem gr{\"o}ßeren Anteil an Risikomustern verbunden. Ein hohes Maß an erlebter Autonomie - insbesondere im sozial-interaktiven Bereich mit den Lehrern (d.h. bei Auswahl, Einstellung und Beurteilung von Lehrern sowie bei der innerschulischen Arbeitsorganisation und kollegialen Zusammenarbeit) - geht dagegen mit jeweils g{\"u}nstigeren AVEM-Musterkonstellationen einher. Zur Beantwortung der zweiten Fragestellung wird eine methodisch anspruchsvolle Mehrebenenanalyse durchgef{\"u}hrt, die die hierarchische Anordnung der Daten angemessen behandelt. F{\"u}r die wahrgenommene soziale Unterst{\"u}tzung durch die Schulleitung wird dabei eine negative Beziehung zur subjektiven Bedeutsamkeit der Arbeit und der Verausgabungsbereitschaft der befragten Lehrer gefunden. Hingegen ergibt sich ein positiver Zusammenhang zwischen der erlebten F{\"o}rderung von Weiterbildung und p{\"a}dagogischem Diskurs und dem Erfolgserleben der befragten Lehrer. Ebenso h{\"a}ngt die wahrgenommene F{\"u}hrung durch die Schulleitung in ihrer Gesamtheit in positiver Weise mit der Lebenszufriedenheit der befragten Lehrer zusammen. Es sei betont, dass ausschließlich Effekte nachgewiesen werden, die auf die individuelle Ebene der Lehrer zur{\"u}ckgehen, d.h. es scheint - was den Zusammenhang zwischen erlebter F{\"u}hrung und Lehrergesundheit angeht - auf die subjektive Wahrnehmung des F{\"u}hrungsverhaltens der Schulleitung durch den/die jeweilige(n) Lehrer/in anzukommen. Eine erste theoretische Skizze zu wesentlichen Determinanten von Schulleitungsgesundheit wird vorgeschlagen. Empfehlungen f{\"u}r die Schulleitungspraxis umfassen die Reduzierung der Unterrichtsverpflichtung, die Erweiterung von Autonomie im sozial-interaktiven Bereich mit den Lehrern und die systematische Etablierung von Mitarbeitergespr{\"a}chen zur Ausgestaltung individueller F{\"u}hrungsbeziehungen zwischen Schulleitungen und Lehrern.}, language = {de} } @phdthesis{Risse2011, author = {Risse, Sarah}, title = {Processing in the perceptual span : investigations with the n+2-boundary paradigm}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-60414}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Cognitive psychology is traditionally interested in the interaction of perception, cognition, and behavioral control. Investigating eye movements in reading constitutes a field of research in which the processes and interactions of these subsystems can be studied in a well-defined environment. Thereby, the following questions are pursued: How much information is visually perceived during a fixation, how is processing achieved and temporally coordinated from visual letter encoding to final sentence comprehension, and how do such processes reflect on behavior such as the control of the eyes' movements during reading. Various theoretical models have been proposed to account for the specific eye-movement behavior in reading (for a review see Reichle, Rayner, \& Pollatsek, 2003). Some models are based on the idea of shifting attention serially from one word to the next within the sentence whereas others propose distributed attention allocating processing resources to more than one word at a time. As attention is assumed to drive word recognition processes one major difference between these models is that word processing must either occur in strict serial order, or that word processing is achieved in parallel. In spite of this crucial difference in the time course of word processing, both model classes perform well on explaining many of the benchmark effects in reading. In fact, there seems to be not much empirical evidence that challenges the models to a point at which their basic assumptions could be falsified. One issue often perceived as being decisive in the debate on serial and parallel word processing is how not-yet-fixated words to the right of fixation affect eye movements. Specifically, evidence is discussed as to what spatial extent such parafoveal words are previewed and how this influences current and subsequent word processing. Four experiments investigated parafoveal processing close to the spatial limits of the perceptual span. The present work aims to go beyond mere existence proofs of previewing words at such spatial distances. Introducing a manipulation that dissociates the sources of long-range preview effects, benefits and costs of parafoveal processing can be investigated in a single analysis and the differing impact is tracked across a three-word target region. In addition, the same manipulation evaluates the role of oculomotor error as the cause of non-local distributed effects. In this respect, the results contribute to a better understanding of the time course of word processing inside the perceptual span and attention allocation during reading.}, language = {en} } @phdthesis{Kristen2011, author = {Kristen, Juliane Ute}, title = {Amphiphilic BAB-triblock copolymers bearing fluorocarbon groups : synthesis and self-organization in aqueous media}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-61782}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {In this work new fluorinated and non-fluorinated mono- and bifunctional trithiocarbonates of the structure Z-C(=S)-S-R and Z-C(=S)-S-R-S-C(=S)-Z were synthesized for the use as chain transfer agents (CTAs) in the RAFT-process. All newly synthesized CTAs were tested for their efficiency to moderate the free radical polymerization process by polymerizing styrene (M3). Besides characterization of the homopolymers by GPC measurements, end- group analysis of the synthesized block copolymers via 1H-, 19F-NMR, and in some cases also UV-vis spectroscopy, were performed attaching suitable fluorinated moieties to the Z- and/or R-groups of the CTAs. Symmetric triblock copolymers of type BAB and non-symmetric fluorine end- capped polymers were accessible using the RAFT process in just two or one polymerization step. In particular, the RAFT-process enabled the controlled polymerization of hydrophilic monomers such as N-isopropylacrylamide (NIPAM) (M1) as well as N-acryloylpyrrolidine (NAP) (M2) for the A-blocks and of the hydrophobic monomers styrene (M3), 2-fluorostyrene (M4), 3-fluorostyrene (M5), 4-fluorostyrene (M6) and 2,3,4,5,6-pentafluorostyrene (M7) for the B-blocks. The properties of the BAB-triblock copolymers were investigated in dilute, concentrated and highly concentrated aqueous solutions using DLS, turbidimetry, 1H- and 19F-NMR, rheology, determination of the CMC, foam height- and surface tension measurements and microscopy. Furthermore, their ability to stabilize emulsions and microemulsions and the wetting behaviour of their aqueous solutions on different substrates was investigated. The behaviour of the fluorine end-functionalized polymers to form micelles was studied applying DLS measurements in diluted organic solution. All investigated BAB-triblock copolymers were able to form micelles and show surface activity at room temperature in dilute aqueous solution. The aqueous solutions displayed moderate foam formation. With different types and concentrations of oils, the formation of emulsions could be detected using a light microscope. A boosting effect in microemulsions could not be found adding BAB-triblock copolymers. At elevated polymer concentrations, the formation of hydrogels was proved applying rheology measurements.}, language = {en} } @phdthesis{Ivakov2011, author = {Ivakov, Alexander}, title = {Metabolic interactions in leaf development in Arabidopsis thaliana}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59730}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Das Wachstum und {\"U}berleben von Pflanzen basiert auf der Photosynthese in den Bl{\"a}ttern. Diese beinhaltet die Aufnahme von Kohlenstoffdioxid aus der Atmosph{\"a}re und das simultane Einfangen von Lichtenergie zur Bildung organischer Molek{\"u}le. Diese werden nach dem Eintritt in den Metabolismus in viele andere Komponenten umgewandelt, welche die Grundlage f{\"u}r die Zunahme der Biomasse bilden. Bl{\"a}tter sind Organe, die auf die Fixierung von Kohlenstoffdioxid spezialisiert sind. Die Funktionen der Bl{\"a}tter beinhalten vor allem die Optimierung und Feinregulierung vieler Prozesse, um eine effektive Nutzung von Ressourcen und eine maximale Photosynthese zu gew{\"a}hrleisten. Es ist bekannt, dass sich die Morphologie der Bl{\"a}tter den Wachstumsbedingungen der Pflanze anpasst und eine wichtige Rolle bei der Optimierung der Photosynthese spielt. Trotzdem ist die Regulation dieser Art der Anpassung bisher nicht verstanden. Die allgemeine Zielsetzung dieser vorliegenden Arbeit ist das Verst{\"a}ndnis wie das Wachstum und die Morphologie der Bl{\"a}tter im Modellorganismus Arabidopsis thaliana reguliert werden. Besondere Aufmerksamkeit wurde hierbei der M{\"o}glichkeit geschenkt, dass es interne metabolische Signale in der Pflanze geben k{\"o}nnte, die das Wachstum und die Entwicklung von Bl{\"a}ttern beeinflussen. Um diese Fragestellung zu untersuchen, muss das Wachstum und die Entwicklung von Bl{\"a}ttern oberhalb des Levels des einzelnen Organs und im Kontext der gesamten Pflanze betrachtet werden, weil Bl{\"a}tter nicht eigenst{\"a}ndig wachsen, sondern von Ressourcen und regulatorischen Einfl{\"u}ssen der ganzen Pflanze abh{\"a}ngig sind. Aufgrund der Komplexit{\"a}t dieser Fragestellung wurden drei komplement{\"a}re Ans{\"a}tze durchgef{\"u}hrt. Im ersten und spezifischsten Ansatz wurde untersucht ob eine flussabw{\"a}rts liegende Komponente des Zucker-Signalwegs, Trehalose-6-Phosphat (Tre-6-P), das Blattwachstum und die Blattentwicklung beinflussen kann. Um diese Frage zu beantworten wurden transgene Arabidopsis-Linien mit einem gest{\"o}rten Gehalt von Tre-6-P durch die Expression von bakteriellen Proteinen die in dem metabolismus von trehalose beteiligt sind. Die Pflanzen-Linien wurden unter Standard-Bendingungen in Erde angebaut und ihr Metabolismus und ihre Blattmorphologie untersucht. Diese Experimente f{\"u}hrten auch zu einem unerwarteten Projekt hinsichtlich einer m{\"o}glichen Rolle von Tre-6-P in der Regulation der Stomata. In einem zweiten, allgemeineren Ansatz wurde untersucht, ob {\"A}nderungen im Zucker-Gehalt der Pflanzen die Morphogenese der Bl{\"a}tter als Antwort auf Licht beeinflussen. Dazu wurden eine Reihe von Mutanten, die im Zentralmetabolismus beeintr{\"a}chtigt sind, in derselben Lichtbedingung angezogen und bez{\"u}glich ihrer Blattmorphologie analysiert. In einem dritten noch allgemeineren Ansatz wurde die nat{\"u}rliche Variation von morphologischen Auspr{\"a}gungen der Bl{\"a}tter und Rosette anhand von wilden Arabidopsis {\"O}kotypen untersucht, um zu verstehen wie sich die Blattmorphologie auf die Blattfunktion und das gesamte Pflanzenwachstum auswirkt und wie unterschiedliche Eigenschaften miteinander verkn{\"u}pft sind. Das Verh{\"a}ltnis der Blattanzahl zum Gesamtwachstum der Pflanze und Blattgr{\"o}ße wurde gesondert weiter untersucht durch eine Normalisierung der Blattanzahl auf das Frischgewicht der Rosette, um den Parameter „leafing Intensity" abzusch{\"a}tzen. Leafing Intensity integrierte Blattanzahl, Blattgr{\"o}ße und gesamtes Rosettenwachstum in einer Reihe von Kompromiss-Interaktionen, die in einem Wachstumsvorteil resultieren, wenn Pflanzen weniger, aber gr{\"o}ßere Bl{\"a}tter pro Einheit Biomasse ausbilden. Dies f{\"u}hrte zu einem theoretischen Ansatz in dem ein einfaches allometrisch mathematisches Modell konstruiert wurde, um Blattanzahl, Blattgr{\"o}ße und Pflanzenwachstum im Kontext der gesamten Pflanze Arabidopsis zu verkn{\"u}pfen.}, language = {en} } @phdthesis{Moesta2011, author = {M{\"o}sta, Philipp}, title = {Novel aspects of the dynamics of binary black-hole mergers}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59820}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {The inspiral and merger of two black holes is among the most exciting and extreme events in our universe. Being one of the loudest sources of gravitational waves, they provide a unique dynamical probe of strong-field general relativity and a fertile ground for the observation of fundamental physics. While the detection of gravitational waves alone will allow us to observe our universe through an entirely new window, combining the information obtained from both gravitational wave and electro-magnetic observations will allow us to gain even greater insight in some of the most exciting astrophysical phenomena. In addition, binary black-hole mergers serve as an intriguing tool to study the geometry of space-time itself. In this dissertation we study the merger process of binary black-holes in a variety of conditions. Our results show that asymmetries in the curvature distribution on the common apparent horizon are correlated to the linear momentum acquired by the merger remnant. We propose useful tools for the analysis of black holes in the dynamical and isolated horizon frameworks and shed light on how the final merger of apparent horizons proceeds after a common horizon has already formed. We connect mathematical theorems with data obtained from numerical simulations and provide a first glimpse on the behavior of these surfaces in situations not accessible to analytical tools. We study electro-magnetic counterparts of super-massive binary black-hole mergers with fully 3D general relativistic simulations of binary black-holes immersed both in a uniform magnetic field in vacuum and in a tenuous plasma. We find that while a direct detection of merger signatures with current electro-magnetic telescopes is unlikely, secondary emission, either by altering the accretion rate of the circumbinary disk or by synchrotron radiation from accelerated charges, may be detectable. We propose a novel approach to measure the electro-magnetic radiation in these simulations and find a non-collimated emission that dominates over the collimated one appearing in the form of dual jets associated with each of the black holes. Finally, we provide an optimized gravitational wave detection pipeline using phenomenological waveforms for signals from compact binary coalescence and show that by including spin effects in the waveform templates, the detection efficiency is drastically improved as well as the bias on recovered source parameters reduced. On the whole, this disseration provides evidence that a multi-messenger approach to binary black-hole merger observations provides an exciting prospect to understand these sources and, ultimately, our universe.}, language = {en} } @phdthesis{Seewald2011, author = {Seewald, Gunter}, title = {Lineare und nichtlineare optische Untersuchungen am synthetischen Eumelanin und Entwicklung eines Kaskadenmodells}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59967}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Eumelanin ist ein Fluorophor mit teilweise recht ungew{\"o}hnlichen spektralen Eigenschaften. Unter anderem konnten in fr{\"u}heren Ver{\"o}ffentlichungen Unterschiede zwischen dem 1- und 2-photonen-angeregtem Fluoreszenzspektrum beobachtet werden, weshalb im nichtlinearen Anregungsfall ein schrittweiser Anregungsprozess vermutet wurde. Um diese und weitere optische Eigenschaften des Eumelanins besser zu verstehen, wurden in der vorliegenden Arbeit vielf{\"a}ltige messmethodische Ans{\"a}tze der linearen und nichtlinearen Optik an synthetischem Eumelanin in 0,1M NaOH verfolgt. Aus den Ergebnissen wurde ein Modell abgeleitet, welches die beobachteten photonischen Eigenschaften konsistent beschreibt. In diesem kaskadierten Zustandsmodell (Kaskaden-Modell) wird die aufgenommene Photonenenergie schrittweise von Anregungszust{\"a}nden hoher {\"U}bergangsenergien zu Anregungszust{\"a}nden niedrigerer {\"U}bergangsenergien transferiert. Messungen der transienten Absorption ergaben dominante Anteile mit kurzen Lebensdauern im ps-Bereich und ließen damit auf eine hohe Relaxationsgeschwindigkeit entlang der Kaskade schließen. Durch Untersuchung der nichtlinear angeregten Fluoreszenz von verschieden großen Eumelanin-Aggregaten konnte gezeigt werden, dass Unterschiede zwischen dem linear und nichtlinear angeregten Fluoreszenzspektrum nicht nur durch einen schrittweisen Anregungsprozess bei nichtlinearer Anregung sondern auch durch Unterschiede in den Verh{\"a}ltnissen der Quantenausbeuten zwischen kleinen und großen Aggregaten beim Wechsel von linearer zu nichtlinearer Anregung begr{\"u}ndet sein k{\"o}nnen. Durch Bestimmung des Anregungswirkungsquerschnitts und der Anregungspulsdauer-Abh{\"a}ngigkeit der nichtlinear angeregten Fluoreszenz von Eumelanin konnte jedoch ein schrittweiser 2-Photonen-Anregungsprozess {\"u}ber einen Zwischenzustand mit Lebendsdauern im ps-Bereich nachgewiesen werden.}, language = {de} } @phdthesis{Smirnov2011, author = {Smirnov, Sergey}, title = {Business process model abstraction}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-60258}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Business process models are used within a range of organizational initiatives, where every stakeholder has a unique perspective on a process and demands the respective model. As a consequence, multiple process models capturing the very same business process coexist. Keeping such models in sync is a challenge within an ever changing business environment: once a process is changed, all its models have to be updated. Due to a large number of models and their complex relations, model maintenance becomes error-prone and expensive. Against this background, business process model abstraction emerged as an operation reducing the number of stored process models and facilitating model management. Business process model abstraction is an operation preserving essential process properties and leaving out insignificant details in order to retain information relevant for a particular purpose. Process model abstraction has been addressed by several researchers. The focus of their studies has been on particular use cases and model transformations supporting these use cases. This thesis systematically approaches the problem of business process model abstraction shaping the outcome into a framework. We investigate the current industry demand in abstraction summarizing it in a catalog of business process model abstraction use cases. The thesis focuses on one prominent use case where the user demands a model with coarse-grained activities and overall process ordering constraints. We develop model transformations that support this use case starting with the transformations based on process model structure analysis. Further, abstraction methods considering the semantics of process model elements are investigated. First, we suggest how semantically related activities can be discovered in process models-a barely researched challenge. The thesis validates the designed abstraction methods against sets of industrial process models and discusses the method implementation aspects. Second, we develop a novel model transformation, which combined with the related activity discovery allows flexible non-hierarchical abstraction. In this way this thesis advocates novel model transformations that facilitate business process model management and provides the foundations for innovative tool support.}, language = {en} } @phdthesis{FloresSuarez2011, author = {Flores Su{\´a}rez, Rosaura}, title = {Three-dimensional polarization probing in polymer ferroelectrics, polymer-dispersed liquid crystals, and polymer ferroelectrets}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-60173}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {A key non-destructive technique for analysis, optimization and developing of new functional materials such as sensors, transducers, electro-optical and memory devices is presented. The Thermal-Pulse Tomography (TPT) provides high-resolution three-dimensional images of electric field and polarization distribution in a material. This thermal technique use a pulsed heating by means of focused laser light which is absorbed by opaque electrodes. The diffusion of the heat causes changes in the sample geometry, generating a short-circuit current or change in surface potential, which contains information about the spatial distribution of electric dipoles or space charges. Afterwards, a reconstruction of the internal electric field and polarization distribution in the material is possible via Scale Transformation or Regularization methods. In this way, the TPT was used for the first time to image the inhomogeneous ferroelectric switching in polymer ferroelectric films (candidates to memory devices). The results shows the typical pinning of electric dipoles in the ferroelectric polymer under study and support the previous hypotheses of a ferroelectric reversal at a grain level via nucleation and growth. In order to obtain more information about the impact of the lateral and depth resolution of the thermal techniques, the TPT and its counterpart called Focused Laser Intensity Modulation Method (FLIMM) were implemented in ferroelectric films with grid-shaped electrodes. The results from both techniques, after the data analysis with different regularization and scale methods, are in total agreement. It was also revealed a possible overestimated lateral resolution of the FLIMM and highlights the TPT method as the most efficient and reliable thermal technique. After an improvement in the optics, the Thermal-Pulse Tomography method was implemented in polymer-dispersed liquid crystals (PDLCs) films, which are used in electro-optical applications. The results indicated a possible electrostatic interaction between the COH group in the liquid crystals and the fluorinate atoms of the used ferroelectric matrix. The geometrical parameters of the LC droplets were partially reproduced as they were compared with Scanning Electron Microscopy (SEM) images. For further applications, it is suggested the use of a non-strong-ferroelectric polymer matrix. In an effort to develop new polymerferroelectrets and for optimizing their properties, new multilayer systems were inspected. The results of the TPT method showed the non-uniformity of the internal electric-field distribution in the shaped-macrodipoles and thus suggested the instability of the sample. Further investigation on multilayers ferroelectrets was suggested and the implementation of less conductive polymers layers too.}, language = {en} } @phdthesis{Muehlbauer2011, author = {M{\"u}hlbauer, Felix}, title = {Entwurf, Methoden und Werkzeuge f{\"u}r komplexe Bildverarbeitungssysteme auf Rekonfigurierbaren System-on-Chip-Architekturen}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59923}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Bildverarbeitungsanwendungen stellen besondere Anspr{\"u}che an das ausf{\"u}hrende Rechensystem. Einerseits ist eine hohe Rechenleistung erforderlich. Andererseits ist eine hohe Flexibilit{\"a}t von Vorteil, da die Entwicklung tendentiell ein experimenteller und interaktiver Prozess ist. F{\"u}r neue Anwendungen tendieren Entwickler dazu, eine Rechenarchitektur zu w{\"a}hlen, die sie gut kennen, anstatt eine Architektur einzusetzen, die am besten zur Anwendung passt. Bildverarbeitungsalgorithmen sind inh{\"a}rent parallel, doch herk{\"o}mmliche bildverarbeitende eingebettete Systeme basieren meist auf sequentiell arbeitenden Prozessoren. Im Gegensatz zu dieser "Unstimmigkeit" k{\"o}nnen hocheffiziente Systeme aus einer gezielten Synergie aus Software- und Hardwarekomponenten aufgebaut werden. Die Konstruktion solcher System ist jedoch komplex und viele L{\"o}sungen, wie zum Beispiel grobgranulare Architekturen oder anwendungsspezifische Programmiersprachen, sind oft zu akademisch f{\"u}r einen Einsatz in der Wirtschaft. Die vorliegende Arbeit soll ein Beitrag dazu leisten, die Komplexit{\"a}t von Hardware-Software-Systemen zu reduzieren und damit die Entwicklung hochperformanter on-Chip-Systeme im Bereich Bildverarbeitung zu vereinfachen und wirtschaftlicher zu machen. Dabei wurde Wert darauf gelegt, den Aufwand f{\"u}r Einarbeitung, Entwicklung als auch Erweiterungen gering zu halten. Es wurde ein Entwurfsfluss konzipiert und umgesetzt, welcher es dem Softwareentwickler erm{\"o}glicht, Berechnungen durch Hardwarekomponenten zu beschleunigen und das zu Grunde liegende eingebettete System komplett zu prototypisieren. Hierbei werden komplexe Bildverarbeitungsanwendungen betrachtet, welche ein Betriebssystem erfordern, wie zum Beispiel verteilte Kamerasensornetzwerke. Die eingesetzte Software basiert auf Linux und der Bildverarbeitungsbibliothek OpenCV. Die Verteilung der Berechnungen auf Software- und Hardwarekomponenten und die daraus resultierende Ablaufplanung und Generierung der Rechenarchitektur erfolgt automatisch. Mittels einer auf der Antwortmengenprogrammierung basierten Entwurfsraumexploration ergeben sich Vorteile bei der Modellierung und Erweiterung. Die Systemsoftware wird mit OpenEmbedded/Bitbake synthetisiert und die erzeugten on-Chip-Architekturen auf FPGAs realisiert.}, language = {de} } @phdthesis{Thiele2011, author = {Thiele, Sven}, title = {Modeling biological systems with Answer Set Programming}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59383}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Biology has made great progress in identifying and measuring the building blocks of life. The availability of high-throughput methods in molecular biology has dramatically accelerated the growth of biological knowledge for various organisms. The advancements in genomic, proteomic and metabolomic technologies allow for constructing complex models of biological systems. An increasing number of biological repositories is available on the web, incorporating thousands of biochemical reactions and genetic regulations. Systems Biology is a recent research trend in life science, which fosters a systemic view on biology. In Systems Biology one is interested in integrating the knowledge from all these different sources into models that capture the interaction of these entities. By studying these models one wants to understand the emerging properties of the whole system, such as robustness. However, both measurements as well as biological networks are prone to considerable incompleteness, heterogeneity and mutual inconsistency, which makes it highly non-trivial to draw biologically meaningful conclusions in an automated way. Therefore, we want to promote Answer Set Programming (ASP) as a tool for discrete modeling in Systems Biology. ASP is a declarative problem solving paradigm, in which a problem is encoded as a logic program such that its answer sets represent solutions to the problem. ASP has intrinsic features to cope with incompleteness, offers a rich modeling language and highly efficient solving technology. We present ASP solutions, for the analysis of genetic regulatory networks, determining consistency with observed measurements and identifying minimal causes for inconsistency. We extend this approach for computing minimal repairs on model and data that restore consistency. This method allows for predicting unobserved data even in case of inconsistency. Further, we present an ASP approach to metabolic network expansion. This approach exploits the easy characterization of reachability in ASP and its various reasoning methods, to explore the biosynthetic capabilities of metabolic reaction networks and generate hypotheses for extending the network. Finally, we present the BioASP library, a Python library which encapsulates our ASP solutions into the imperative programming paradigm. The library allows for an easy integration of ASP solution into system rich environments, as they exist in Systems Biology.}, language = {en} } @phdthesis{Wist2011, author = {Wist, Dominic}, title = {Attacking complexity in logic synthesis of asynchronous circuits}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59706}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Most of the microelectronic circuits fabricated today are synchronous, i.e. they are driven by one or several clock signals. Synchronous circuit design faces several fundamental challenges such as high-speed clock distribution, integration of multiple cores operating at different clock rates, reduction of power consumption and dealing with voltage, temperature, manufacturing and runtime variations. Asynchronous or clockless design plays a key role in alleviating these challenges, however the design and test of asynchronous circuits is much more difficult in comparison to their synchronous counterparts. A driving force for a widespread use of asynchronous technology is the availability of mature EDA (Electronic Design Automation) tools which provide an entire automated design flow starting from an HDL (Hardware Description Language) specification yielding the final circuit layout. Even though there was much progress in developing such EDA tools for asynchronous circuit design during the last two decades, the maturity level as well as the acceptance of them is still not comparable with tools for synchronous circuit design. In particular, logic synthesis (which implies the application of Boolean minimisation techniques) for the entire system's control path can significantly improve the efficiency of the resulting asynchronous implementation, e.g. in terms of chip area and performance. However, logic synthesis, in particular for asynchronous circuits, suffers from complexity problems. Signal Transitions Graphs (STGs) are labelled Petri nets which are a widely used to specify the interface behaviour of speed independent (SI) circuits - a robust subclass of asynchronous circuits. STG decomposition is a promising approach to tackle complexity problems like state space explosion in logic synthesis of SI circuits. The (structural) decomposition of STGs is guided by a partition of the output signals and generates a usually much smaller component STG for each partition member, i.e. a component STG with a much smaller state space than the initial specification. However, decomposition can result in component STGs that in isolation have so-called irreducible CSC conflicts (i.e. these components are not SI synthesisable anymore) even if the specification has none of them. A new approach is presented to avoid such conflicts by introducing internal communication between the components. So far, STG decompositions are guided by the finest output partitions, i.e. one output per component. However, this might not yield optimal circuit implementations. Efficient heuristics are presented to determine coarser partitions leading to improved circuits in terms of chip area. For the new algorithms correctness proofs are given and their implementations are incorporated into the decomposition tool DESIJ. The presented techniques are successfully applied to some benchmarks - including 'real-life' specifications arising in the context of control resynthesis - which delivered promising results.}, language = {en} } @phdthesis{Hanisch2011, author = {Hanisch, Florian}, title = {Variational problems on supermanifolds}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59757}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {In this thesis, we discuss the formulation of variational problems on supermanifolds. Supermanifolds incorporate bosonic as well as fermionic degrees of freedom. Fermionic fields take values in the odd part of an appropriate Grassmann algebra and are thus showing an anticommutative behaviour. However, a systematic treatment of these Grassmann parameters requires a description of spaces as functors, e.g. from the category of Grassmann algberas into the category of sets (or topological spaces, manifolds). After an introduction to the general ideas of this approach, we use it to give a description of the resulting supermanifolds of fields/maps. We show that each map is uniquely characterized by a family of differential operators of appropriate order. Moreover, we demonstrate that each of this maps is uniquely characterized by its component fields, i.e. by the coefficients in a Taylor expansion w.r.t. the odd coordinates. In general, the component fields are only locally defined. We present a way how to circumvent this limitation. In fact, by enlarging the supermanifold in question, we show that it is possible to work with globally defined components. We eventually use this formalism to study variational problems. More precisely, we study a super version of the geodesic and a generalization of harmonic maps to supermanifolds. Equations of motion are derived from an energy functional and we show how to decompose them into components. Finally, in special cases, we can prove the existence of critical points by reducing the problem to equations from ordinary geometric analysis. After solving these component equations, it is possible to show that their solutions give rise to critical points in the functor spaces of fields.}, language = {en} } @phdthesis{Federico2011, author = {Federico, Stefania}, title = {Synthetic peptides derived from decorin as building blocks for biomaterials based on supramolecular interactions}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59661}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {In this work, the development of a new molecular building block, based on synthetic peptides derived from decorin, is presented. These peptides represent a promising basis for the design of polymer-based biomaterials that mimic the ECM on a molecular level and exploit specific biological recognition for technical applications. Multiple sequence alignments of the internal repeats of decorin that formed the inner and outer surface of the arch-shaped protein were used to develop consensus sequences. These sequences contained conserved sequence motifs that are likely to be related to structural and functional features of the protein. Peptides representative for the consensus sequences were synthesized by microwave-assisted solid phase peptide synthesis and purified by RP-HPLC, with purities higher than 95 mol\%. After confirming the desired masses by MALDI-TOF-MS, the primary structure of each peptide was investigated by 1H and 2D NMR, from which a full assignment of the chemical shifts was obtained. The characterization of the peptides conformation in solution was performed by CD spectroscopy, which demonstrated that using TFE, the peptides from the outer surface of decorin show a high propensity to fold into helical structures as observed in the original protein. To the contrary, the peptides from the inner surface did not show propensity to form stable secondary structure. The investigation of the binding capability of the peptides to Collagen I was performed by surface plasmon resonance analyses, from which all but one of the peptides representing the inner surface of decorin showed binding affinity to collagen with values of dissociation constant between 2•10-7 M and 2.3•10-4 M. On the other hand, the peptides representative for the outer surface of decorin did not show any significant interaction to collagen. This information was then used to develop experimental demonstration for the binding capabilities of the peptides from the inner surface of decorin to collagen even when used in more complicated situations close to possible appications. With this purpose, the peptide (LRELHLNNN) which showed the highest binding affinity to collagen (2•10-7 M) was functionalized with an N-terminal triple bond in order to obtain a peptide dimer via copper(I)-catalyzed cycloaddition reaction with 4,4'-diazidostilbene-2,2'-disulfonic acid. Rheological measurements showed that the presence of the peptide dimer was able to enhance the elastic modulus (G') of a collagen gel from ~ 600 Pa (collagen alone) to ~ 2700 Pa (collagen and peptide dimer). Moreover, it was shown that the mechanical properties of a collagen gel can be tailored by using different molar ratios of peptide dimer respect to collagen. The same peptide, functionalized with the triple bond, was used to obtain a peptide-dye conjugate by coupling it with N-(5'-azidopentanoyl)-5-aminofluorescein. An aqueous solution (5 vol\% methanol) of the peptide dye conjugate was injected into a collagen and a hyaluronic acid (HA) gel and images of fluorescence detection showed that the diffusion of the peptide was slower in the collagen gel compared to the HA gel. The third experimental demonstration was gained using the peptide (LSELRLHNN) which showed the lower binding affinity (2.3•10-4 M) to collagen. This peptide was grafted to hyaluronic acid via EDC-chemistry, with a degree of functionalization of 7 ± 2 mol\% as calculated by 1H-NMR. The grafting was further confirmed by FTIR and TGA measurements, which showed that the onset of decomposition for the HA-g-peptide decreased by 10 °C compared to the native HA. Rheological measurements showed that the elastic modulus of a system based on collagen and HA-g-peptide increased by almost two order of magnitude (G' = 200 Pa) compared to a system based on collagen and HA (G' = 0.9 Pa). Overall, this study showed that the synthetic peptides, which were identified from decorin, can be applied as potential building blocks for biomimetic materials that function via biological recognition.}, language = {en} } @phdthesis{Kellermann2011, author = {Kellermann, Thorsten}, title = {Accurate numerical relativity simulations of non-vacuumspace-times in two dimensions and applications to critical collapse}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59578}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {This Thesis puts its focus on the physics of neutron stars and its description with methods of numerical relativity. In the first step, a new numerical framework the Whisky2D code will be developed, which solves the relativistic equations of hydrodynamics in axisymmetry. Therefore we consider an improved formulation of the conserved form of these equations. The second part will use the new code to investigate the critical behaviour of two colliding neutron stars. Considering the analogy to phase transitions in statistical physics, we will investigate the evolution of the entropy of the neutron stars during the whole process. A better understanding of the evolution of thermodynamical quantities, like the entropy in critical process, should provide deeper understanding of thermodynamics in relativity. More specifically, we have written the Whisky2D code, which solves the general-relativistic hydrodynamics equations in a flux-conservative form and in cylindrical coordinates. This of course brings in 1/r singular terms, where r is the radial cylindrical coordinate, which must be dealt with appropriately. In the above-referenced works, the flux operator is expanded and the 1/r terms, not containing derivatives, are moved to the right-hand-side of the equation (the source term), so that the left hand side assumes a form identical to the one of the three-dimensional (3D) Cartesian formulation. We call this the standard formulation. Another possibility is not to split the flux operator and to redefine the conserved variables, via a multiplication by r. We call this the new formulation. The new equations are solved with the same methods as in the Cartesian case. From a mathematical point of view, one would not expect differences between the two ways of writing the differential operator, but, of course, a difference is present at the numerical level. Our tests show that the new formulation yields results with a global truncation error which is one or more orders of magnitude smaller than those of alternative and commonly used formulations. The second part of the Thesis uses the new code for investigations of critical phenomena in general relativity. In particular, we consider the head-on-collision of two neutron stars in a region of the parameter space where two final states a new stable neutron star or a black hole, lay close to each other. In 1993, Choptuik considered one-parameter families of solutions, S[P], of the Einstein-Klein-Gordon equations for a massless scalar field in spherical symmetry, such that for every P > P⋆, S[P] contains a black hole and for every P < P⋆, S[P] is a solution not containing singularities. He studied numerically the behavior of S[P] as P → P⋆ and found that the critical solution, S[P⋆], is universal, in the sense that it is approached by all nearly-critical solutions regardless of the particular family of initial data considered. All these phenomena have the common property that, as P approaches P⋆, S[P] approaches a universal solution S[P⋆] and that all the physical quantities of S[P] depend only on |P - P⋆|. The first study of critical phenomena concerning the head-on collision of NSs was carried out by Jin and Suen in 2007. In particular, they considered a series of families of equal-mass NSs, modeled with an ideal-gas EOS, boosted towards each other and varied the mass of the stars, their separation, velocity and the polytropic index in the EOS. In this way they could observe a critical phenomenon of type I near the threshold of black-hole formation, with the putative solution being a nonlinearly oscillating star. In a successive work, they performed similar simulations but considering the head-on collision of Gaussian distributions of matter. Also in this case they found the appearance of type-I critical behaviour, but also performed a perturbative analysis of the initial distributions of matter and of the merged object. Because of the considerable difference found in the eigenfrequencies in the two cases, they concluded that the critical solution does not represent a system near equilibrium and in particular not a perturbed Tolmann-Oppenheimer-Volkoff (TOV) solution. In this Thesis we study the dynamics of the head-on collision of two equal-mass NSs using a setup which is as similar as possible to the one considered above. While we confirm that the merged object exhibits a type-I critical behaviour, we also argue against the conclusion that the critical solution cannot be described in terms of equilibrium solution. Indeed, we show that, in analogy with what is found in, the critical solution is effectively a perturbed unstable solution of the TOV equations. Our analysis also considers fine-structure of the scaling relation of type-I critical phenomena and we show that it exhibits oscillations in a similar way to the one studied in the context of scalar-field critical collapse.}, language = {en} } @phdthesis{Menzel2011, author = {Menzel, Michael}, title = {Model-driven security in service-oriented architectures : leveraging security patterns to transform high-level security requirements to technical policies}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59058}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Service-oriented Architectures (SOA) facilitate the provision and orchestration of business services to enable a faster adoption to changing business demands. Web Services provide a technical foundation to implement this paradigm on the basis of XML-messaging. However, the enhanced flexibility of message-based systems comes along with new threats and risks. To face these issues, a variety of security mechanisms and approaches is supported by the Web Service specifications. The usage of these security mechanisms and protocols is configured by stating security requirements in security policies. However, security policy languages for SOA are complex and difficult to create due to the expressiveness of these languages. To facilitate and simplify the creation of security policies, this thesis presents a model-driven approach that enables the generation of complex security policies on the basis of simple security intentions. SOA architects can specify these intentions in system design models and are not required to deal with complex technical security concepts. The approach introduced in this thesis enables the enhancement of any system design modelling languages - for example FMC or BPMN - with security modelling elements. The syntax, semantics, and notion of these elements is defined by our security modelling language SecureSOA. The metamodel of this language provides extension points to enable the integration into system design modelling languages. In particular, this thesis demonstrates the enhancement of FMC block diagrams with SecureSOA. To enable the model-driven generation of security policies, a domain-independent policy model is introduced in this thesis. This model provides an abstraction layer for security policies. Mappings are used to perform the transformation from our model to security policy languages. However, expert knowledge is required to generate instances of this model on the basis of simple security intentions. Appropriate security mechanisms, protocols and options must be chosen and combined to fulfil these security intentions. In this thesis, a formalised system of security patterns is used to represent this knowledge and to enable an automated transformation process. Moreover, a domain-specific language is introduced to state security patterns in an accessible way. On the basis of this language, a system of security configuration patterns is provided to transform security intentions related to data protection and identity management. The formal semantics of the security pattern language enable the verification of the transformation process introduced in this thesis and prove the correctness of the pattern application. Finally, our SOA Security LAB is presented that demonstrates the application of our model-driven approach to facilitate a dynamic creation, configuration, and execution of secure Web Service-based composed applications.}, language = {en} } @phdthesis{Doering2011, author = {D{\"o}ring, Sebastian}, title = {Oberfl{\"a}chengitter in azobenzenhaltigen Schichten f{\"u}r organische DFB-Laser}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59211}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Ein neuentwickeltes azobenzenhaltiges Material, das auf einem supramolekularen Konzept basiert, wird bez{\"u}glich seiner Strukturbildung w{\"a}hrend einer holografischen Belichtung bei 488 nm untersucht. Im Mittelpunkt stehen dabei eindimensionale, sinusf{\"o}rmige Reliefs mit Periodizit{\"a}ten kleiner 500 nm. Es wird gezeigt, wie der Grad der Vernetzung der photosensitiven Schicht die Strukturbildung in diesem Gr{\"o}ßenbereich beeinflusst. Zur Maximierung der Strukturtiefe werden gezielt Prozessparameter der Belichtung sowie Materialparameter variiert. Unter Standardbedingungen und moderaten Belichtungsintensit{\"a}ten von ca. 200 mW/cm² bilden sich innerhalb weniger Minuten bei einer Periode von 400 nm Strukturtiefen von bis zu 80nm aus. Durch die Beeinflussung von Materialparametern, wie Oberfl{\"a}chenspannung und Viskosit{\"a}t, wird die maximale Strukturtiefe auf 160nm verdoppelt. Durch Mehrfachbelichtungen wird auch die Bildung von zweidimensionalen Gittern untersucht. Die Originalstrukturen werden in einem Abformverfahren kopiert und in Schichten von unter UV-Licht aush{\"a}rtenden Polymeren {\"u}bertragen. Durch das Abformen kommt es zu einer geringf{\"u}gigen Verschlechterung der Oberfl{\"a}chenqualit{\"a}t sowie Abnahme der Strukturtiefe. Dieser Verlust wird durch eine Verringerung der Prozesstemperatur verringert. Mithilfe kopierter Oberfl{\"a}chengitter werden organische Distributed Feedback-(DFB)-Laser zweiter Ordnung hergestellt, um den Einfluss von Gitterparametern auf die Emissionseigenschaften dieser Laser zu untersuchen. Dazu erfolgt zun{\"a}chst die Charakterisierung der optischen Verst{\"a}rkungseigenschaften ausgew{\"a}hlter organischer Emittermaterialien mittels der Variablen Strichl{\"a}ngenmethode. Das mit dem Laserfarbstoff Pyrromthen567 (PM567) dotierte Polystyrol (PS) zeigt dabei trotz konzentrationsbedingter geringer Absorption eine vergleichsweise geringe Gewinnschwelle von 50µJ/cm² bei ca. 575 nm. Das aktive Gast-Wirt-System der konjugierten Polymere MEH-PPV und F8BT* weist eine hohe Absorption und eine kleine Gewinnschwelle von 2,5 µJ/cm² bei 630 nm auf. Dieses Verhalten spiegelt sich auch in den Emissionseigenschaften der damit hergestellten DFB-Laser wieder. Die Dicke der aktiven Schichten liegen im Bereich hunderter Nanometer und wird so eingestellt, dass sich nur die transversalen Grundmoden im Wellenleiter ausbreiten k{\"o}nnen. Die Gitterperiode sind so gew{\"a}hlt, dass ein Lichtmode im Verst{\"a}rkungsbereich des Emittermaterials liegt. Die Emissionslinien der Laser sind mit FWHM-Werten von bis zu 0,3 nm spektral sehr schmalbandig und weisen auf eine sehr gute Gitterqualit{\"a}t hin. Die Untersuchungen liefern minimale Laserschwellen und maximale differentielle Effizienzen von 4,0µJ/cm² und 8,4\% f{\"u}r MEH-PPV in F8BT* (bei ca. 640nm) sowie 80 µJ/cm² und 0,9\% f{\"u}r PM567 in PS (bei ca. 575 nm). Die Vergr{\"o}ßerung der Strukturtiefe von 40nm auf 80nm in mit MEH-PPV dotierten F8BT*-Lasern zu einem deutlichen Anstieg der ausgekoppelten Energie sowie der differentiellen Effizienz und einem geringen Absinken der Laserschwelle. Dies ist ein Resultat der erh{\"o}hten Kopplung von Lasermode und Gitter. Die Emission von DFB-Lasern mit zweidimensionalen Oberfl{\"a}chengittern zeigen eine Verringerung der Divergenz aber kein Einfluss auf die Laserschwelle. Abschließend erfolgt eine Vermessung der Photostabilit{\"a}t von DFB-Lasern unter verschiedenen Bedingungen. Das Einbringen eines konjugierten Polymers in eine aktive Matrix sowie der Betrieb in einer Stickstoffatmosph{\"a}re f{\"u}hren dabei zu einer Erh{\"o}hung der Lebensdauer auf {\"u}ber eine Million Pulse. Durch die Kombination von Oberfl{\"a}chengittern in PDMS-Filmen mit elektroaktiven Substraten wird eine elektrisch steuerbare Deformation des Beugungsgitters erreicht und auf einen DFB-Laser {\"u}bertragen. Die spannungsinduzierte Verformung wird zun{\"a}chst in Beugungsexperimenten charakterisiert und ein optimaler Arbeitspunkt bestimmt. Mit den beiden Elastomeren SEBS12 und VHB4910 werden in den Gittern maximale Perioden{\"a}nderungen von 1,3\% bzw. 3,4\% bei einer Steuerspannung von 2 kV erreicht. Der Unterschied resultiert aus den verschiedenen Elastizit{\"a}tsmoduln der Materialien. {\"U}bertragen auf DFB-Laser resultiert eine Variation der Gitterperiode senkrecht zu den Gitterlinien in einer kontinuierlichen Verschiebung der Emissionswellenl{\"a}nge. Mit einem Spannungssignal von 3,25 kV wird die schmalbandige Emission eines elastischen DFB-Lasers kontinuierlich um fast 50nm von 604 nm zu 557 nm hin verschoben. Aus dem Deformationsverhalten sowohl der reinen Beugungsgitter als auch der Laser werden R{\"u}ckschl{\"u}sse auf die Elastizit{\"a}t der verwendeten Materialien gezogen und erlauben Verbesserungen der Bauteile.}, language = {de} } @phdthesis{Krey2011, author = {Krey, Olaf}, title = {Zur Rolle der Mathematik in der Physik : Wissenschaftstheoretische Aspekte und Vorstellungen Physiklernender}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59412}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Mathematik spielt im Physikunterricht eine nicht unerhebliche Rolle - wenn auch eine zwiesp{\"a}ltige. Oft wird sie sogar zum Hindernis beim Lernen von Physik und kann ihr emanzipatorisches Potenzial nicht entfalten. Die vorliegende Arbeit stellt zwei Bausteine f{\"u}r eine begr{\"u}ndete Konzeption zum Umgang mit Mathematik beim Lernen von Physik zur Verf{\"u}gung. Im Theorieteil der Arbeit werden zum Einen wissenschaftstheoretische Aspekte der Rolle der Mathematik in der Physik aufgearbeitet und der physikdidaktischen Forschungsgemeinschaft im Zusammenhang zug{\"a}nglich gemacht. Zum anderen werden Forschungsergebnisse zu Vorstellungen Lernender {\"u}ber Physik und Mathematik sowie im Bereich der Epistemologie zusammengestellt. Im empirischen Teil der Arbeit werden Vorstellungen zur Rolle der Mathematik in der Physik von Sch{\"u}lerinnen und Sch{\"u}lern der Klassenstufen 10 und 12 sowie Physik-Lehramtstudierenden im Grundstudium mit Hilfe eines Fragebogens erhoben und unter Verwendung inhaltsanalytischer bzw. statistischer Methoden ausgewertet. Die Ergebnisse zeigen unter Anderem, dass Mathematik im Physikunterricht entgegen g{\"a}ngiger Meinungen bei den Lernenden nicht negativ, aber zumindest bei j{\"u}ngeren Lernenden formal und algorithmisch konnotiert ist.}, language = {de} } @phdthesis{Riedel2011, author = {Riedel, Katja}, title = {Elucidation of the epithelial sodium channel as a salt taste receptor candidate and search for novel salt taste receptor candidates}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-58764}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Salty taste has evolved to maintain electrolyte homeostasis, serving as a detector for salt containing food. In rodents, salty taste involves at least two transduction mechanisms. One is sensitive to the drug amiloride and specific for Na+, involving epithelial sodium channel (ENaC). A second rodent transduction pathway, which is triggered by various cations, is amiloride insensitive and not almost understood to date. Studies in primates showed amiloride-sensitive as well as amiloride-insensitive gustatory responses to NaCl, implying a role of both salt taste transduction pathways in humans. However, sensory studies in humans point to largely amiloride-insensitive sodium taste perception. An involvement of ENaC in human sodium taste perception was not shown, so far. In this study, ENaC subunit protein and mRNA could be localized to human taste bud cells (TBC). Thus, basolateral αβγ-ENaC ion channels are likely in TBC of circumvallate papillae, possibly mediating basolateral sodium entry. Similarly, basolateral βγ-ENaC might play a role in fungiform TBC. Strikingly, δ-ENaC subunit was confined to taste bud pores of both papillae, likely mediating gustatory sodium entry in TBC, either apical or paracellular via tight junctions. However, regional separation of δ-ENaC and βγ-ENaC in fungiform and circumvallate TBC indicate the presence of unknown interaction partner necessary to assemble into functional ion channels. However, screening of a macaque taste tissue cDNA library did neither reveal polypeptides assembling into a functional cation channel by interaction with δ-ENaC or βγ-ENaC nor ENaC independent salt taste receptor candidates. Thus, ENaC subunits are likely involved in human taste transduction, while exact composition and identity of an amiloride (in)sensitive salt taste receptors remain unclear. Localization of δ-ENaC in human taste pores strongly suggests a role in human taste transduction. In contrast, δ-ENaC is classified as pseudogene Scnn1d in mouse. However, no experimental detected sequences are annotated, while evidences for parts of Scnn1d derived mRNAs exist. In order to elucidate if Scnn1d is possibly involved in rodent salt taste perception, Scnn1d was evaluated in this study to clarify if Scnn1d is a gene or a transcribed pseudogene in mice. Comparative mapping of human SCNN1D to mouse chromosome 4 revealed complete Scnn1d sequence as well as its pseudogenization by Mus specific endogenous retroviruses. Moreover, tissue specific transcription of unitary Scnn1d pseudogene was found in mouse vallate papillae, kidney and testis and led to identification of nine Scnn1d transcripts. In vitro translation experiments showed that Scnn1d transcripts are coding competent for short polypeptides, possibly present in vivo. However, no sodium channel like function or sodium channel modulating activity was evident for Scnn1d transcripts and/or derived polypeptides. Thus, an involvement of mouse δ-ENaC in sodium taste transduction is unlikely and points to species specific differences in salt taste transduction mechanisms.}, language = {en} } @phdthesis{Lauterbach2011, author = {Lauterbach, Stefan}, title = {Lateglacial to Holocene climatic and environmental changes in Europe : multi-proxy studies on lake sediments along a transect from northern Italy to northeastern Poland}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-58157}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Sediment records of three European lakes were investigated in order to reconstruct the regional climate development during the Lateglacial and Holocene, to investigate the response of local ecosystems to climatic fluctuations and human impact and to relate regional peculiarities of past climate development to climatic changes on a larger spatial scale. The Lake Hańcza (NE Poland) sediment record was studied with a focus on reconstructing the early Holocene climate development and identifying possible differences to Western Europe. Following the initial Holocene climatic improvement, a further climatic improvement occurred between 10 000 and 9000 cal. a BP. Apparently, relatively cold and dry climate conditions persisted in NE Poland during the first ca. 1500 years of the Holocene, most likely due to a specific regional atmospheric circulation pattern. Prevailing anticyclonic circulation linked to a high-pressure cell above the remaining Scandinavian Ice Sheet (SIS) might have blocked the eastward propagation of warm and moist Westerlies and thus attenuated the early Holocene climatic amelioration in this region until the final decay of the SIS, a pattern different from climate development in Western Europe. The Lateglacial sediment record of Lake Mondsee (Upper Austria) was investigated in order to study the regional climate development and the environmental response to rapid climatic fluctuations. While the temperature rise and environmental response at the onset of the Holocene took place quasi-synchronously, major leads and lags in proxy responses characterize the onset of the Lateglacial Interstadial. In particular, the spread of coniferous woodlands and the reduction of detrital flux lagged the initial Lateglacial warming by ca. 500-750 years. Major cooling at the onset of the Younger Dryas took place synchronously with a change in vegetation, while the increase of detrital matter flux was delayed by about 150-300 years. Complex proxy responses are also detected for short-term Lateglacial climatic fluctuations. In summary, periods of abrupt climatic changes are characterized by complex and temporally variable proxy responses, mainly controlled by ecosystem inertia and the environmental preconditions. A second study on the Lake Mondsee sediment record focused on two small-scale climate deteriorations around 8200 and 9100 cal. a BP, which have been triggered by freshwater discharges to the North Atlantic, causing a shutdown of the Atlantic meridional overturning circulation (MOC). Combining microscopic varve counting and AMS 14C dating yielded a precise duration estimate (ca. 150 years) and absolute dating of the 8.2 ka cold event, both being in good agreement with results from other palaeoclimate records. Moreover, a sudden temperature overshoot after the 8.2 ka cold event was identified, also seen in other proxy records around the North Atlantic. This was most likely caused by enhanced resumption of the MOC, which also initiated substantial shifts of oceanic and atmospheric front systems. Although there is also evidence from other proxy records for pronounced recovery of the MOC and atmospheric circulation changes after the 9.1 ka cold event, no temperature overshoot is seen in the Lake Mondsee record, indicating the complex behaviour of the global climate system. The Holocene sediment record of Lake Iseo (northern Italy) was studied to shed light on regional earthquake activity and the influence of climate variability and anthropogenic impact on catchment erosion and detrital flux into the lake. Frequent small-scale detrital layers within the sediments reflect allochthonous sediment supply by extreme surface runoff events. During the early to mid-Holocene, increased detrital flux coincides with periods of cold and wet climate conditions, thus apparently being mainly controlled by climate variability. In contrast, intervals of high detrital flux during the late Holocene partly also correlate with phases of increased human impact, reflecting the complex influences on catchment erosion processes. Five large-scale event layers within the sediments, which are composed of mass-wasting deposits and turbidites, are supposed to have been triggered by strong local earthquakes. While the uppermost of these event layers is assigned to a documented adjacent earthquake in AD 1222, the four other layers are supposed to be related to previously undocumented prehistorical earthquakes.}, language = {en} } @phdthesis{Hoehne2011, author = {H{\"o}hne, Janet}, title = {Aktivit{\"a}ts- und Herzfrequenz-Monitoring zur Erfassung der Bewegungszeit und der Bewegungsintensit{\"a}t im schulischen und außerschulischen Kontext von Grundsch{\"u}lern im Land Brandenburg}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57937}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {"Kinderwelt ist Bewegungswelt" (Schmidt, 1997, S. 156, zitiert nach Schmidt, Hartmann-Tews \& Brettschneider, 2003, S. 31). Das kindliche Bewegungsverhalten hat sich bereits im Grundschulalter ver{\"a}ndert, so dass sich Bewegungsaktivit{\"a}ten von Kindern erheblich unterscheiden und keineswegs mehr verallgemeinert werden k{\"o}nnen. Richtet man den Fokus auf die Frage „Wie bewegt sind unsere Kinder?" so scheint diese von den Medien bereits beantwortet zu sein, da dort von ansteigendem Bewegungsmangel der heutigen Kinder gegen{\"u}ber fr{\"u}heren Generationen berichtet wird. Wenn es in den Diskussionen um den Gesundheitszustand unserer Kinder geht, nimmt die k{\"o}rperlich-sportliche Aktivit{\"a}t eine entscheidende Rolle ein. Bewegungsmangel ist hierbei ein zentraler Begriff der in der {\"O}ffentlichkeit diskutiert wird. Bei der Betrachtung der einzelnen Studien f{\"a}llt auf, dass deutliche Defizite in der Messung der k{\"o}rperlich-sportlichen Aktivit{\"a}t bestehen. Zentraler Kritikpunkt in den meisten Studien ist die subjektive Erfassung der k{\"o}rperlich-sportlichen Aktivit{\"a}t. Ein Großteil bisheriger Untersuchungen zum Bewegungsverhalten basiert auf Beobachtungen, Befragungen oder Bewegungstageb{\"u}chern. Diese liefern ausschließlich zum Teil subjektive Einsch{\"a}tzungen der Kinder oder Eltern {\"u}ber die tats{\"a}chliche Bewegungszeit und -intensit{\"a}t. Das objektive Erfassen der Aktivit{\"a}t bzw. Inaktivit{\"a}t ist zwar seit einigen Jahren zentraler Gegenstand vieler Studien, dennoch gilt es, dieses noch sachkundiger zu l{\"o}sen, um subjektive und objektive Daten zu vergleichen. Um dem Bewegungsmangel der heutigen Kinder entgegenzuwirken, sind empirisch abgesicherte Erkenntnisse {\"u}ber die Bedingungsfaktoren und die Folgen des ver{\"a}nderten Bewegungsverhaltens dringend n{\"o}tig. Die Quer- und L{\"a}ngsschnittuntersuchung umfasst die Bereiche Anthropometrie, die Erfassung der k{\"o}rperlich-sportlichen Aktivit{\"a}t und die Herzfrequenzmessung {\"u}ber 24h. F{\"u}r die Studie konnten 106 Jungen und M{\"a}dchen im Zeitraum von Januar 2007 bis April 2009 rekrutiert und {\"u}berpr{\"u}ft werden. Die physiologischen Parameter wurden mit Hilfe des ACTIHEART-Messsytems aufgezeichnet und berechnet. Die Ergebnisse zur k{\"o}rperlich-sportlichen Aktivit{\"a}t wurden in die Untersuchungsabschnitte Schulzeit gesamt, Pause, Sportunterricht, Nachmittag und 24h unterteilt. Durch das Messsystem werden die Bewegungsaktivit{\"a}t und die Herzfrequenz synchron aufgezeichnet. Das System nimmt die Beschleunigungswerte des K{\"o}rpers auf und speichert sie im frei w{\"a}hlbaren Zeitintervall, Short oder Long Term, in Form von „activity counts" ab. Das Messsytem berechnet weiterhin die Intensit{\"a}t k{\"o}rperlicher Aktivit{\"a}t.}, language = {de} } @phdthesis{Sietz2011, author = {Sietz, Diana}, title = {Dryland vulnerability : typical patterns and dynamics in support of vulnerability reduction efforts}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-58097}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {The pronounced constraints on ecosystem functioning and human livelihoods in drylands are frequently exacerbated by natural and socio-economic stresses, including weather extremes and inequitable trade conditions. Therefore, a better understanding of the relation between these stresses and the socio-ecological systems is important for advancing dryland development. The concept of vulnerability as applied in this dissertation describes this relation as encompassing the exposure to climate, market and other stresses as well as the sensitivity of the systems to these stresses and their capacity to adapt. With regard to the interest in improving environmental and living conditions in drylands, this dissertation aims at a meaningful generalisation of heterogeneous vulnerability situations. A pattern recognition approach based on clustering revealed typical vulnerability-creating mechanisms at global and local scales. One study presents the first analysis of dryland vulnerability with global coverage at a sub-national resolution. The cluster analysis resulted in seven typical patterns of vulnerability according to quantitative indication of poverty, water stress, soil degradation, natural agro-constraints and isolation. Independent case studies served to validate the identified patterns and to prove the transferability of vulnerability-reducing approaches. Due to their worldwide coverage, the global results allow the evaluation of a specific system's vulnerability in its wider context, even in poorly-documented areas. Moreover, climate vulnerability of smallholders was investigated with regard to their food security in the Peruvian Altiplano. Four typical groups of households were identified in this local dryland context using indicators for harvest failure risk, agricultural resources, education and non-agricultural income. An elaborate validation relying on independently acquired information demonstrated the clear correlation between weather-related damages and the identified clusters. It also showed that household-specific causes of vulnerability were consistent with the mechanisms implied by the corresponding patterns. The synthesis of the local study provides valuable insights into the tailoring of interventions that reflect the heterogeneity within the social group of smallholders. The conditions necessary to identify typical vulnerability patterns were summarised in five methodological steps. They aim to motivate and to facilitate the application of the selected pattern recognition approach in future vulnerability analyses. The five steps outline the elicitation of relevant cause-effect hypotheses and the quantitative indication of mechanisms as well as an evaluation of robustness, a validation and a ranking of the identified patterns. The precise definition of the hypotheses is essential to appropriately quantify the basic processes as well as to consistently interpret, validate and rank the clusters. In particular, the five steps reflect scale-dependent opportunities, such as the outcome-oriented aspect of validation in the local study. Furthermore, the clusters identified in Northeast Brazil were assessed in the light of important endogenous processes in the smallholder systems which dominate this region. In order to capture these processes, a qualitative dynamic model was developed using generalised rules of labour allocation, yield extraction, budget constitution and the dynamics of natural and technological resources. The model resulted in a cyclic trajectory encompassing four states with differing degree of criticality. The joint assessment revealed aggravating conditions in major parts of the study region due to the overuse of natural resources and the potential for impoverishment. The changes in vulnerability-creating mechanisms identified in Northeast Brazil are well-suited to informing local adjustments to large-scale intervention programmes, such as "Avan{\c{c}}a Brasil". Overall, the categorisation of a limited number of typical patterns and dynamics presents an efficient approach to improving our understanding of dryland vulnerability. Appropriate decision-making for sustainable dryland development through vulnerability reduction can be significantly enhanced by pattern-specific entry points combined with insights into changing hotspots of vulnerability and the transferability of successful adaptation strategies.}, language = {en} } @phdthesis{Massie2011, author = {Massie, Thomas Michael}, title = {Dynamic behavior of phytoplankton populations far from steady state : chemostat experiments and mathematical modeling}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-58102}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Nature changes continuously and is only seemingly at equilibrium. Environmental parameters like temperature, humidity or insolation may strongly fluctuate on scales ranging from seconds to millions of years. Being part of an ecosystem, species have to cope with these environmental changes. For ecologists, it is of special interest how individual responses to environmental changes affect the dynamics of an entire population - and, if this behavior is predictable. In this context, the demographic structure of a population plays a decisive role since it originates from processes of growth and mortality. These processes are fundamentally influenced by the environment. But, how exactly does the environment influence the behavior of populations? And what does the transient behavior look like? As a result from environmental influences on demography, so called cohorts form. They are age or size classes that are disproportionally represented in the demographic distribution of a population. For instance, if most old and young individuals die due to a cold spell, the population finally consists of mainly middle-aged individuals. Hence, the population got synchronized. Such a population tends to show regular fluctuations in numbers (denoted as oscillations) since the alternating phases of individual growth and population growth (due to reproduction) are now performed synchronously by the majority of the population.That is, one time the population growths, and the other time it declines due to mortality. Synchronous behavior is one of the most pervasive phenomena in nature. Gravitational synchrony in the solar system; fireflies flashing in unison; coordinate firing of pacemaker cells in the heart; electrons in a superconductor marching in lockstep. Whatever scale one looks at, in animate as well as inanimate systems, one is likely to encounter synchrony. In experiments with phytoplankton populations, I could show that this principle of synchrony (as used by physicists) could well-explain the oscillations observed in the experiments, too. The size of the fluctuations depended on the strength by which environmental parameters changed as well as on the demographic state of a population prior to this change. That is, two population living in different habitats can be equally influenced by an environmental change, however, the resulting population dynamics may be significantly different when both populations differed in their demographic state before. Moreover, specific mechanisms relevant for the dynamic behavior of populations, appear only when the environmental conditions change. In my experiments, the population density declined by 50\% after ressource supply was doubled. This counter-intuitive behavior can be explained by increasing ressource consumption. The phytoplankton cells grew larger and enhanced their individual constitution. But at the same time, reproduction was delayed and the population density declined due to the losses by mortality. Environmental influences can also synchronize two or more populations over large distances, which is denoted as Moran effect. Assume two populations living on two distant islands. Although there is no exchange of individuals between them, both populations show a high similarity when comparing their time series. This is because the globally acting climate synchronizes the regionally acting weather on both island. Since the weather fluctuations influence the population dynamics, the Moran effect states that the synchrony between the environment equals the one between the populations. My experiments support this theory and also explain deviations arising when accounting for differences in the populations and the habitats they are living in. Moreover, model simulations and experiments astonishingly show that the synchrony between the populations can be higher than between the environment, when accounting for differences in the environmental fluctuations ("noise color").}, language = {de} } @phdthesis{Lossow2011, author = {Loßow, Kristina}, title = {Erzeugung und Charakterisierung von Mausmodellen mit lichtsensitivem Geschmackssystem zur Aufkl{\"a}rung der neuronalen Geschmackskodierung}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-58059}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Die Wahrnehmung von Geschmacksempfindungen beruht auf dem Zusammenspiel verschiedener Sinneseindr{\"u}cke wie Schmecken, Riechen und Tasten. Diese Komplexit{\"a}t der gustatorischen Wahrnehmung erschwert die Beantwortung der Frage wie Geschmacksinformationen vom Mund ins Gehirn weitergeleitet, prozessiert und kodiert werden. Die Analysen zur neuronalen Prozessierung von Geschmacksinformationen erfolgten zumeist mit Bitterstimuli am Mausmodell. Zwar ist bekannt, dass das Genom der Maus f{\"u}r 35 funktionelle Bitterrezeptoren kodiert, jedoch war nur f{\"u}r zwei unter ihnen ein Ligand ermittelt worden. Um eine bessere Grundlage f{\"u}r tierexperimentelle Arbeiten zu schaffen, wurden 16 der 35 Bitterrezeptoren der Maus heterolog in HEK293T-Zellen exprimiert und in Calcium-Imaging-Experimenten funktionell charakterisiert. Die Daten belegen, dass das Funktionsspektrum der Bitterrezeptoren der Maus im Vergleich zum Menschen enger ist und widerlegen damit die Aussage, dass humane und murine orthologe Rezeptoren durch das gleiche Ligandenspektrum angesprochen werden. Die Interpretation von tierexperimentellen Daten und die {\"U}bertragbarkeit auf den Menschen werden folglich nicht nur durch die Komplexit{\"a}t des Geschmacks, sondern auch durch Speziesunterschiede verkompliziert. Die Komplexit{\"a}t des Geschmacks beruht u. a. auf der Tatsache, dass Geschmacksstoffe selten isoliert auftreten und daher eine Vielzahl an Informationen kodiert werden muss. Um solche geschmacksstoffassoziierten Stimuli in der Analyse der gustatorischen Kommunikationsbahnen auszuschließen, sollten Opsine, die durch Licht spezifischer Wellenl{\"a}nge angeregt werden k{\"o}nnen, f{\"u}r die selektive Ersetzung von Geschmacksrezeptoren genutzt werden. Um die Funktionalit{\"a}t dieser angestrebten Knockout-Knockin-Modelle zu evaluieren, die eine Kopplung von Opsinen mit dem geschmacksspezifischen G-Protein Gustducin voraussetzte, wurden Oozyten vom Krallenfrosch Xenopus laevis mit dem Zwei-Elektroden-Spannungsklemm-Verfahren hinsichtlich dieser Interaktion analysiert. Der positiven Bewertung dieser Kopplung folgte die Erzeugung von drei Mauslinien, die in der kodierenden Region eines spezifischen Geschmacksrezeptors (Tas1r1, Tas1r2, Tas2r114) Photorezeptoren exprimierten. Durch RT-PCR-, In-situ-Hybridisierungs- und immunhistochemische Experimente konnte der erfolgreiche Knockout der Rezeptorgene und der Knockin der Opsine belegt werden. Der Nachweis der Funktionalit{\"a}t der Opsine im gustatorischen System wird Gegenstand zuk{\"u}nftiger Analysen sein. Bei erfolgreichem Beleg der Lichtempfindlichkeit von Geschmacksrezeptorzellen dieser Mausmodelle w{\"a}re ein System geschaffen, dass es erm{\"o}glichen w{\"u}rde, gustatorische neuronale Netzwerke und Hirnareale zu identifizieren, die auf einen reinen geschmacks- und qualit{\"a}tsspezifischen Stimulus zur{\"u}ckzuf{\"u}hren w{\"a}ren.}, language = {de} } @phdthesis{Wolff2011, author = {Wolff, Christian Michael}, title = {East African monsoon variability since the last glacial}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-58079}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {The impact of global warming on human water resources is attracting increasing attention. No other region in this world is so strongly affected by changes in water supply than the tropics. Especially in Africa, the availability and access to water is more crucial to existence (basic livelihoods and economic growth) than anywhere else on Earth. In East Africa, rainfall is mainly influenced by the migration of the Inter-Tropical Convergence Zone (ITCZ) and by the El Ni{\~n}o Southern Oscillation (ENSO) with more rain and floods during El Ni{\~n}o and severe droughts during La Ni{\~n}a. The forecasting of East African rainfall in a warming world requires a better understanding of the response of ENSO-driven variability to mean climate. Unfortunately, existing meteorological data sets are too short or incomplete to establish a precise evaluation of future climate. From Lake Challa near Mount Kilimanjaro, we report records from a laminated lake sediment core spanning the last 25,000 years. Analyzing a monthly cleared sediment trap confirms the annual origin of the laminations and demonstrates that the varve-thicknesses are strongly linked to the duration and strength of the windy season. Given the modern control of seasonal ITCZ location on wind and rain in this region and the inverse relation between the two, thicker varves represent windier and thus drier years. El Ni{\~n}o (La Ni{\~n}a) events are associated with wetter (drier) conditions in east Africa and decreased (increased) surface wind speeds. Based on this fact, the thickness of the varves can be used as a tool to reconstruct a) annual rainfall b) wind season strength, and c) ENSO variability. Within this thesis, I found evidence for centennialscale changes in ENSO-related rainfall variability during the last three millennia, abrupt changes in variability during the Medieval Climate Anomaly and the Little Ice Age, and an overall reduction in East African rainfall and its variability during the Last Glacial period. Climate model simulations support forward extrapolation from these lake-sediment data, indicating that a future Indian Ocean warming will enhance East Africa's hydrological cycle and its interannual variability in rainfall. Furthermore, I compared geochemical analyses from the sediment trap samples with a broad range of limnological, meteorological, and geological parameters to characterize the impact of sedimentation processes from the in-situ rocks to the deposited sediments. As a result an excellent calibration for existing μXRF data from Lake Challa over the entire 25,000 year long profile was provided. The climate development during the last 25,000 years as reconstructed from the Lake Challa sediments is in good agreement with other studies and highlights the complex interactions between long-term orbital forcing, atmosphere, ocean and land surface conditions. My findings help to understand how abrupt climate changes occur and how these changes correlate with climate changes elsewhere on Earth.}, language = {en} } @phdthesis{Felber2011, author = {Felber, Juliane}, title = {Der Berufseinstieg von {\"A}rztInnen als normatives kritisches Lebensereignis : eine L{\"a}ngsschnittuntersuchung}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-58028}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Im Rahmen einer prospektiven L{\"a}ngsschnittuntersuchung wurde der Berufseinstieg von {\"A}rztInnen (N = 185) als normatives kritisches Lebensereignis untersucht. Dazu wurden sie insgesamt drei Mal im Abstand von jeweils sechs Monaten im ersten Jahr nach ihrem Studiumsabschluss befragt (T1: in den ersten zwei Wochen nach dem Staatsexamen, T2: kurzzeitig nach dem Berufseinstieg, T3: im Schnitt 9.5 Monate nach dem Berufseinstieg). Die Ergebnisse zeigten zun{\"a}chst, dass unl{\"a}ngst examinierte Jung-{\"A}rztInnen, die sich vergleichsweise schlechter auf den Beruf durch das Studium vorbereitet f{\"u}hlten, ihren bevorstehenden Berufseinstieg negativer bewerteten und schon vor diesem beanspruchter waren. Die Bewertung des Berufseinstiegs vermittelte dabei den Zusammenhang zwischen einer schlechten Vorbereitung und der Beanspruchung. Arbeitsspezifische Copingfunktionalit{\"a}t wiederum pufferte den Zusammenhang zwischen einer schlechten Vorbereitung und der Bewertung des Berufseinstiegs. Das Problem einer als schlecht empfundenen Vorbereitung verdeutlichte sich in der L{\"a}ngsschnittanalyse - sie sagte eine h{\"o}here Beanspruchung zum zweiten Messzeitpunkt, d.h. nach dem Berufseinstieg, vorher. In der Untersuchung der Beanspruchungsentwicklung {\"u}ber die drei Messzeitpunkte hinweg fanden sich nur wenige Ver{\"a}nderungen. Es ließ sich zwar eine deutliche Zunahme der mittleren Depressivit{\"a}ts-Auspr{\"a}gungen {\"u}ber den Berufseinstieg hinweg herausstellen (T1-T2); auf anderen Beanspruchungsindikatoren zeigte sich jedoch kein direkter Effekt des Arbeitsbeginns bzw. fand sich auch keine Adaptation der Jung-{\"A}rztInnen an ihre neue Situation im Sinne einer sich verringernden Beanspruchung im weiteren Verlauf (T2-T3). In der Erkl{\"a}rung interindividueller Unterschiede in der Beanspruchung im Untersuchungszeitraum zeigte sich, dass die sich mit dem Berufseinstieg einstellende Arbeitsbelastung zum zweiten und dritten Messzeitpunkt erwartungsgem{\"a}ß positiv mit Beanspruchung assoziiert war. Die Arbeitsbelastungs-Beanspruchungs-Beziehung bestand jedoch nur im Querschnitt; in der L{\"a}ngsschnittanalyse fand sich kein Effekt der T2-Arbeitsbelastung auf die T3-Beanspruchung. Ausgangsunterschiede in psychischen Ressourcen wirkten einerseits direkt auf die Beanspruchung zu T2, zum Teil moderierten sie aber auch den Zusammenhang zwischen der Arbeitsbelastung und Beanspruchung: Eine h{\"o}here Resilienz und die Wahrnehmung sozialer Unterst{\"u}tzung sagten eine geringere Beanspruchung nach dem Berufseinstieg vorher. Jung-{\"A}rztInnen, die sich durch eine st{\"a}rkere Arbeitsbelastung auszeichneten, aber {\"u}ber ein funktionaleres Bew{\"a}ltigungsverhalten im Arbeitskontext verf{\"u}gten, waren kurzzeitig nach dem Berufseinstieg weniger beansprucht als stark arbeitsbelastete Jung-{\"A}rztInnen mit weniger funktionalem Coping. Verringerungen in den psychischen Ressourcen {\"u}ber den Berufseinstieg hinweg wirkten sich direkt, d.h. per se ung{\"u}nstig auf die Beanspruchung zum dritten Messzeitpunkt aus. Zudem interagierten sie mit der zu diesem Zeitpunkt bestehenden Arbeitsbelastung in Vorhersage der Beanspruchung. St{\"a}rker arbeitsbelastete Jung-{\"A}rztInnen, deren Copingfunktionalit{\"a}t und Wahrnehmung sozialer Unterst{\"u}tzung vom ersten zum dritten Messzeitpunkt abgenommen hatte, waren am Ende des Untersuchungszeitraums am st{\"a}rksten beansprucht. Hinsichtlich der Auswirkungen des Berufseinstiegs auf die Pers{\"o}nlichkeit der Jung-{\"A}rztInnen fanden sich ung{\"u}nstige Ver{\"a}nderungen: Sowohl die Auspr{\"a}gungen psychischer Ressourcen (Widerstandsf{\"a}higkeit, Wahrnehmung sozialer Unterst{\"u}tzung hinsichtlich der Arbeitst{\"a}tigkeit) als auch die der Big Five-Faktoren nahmen im Mittel ab. Interindividuelle Unterschiede in den Ver{\"a}nderungen ließen sich auf die Beanspruchung kurzzeitig nach dem Berufseinstieg (T2) bzw. auf deren Entwicklung in den Folgemonaten (T2-T3) zur{\"u}ckf{\"u}hren: Jene Jung-{\"A}rztInnen, die vergleichsweise stark beansprucht auf den Berufseinstieg reagiert hatten bzw. deren Beanspruchung im weiteren Verlauf zunahm, zeigten entsprechend ung{\"u}nstige Ver{\"a}nderungen. Die Ergebnisse zusammengefasst verdeutlicht sich folgende Problematik: Jung-{\"A}rztInnen, die weniger gut, d.h. pers{\"o}nlichkeitsbasiert gesch{\"u}tzt den Berufseinstieg absolvieren, reagieren st{\"a}rker beansprucht und sind dann auch diejenigen, deren Pers{\"o}nlichkeit sich in den ersten Arbeitsmonaten ung{\"u}nstig ver{\"a}ndert. Jung-{\"A}rztInnen mit geringen psychischen Ressourcen sind folglich nicht nur besonders vulnerabel f{\"u}r die Entwicklung von Beanspruchung angesichts belastender Arbeitsbedingungen, sondern ihre vergleichsweise hohe Beanspruchung bedingt eine weitere Verringerung des Schutz- und Pufferpotenzials ihrer Pers{\"o}nlichkeit. Es kommt zu einer ung{\"u}nstigen Akzentuierung der ohnehin schon vergleichsweise ressourcenschwachen Pers{\"o}nlichkeit, welche die Vulnerabilit{\"a}t f{\"u}r zuk{\"u}nftige Beanspruchung erh{\"o}ht. Aus den Ergebnissen l{\"a}sst sich ein Unterst{\"u}tzungsbedarf junger {\"A}rztInnen in der sensiblen und wegweisenden Berufseinstiegsphase ableiten. Neben einer Verbesserung ihrer Arbeitsbedingungen stellen eine rechtzeitige Sensibilisierung junger {\"A}rztInnen f{\"u}r den Arbeitsbelastungs-Beanspruchungs-Zusammenhang, ihre regelm{\"a}ßige Supervision sowie vor allem aber auch kompetenzorientiertes und ressourcenst{\"a}rkendes Feedback von den Mentoren und Vorgesetzten die Grundlage daf{\"u}r dar, dass die Jung-MedizinerInnen selbst gesund bleiben und sie die {\"a}rztliche T{\"a}tigkeit trotz ihres wohl stets hohen Belastungspotenzials als erf{\"u}llend und zufriedenstellend erleben.}, language = {de} } @phdthesis{Mallien2011, author = {Mallien, Grit}, title = {Explorative multizentrische Querschnittsstudie zur Diagnostik der Dysarthrie bei Progressiver Supranukle{\"a}rer Blickparese - PSP}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-58045}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Die Progressive Supranukle{\"a}re Blickparese (PSP) ist eine sporadisch auftretende neurodegenerative Erkrankung im Rahmen der atypischen Parkinson-Syndrome (APS), die im fr{\"u}hen Verlauf h{\"a}ufig mit dem Idiopathischen Parkinson-Syndrom (IPS) verwechselt wird. Dabei ist die Dysarthrie als eine erworbene, zentral bedingte sprechmotorische St{\"o}rung ein h{\"a}ufiges und fr{\"u}h auftretendes Symptom bei PSP. Bislang spricht man von einer eher unspezifischen „gemischten" Dysarthrie aus hypokinetischen, spastischen und auch ataktischen Komponenten. Im Rahmen einer explorativen Querschnittsstudie am „Fachkrankenhaus f{\"u}r Bewegungsst{\"o}rungen und Parkinson" Beelitz-Heilst{\"a}tten in Kooperation mit der „Entwicklungsgruppe Klinische Neuropsychologie" M{\"u}nchen (EKN) sowie der „Interdisziplin{\"a}ren Ambulanz f{\"u}r Bewegungsst{\"o}rungen" am Klinikum M{\"u}nchen-Großhadern wurden 50 Patienten dahingehend untersucht, ob sich f{\"u}r die Progressive Supranukle{\"a}re Blickparese (PSP) eine spezielle, fr{\"u}hzeitig zu diagnostizierende und differentialdiagnostisch relevante Dysarthrie beschreiben ließe. In diesem Zusammenhang soll gekl{\"a}rt werden, ob es sich um ph{\"a}notypische Auspr{\"a}gungen im Rahmen eines St{\"o}rungsspektrums handelt oder ob sich differenzierbare Subtypen der Krankheit, insbesondere ein „klassischer" PSP-Typ (PSP-RS) und ein „atypischer" PSP-Typ (PSP-P), auch im Bereich der Dysarthrie zeigen. Im Rahmen der Untersuchungen wurde der Schweregrad der Erkrankung mittels der „PSP-sensitiven Ratingskala (PSPRS)" gemessen. Die Dysarthriediagnostik erfolgte anhand der „Bogenhausener Dysarthrieskalen (BoDyS)" zur Beschreibung der Art und Auspr{\"a}gung der Dysarthrie bei PSP. Die Verst{\"a}ndlichkeit wurde mithilfe des „M{\"u}nchner Verst{\"a}ndlichkeits-Profils (MVP)" sowie eines weiteren Transkriptionsverfahrens ermittelt, wobei Ausschnitte aus den Tests zum Lesen und Nachsprechen der BoDyS zugrunde lagen. Weiterhin erfolgte eine Einsch{\"a}tzung der Nat{\"u}rlichkeit des Sprechens. Die Ergebnisse hinsichtlich des Einflusses von Nat{\"u}rlichkeit und Verst{\"a}ndlichkeit des Sprechens auf den Schweregrad der Dysarthrie zeigten, dass dieser modalit{\"a}ten{\"u}bergreifend mit beiden Schweregradaspekten korreliert, wenngleich es offenbar die Nat{\"u}rlichkeit des Sprechens ist, die bei PSP bereits fr{\"u}hzeitig beeintr{\"a}chtigt ist und somit als das entscheidende differentialdiagnostische Kriterium zur Differenzierung zwischen beiden PSP-Subtypen zu beurteilen ist, m{\"o}glicherweise auch gegen{\"u}ber anderen Parkinson-Syndromen. Anhand statistisch valider Ergebnisse konnten spezifische St{\"o}rungsmerkmale der Dysarthrie extrahiert werden, die eine signifikante Trennung von PSP-RS und PSP-P erm{\"o}glichen: eine leise und behaucht-heisere Stimme sowie ein verlangsamtes Sprechtempo und Hypernasalit{\"a}t. Damit k{\"o}nnen f{\"u}r die hier fokussierten Subtypen der PSP zwei unterschiedliche Dysarthrietypen postuliert werden. Danach wird dem Subtyp PSP-RS eine spastisch betonte Dysarthrie mit ausgepr{\"a}gter Verlangsamung des Sprechtempos zugeordnet, dem Subtyp PSP-P hingegen eine hypokinetische Dysarthrie mit behaucht-heiserer Hypophonie. Desweiteren konnte ein „Dysarthrie-Schwellenwert" als Zusatzkriterium f{\"u}r eine zeitliche Differenzierung beider PSP-Subtypen ermittelt werden. Anhand der Daten zeigte sich die Dysarthrie bei dem Subtyp PSP-RS gleich zu Beginn der Erkrankung, jedoch sp{\"a}testens 24 Monate danach. Hingegen konnte die Dysarthrie beim Subtyp PSP-P fr{\"u}hestens 24 Monate nach Erkrankungsbeginn festgestellt werden. Die Daten dieser Studie verdeutlichen, dass der Frage nach einer subtypenspezifischen Auspr{\"a}gung der Dysarthrie bei PSP eine L{\"a}ngsschnittsstudie folgen sollte, um die ermittelten Ergebnisse zu konsolidieren.}, language = {de} } @phdthesis{Malik2011, author = {Malik, Nishant}, title = {Extremes in events and dynamics : a nonlinear data analysis perspective on the past and present dynamics of the Indian summer monsoon}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-58016}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {To identify extreme changes in the dynamics of the Indian Summer Monsoon (ISM) in the past, I propose a new approach based on the quantification of fluctuations of a nonlinear similarity measure, to identify regimes of distinct dynamical complexity in short time series. I provide an analytical derivation for the relationship of the new measure with the dynamical invariants such as dimension and Lyapunov exponents of the underlying system. A statistical test is also developed to estimate the significance of the identified transitions. Our method is justified by uncovering bifurcation structures in several paradigmatic models, providing more complex transitions compared with traditional Lyapunov exponents. In a real world situation, we apply the method to identify millennial-scale dynamical transitions in Pleistocene proxy records of the south Asian summer monsoon system. We infer that many of these transitions are induced by the external forcing of solar insolation and are also affected by internal forcing on Monsoonal dynamics, i.e., the glaciation cycles of the Northern Hemisphere and the onset of the tropical Walker circulation. Although this new method has general applicability, it is particularly useful in analysing short palaeo-climate records. Rainfall during the ISM over the Indian subcontinent occurs in form of enormously complex spatiotemporal patterns due to the underlying dynamics of atmospheric circulation and varying topography. I present a detailed analysis of summer monsoon rainfall over the Indian peninsular using Event Synchronization (ES), a measure of nonlinear correlation for point processes such as rainfall. First, using hierarchical clustering I identify principle regions where the dynamics of monsoonal rainfall is more coherent or homogenous. I also provide a method to reconstruct the time delay patterns of rain events. Moreover, further analysis is carried out employing the tools of complex network theory. This study provides valuable insights into the spatial organization, scales, and structure of the 90th and 94th percentile rainfall events during the ISM (June to September). I furthermore analyse the influence of different critical synoptic atmospheric systems and the impact of the steep Himalayan topography on rainfall patterns. The presented method not only helps in visualising the structure of the extremeevent rainfall fields, but also identifies the water vapor pathways and decadal-scale moisture sinks over the region. Furthermore a simple scheme based on complex networks is presented to decipher the spatial intricacies and temporal evolution of monsoonal rainfall patterns over the last six decades. Some supplementary results on the evolution of monsoonal rainfall extremes over the last sixty years are also presented.}, language = {de} } @phdthesis{Krause2011, author = {Krause, Jette}, title = {An expert-based Bayesian investigation of greenhouse gas emission reduction options for German passenger vehicles until 2030}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57671}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {The present thesis introduces an iterative expert-based Bayesian approach for assessing greenhouse gas (GHG) emissions from the 2030 German new vehicle fleet and quantifying the impacts of their main drivers. A first set of expert interviews has been carried out in order to identify technologies which may help to lower car GHG emissions and to quantify their emission reduction potentials. Moreover, experts were asked for their probability assessments that the different technologies will be widely adopted, as well as for important prerequisites that could foster or hamper their adoption. Drawing on the results of these expert interviews, a Bayesian Belief Network has been built which explicitly models three vehicle types: Internal Combustion Engine Vehicles (which include mild and full Hybrid Electric Vehicles), Plug-In Hybrid Electric Vehicles, and Battery Electric Vehicles. The conditional dependencies of twelve central variables within the BBN - battery energy, fuel and electricity consumption, relative costs, and sales shares of the vehicle types - have been quantified by experts from German car manufacturers in a second series of interviews. For each of the seven second-round interviews, an expert's individually specified BBN results. The BBN have been run for different hypothetical 2030 scenarios which differ, e.g., in regard to battery development, regulation, and fuel and electricity GHG intensities. The present thesis delivers results both in regard to the subject of the investigation and in regard to its method. On the subject level, it has been found that the different experts expect 2030 German new car fleet emission to be at 50 to 65\% of 2008 new fleet emissions under the baseline scenario. They can be further reduced to 40 to 50\% of the emissions of the 2008 fleet though a combination of a higher share of renewables in the electricity mix, a larger share of biofuels in the fuel mix, and a stricter regulation of car CO\$_2\$ emissions in the European Union. Technically, 2030 German new car fleet GHG emissions can be reduced to a minimum of 18 to 44\% of 2008 emissions, a development which can not be triggered by any combination of measures modeled in the BBN alone but needs further commitment. Out of a wealth of existing BBN, few have been specified by individual experts through elicitation, and to my knowledge, none of them has been employed for analyzing perspectives for the future. On the level of methods, this work shows that expert-based BBN are a valuable tool for making experts' expectations for the future explicit and amenable to the analysis of different hypothetical scenarios. BBN can also be employed for quantifying the impacts of main drivers. They have been demonstrated to be a valuable tool for iterative stakeholder-based science approaches.}, language = {en} } @phdthesis{Schaal2011, author = {Schaal, Janina}, title = {Synthese und Photochemie von photoaktivierbaren Biomolek{\"u}len}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57929}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Mechanistische und kinetische Untersuchungen von komplexen zellul{\"a}ren Prozessen in situ sind in den vergangenen Jahren durch den Einsatz photoaktivierbarer Biomolek{\"u}le, sogenannter caged Verbindungen, m{\"o}glich geworden. Bei den caged Verbindungen handelt es sich um photolabile inaktive Derivate von biologisch aktiven Molek{\"u}len, aus denen durch ultraviolettes Licht mit Hilfe einer photochemischen Reaktion die nat{\"u}rliche, biologisch aktive Substanz schnell freigesetzt werden kann. Im Rahmen der vorliegenden Arbeit wurden caged Verbindungen von den Neurotransmittern Octopamin und Dopamin, dem Octopamin-Antagonist Epinastin, den Proteinsyntheseinhibitoren Emetin und Anisomycin, dem Protonophor CCCP und dem Riechstoff Bourgeonal hergestellt. Zur Synthese dieser caged Verbindungen wurden sowohl bekannte als auch verschiedene im Rahmen dieser Arbeit neu entwickelte photolabile Schutzgruppen mit einem (Cumarin-4-yl)methyl- bzw. einem 2-Nitrobenzyl-Ger{\"u}st eingesetzt. Entsprechende Syntheseverfahren wurden erarbeitet. Anschließend erfolgte eine umfassende physikalisch-chemische sowie photochemische Charakterisierung der erhaltenen caged Verbindungen. Dabei wurde besonders auf gute L{\"o}slichkeit in Wasser bei physiologischer Ionenst{\"a}rke, schnelle und effiziente Photoreaktivit{\"a}t, hohe Extinktion bei Wellenl{\"a}ngen von 350-430 nm und gute solvolytische Stabilit{\"a}t bei geringer Toxizit{\"a}t der freigesetzten Schutzgruppe geachtet. Ein Schwerpunkt bei der photochemischen Charakterisierung bildeten die Untersuchungen zur Quantifizierung der 2-Photonen-Anregung, uncaging action cross-sections, der Cumarinylmethyl-caged Verbindungen, aufgrund ihrer Bedeutung f{\"u}r die Photofreisetzung von Biomolek{\"u}len, da die gleichzeitige Absorption von 2 IR-Photonen eine h{\"o}here dreidimensionale Aufl{\"o}sung und eine wesentlich tiefere Gewebepenetration erlaubt. Mit Hilfe von Kooperationspartnern wurden zeitaufgel{\"o}sten Fluoreszenz- und IR-Messungen an verschiedenen (Cumarin-4-yl)methoxycarbonyl-caged Modellverbindungen durchgef{\"u}hrt, mit denen die Geschwindigkeitskonstanten k1 und kdecarb des Photolysemechanismus ermittelt wurde. Am Ende folgten die Anwendungserprobungen ausgew{\"a}hlter caged Verbindungen in einem Translationsassay bzw. in Zelluntersuchungen.}, language = {de} } @phdthesis{Wulf2011, author = {Wulf, Hendrik}, title = {Seasonal precipitation, river discharge, and sediment flux in the western Himalaya}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57905}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Rainfall, snow-, and glacial melt throughout the Himalaya control river discharge, which is vital for maintaining agriculture, drinking water and hydropower generation. However, the spatiotemporal contribution of these discharge components to Himalayan rivers is not well understood, mainly because of the scarcity of ground-based observations. Consequently, there is also little known about the triggers and sources of peak sediment flux events, which account for extensive hydropower reservoir filling and turbine abrasion. We therefore lack basic information on the distribution of water resources and controls of erosion processes. In this thesis, I employ various methods to assess and quantify general characteristics of and links between precipitation, river discharge, and sediment flux in the Sutlej Valley. First, I analyze daily precipitation data (1998-2007) from 80 weather stations in the western Himalaya, to decipher the distribution of rain- and snowfall. Rainfall magnitude frequency analyses indicate that 40\% of the summer rainfall budget is attributed to monsoonal rainstorms, which show higher variability in the orogenic interior than in frontal regions. Combined analysis of rainstorms and sediment flux data of a major Sutlej River tributary indicate that monsoonal rainfall has a first order control on erosion processes in the orogenic interior, despite the dominance of snowfall in this region. Second, I examine the contribution of rainfall, snow and glacial melt to river discharge in the Sutlej Valley (s55,000 km2), based on a distributed hydrological model, which covers the period 2000-2008. To achieve high spatial and daily resolution despite limited ground-based observations the hydrological model is forced by daily remote sensing data, which I adjusted and calibrated with ground station data. The calibration shows that the Tropical Rainfall Measuring Mission (TRMM) 3B42 rainfall product systematically overestimates rainfall in semi-arid and arid regions, increasing with aridity. The model results indicate that snowmelt-derived discharge (74\%) is most important during the pre-monsoon season (April to June) whereas rainfall (56\%) and glacial melt (17\%) dominate the monsoon season (July-September). Therefore, climate change most likely causes a reduction in river discharge during the pre-monsoon season, which especially affects the orogenic interior. Third, I investigate the controls on suspended sediment flux in different parts of the Sutlej catchments, based on daily gauging data from the past decade. In conjunction with meteorological data, earthquake records, and rock strength measurements I find that rainstorms are the most frequent trigger of high-discharge events with peaks in suspended sediment concentrations (SSC) that account for the bulk of the suspended sediment flux. The suspended sediment flux increases downstream, mainly due to increases in runoff. Pronounced erosion along the Himalayan Front occurs throughout the monsoon season, whereas efficient erosion of the orogenic interior is confined to single extreme events. The results of this thesis highlight the importance of snow and glacially derived melt waters in the western Himalaya, where extensive regions receive only limited amounts of monsoonal rainfall. These regions are therefore particularly susceptible to global warming with major implications on the hydrological cycle. However, the sediment discharge data show that infrequent monsoonal rainstorms that pass the orographic barrier of the Higher Himalaya are still the primary trigger of the highest-impact erosion events, despite being subordinate to snow and glacially-derived discharge. These findings may help to predict peak sediment flux events and could underpin the strategic development of preventative measures for hydropower infrastructures.}, language = {en} } @phdthesis{BarbosaPfannes2011, author = {Barbosa Pfannes, Eva Katharina}, title = {Probing the regulatory mechanisms of the actomyosin system in motile cells}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57812}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Actin-based directional motility is important for embryonic development, wound healing, immune responses, and development of tissues. Actin and myosin are essential players in this process that can be subdivided into protrusion, adhesion, and traction. Protrusion is the forward movement of the membrane at the leading edge of the cell. Adhesion is required to enable movement along a substrate, and traction finally leads to the forward movement of the entire cell body, including its organelles. While actin polymerization is the main driving force in cell protrusions, myosin motors lead to the contraction of the cell body. The goal of this work was to study the regulatory mechanisms of the motile machinery by selecting a representative key player for each stage of the signaling process: the regulation of Arp2/3 activity by WASP (actin system), the role of cGMP in myosin II assembly (myosin system), and the influence of phosphoinositide signaling (upstream receptor pathway). The model organism chosen for this work was the social ameba Dictyostelium discoideum, due to the well-established knowledge of its cytoskeletal machinery, the easy handling, and the high motility of its vegetative and starvation developed cells. First, I focused on the dynamics of the actin cytoskeleton by modulating the activity of one of its key players, the Arp2/3 complex. This was achieved using the carbazole derivative Wiskostatin, an inhibitor of the Arp2/3 activator WASP. Cells treated with Wiskostatin adopted a round shape, with no of few pseudopodia. With the help of a microfluidic cell squeezer device, I could show that Wiskostatin treated cells display a reduced mechanical stability, comparable to cells treated with the actin disrupting agent Latrunculin A. Furthermore, the WASP inhibited cells adhere stronger to a surface and show a reduced motility and chemotactic performance. However, the overall F-actin content in the cells was not changed. Confocal microscopy and TIRF microscopy imaging showed that the cells maintained an intact actin cortex. Localized dynamic patches of increased actin polymerization were observed that, however, did not lead to membrane deformation. This indicated that the mechanisms of actin-driven force generation were impaired in Wiskostatin treated cells. It is concluded that in these cells, an altered architecture of the cortical network leads to a reduced overall stiffness of the cell, which is insufficient to support the force generation required for membrane deformation and pseudopod formation. Second, the role of cGMP in myosin II dynamics was investigated. Cyclic GMP is known to regulate the association of myosin II with the cytoskeleton. In Dictyostelium, intracellular cGMP levels increase when cells are exposed to chemoattractants, but also in response to osmotic stress. To study the influence of cyclic GMP on actin and myosin II dynamics, I used the laser-induced photoactivation of a DMACM-caged-Br-cGMP to locally release cGMP inside the cell. My results show that cGMP directly activates the myosin II machinery, but is also able to induce an actin response independently of cAMP receptor activation and signaling. The actin response was observed in both vegetative and developed cells. Possible explanations include cGMP-induced actin polymerization through VASP (vasodilator-stimulated phosphoprotein) or through binding of cGMP to cyclic nucleotide-dependent kinases. Finally, I investigated the role of phosphoinositide signaling using the Polyphosphoinositide-Binding Peptide (PBP10) that binds preferentially to PIP2. Phosphoinositides can recruit actin-binding proteins to defined subcellular sites and alter their activity. Neutrophils, as well as developed Dictyostelium cells produce PIP3 in the plasma membrane at their leading edge in response to an external chemotactic gradient. Although not essential for chemotaxis, phosphoinositides are proposed to act as an internal compass in the cell. When treated with the peptide PBP10, cells became round, with fewer or no pseudopods. PH-CRAC translocation to the membrane still occurs, even at low cAMP stimuli, but cell motility (random and directional) was reduced. My data revealed that the decrease in the pool of available PIP2 in the cell is sufficient to impair cell motility, but enough PIP2 remains so that PIP3 is formed in response to chemoattractant stimuli. My data thus highlights how sensitive cell motility and morphology are to changes in the phosphoinositide signaling. In summary, I have analyzed representative regulatory mechanisms that govern key parts of the motile machinery and characterized their impact on cellular properties including mechanical stability, adhesion and chemotaxis.}, language = {en} } @phdthesis{Fellinger2011, author = {Fellinger, Tim-Patrick}, title = {Hydrothermal and ionothermal carbon structures}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57825}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {The needs for sustainable energy generation, but also a sustainable chemistry display the basic motivation of the current thesis. By different single investigated cases, which are all related to the element carbon, the work can be devided into two major topics. At first, the sustainable synthesis of "useful" carbon materials employing the process of hydrothermal carbonisation (HC) is described. In the second part, the synthesis of heteroatom - containing carbon materials for electrochemical and fuel cell applications employing ionic liquid precursors is presented. On base of a thorough review of the literature on hydrothermolysis and hydrothermal carbonisation of sugars in addition to the chemistry of hydroxymethylfurfural, mechanistic considerations of the formation of hydrothermal carbon are proposed. On the base of these reaction schemes, the mineral borax, is introduced as an additive for the hydrothermal carbonisation of glucose. It was found to be a highly active catalyst, resulting in decreased reaction times and increased carbon yields. The chemical impact of borax, in the following is exploited for the modification of the micro- and nanostructure of hydrothermal carbon. From the borax - mediated aggregation of those primary species, widely applicable, low density, pure hydrothermal carbon aerogels with high porosities and specific surface areas are produced. To conclude the first section of the thesis, a short series of experiments is carried out, for the purpose of demonstrating the applicability of the HC model to "real" biowaste i.e. watermelon waste as feedstock for the production of useful materials. In part two cyano - containing ionic liquids are employed as precursors for the synthesis of high - performance, heteroatom - containing carbon materials. By varying the ionic liquid precursor and the carbonisation conditions, it was possible to design highly active non - metal electrocatalyst for the reduction of oxygen. In the direct reduction of oxygen to water (like used in polymer electrolyte fuel cells), compared to commercial platinum catalysts, astonishing activities are observed. In another example the selective and very cost efficient electrochemical synthesis of hydrogen peroxide is presented. In a last example the synthesis of graphitic boron carbon nitrides from the ionic liquid 1 - Ethyl - 3 - methylimidazolium - tetracyanoborate is investigated in detail. Due to the employment of unreactive salts as a new tool to generate high surface area these materials were first time shown to be another class of non - precious metal oxygen reduction electrocatalyst.}, language = {en} } @phdthesis{Pourteau2011, author = {Pourteau, Amaury}, title = {Closure of the Neotethys Ocean in Anatolia : structural, petrologic and geochronologic insights from low-grade high-pressure metasediments, Afyon Zone}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57803}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {The complete consumption of the oceanic domain of a tectonic plate by subduction into the upper mantle results in continent subduction, although continental crust is typically of lower density than the upper mantle. Thus, the sites of former oceanic domains (named suture zones) are generally decorated with stratigraphic sequences deposited along continental passive margins that were metamorphosed under low-grade, high-pressure conditions, i.e., low temperature/depth ratios (< 15°C/km) with respect to geothermal gradients in tectonically stable regions. Throughout the Mesozoic and Cenozoic (i.e., since ca. 250 Ma), the Mediterranean realm was shaped by the closure of the Tethyan Ocean, which likely consisted in numerous oceanic domains and microcontinents. However, the exact number and position of Tethyan oceans and continents (i.e., the Tethyan palaeogeography) remains debated. This is particularly the case of Western and Central Anatolia, where a continental fragment was accreted to the southern composite margin of the Eurasia sometime between the Late Cretaceous and the early Cenozoic. The most frontal part of this microcontinent experienced subduction-related metamorphism around 85-80 Ma, and collision-related metamorphism affected more external parts around 35 Ma. This unsually-long period between subduction- and collision-related metamorphisms (ca. 50 Ma) in units ascribed to the same continental edge constitutes a crucial issue to address in order to unravel how Anatolia was assembled. The Afyon Zone is a tectono-sedimentary unit exposed south and structurally below the front high-pressure belt. It is composed of a Mesozoic sedimentary sequence deposited on top of a Precambrian to Palaeozoic continental substratum, which can be traced from Northwestern to southern Central Anatolia, along a possible Tethyan suture. Whereas the Afyon Zone was defined as a low-pressure metamorphic unit, high-pressure minerals (mainly Fe-Mg-carpholite in metasediments) were recently reported from its central part. These findings shattered previous conceptions on the tectono-metamorphic evolution of the Afyon Zone in particular, and of the entire region in general, and shed light on the necessity to revise the regional extent of subduction-related metamorphism by re-inspecting the petrology of poorly-studied metasediments. In this purpose, I re-evaluated the metamorphic evolution of the entire Afyon Zone starting from field observations. Low-grade, high-pressure mineral assemblages (Fe-Mg-carpholite and glaucophane) are reported throughout the unit. Well-preserved carpholite-chloritoid assemblages are useful to improve our understanding of mineral relations and transitions in the FeO-MgO-Al2O3-SiO2-H2O system during rocks' travel down to depth (prograde metamorphism). Inspection of petrographic textures, minute variations in mineral composition and Mg-Fe distribution among carpholite-chloritoid assemblages documents multistage mineral growth, accompanied by a progressive enrichment in Mg, and strong element partitioning. Using an updated database of mineral thermodynamic properties, I modelled the pressure and temperature conditions that are consistent with textural and chemical observations. Carpholite-bearing assemblages in the Afyon Zone account for a temperature increase from 280 to 380°C between 0.9 and 1.1 GPa (equivalent to a depth of 30-35 km). In order to further constrain regional geodynamics, first radiometric ages were determined in close association with pressure-temperature estimates for the Afyon Zone, as well as two other tectono-sedimentary units from the same continental passive margin (the {\"O}ren and Kurudere-Nebiler Units from SW Anatolia). For age determination, I employed 40Ar-39Ar geochronology on white mica in carpholite-bearing rocks. For thermobarometry, a multi-equilibrium approach was used based on quartz-chlorite-mica and quartz-chlorite-chloritoid associations formed at the expense of carpholite-bearing assemblages, i.e., during the exhumation from the subduction zone. This combination allows deciphering the significance of the calculated radiometric ages in terms of metamorphic conditions. Results show that the Afyon Zone and the {\"O}ren Unit represent a latest Cretaceous high-pressure metamorphic belt, and the Kurudere-Nebiler Unit was affected by subduction-related metamorphism around 45 Ma and cooled down after collision-related metamorphism around 26 Ma. The results provided in the present thesis and from the literature allow better understanding continental amalgamation in Western Anatolia. It is shown that at least two distinct oceanic branches, whereas only one was previously considered, have closed during continuous north-dipping subduction between 92 and 45 Ma. Between 85-80 and 70-65 Ma, a narrow continental domain (including the Afyon Zone) was buried into a subduction zone within the northern oceanic strand. Parts of the subducted continent crust were exhumed while the upper oceanic plate was transported southwards. Subduction of underlying lithosphere persisted, leading to the closure of the southern oceanic branch and to subduct the front of a second continental domain (including the Kurudere-Nebiler Unit). This followed by a continental collisional stage characterized by the cease of subduction, crustal thicknening and the detachment of the subducting oceanic slab from the accreted continent lithosphere. The present study supports that in the late Mesozoic the East Mediterranean realm had a complex tectonic configuration similar to present Southeast Asia or the Caribbean, with multiple, coexisting oceanic basins, microcontinents and subduction zones.}, language = {en} } @phdthesis{Spreyer2011, author = {Spreyer, Kathrin}, title = {Does it have to be trees? : Data-driven dependency parsing with incomplete and noisy training data}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57498}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {We present a novel approach to training data-driven dependency parsers on incomplete annotations. Our parsers are simple modifications of two well-known dependency parsers, the transition-based Malt parser and the graph-based MST parser. While previous work on parsing with incomplete data has typically couched the task in frameworks of unsupervised or semi-supervised machine learning, we essentially treat it as a supervised problem. In particular, we propose what we call agnostic parsers which hide all fragmentation in the training data from their supervised components. We present experimental results with training data that was obtained by means of annotation projection. Annotation projection is a resource-lean technique which allows us to transfer annotations from one language to another within a parallel corpus. However, the output tends to be noisy and incomplete due to cross-lingual non-parallelism and error-prone word alignments. This makes the projected annotations a suitable test bed for our fragment parsers. Our results show that (i) dependency parsers trained on large amounts of projected annotations achieve higher accuracy than the direct projections, and that (ii) our agnostic fragment parsers perform roughly on a par with the original parsers which are trained only on strictly filtered, complete trees. Finally, (iii) when our fragment parsers are trained on artificially fragmented but otherwise gold standard dependencies, the performance loss is moderate even with up to 50\% of all edges removed.}, language = {en} } @phdthesis{Schuette2011, author = {Sch{\"u}tte, Moritz}, title = {Evolutionary fingerprints in genome-scale networks}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57483}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Mathematical modeling of biological phenomena has experienced increasing interest since new high-throughput technologies give access to growing amounts of molecular data. These modeling approaches are especially able to test hypotheses which are not yet experimentally accessible or guide an experimental setup. One particular attempt investigates the evolutionary dynamics responsible for today's composition of organisms. Computer simulations either propose an evolutionary mechanism and thus reproduce a recent finding or rebuild an evolutionary process in order to learn about its mechanism. The quest for evolutionary fingerprints in metabolic and gene-coexpression networks is the central topic of this cumulative thesis based on four published articles. An understanding of the actual origin of life will probably remain an insoluble problem. However, one can argue that after a first simple metabolism has evolved, the further evolution of metabolism occurred in parallel with the evolution of the sequences of the catalyzing enzymes. Indications of such a coevolution can be found when correlating the change in sequence between two enzymes with their distance on the metabolic network which is obtained from the KEGG database. We observe that there exists a small but significant correlation primarily on nearest neighbors. This indicates that enzymes catalyzing subsequent reactions tend to be descended from the same precursor. Since this correlation is relatively small one can at least assume that, if new enzymes are no "genetic children" of the previous enzymes, they certainly be descended from any of the already existing ones. Following this hypothesis, we introduce a model of enzyme-pathway coevolution. By iteratively adding enzymes, this model explores the metabolic network in a manner similar to diffusion. With implementation of an Gillespie-like algorithm we are able to introduce a tunable parameter that controls the weight of sequence similarity when choosing a new enzyme. Furthermore, this method also defines a time difference between successive evolutionary innovations in terms of a new enzyme. Overall, these simulations generate putative time-courses of the evolutionary walk on the metabolic network. By a time-series analysis, we find that the acquisition of new enzymes appears in bursts which are pronounced when the influence of the sequence similarity is higher. This behavior strongly resembles punctuated equilibrium which denotes the observation that new species tend to appear in bursts as well rather than in a gradual manner. Thus, our model helps to establish a better understanding of punctuated equilibrium giving a potential description at molecular level. From the time-courses we also extract a tentative order of new enzymes, metabolites, and even organisms. The consistence of this order with previous findings provides evidence for the validity of our approach. While the sequence of a gene is actually subject to mutations, its expression profile might also indirectly change through the evolutionary events in the cellular interplay. Gene coexpression data is simply accessible by microarray experiments and commonly illustrated using coexpression networks where genes are nodes and get linked once they show a significant coexpression. Since the large number of genes makes an illustration of the entire coexpression network difficult, clustering helps to show the network on a metalevel. Various clustering techniques already exist. However, we introduce a novel one which maintains control of the cluster sizes and thus assures proper visual inspection. An application of the method on Arabidopsis thaliana reveals that genes causing a severe phenotype often show a functional uniqueness in their network vicinity. This leads to 20 genes of so far unknown phenotype which are however suggested to be essential for plant growth. Of these, six indeed provoke such a severe phenotype, shown by mutant analysis. By an inspection of the degree distribution of the A.thaliana coexpression network, we identified two characteristics. The distribution deviates from the frequently observed power-law by a sharp truncation which follows after an over-representation of highly connected nodes. For a better understanding, we developed an evolutionary model which mimics the growth of a coexpression network by gene duplication which underlies a strong selection criterion, and slight mutational changes in the expression profile. Despite the simplicity of our assumption, we can reproduce the observed properties in A.thaliana as well as in E.coli and S.cerevisiae. The over-representation of high-degree nodes could be identified with mutually well connected genes of similar functional families: zinc fingers (PF00096), flagella, and ribosomes respectively. In conclusion, these four manuscripts demonstrate the usefulness of mathematical models and statistical tools as a source of new biological insight. While the clustering approach of gene coexpression data leads to the phenotypic characterization of so far unknown genes and thus supports genome annotation, our model approaches offer explanations for observed properties of the coexpression network and furthermore substantiate punctuated equilibrium as an evolutionary process by a deeper understanding of an underlying molecular mechanism.}, language = {en} } @phdthesis{Jurish2011, author = {Jurish, Bryan}, title = {Finite-state canonicalization techniques for historical German}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-55789}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {This work addresses issues in the automatic preprocessing of historical German input text for use by conventional natural language processing techniques. Conventional techniques cannot adequately account for historical input text due to conventional tools' reliance on a fixed application-specific lexicon keyed by contemporary orthographic surface form on the one hand, and the lack of consistent orthographic conventions in historical input text on the other. Historical spelling variation is treated here as an error-correction problem or "canonicalization" task: an attempt to automatically assign each (historical) input word a unique extant canonical cognate, thus allowing direct application-specific processing (tagging, parsing, etc.) of the returned canonical forms without need for any additional application-specific modifications. In the course of the work, various methods for automatic canonicalization are investigated and empirically evaluated, including conflation by phonetic identity, conflation by lemma instantiation heuristics, canonicalization by weighted finite-state rewrite cascade, and token-wise disambiguation by a dynamic Hidden Markov Model.}, language = {en} } @phdthesis{Off2011, author = {Off, Thomas}, title = {Durchg{\"a}ngige Verfolgbarkeit im Vorfeld der Softwareentwicklung von E-Government-Anwendungen : ein ontologiebasierter und modellgetriebener Ansatz am Beispiel von B{\"u}rgerdiensten}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57478}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Die {\"o}ffentliche Verwaltung setzt seit mehreren Jahren E-Government-Anwendungssysteme ein, um ihre Verwaltungsprozesse intensiver mit moderner Informationstechnik zu unterst{\"u}tzen. Da die {\"o}ffentliche Verwaltung in ihrem Handeln in besonderem Maße an Recht und Gesetz gebunden ist verst{\"a}rkt und verbreitet sich der Zusammenhang zwischen den Gesetzen und Rechtsvorschriften einerseits und der zur Aufgabenunterst{\"u}tzung eingesetzten Informationstechnik andererseits. Aus Sicht der Softwaretechnik handelt es sich bei diesem Zusammenhang um eine spezielle Form der Verfolgbarkeit von Anforderungen (engl. Traceability), die so genannte Verfolgbarkeit im Vorfeld der Anforderungsspezifikation (Pre-Requirements Specification Traceability, kurz Pre-RS Traceability), da sie Aspekte betrifft, die relevant sind, bevor die Anforderungen in eine Spezifikation eingeflossen sind (Urspr{\"u}nge von Anforderungen). Der Ansatz dieser Arbeit leistet einen Beitrag zur Verfolgbarkeit im Vorfeld der Anforderungsspezifikation von E-Government-Anwendungssystemen. Er kombiniert dazu aktuelle Entwicklungen und Standards (insbesondere des World Wide Web Consortium und der Object Management Group) aus den Bereichen Verfolgbarkeit von Anforderungen, Semantic Web, Ontologiesprachen und modellgetriebener Softwareentwicklung. Der L{\"o}sungsansatz umfasst eine spezielle Ontologie des Verwaltungshandeln, die mit den Techniken, Methoden und Werkzeugen des Semantic Web eingesetzt wird, um in Texten von Rechtsvorschriften relevante Urspr{\"u}nge von Anforderungen durch Annotationen mit einer definierten Semantik zu versehen. Darauf aufbauend wird das Ontology Definition Metamodel (ODM) verwendet, um die Annotationen als spezielle Individuen einer Ontologie auf Elemente der Unified Modeling Language (UML) abzubilden. Dadurch entsteht ein neuer Modelltyp Pre-Requirements Model (PRM), der das Vorfeld der Anforderungsspezifikation formalisiert. Modelle diesen Typs k{\"o}nnen auch verwendet werden, um Aspekte zu formalisieren die sich nicht oder nicht vollst{\"a}ndig aus dem Text der Rechtsvorschrift ergeben. Weiterhin bietet das Modell die M{\"o}glichkeit zum Anschluss an die modellgetriebene Softwareentwicklung. In der Arbeit wird deshalb eine Erweiterung der Model Driven Architecture (MDA) vorgeschlagen. Zus{\"a}tzlich zu den etablierten Modelltypen Computation Independent Model (CIM), Platform Independent Model (PIM) und Platform Specific Model (PSM) k{\"o}nnte der Einsatz des PRM Vorteile f{\"u}r die Verfolgbarkeit bringen. Wird die MDA mit dem PRM auf das Vorfeld der Anforderungsspezifikation ausgeweitet, kann eine Transformation des PRM in ein CIM als initiale Anforderungsspezifikation erfolgen, indem der MOF Query View Transformation Standard (QVT) eingesetzt wird. Als Teil des QVT-Standards ist die Aufzeichnung von Verfolgbarkeitsinformationen bei Modelltransformationen verbindlich. Um die semantische L{\"u}cke zwischen PRM und CIM zu {\"u}berbr{\"u}cken, erfolgt analog zum Einsatz des Plattformmodells (PM) in der PIM nach PSM Transformation der Einsatz spezieller Hilfsmodelle. Es kommen daf{\"u}r die im Projekt "E-LoGo" an der Universit{\"a}t Potsdam entwickelten Referenzmodelle zum Einsatz. Durch die Aufzeichnung der Abbildung annotierter Textelemente auf Elemente im PRM und der Transformation der Elemente des PRM in Elemente des CIM kann durchg{\"a}ngige Verfolgbarkeit im Vorfeld der Anforderungsspezifikation erreicht werden. Der Ansatz basiert auf einer so genannten Verfolgbarkeitsdokumentation in Form verlinkter Hypertextdokumente, die mittels XSL-Stylesheet erzeugt wurden und eine Verbindung zur graphischen Darstellung des Diagramms (z. B. Anwendungsfall-, Klassendiagramm der UML) haben. Der Ansatz unterst{\"u}tzt die horizontale Verfolgbarkeit zwischen Elementen unterschiedlicher Modelle vorw{\"a}rts- und r{\"u}ckw{\"a}rtsgerichtet umfassend. Er bietet außerdem vertikale Verfolgbarkeit, die Elemente des gleichen Modells und verschiedener Modellversionen in Beziehung setzt. {\"U}ber den offensichtlichen Nutzen einer durchg{\"a}ngigen Verfolgbarkeit im Vorfeld der Anforderungsspezifikation (z. B. Analyse der Auswirkungen einer Gesetzes{\"a}nderung, Ber{\"u}cksichtigung des vollst{\"a}ndigen Kontextes einer Anforderung bei ihrer Priorisierung) hinausgehend, bietet diese Arbeit eine erste Ansatzm{\"o}glichkeit f{\"u}r eine Feedback-Schleife im Prozess der Gesetzgebung. Stehen beispielsweise mehrere gleichwertige Gestaltungsoptionen eines Gesetzes zur Auswahl, k{\"o}nnen die Auswirkungen jeder Option analysiert und der Aufwand ihrer Umsetzung in E-Government-Anwendungen als Auswahlkriterium ber{\"u}cksichtigt werden. Die am 16. M{\"a}rz 2011 in Kraft getretene {\"A}nderung des NKRG schreibt eine solche Analyse des so genannten „Erf{\"u}llungsaufwands" f{\"u}r Teilbereiche des Verwaltungshandelns bereits heute verbindlich vor. F{\"u}r diese Analyse kann die vorliegende Arbeit einen Ansatz bieten, um zu fundierten Aussagen {\"u}ber den {\"A}nderungsaufwand eingesetzter E-Government-Anwendungssysteme zu kommen.}, language = {de} } @phdthesis{Ehrke2011, author = {Ehrke, J{\"u}rgen}, title = {Zur Stabilisierung fragmentierter Staaten}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-155-4}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-53975}, school = {Universit{\"a}t Potsdam}, pages = {366}, year = {2011}, abstract = {Die internationale Staatengemeinschaft steht Sezessionsbestrebungen zur Aufspaltung bestehender Staaten gew{\"o}hnlich ablehnend gegen{\"u}ber. Gleichzeitig wendet sie in vielen L{\"a}ndern Instrumente der Entwicklungspolitik an und greift so auch in den dortigen politischen Prozess ein. Untersucht wird, inwiefern Entwicklungspolitik so gestaltet werden kann, dass sie nicht, quasi als Nebenwirkung, einer Sezessionsbewegung zum Durchbruch verhilft. Betrachtet wird dabei neben der gezielten F{\"o}rderung wirtschaftlichen Wachstums auch das Instrument der Dezentralisierung, das oft als Mittel zur „Beruhigung" separatistischer Bestrebungen vorgeschlagen wird. Zuvor jedoch wird aufgewiesen, dass eine Politik, die Sezessionen verhindern will, zumindest in vielen F{\"a}llen auch moralphilosophisch schl{\"u}ssig begr{\"u}ndet werden kann. Den Abschluss der Arbeit bilden drei Fallstudien zu Sezessionen auf dem Gebiet der ehemaligen Sowjetunion.}, language = {de} } @phdthesis{Kalbitz2011, author = {Kalbitz, Ren{\´e}}, title = {Stability of polarization in organic ferroelectric metal-insulator-semiconductor structures}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57276}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Organic thin film transistors (TFT) are an attractive option for low cost electronic applications and may be used for active matrix displays and for RFID applications. To extend the range of applications there is a need to develop and optimise the performance of non-volatile memory devices that are compatible with the solution-processing fabrication procedures used in plastic electronics. A possible candidate is an organic TFT incorporating the ferroelectric co-polymer poly(vinylidenefluoride-trifluoroethylene)(P(VDF-TrFE)) as the gate insulator. Dielectric measurements have been carried out on all-organic metal-insulator-semiconductor structures with the ferroelectric polymer poly(vinylidenefluoride-trifluoroethylene) (P(VDF-TrFE)) as the gate insu-lator. The capacitance spectra of MIS devices, were measured under different biases, showing the effect of charge accumulation and depletion on the Maxwell-Wagner peak. The position and height of this peak clearly indicates the lack of stable depletion behavior and the decrease of mobility when increasing the depletion zone width, i.e. upon moving into the P3HT bulk. The lack of stable depletion was further investigated with capacitance-voltage (C-V) measurements. When the structure was driven into depletion, C-V plots showed a positive flat-band voltage shift, arising from the change in polarization state of the ferroelectric insulator. When biased into accumulation, the polarization was reversed. It is shown that the two polarization states are stable i.e. no depolarization occurs below the coercive field. However, negative charge trapped at the semiconductor-insulator interface during the depletion cycle masks the negative shift in flat-band voltage expected during the sweep to accumulation voltages. The measured output characteristics of the studied ferroelectric-field-effect transistors confirmed the results of the C-V plots. Furthermore, the results indicated a trapping of electrons at the positively charged surfaces of the ferroelectrically polarized P(VDF-TrFE) crystallites near the insulator/semiconductor in-terface during the first poling cycles. The study of the MIS structure by means of thermally stimulated current (TSC) revealed further evidence for the stability of the polarization under depletion voltages. It was shown, that the lack of stable depletion behavior is caused by the compensation of the orientational polarization by fixed electrons at the interface and not by the depolarization of the insulator, as proposed in several publications. The above results suggest a performance improvement of non-volatile memory devices by the optimization of the interface.}, language = {en} } @phdthesis{Giesewetter2011, author = {Giesewetter, Stefan}, title = {Resolute readings of later Wittgenstein and the challenge of avoiding hierarchies in philosophy}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-57021}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {This dissertation addresses the question: How did later Wittgenstein aim to achieve his goal of putting forward a way of dissolving philosophical problems which centered on asking ourselves what we mean by our words - yet which did not entail any claims about the essence of language and meaning? This question is discussed with reference to "resolute" readings of Wittgenstein. I discuss the readings of James Conant, Oskari Kuusela, and Martin Gustafsson. I follow Oskari Kuusela's claim that in order to fully appreciate how later Wittgenstein meant to achieve his goal, we need to clearly see how he aimed to do away with hierarchies in philosophy: Not only is the dissolution of philosophical problems via the method of clarifying the grammar of expressions to be taken as independent from any theses about what meaning must be - but furthermore, it is to be taken as independent from the dissolution of any particular problem via this method. As Kuusela stresses, this also holds for the problems involving rule-following and meaning: the clarification of the grammar of "rule" and "meaning" has no foundational status - it is nothing on which the method of clarifying the grammar of expressions as such were meant to in any way rely on. The lead question of this dissertation then is: What does it mean to come to see that the method of dissolving philosophical problems by asking "How is this word actually used?" does not in any way rely on the results of our having investigated the grammar of the particular concepts "rule" and "meaning"? What is the relation of such results - results such as "To follow a rule, [...], to obey an order, [...] are customs (uses, institutions)" or "The meaning of a word is its use in the language" - to this method? From this vantage point, I concern myself with two aspects of the readings of Gustafsson and Kuusela. In Gustafsson, I concern myself with his idea that the dissolution of philosophical problems in general "relies on" the very agreement which - during the dissolution of the rule-following problem - comes out as a presupposition for our talk of "meaning" in terms of rules. In Kuusela, I concern myself with his idea that Wittgenstein, in adopting a way of philosophical clarification which investigates the actual use of expressions, is following the model of "meaning as use" - which model he had previously introduced in order to perspicuously present an aspect of the actual use of the word "meaning". This dissertation aims to show how these two aspects of Gustafsson's and Kuusela's readings still fail to live up to the vision of Wittgenstein as a philosopher who aimed to do away with any hierarchies in philosophy. I base this conclusion on a detailed analysis of which of the occasions where Wittgenstein invokes the notions of "use" and "application" (as also "agreement") have to do with the dissolution of a specific problem only, and which have to do with the dissolution of philosophical problems in general. I discuss Wittgenstein's remarks on rule-following, showing how in the dissolution of the rule-following paradox, notions such as "use", "application", and "practice" figure on two distinct logical levels. I then discuss an example of what happens when this distinction is not duly heeded: Gordon Baker and Peter Hacker's idea that the rule-following remarks have a special significance for his project of dissolving philosophical problems as such. I furnish an argument to the effect that their idea that the clarification of the rules of grammar of the particular expression "following a rule" could answer a question about rules of grammar in general rests on a conflation of the two logical levels on which "use" occurs in the rule-following remarks, and that it leads into a regress. I then show that Gustafsson's view - despite its decisive advance over Baker and Hacker - contains a version of that same idea, and that it likewise leads into a regress. Finally, I show that Kuusela's idea of a special significance of the model "meaning as use" for the whole of the method of stating rules for the use of words is open to a regress argument of a similar kind as that he himself advances against Baker and Hacker. I conclude that in order to avoid such a regress, we need to reject the idea that the grammatical remark "The meaning of a word is its use in the language" - because of the occurrence of "use" in it - stood in any special relation to the method of dissolving philosophical problems by describing the use of words. Rather, we need to take this method as independent from this outcome of the investigation of the use of the particular word "meaning".}, language = {en} } @phdthesis{Schoenheit2011, author = {Sch{\"o}nheit, J{\"o}rg}, title = {A phagocyte-specific Irf8 gene enhancer establishes early conventional dendritic cell commitment}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-55482}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Haematopoietic development is a complex process that is strictly hierarchically organized. Here, the phagocyte lineages are a very heterogeneous cell compartment with specialized functions in innate immunity and induction of adaptive immune responses. Their generation from a common precursor must be tightly controlled. Interference within lineage formation programs for example by mutation or change in expression levels of transcription factors (TF) is causative to leukaemia. However, the molecular mechanisms driving specification into distinct phagocytes remain poorly understood. In the present study I identify the transcription factor Interferon Regulatory Factor 8 (IRF8) as the specification factor of dendritic cell (DC) commitment in early phagocyte precursors. Employing an IRF8 reporter mouse, I showed the distinct Irf8 expression in haematopoietic lineage diversification and isolated a novel bone marrow resident progenitor which selectively differentiates into CD8α+ conventional dendritic cells (cDCs) in vivo. This progenitor strictly depends on Irf8 expression to properly establish its transcriptional DC program while suppressing a lineage-inappropriate neutrophile program. Moreover, I demonstrated that Irf8 expression during this cDC commitment-step depends on a newly discovered myeloid-specific cis-enhancer which is controlled by the haematopoietic transcription factors PU.1 and RUNX1. Interference with their binding leads to abrogation of Irf8 expression, subsequently to disturbed cell fate decisions, demonstrating the importance of these factors for proper phagocyte cell development. Collectively, these data delineate a transcriptional program establishing cDC fate choice with IRF8 in its center.}, language = {en} } @phdthesis{Zurell2011, author = {Zurell, Damaris}, title = {Integrating dynamic and statistical modelling approaches in order to improve predictions for scenarios of environmental change}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-56845}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Species respond to environmental change by dynamically adjusting their geographical ranges. Robust predictions of these changes are prerequisites to inform dynamic and sustainable conservation strategies. Correlative species distribution models (SDMs) relate species' occurrence records to prevailing environmental factors to describe the environmental niche. They have been widely applied in global change context as they have comparably low data requirements and allow for rapid assessments of potential future species' distributions. However, due to their static nature, transient responses to environmental change are essentially ignored in SDMs. Furthermore, neither dispersal nor demographic processes and biotic interactions are explicitly incorporated. Therefore, it has often been suggested to link statistical and mechanistic modelling approaches in order to make more realistic predictions of species' distributions for scenarios of environmental change. In this thesis, I present two different ways of such linkage. (i) Mechanistic modelling can act as virtual playground for testing statistical models and allows extensive exploration of specific questions. I promote this 'virtual ecologist' approach as a powerful evaluation framework for testing sampling protocols, analyses and modelling tools. Also, I employ such an approach to systematically assess the effects of transient dynamics and ecological properties and processes on the prediction accuracy of SDMs for climate change projections. That way, relevant mechanisms are identified that shape the species' response to altered environmental conditions and which should hence be considered when trying to project species' distribution through time. (ii) I supplement SDM projections of potential future habitat for black grouse in Switzerland with an individual-based population model. By explicitly considering complex interactions between habitat availability and demographic processes, this allows for a more direct assessment of expected population response to environmental change and associated extinction risks. However, predictions were highly variable across simulations emphasising the need for principal evaluation tools like sensitivity analysis to assess uncertainty and robustness in dynamic range predictions. Furthermore, I identify data coverage of the environmental niche as a likely cause for contrasted range predictions between SDM algorithms. SDMs may fail to make reliable predictions for truncated and edge niches, meaning that portions of the niche are not represented in the data or niche edges coincide with data limits. Overall, my thesis contributes to an improved understanding of uncertainty factors in predictions of range dynamics and presents ways how to deal with these. Finally I provide preliminary guidelines for predictive modelling of dynamic species' response to environmental change, identify key challenges for future research and discuss emerging developments.}, language = {en} } @phdthesis{Haase2011, author = {Haase, Martin F.}, title = {Modification of nanoparticle surfaces for emulsion stabilization and encapsulation of active molecules for anti-corrosive coatings}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-55413}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Within this work, three physicochemical methods for the hydrophobization of initially hydrophilic solid particles are investigated. The modified particles are then used for the stabilization of oil-in-water (o/w) emulsions. For all introduced methods electrostatic interactions between strongly or weakly charged groups in the system are es-sential. (i) Short chain alkylammonium bromides (C4 - C12) adsorb on oppositely charged solid particles. Macroscopic contact angle measurements of water droplets under air and hexane on flat silica surfaces in dependency of the surface charge density and alkylchain-length allow the calculation of the surface energy and give insights into the emulsification properties of solid particles modified with alkyltrimethylammonium bromides. The measure-ments show an increase of the contact angle with increasing surface charge density, due to the enhanced adsorp-tion of the oppositely charged alkylammonium bromides. Contact angles are higher for longer alkylchain lengths. The surface energy calculations show that in particular the surface-hexane or surface-air interfacial en-ergy is being lowered upon alkylammonium adsorption, while a significant increase of the surface-water interfa-cial energy occurs only at long alkyl chain lengths and high surface charge densities. (ii) The thickness and the charge density of an adsorbed weak polyelectrolyte layer (e.g. PMAA, PAH) influence the wettability of nanoparticles (e.g. alumina, silica, see Scheme 1(b)). Furthermore, the isoelectric point and the pH range of colloidal stability of particle-polyelectrolyte composites depend on the thickness of the weak polye-lectrolyte layer. Silica nanoparticles with adsorbed PAH and alumina nanoparticles with adsorbed PMAA be-come interfacially active and thus able to stabilize o/w emulsions when the degree of dissociation of the polye-lectrolyte layer is below 80 \%. The average droplet size after emulsification of dodecane in water depends on the thickness and the degree of dissociation of the adsorbed PE-layer. The visualization of the particle-stabilized o/w emulsions by cryogenic SEM shows that for colloidally stable alumina-PMAA composites the oil-water interface is covered with a closely packed monolayer of particles, while for the colloidally unstable case closely packed aggregated particles deposit on the interface. (iii) By emulsifying a mixture of the corrosion inhibitor 8-hydroxyquinoline (8-HQ) and styrene with silica nanoparticles a highly stable o/w emulsion can be obtained in a narrow pH window. The amphoteric character of 8-HQ enables a pH dependent electrostatic interaction with silica nanoparticles, which can render them interfa-cially active. Depending on the concentration and the degree of dissociation of 8-HQ the adsorption onto silica results from electrostatic or aromatic interactions between 8-HQ and the particle-surface. At intermediate amounts of adsorbed 8-HQ the oil wettability of the particles becomes sufficient for stabilizing o/w emulsions. Cryogenic SEM visualization shows that the particles arrange then in a closely packed shell consisting of partly of aggregated domains on the droplet interface. For further increasing amounts of adsorbed 8-HQ the oil wet-tability is reduced again and the particles ability to stabilize emulsions decreases. By the addition of hexadecane to the oil phase the size of the droplets can be reduced down to 200 nm by in-creasing the silica mass fraction. Subsequent polymerization produces corrosion inhibitor filled (20 wt-\%) poly-styrene-silica composite particles. The measurement of the release of 8-hydroxyquinoline shows a rapid increase of 8-hydroxyquinoline in a stirred aqueous solution indicating the release of the total content in less than 5 min-utes. The method is extended for the encapsulation of other organic corrosion inhibitors. The silica-polymer-inhibitor composite particles are then dispersed in a water based alkyd emulsion, and the dispersion is used to coat flat aluminium substrates. After drying and cross-linking the polmer-film Confocal Laser Scanning Micros-copy is employed revealing a homogeneous distribution of the particles in the film. Electrochemical Impedance Spectroscopy in aqueous electrolyte solutions shows that films with aggregated particle domains degrade with time and don't provide long-term corrosion protection of the substrate. However, films with highly dispersed particles have high barrier properties for corrosive species. The comparison of films containing silica-polystyrene composite particles with and without 8-hydroxyquinoline shows higher electrochemical impedances when the inhibitor is present in the film. By applying the Scanning Vibrating Electrode Technique the localized corrosion rate in the fractured area of scratched polymer films containing the silica-polymer-inhibitor composite particles is studied. Electrochemical corrosion cannot be suppressed but the rate is lowered when inhibitor filled composite particles are present in the film. By depositing six polyelectrolyte layers on particle stabilized emulsion droplets their surface morphology changes significantly as shown by SEM visualization. When the oil wettability of the outer polyelectrolyte layer increases, the polyelectrolyte coated droplets can act as emulsion stabilizers themselves by attaching onto bigger oil droplets in a closely packed arrangement. In the presence of 3 mM LaCl3 8-HQ hydrophobized silica particles aggregate strongly on the oil-water inter-face. The application of an ultrasonic field can remove two dimensional shell-compartments from the droplet surface, which are then found in the aqueous bulk phase. Their size ranges up to 1/4th of the spherical particle shell.}, language = {en} } @phdthesis{Weidlich2011, author = {Weidlich, Matthias}, title = {Behavioural profiles : a relational approach to behaviour consistency}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-55590}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Business Process Management (BPM) emerged as a means to control, analyse, and optimise business operations. Conceptual models are of central importance for BPM. Most prominently, process models define the behaviour that is performed to achieve a business value. In essence, a process model is a mapping of properties of the original business process to the model, created for a purpose. Different modelling purposes, therefore, result in different models of a business process. Against this background, the misalignment of process models often observed in the field of BPM is no surprise. Even if the same business scenario is considered, models created for strategic decision making differ in content significantly from models created for process automation. Despite their differences, process models that refer to the same business process should be consistent, i.e., free of contradictions. Apparently, there is a trade-off between strictness of a notion of consistency and appropriateness of process models serving different purposes. Existing work on consistency analysis builds upon behaviour equivalences and hierarchical refinements between process models. Hence, these approaches are computationally hard and do not offer the flexibility to gradually relax consistency requirements towards a certain setting. This thesis presents a framework for the analysis of behaviour consistency that takes a fundamentally different approach. As a first step, an alignment between corresponding elements of related process models is constructed. Then, this thesis conducts behavioural analysis grounded on a relational abstraction of the behaviour of a process model, its behavioural profile. Different variants of these profiles are proposed, along with efficient computation techniques for a broad class of process models. Using behavioural profiles, consistency of an alignment between process models is judged by different notions and measures. The consistency measures are also adjusted to assess conformance of process logs that capture the observed execution of a process. Further, this thesis proposes various complementary techniques to support consistency management. It elaborates on how to implement consistent change propagation between process models, addresses the exploration of behavioural commonalities and differences, and proposes a model synthesis for behavioural profiles.}, language = {en} } @phdthesis{Junginger2011, author = {Junginger, Annett}, title = {East African climate variability on different time scales : the Suguta Valley in the African-Asian Monsoon Domain}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-56834}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Motivation | Societal and economic needs of East Africa rely entirely on the availability of water, which is governed by the regular onset and retreat of the rainy seasons. Fluctuations in the amounts of rainfall has tremendous impact causing widespread famine, disease outbreaks and human migrations. Efforts towards high resolution forecasting of seasonal precipitation and hydrological systems are therefore needed, which requires high frequency short to long-term analyses of available climate data that I am going to present in this doctoral thesis by three different studies. 15,000 years - Suguta Valley | The main study of this thesis concentrated on the understanding of humidity changes within the last African Humid Period (AHP, 14.8-5.5 ka BP). The nature and causes of intensity variations of the West-African (WAM) and Indian Summer monsoons (ISM) during the AHP, especially their exact influence on regional climate relative to each other, is currently intensely debated. Here, I present a high-resolution multiproxy lake-level record spanning the AHP from the remote Suguta Valley in the northern Kenya Rift, located between the WAM and ISM domains. The presently desiccated valley was during the AHP filled by a 300 m deep and 2200 km2 large palaeo-lake due to an increase in precipitation of only 26\%. The record explains the synchronous onset of large lakes in the East African Rift System (EARS) with the longitudinal shift of the Congo Air Boundary (CAB) over the East African and Ethiopian Plateaus, as the direct consequence of an enhanced atmospheric pressure gradient between East-Africa and India due to a precessional-forced northern hemisphere insolation maximum. Pronounced, and abrupt lake level fluctuations during the generally wet AHP are explained by small-scale solar irradiation changes weakening this pressure gradient atmospheric moisture availability preventing the CAB from reaching the study area. Instead, the termination of the AHP occurred, in a non-linear manner due to a change towards an equatorial insolation maximum ca. 6.5 ka ago extending the AHP over Ethiopia and West-Africa. 200 years - Lake Naivasha | The second part of the thesis focused on the analysis of a 200 year-old sediment core from Lake Naivasha in the Central Kenya Rift, one of the very few present freshwater lakes in East Africa. The results revealed and confirmed, that the appliance of proxy records for palaeo-climate reconstruction for the last 100 years within a time of increasing industrialisation and therefore human impact to the proxy-record containing sites are broadly limited. Since the middle of the 20th century, intense anthropogenic activity around Lake Naivasha has led to cultural eutrophication, which has overprinted the influence of natural climate variation to the lake usually inferred from proxy records such as diatoms, transfer-functions, geochemical and sedimentological analysis as used in this study. The results clarify the need for proxy records from remote unsettled areas to contribute with pristine data sets to current debates about anthropologic induced global warming since the past 100 years. 14 years - East African Rift | In order to avoid human influenced data sets and validate spatial and temporal heterogeneities of proxy-records from East Africa, the third part of the thesis therefore concentrated on the most recent past 14 years (1996-2010) detecting climate variability by using remotely sensed rainfall data. The advancement in the spatial coverage and temporal resolutions of rainfall data allow a better understanding of influencing climate mechanisms and help to better interpret proxy-records from the EARS in order to reconstruct past climate conditions. The study focuses on the dynamics of intraseasonal rainfall distribution within catchments of eleven lake basins in the EARS that are often used for palaeo-climate studies. We discovered that rainfall in adjacent basins exhibits high complexities in the magnitudes of intraseasonal variability, biennial to triennial precipitation patterns and even are not necessarily correlated often showing opposite trends. The variability among the watersheds is driven by the complex interaction of topography, in particular the shape, length and elevation of the catchment and its relative location to the East African Rift System and predominant influence of the ITCZ or CAB, whose locations and intensities are dependent on the strength of low pressure cells over India, SST variations in the Atlantic, Pacific or Indian Ocean, QBO phases and the 11-year solar cycle. Among all seasons we observed, January-September is the season of highest and most complex rainfall variability, especially for the East African Plateau basins, most likely due to the irregular penetration and sensitivity of the CAB.}, language = {en} } @phdthesis{Giorgi2011, author = {Giorgi, Federico Manuel}, title = {Expression-based reverse engineering of plant transcriptional networks}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-56760}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Regulation of gene transcription plays a major role in mediating cellular responses and physiological behavior in all known organisms. The finding that similar genes are often regulated in a similar manner (co-regulated or "co-expressed") has directed several "guilt-by-association" approaches in order to reverse-engineer the cellular transcriptional networks using gene expression data as a compass. This kind of studies has been considerably assisted in the recent years by the development of high-throughput transcript measurement platforms, specifically gene microarrays and next-generation sequencing. In this thesis, I describe several approaches for improving the extraction and interpretation of the information contained in microarray based gene expression data, through four steps: (1) microarray platform design, (2) microarray data normalization, (3) gene network reverse engineering based on expression data and (4) experimental validation of expression-based guilt-by-association inferences. In the first part test case is shown aimed at the generation of a microarray for Thellungiella salsuginea, a salt and drought resistant close relative to the model plant Arabidopsis thaliana; the transcripts of this organism are generated on the combination of publicly available ESTs and newly generated ad-hoc next-generation sequencing data. Since the design of a microarray platform requires the availability of highly reliable and non-redundant transcript models, these issues are addressed consecutively, proposing several different technical solutions. In the second part I describe how inter-array correlation artifacts are generated by the common microarray normalization methods RMA and GCRMA, together with the technical and mathematical characteristics underlying the problem. A solution is proposed in the form of a novel normalization method, called tRMA. The third part of the thesis deals with the field of expression-based gene network reverse engineering. It is shown how different centrality measures in reverse engineered gene networks can be used to distinguish specific classes of genes, in particular essential genes in Arabidopsis thaliana, and how the use of conditional correlation can add a layer of understanding over the information flow processes underlying transcript regulation. Furthermore, several network reverse engineering approaches are compared, with a particular focus on the LASSO, a linear regression derivative rarely applied before in global gene network reconstruction, despite its theoretical advantages in robustness and interpretability over more standard methods. The performance of LASSO is assessed through several in silico analyses dealing with the reliability of the inferred gene networks. In the final part, LASSO and other reverse engineering methods are used to experimentally identify novel genes involved in two independent scenarios: the seed coat mucilage pathway in Arabidopsis thaliana and the hypoxic tuber development in Solanum tuberosum. In both cases an interesting method complementarity is shown, which strongly suggests a general use of hybrid approaches for transcript expression-based inferences. In conclusion, this work has helped to improve our understanding of gene transcription regulation through a better interpretation of high-throughput expression data. Part of the network reverse engineering methods described in this thesis have been included in a tool (CorTo) for gene network reverse engineering and annotated visualization from custom transcription datasets.}, language = {en} }