@article{Тарковская2016, author = {Тарковская, Марина}, title = {Биографические мотивы в фильмах Андрея Тарковского}, series = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 1}, journal = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 1}, publisher = {Universit{\"a}t Potsdam}, address = {Potsdam}, isbn = {978-3-86956-351-0}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-95512}, pages = {41 -- 48}, year = {2016}, abstract = {Биографические мотивы условно можно разделить на два вида: 1. Отдельные небольшие эпизоды или впечатления, запомнившие- ся Тарковскому, которые заняли свое точное место в его сценариях и фильмах. Режиссер А. Гордон условно назвал этот прием Тарковского «теорией пазлов». Такие элементы встречаются почти во всех фильмах Андрея Тарковского. 2. Расширенное включение в фильмы автобиографии, естественно, не во всей полноте. К таким фильмам относятся Зеркало (1974) и Offret («Жертвоприношение» - 1986).}, language = {ru} } @article{Салынский2016, author = {Салынский, Дмитрий}, title = {Солярис как процесс}, series = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 1}, journal = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 1}, publisher = {Universit{\"a}t Potsdam}, address = {Potsdam}, isbn = {978-3-86956-351-0}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-95529}, pages = {49 -- 63}, year = {2016}, language = {ru} } @inproceedings{КононенкоCalabrettoMayeretal.2016, author = {Кононенко, Наталия and Calabretto, Roberto and Mayer, Michael and Киршбаум, Генрих and Salvestroni, Simonetta and Zehnder, Christian and Булгакова, Oксана and Vassilieva, Ekaterina and Paperny, Vladimir and Engel, Christine and Christians, Heiko and Petzer, Tatjana and Pellanda, Marina and Вардиц, Владислава}, title = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico}, editor = {Franz, Norbert P.}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-352-7}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-90975}, pages = {313}, year = {2016}, abstract = {Vom 18. bis 20. September 2014 versammelten sich an der Universit{\"a}t Potsdam kultur- und filmwissenschaftlich arbeitende Wissenschaftler zu einem Andrej Tarkovskij gewidmeten Symposium, dem ersten internationalen. Die 25 Teilnehmer kamen n{\"a}mlich aus neun L{\"a}ndern. Dadurch, dass nicht wenige auch eine - wie man heute sagt - „Migrationsbiographie" haben, potenzierte sich die durch die jeweils unterschiedliche Herkunft bedingte Multiperspektivik, zu der jedoch der Modus der Wissenschaftlichkeit ein deutlich relativierendes Korrektiv bildet. Der vorliegende Band enth{\"a}lt im Wesentlichen die dort vorgestellten Beitr{\"a}ge, aber auch die der Fachleute, die nicht pers{\"o}nlich hatten nach Potsdam kommen k{\"o}nnen.}, language = {de} } @article{Кононенко2016, author = {Кононенко, Наталия}, title = {Звуковые метафоры культурных пространств в фильмах А. Тарковского и А. Сокурова}, series = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 2}, journal = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 2}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-352-7}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-100431}, pages = {323 -- 338}, year = {2016}, language = {ru} } @article{Киршбаум2016, author = {Киршбаум, Генрих}, title = {Экфразы Андрея Тарковского и эстетика меланхолии в эпоху застоя}, series = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 2}, journal = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 2}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-352-7}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-100464}, pages = {377 -- 397}, year = {2016}, language = {ru} } @article{Градинари2016, author = {Градинари, Ирина}, title = {О новых истоках кино}, series = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 1}, journal = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 1}, publisher = {Universit{\"a}t Potsdam}, address = {Potsdam}, isbn = {978-3-86956-351-0}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-95556}, pages = {109 -- 126}, year = {2016}, language = {ru} } @article{Вардиц2016, author = {Вардиц, Владислава}, title = {Андрей Тарковский и Ларс фон Триер}, series = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 2}, journal = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 2}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-352-7}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-100562}, pages = {573 -- 586}, year = {2016}, language = {ru} } @article{Булгакова2016, author = {Булгакова, Оксана}, title = {Блуждающие цитаты}, series = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 2}, journal = {Andrej Tarkovskij: Klassiker - Классик - Classic - Classico : Beitr{\"a}ge zum internationalen Tarkovskij-Symposium an der Universit{\"a}t Potsdam ; Band 2}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-352-7}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-100499}, pages = {435 -- 449}, year = {2016}, language = {ru} } @book{Şener2016, author = {Şener, Ula{\c{s}}}, title = {Die Neutralit{\"a}tstheorie des Geldes}, edition = {2., durchgesehene Aufl.}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-344-2}, issn = {2197-8069}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-83164}, publisher = {Universit{\"a}t Potsdam}, pages = {v, 87}, year = {2016}, abstract = {{\"O}konomen wie Wirtschaftspolitiker berufen sich auf die Neutralit{\"a}tstheorie des Geldes, wenn sie eine Entpolitisierung der Geldpolitik fordern. Sowohl die Theorie der Geldneutralit{\"a}t als auch das Paradigma der Entpolitisierung der Geldpolitik sind jedoch problematisch. Die polit{\"o}konomischen Entwicklungen nach der globalen Finanz- und Wirtschaftskrise 2007/2008 und die j{\"u}ngsten Kontroversen {\"u}ber die Rolle und Bedeutung von Geld haben dies deutlich vor Augen gef{\"u}hrt. Die vorliegende Arbeit diskutiert zun{\"a}chst die konzeptionellen Grundlagen und theoretischen Modelle der Geldneutralit{\"a}t. Anschließend werden die zentralen theoretischen Annahmen und Aussagen der Neutralit{\"a}tstheorie aus einer kritischen heterodoxen Perspektive hinterfragt. Es wird argumentiert, dass Geld eine nicht-neutrale Produktionskraft ist, die weder {\"o}konomisch noch sozial neutral ist. Die Bedingungen, unter denen Geld verf{\"u}gbar ist und zirkuliert, sind richtungsweisend f{\"u}r die {\"o}konomische Entwicklung. Daher kann es auch kein neutrales Geld oder gar eine apolitische Geldpolitik geben.}, language = {de} } @phdthesis{Şener2016, author = {Şener, Ula{\c{s}}}, title = {Die relative Autonomie der Zentralbank}, series = {Potsdam Economic Studies}, volume = {5}, journal = {Potsdam Economic Studies}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-362-6}, issn = {2196-8691}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-88856}, school = {Universit{\"a}t Potsdam}, pages = {xvii, 375}, year = {2016}, abstract = {Die vorliegende Arbeit untersucht die Politik der Zentralbankunabh{\"a}ngigkeit (ZBU) am Beispiel der T{\"u}rkei. Im Mittelpunkt der Arbeit stehen theoretische und empirische Fragen und Probleme, die sich im Zusammenhang mit der ZBU stellen und anhand der t{\"u}rkischen Geldpolitik diskutiert werden. Ein zentrales Ziel der Arbeit besteht darin, zu untersuchen, ob und inwiefern die t{\"u}rkische Zentralbank nach Erlangung der de jure institutionellen Unabh{\"a}ngigkeit tats{\"a}chlich als unabh{\"a}ngig und entpolitisiert eingestuft werden kann. Um diese Forschungsfrage zu beantworten, werden die institutionellen Bedingungen, die Ziele und die Regeln, nach denen sich die t{\"u}rkische Geldpolitik richtet, gekl{\"a}rt. Anschließend wird empirisch {\"u}berpr{\"u}ft, ob die geldpolitische Praxis der CBRT sich an dem offiziell vorgegebenen Regelwerk orientiert. Die Hauptthese dieser Arbeit lautet, dass die formelle Unabh{\"a}ngigkeit der CBRT und die regelorientierte Geldpolitik nicht mit einer Entpolitisierung der Geldpolitik in der T{\"u}rkei gleichzusetzen ist. Als Alternative schl{\"a}gt die vorliegende Studie vor, den institutionellen Status der CBRT als einen der relativen Autonomie zu untersuchen. Auch eine de jure unabh{\"a}ngige Zentralbank kann sich nicht von politischen Eingriffen abkoppeln, wie das Fallbeispiel T{\"u}rkei zeigen wird.}, language = {de} } @misc{ĆwiekKupczyńskaAltmannArendetal.2016, author = {Ćwiek-Kupczyńska, Hanna and Altmann, Thomas and Arend, Daniel and Arnaud, Elizabeth and Chen, Dijun and Cornut, Guillaume and Fiorani, Fabio and Frohmberg, Wojciech and Junker, Astrid and Klukas, Christian and Lange, Matthias and Mazurek, Cezary and Nafissi, Anahita and Neveu, Pascal and van Oeveren, Jan and Pommier, Cyril and Poorter, Hendrik and Rocca-Serra, Philippe and Sansone, Susanna-Assunta and Scholz, Uwe and van Schriek, Marco and Seren, {\"U}mit and Usadel, Bj{\"o}rn and Weise, Stephan and Kersey, Paul and Krajewski, Paweł}, title = {Measures for interoperability of phenotypic data}, series = {Plant methods}, journal = {Plant methods}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-407299}, pages = {18}, year = {2016}, abstract = {Background: Plant phenotypic data shrouds a wealth of information which, when accurately analysed and linked to other data types, brings to light the knowledge about the mechanisms of life. As phenotyping is a field of research comprising manifold, diverse and time ‑consuming experiments, the findings can be fostered by reusing and combin‑ ing existing datasets. Their correct interpretation, and thus replicability, comparability and interoperability, is possible provided that the collected observations are equipped with an adequate set of metadata. So far there have been no common standards governing phenotypic data description, which hampered data exchange and reuse. Results: In this paper we propose the guidelines for proper handling of the information about plant phenotyping experiments, in terms of both the recommended content of the description and its formatting. We provide a docu‑ ment called "Minimum Information About a Plant Phenotyping Experiment", which specifies what information about each experiment should be given, and a Phenotyping Configuration for the ISA ‑Tab format, which allows to practically organise this information within a dataset. We provide examples of ISA ‑Tab ‑formatted phenotypic data, and a general description of a few systems where the recommendations have been implemented. Conclusions: Acceptance of the rules described in this paper by the plant phenotyping community will help to achieve findable, accessible, interoperable and reusable data.}, language = {en} } @article{UestuenSheikhGimenezIbanezetal.2016, author = {{\"U}st{\"u}n, Suayib and Sheikh, Arsheed and Gimenez-Ibanez, Selena and Jones, Alexandra and Ntoukakis, Vardis and B{\"o}rnke, Frederik}, title = {The Proteasome Acts as a Hub for Plant Immunity and Is Targeted by Pseudomonas Type III Effectors}, series = {Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants}, volume = {172}, journal = {Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants}, publisher = {American Society of Plant Physiologists}, address = {Rockville}, issn = {0032-0889}, doi = {10.1104/pp.16.00808}, pages = {1941 -- 1958}, year = {2016}, abstract = {Recent evidence suggests that the ubiquitin-proteasome system is involved in several aspects of plant immunity and that a range of plant pathogens subvert the ubiquitin-proteasome system to enhance their virulence. Here, we show that proteasome activity is strongly induced during basal defense in Arabidopsis (Arabidopsis thaliana). Mutant lines of the proteasome subunits RPT2a and RPN12a support increased bacterial growth of virulent Pseudomonas syringae pv tomato DC3000 (Pst) and Pseudomonas syringae pv maculicola ES4326. Both proteasome subunits are required for pathogen-associated molecular pattern-triggered immunity responses. Analysis of bacterial growth after a secondary infection of systemic leaves revealed that the establishment of systemic acquired resistance (SAR) is impaired in proteasome mutants, suggesting that the proteasome also plays an important role in defense priming and SAR. In addition, we show that Pst inhibits proteasome activity in a type III secretion-dependent manner. A screen for type III effector proteins from Pst for their ability to interfere with proteasome activity revealed HopM1, HopAO1, HopA1, and HopG1 as putative proteasome inhibitors. Biochemical characterization of HopM1 by mass spectrometry indicates that HopM1 interacts with several E3 ubiquitin ligases and proteasome subunits. This supports the hypothesis that HopM1 associates with the proteasome, leading to its inhibition. Thus, the proteasome is an essential component of pathogen-associated molecular pattern-triggered immunity and SAR, which is targeted by multiple bacterial effectors.}, language = {en} } @article{CwiekKupczynskaAltmannArendetal.2016, author = {´Cwiek-Kupczynska, Hanna and Altmann, Thomas and Arend, Daniel and Arnaud, Elizabeth and Chen, Dijun and Cornut, Guillaume and Fiorani, Fabio and Frohmberg, Wojciech and Junker, Astrid and Klukas, Christian and Lange, Matthias and Mazurek, Cezary and Nafissi, Anahita and Neveu, Pascal and van Oeveren, Jan and Pommier, Cyril and Poorter, Hendrik and Rocca-Serra, Philippe and Sansone, Susanna-Assunta and Scholz, Uwe and van Schriek, Marco and Seren, {\"U}mit and Usadel, Bjorn and Weise, Stephan and Kersey, Paul and Krajewski, Pawel}, title = {Measures for interoperability of phenotypic data: minimum information requirements and formatting}, series = {Plant Methods}, volume = {12}, journal = {Plant Methods}, publisher = {BioMed Central}, address = {London}, issn = {1746-4811}, doi = {10.1186/s13007-016-0144-4}, pages = {18}, year = {2016}, abstract = {Background: Plant phenotypic data shrouds a wealth of information which, when accurately analysed and linked to other data types, brings to light the knowledge about the mechanisms of life. As phenotyping is a field of research comprising manifold, diverse and time-consuming experiments, the findings can be fostered by reusing and combining existing datasets. Their correct interpretation, and thus replicability, comparability and interoperability, is possible provided that the collected observations are equipped with an adequate set of metadata. So far there have been no common standards governing phenotypic data description, which hampered data exchange and reuse. Results: In this paper we propose the guidelines for proper handling of the information about plant phenotyping experiments, in terms of both the recommended content of the description and its formatting. We provide a document called "Minimum Information About a Plant Phenotyping Experiment", which specifies what information about each experiment should be given, and a Phenotyping Configuration for the ISA-Tab format, which allows to practically organise this information within a dataset. We provide examples of ISA-Tab-formatted phenotypic data, and a general description of a few systems where the recommendations have been implemented. Conclusions: Acceptance of the rules described in this paper by the plant phenotyping community will help to achieve findable, accessible, interoperable and reusable data.}, language = {en} } @article{ZuehlkeRiebeBeitzetal.2016, author = {Z{\"u}hlke, Martin and Riebe, Daniel and Beitz, Toralf and L{\"o}hmannsr{\"o}ben, Hans-Gerd and Andreotti, Sandro and Reinert, Knut and Zenichowski, Karl and Diener, Marc}, title = {High-performance liquid chromatography with electrospray ionization ion mobility spectrometry: Characterization, data management, and applications}, series = {Journal of separation science}, volume = {39}, journal = {Journal of separation science}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1615-9306}, doi = {10.1002/jssc.201600749}, pages = {4756 -- 4764}, year = {2016}, abstract = {The combination of high-performance liquid chromatography and electrospray ionization ion mobility spectrometry facilitates the two-dimensional separation of complex mixtures in the retention and drift time plane. The ion mobility spectrometer presented here was optimized for flow rates customarily used in high-performance liquid chromatography between 100 and 1500 mu L/min. The characterization of the system with respect to such parameters as the peak capacity of each time dimension and of the 2D spectrum was carried out based on a separation of a pesticide mixture containing 24 substances. While the total ion current chromatogram is coarsely resolved, exhibiting coelutions for a number of compounds, all substances can be separately detected in the 2D plane due to the orthogonality of the separations in retention and drift dimensions. Another major advantage of the ion mobility detector is the identification of substances based on their characteristic mobilities. Electrospray ionization allows the detection of substances lacking a chromophore. As an example, the separation of a mixture of 18 amino acids is presented. A software built upon the free mass spectrometry package OpenMS was developed for processing the extensive 2D data. The different processing steps are implemented as separate modules which can be arranged in a graphic workflow facilitating automated processing of data.}, language = {en} } @article{ZoellerHolschneider2016, author = {Z{\"o}ller, Gert and Holschneider, Matthias}, title = {The Maximum Possible and the Maximum Expected Earthquake Magnitude for Production-Induced Earthquakes at the Gas Field in Groningen, The Netherlands}, series = {Bulletin of the Seismological Society of America}, volume = {106}, journal = {Bulletin of the Seismological Society of America}, publisher = {Seismological Society of America}, address = {Albany}, issn = {0037-1106}, doi = {10.1785/0120160220}, pages = {2917 -- 2921}, year = {2016}, abstract = {The Groningen gas field serves as a natural laboratory for production-induced earthquakes, because no earthquakes were observed before the beginning of gas production. Increasing gas production rates resulted in growing earthquake activity and eventually in the occurrence of the 2012M(w) 3.6 Huizinge earthquake. At least since this event, a detailed seismic hazard and risk assessment including estimation of the maximum earthquake magnitude is considered to be necessary to decide on the future gas production. In this short note, we first apply state-of-the-art methods of mathematical statistics to derive confidence intervals for the maximum possible earthquake magnitude m(max). Second, we calculate the maximum expected magnitude M-T in the time between 2016 and 2024 for three assumed gas-production scenarios. Using broadly accepted physical assumptions and 90\% confidence level, we suggest a value of m(max) 4.4, whereas M-T varies between 3.9 and 4.3, depending on the production scenario.}, language = {en} } @article{ZoellerHolschneider2016, author = {Z{\"o}ller, Gert and Holschneider, Matthias}, title = {The Earthquake History in a Fault Zone Tells Us Almost Nothing about m(max)}, series = {Seismological research letters}, volume = {87}, journal = {Seismological research letters}, publisher = {Seismological Society of America}, address = {Albany}, issn = {0895-0695}, doi = {10.1785/0220150176}, pages = {132 -- 137}, year = {2016}, abstract = {In the present study, we summarize and evaluate the endeavors from recent years to estimate the maximum possible earthquake magnitude m(max) from observed data. In particular, we use basic and physically motivated assumptions to identify best cases and worst cases in terms of lowest and highest degree of uncertainty of m(max). In a general framework, we demonstrate that earthquake data and earthquake proxy data recorded in a fault zone provide almost no information about m(max) unless reliable and homogeneous data of a long time interval, including several earthquakes with magnitude close to m(max), are available. Even if detailed earthquake information from some centuries including historic and paleoearthquakes are given, only very few, namely the largest events, will contribute at all to the estimation of m(max), and this results in unacceptably high uncertainties. As a consequence, estimators of m(max) in a fault zone, which are based solely on earthquake-related information from this region, have to be dismissed.}, language = {en} } @article{ZwickelKahlKlaffkeetal.2016, author = {Zwickel, Theresa and Kahl, Sandra M. and Klaffke, Horst and Rychlik, Michael and M{\"u}ller, Marina E. H.}, title = {Spotlight on the Underdogs-An Analysis of Underrepresented Alternaria Mycotoxins Formed Depending on Varying Substrate, Time and Temperature Conditions}, series = {Toxins}, volume = {8}, journal = {Toxins}, publisher = {MDPI}, address = {Basel}, issn = {2072-6651}, doi = {10.3390/toxins8110344}, pages = {570 -- 583}, year = {2016}, abstract = {Alternaria (A.) is a genus of widespread fungi capable of producing numerous, possibly health-endangering Alternaria toxins (ATs), which are usually not the focus of attention. The formation of ATs depends on the species and complex interactions of various environmental factors and is not fully understood. In this study the influence of temperature (7 degrees C, 25 degrees C), substrate (rice, wheat kernels) and incubation time (4, 7, and 14 days) on the production of thirteen ATs and three sulfoconjugated ATs by three different Alternaria isolates from the species groups A. tenuissima and A. infectoria was determined. High-performance liquid chromatography coupled with tandem mass spectrometry was used for quantification. Under nearly all conditions, tenuazonic acid was the most extensively produced toxin. At 25 degrees C and with increasing incubation time all toxins were formed in high amounts by the two A. tenuissima strains on both substrates with comparable mycotoxin profiles. However, for some of the toxins, stagnation or a decrease in production was observed from day 7 to 14. As opposed to the A. tenuissima strains, the A. infectoria strain only produced low amounts of ATs, but high concentrations of stemphyltoxin III. The results provide an essential insight into the quantitative in vitro AT formation under different environmental conditions, potentially transferable to different field and storage conditions.}, language = {en} } @misc{ZurnicHuetterRzehaetal.2016, author = {Zurnic, Irena and H{\"u}tter, Sylvia and Rzeha, Ute and Stanke, Nicole and Reh, Juliane and M{\"u}llers, Erik and Hamann, Martin V. and Kern, Tobias and Gerresheim, Gesche K. and Lindel, Fabian and Serrao, Erik and Lesbats, Paul and Engelman, Alan N. and Cherepanov, Peter and Lindemann, Dirk}, title = {Interactions of prototype foamy virus capsids with host cell polo-like kinases are important for efficient viral DNA integration}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe}, number = {580}, issn = {1866-8372}, doi = {10.25932/publishup-41131}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-411317}, pages = {36}, year = {2016}, abstract = {Unlike for other retroviruses, only a few host cell factors that aid the replication of foamy viruses (FVs) via interaction with viral structural components are known. Using a yeast-two-hybrid (Y2H) screen with prototype FV (PFV) Gag protein as bait we identified human polo-like kinase 2 (hPLK2), a member of cell cycle regulatory kinases, as a new interactor of PFV capsids. Further Y2H studies confirmed interaction of PFV Gag with several PLKs of both human and rat origin. A consensus Ser-Thr/Ser-Pro (S-T/S-P) motif in Gag, which is conserved among primate FVs and phosphorylated in PFV virions, was essential for recognition by PLKs. In the case of rat PLK2, functional kinase and polo-box domains were required for interaction with PFV Gag. Fluorescently-tagged PFV Gag, through its chromatin tethering function, selectively relocalized ectopically expressed eGFP-tagged PLK proteins to mitotic chromosomes in a Gag STP motif-dependent manner, confirming a specific and dominant nature of the Gag-PLK interaction in mammalian cells. The functional relevance of the Gag-PLK interaction was examined in the context of replication-competent FVs and single-round PFV vectors. Although STP motif mutated viruses displayed wild type (wt) particle release, RNA packaging and intra-particle reverse transcription, their replication capacity was decreased 3-fold in single-cycle infections, and up to 20-fold in spreading infections over an extended time period. Strikingly similar defects were observed when cells infected with single-round wt Gag PFV vectors were treated with a pan PLK inhibitor. Analysis of entry kinetics of the mutant viruses indicated a post-fusion defect resulting in delayed and reduced integration, which was accompanied with an enhanced preference to integrate into heterochromatin. We conclude that interaction between PFV Gag and cellular PLK proteins is important for early replication steps of PFV within host cells.}, language = {en} } @article{ZurnicHuetterRzehaetal.2016, author = {Zurnic, Irena and H{\"u}tter, Sylvia and Rzeha, Ute and Stanke, Nicole and Reh, Juliane and M{\"u}llers, Erik and Hamann, Martin V. and Kern, Tobias and Gerresheim, Gesche K. and Lindel, Fabian and Serrao, Erik and Lesbats, Paul and Engelman, Alan N. and Cherepanov, Peter and Lindemann, Dirk}, title = {Interactions of Prototype Foamy Virus Capsids with Host Cell Polo-Like Kinases Are Important for Efficient Viral DNA Integration}, series = {PLoS Pathogens}, volume = {12}, journal = {PLoS Pathogens}, publisher = {PLoS}, address = {San Fransisco}, issn = {1553-7366}, doi = {10.1371/journal.ppat.1005860}, pages = {36}, year = {2016}, abstract = {Unlike for other retroviruses, only a few host cell factors that aid the replication of foamy viruses (FVs) via interaction with viral structural components are known. Using a yeast-two-hybrid (Y2H) screen with prototype FV (PFV) Gag protein as bait we identified human polo-like kinase 2 (hPLK2), a member of cell cycle regulatory kinases, as a new interactor of PFV capsids. Further Y2H studies confirmed interaction of PFV Gag with several PLKs of both human and rat origin. A consensus Ser-Thr/Ser-Pro (S-T/S-P) motif in Gag, which is conserved among primate FVs and phosphorylated in PFV virions, was essential for recognition by PLKs. In the case of rat PLK2, functional kinase and polo-box domains were required for interaction with PFV Gag. Fluorescently-tagged PFV Gag, through its chromatin tethering function, selectively relocalized ectopically expressed eGFP-tagged PLK proteins to mitotic chromosomes in a Gag STP motif-dependent manner, confirming a specific and dominant nature of the Gag-PLK interaction in mammalian cells. The functional relevance of the Gag-PLK interaction was examined in the context of replication-competent FVs and single-round PFV vectors. Although STP motif mutated viruses displayed wild type (wt) particle release, RNA packaging and intra-particle reverse transcription, their replication capacity was decreased 3-fold in single-cycle infections, and up to 20-fold in spreading infections over an extended time period. Strikingly similar defects were observed when cells infected with single-round wt Gag PFV vectors were treated with a pan PLK inhibitor. Analysis of entry kinetics of the mutant viruses indicated a post-fusion defect resulting in delayed and reduced integration, which was accompanied with an enhanced preference to integrate into heterochromatin. We conclude that interaction between PFV Gag and cellular PLK proteins is important for early replication steps of PFV within host cells.}, language = {en} } @article{ZscheygeWeicker2016, author = {Zscheyge, Oliver and Weicker, Karsten}, title = {Werkzeugunterst{\"u}tzung bei der Vermittlung der Grundlagen wissenschaftlichen Schreibens}, series = {Commentarii informaticae didacticae (CID)}, journal = {Commentarii informaticae didacticae (CID)}, number = {10}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-376-3}, issn = {1868-0844}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-94814}, pages = {57 -- 68}, year = {2016}, abstract = {Der Unterricht großer Studierendengruppen im wissenschaftlichen Schreiben birgt vielf{\"a}ltige organisatorische Herausforderungen und eine zeitintensive Betreuung durch die Dozenten. Diese Arbeit stellt ein Lehrkonzept mit Peer-Reviews vor, in dem das Feedback der Peers durch eine automatisierte Analyse erg{\"a}nzt wird. Die Software Confopy liefert metrik- und strukturbasierte Hinweise f{\"u}r die Verbesserung des wissenschaftlichen Schreibstils. Der Nutzen von Confopy wird an 47 studentischen Arbeiten in Draft- und Final-Version illustriert.}, language = {de} }