@phdthesis{Kamranfar2015,
  author    = {Kamranfar, Iman},
  title     = {Functional analysis of gene regulatory networks controlled by stress responsive transcription factors in Arabidopsis thaliana},
  school      = {Universit{\"a}t Potsdam},
  pages     = {151},
  year      = {2015},
  language  = {en}
}
@phdthesis{Sauter2015,
  author    = {Sauter, Tilman},
  title     = {Function by structure},
  school      = {Universit{\"a}t Potsdam},
  pages     = {166},
  year      = {2015},
  language  = {en}
}
@phdthesis{Olszewska2015,
  author    = {Olszewska, Agata},
  title     = {Forming magnetic chain with the help of biological organisms},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-89767},
  school      = {Universit{\"a}t Potsdam},
  pages     = {101},
  year      = {2015},
  abstract  = {Magnetite nanoparticles and their assembly comprise a new area of development for new technologies. The magnetic particles can interact and assemble in chains or networks. Magnetotactic bacteria are one of the most interesting microorganisms, in which the assembly of nanoparticles occurs. These microorganisms are a heterogeneous group of gram negative prokaryotes, which all show the production of special magnetic organelles called magnetosomes, consisting of a magnetic nanoparticle, either magnetite (Fe3O4) or greigite (Fe3S4), embedded in a membrane. The chain is assembled along an actin-like scaffold made of MamK protein, which makes the magnetosomes to arrange in mechanically stable chains. The chains work as a compass needle in order to allow cells to orient and swim along the magnetic field of the Earth. The formation of magnetosomes is known to be controlled at the molecular level. The physico-chemical conditions of the surrounding environment also influence biomineralization. The work presented in this manuscript aims to understand how such external conditions, in particular the extracellular oxidation reduction potential (ORP) influence magnetite formation in the strain Magnetospirillum magneticum AMB-1. A controlled cultivation of the microorganism was developed in a bioreactor and the formation of magnetosomes was characterized. Different techniques have been applied in order to characterize the amount of iron taken up by the bacteria and in consequence the size of magnetosomes produced at different ORP conditions. By comparison of iron uptake, morphology of bacteria, size and amount of magnetosomes per cell at different ORP, the formation of magnetosomes was inhibited at ORP 0 mV, whereas reduced conditions, ORP - 500 mV facilitate biomineralization process. Self-assembly of magnetosomes occurring in magnetotactic bacteria became an inspiration to learn from nature and to construct nanoparticles assemblies by using the bacteriophage M13 as a template. The M13 bacteriophage is an 800 nm long filament with encapsulated single-stranded DNA that has been recently used as a scaffold for nanoparticle assembly. I constructed two types of assemblies based on bacteriophages and magnetic nanoparticles. A chain - like assembly was first formed where magnetite nanoparticles are attached along the phage filament. A sperm - like construct was also built with a magnetic head and a tail formed by phage filament. The controlled assembly of magnetite nanoparticles on the phage template was possible due to two different mechanism of nanoparticle assembly. The first one was based on the electrostatic interactions between positively charged polyethylenimine coated magnetite nanoparticles and negatively charged phages. The second phage -nanoparticle assembly was achieved by bioengineered recognition sites. A mCherry protein is displayed on the phage and is was used as a linker to a red binding nanobody (RBP) that is fused to the one of the proteins surrounding the magnetite crystal of a magnetosome. Both assemblies were actuated in water by an external magnetic field showing their swimming behavior and potentially enabling further usage of such structures for medical applications. The speed of the phage - nanoparticles assemblies are relatively slow when compared to those of microswimmers previously published. However, only the largest phage-magnetite assemblies could be imaged and it is therefore still unclear how fast these structures can be in their smaller version.},
  language  = {en}
}
@phdthesis{Mengel2015,
  author    = {Mengel, Matthias},
  title     = {Forcing Earth's sea level},
  school      = {Universit{\"a}t Potsdam},
  pages     = {173},
  year      = {2015},
  language  = {en}
}
@phdthesis{Lischke2015,
  author    = {Lischke, Betty},
  title     = {Food web regulation under different forcing regimes in shallow lakes},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-89149},
  school      = {Universit{\"a}t Potsdam},
  pages     = {131},
  year      = {2015},
  abstract  = {The standing stock and production of organismal biomass depends strongly on the organisms' biotic environment, which arises from trophic and non-trophic interactions among them. The trophic interactions between the different groups of organisms form the food web of an ecosystem, with the autotrophic and bacterial production at the basis and potentially several levels of consumers on top of the producers. Feeding interactions can regulate communities either by severe grazing pressure or by shortage of resources or prey production, termed top-down and bottom-up control, respectively. The limitations of all communities conglomerate in the food web regulation, which is subject to abiotic and biotic forcing regimes arising from external and internal constraints. This dissertation presents the effects of alterations in two abiotic, external forcing regimes, terrestrial matter input and long-lasting low temperatures in winter. Diverse methodological approaches, a complex ecosystem model study and the analysis of two whole-lake measurements, were performed to investigate effects for the food web regulation and the resulting consequences at the species, community and ecosystem scale. Thus, all types of organisms, autotrophs and heterotrophs, at all trophic levels were investigated to gain a comprehensive overview of the effects of the two mentioned altered forcing regimes. In addition, an extensive evaluation of the trophic interactions and resulting carbon fluxes along the pelagic and benthic food web was performed to display the efficiencies of the trophic energy transfer within the food webs. All studies were conducted in shallow lakes, which is worldwide the most abundant type of lakes. The specific morphology of shallow lakes allows that the benthic production contributes substantially to the whole-lake production. Further, as shallow lakes are often small they are especially sensitive to both, changes in the input of terrestrial organic matter and the atmospheric temperature. Another characteristic of shallow lakes is their appearance in alternative stable states. They are either in a clear-water or turbid state, where macrophytes and phytoplankton dominate, respectively. Both states can stabilize themselves through various mechanisms. These two alternative states and stabilizing mechanisms are integrated in the complex ecosystem model PCLake, which was used to investigate the effects of the enhanced terrestrial particulate organic matter (t-POM) input to lakes. The food web regulation was altered by three distinct pathways: (1) Zoobenthos received more food, increased in biomass which favored benthivorous fish and those reduced the available light due to bioturbation. (2) Zooplankton substituted autochthonous organic matter in their diet by suspended t-POM, thus the autochthonous organic matter remaining in the water reduced its transparency. (3) T-POM suspended into the water and reduced directly the available light. As macrophytes are more light-sensitive than phytoplankton they suffered the most from the lower transparency. Consequently, the resilience of the clear-water state was reduced by enhanced t-POM inputs, which makes the turbid state more likely at a given nutrient concentration. In two subsequent winters long-lasting low temperatures and a concurrent long duration of ice coverage was observed which resulted in low overall adult fish biomasses in the two study lakes - Schulzensee and Gollinsee, characterized by having and not having submerged macrophytes, respectively. Before the partial winterkill of fish Schulzensee allowed for a higher proportion of piscivorous fish than Gollinsee. However, the partial winterkill of fish aligned both communities as piscivorous fish are more sensitive to low oxygen concentrations. Young of the year fish benefitted extremely from the absence of adult fish due to lower predation pressure. Therefore, they could exert a strong top-down control on crustaceans, which restructured the entire zooplankton community leading to low crustacean biomasses and a community composition characterized by copepodites and nauplii. As a result, ciliates were released from top-down control, increased to high biomasses compared to lakes of various trophic states and depths and dominated the zooplankton community. While being very abundant in the study lakes and having the highest weight specific grazing rates among the zooplankton, ciliates exerted potentially a strong top-down control on small phytoplankton and particle-attached bacteria. This resulted in a higher proportion of large phytoplankton compared to other lakes. Additionally, the phytoplankton community was evenly distributed presumably due to the numerous fast growing and highly specific ciliate grazers. Although, the pelagic food web was completely restructured after the subsequent partial winterkills of fish, both lakes were resistant to effects of this forcing regime at the ecosystem scale. The consistently high predation pressure on phytoplankton prevented that Schulzensee switched from the clear-water to the turbid state. Further mechanisms, which potentially stabilized the clear-water state, were allelopathic effects by macrophytes and nutrient limitation in summer. The pelagic autotrophic and bacterial production was an order of magnitude more efficient transferred to animal consumers than the respective benthic production, despite the alterations of the food web structure after the partial winterkill of fish. Thus, the compiled mass-balanced whole-lake food webs suggested that the benthic bacterial and autotrophic production, which exceeded those of the pelagic habitat, was not used by animal consumers. This holds even true if the food quality, additional consumers such as ciliates, benthic protozoa and meiobenthos, the pelagic-benthic link and the potential oxygen limitation of macrobenthos were considered. Therefore, low benthic efficiencies suggest that lakes are primarily pelagic systems at least at the animal consumer level. Overall, this dissertation gives insights into the regulation of organism groups in the pelagic and benthic habitat at each trophic level under two different forcing regimes and displays the efficiency of the carbon transfer in both habitats. The results underline that the alterations of external forcing regimes affect all hierarchical level including the ecosystem.},
  language  = {en}
}
@phdthesis{Pradhan2015,
  author    = {Pradhan, Prajal},
  title     = {Food demand and supply under global change},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-77849},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xvi, 141},
  year      = {2015},
  abstract  = {Anthropogenic activities have transformed the Earth's environment, not only on local level, but on the planetary-scale causing global change. Besides industrialization, agriculture is a major driver of global change. This change in turn impairs the agriculture sector, reducing crop yields namely due to soil degradation, water scarcity, and climate change. However, this is a more complex issue than it appears. Crop yields can be increased by use of agrochemicals and fertilizers which are mainly produced by fossil energy. This is important to meet the increasing food demand driven by global demographic change, which is further accelerated by changes in regional lifestyles. In this dissertation, we attempt to address this complex problem exploring agricultural potential globally but on a local scale. For this, we considered the influence of lifestyle changes (dietary patterns) as well as technological progress and their effects on climate change, mainly greenhouse gas (GHG) emissions. Furthermore, we examined options for optimizing crop yields in the current cultivated land with the current cropping patterns by closing yield gaps. Using this, we investigated in a five-minute resolution the extent to which food demand can be met locally, and/or by regional and/or global trade. Globally, food consumption habits are shifting towards calorie rich diets. Due to dietary shifts combined with population growth, the global food demand is expected to increase by 60-110\% between 2005 and 2050. Hence, one of the challenges to global sustainability is to meet the growing food demand, while at the same time, reducing agricultural inputs and environmental consequences. In order to address the above problem, we used several freely available datasets and applied multiple interconnected analytical approaches that include artificial neural network, scenario analysis, data aggregation and harmonization, downscaling algorithm, and cross-scale analysis. Globally, we identified sixteen dietary patterns between 1961 and 2007 with food intakes ranging from 1,870 to 3,400 kcal/cap/day. These dietary patterns also reflected changing dietary habits to meat rich diets worldwide. Due to the large share of animal products, very high calorie diets that are common in the developed world, exhibit high total per capita emissions of 3.7-6.1 kg CO2eq./day. This is higher than total per capita emissions of 1.4-4.5 kg CO2eq./day associated with low and moderate calorie diets that are common in developing countries. Currently, 40\% of the global crop calories are fed to livestock and the feed calorie use is four times the produced animal calories. However, these values vary from less than 1 kcal to greater 10 kcal around the world. On the local and national scale, we found that the local and national food production could meet demand of 1.9 and 4.4 billion people in 2000, respectively. However, 1 billion people from Asia and Africa require intercontinental agricultural trade to meet their food demand. Nevertheless, these regions can become food self-sufficient by closing yield gaps that require location specific inputs and agricultural management strategies. Such strategies include: fertilizers, pesticides, soil and land improvement, management targeted on mitigating climate induced yield variability, and improving market accessibility. However, closing yield gaps in particular requires global N-fertilizer application to increase by 45-73\%, P2O5 by 22-46\%, and K2O by 2-3 times compare to 2010. Considering population growth, we found that the global agricultural GHG emissions will approach 7 Gt CO2eq./yr by 2050, while the global livestock feed demand will remain similar to 2000. This changes tremendously when diet shifts are also taken into account, resulting in GHG emissions of 20 Gt CO2eq./yr and an increase of 1.3 times in the crop-based feed demand between 2000 and 2050. However, when population growth, diet shifts, and technological progress by 2050 were considered, GHG emissions can be reduced to 14 Gt CO2eq./yr and the feed demand to nearly 1.8 times compare to that in 2000. Additionally, our findings shows that based on the progress made in closing yield gaps, the number of people depending on international trade can vary between 1.5 and 6 billion by 2050. In medium term, this requires additional fossil energy. Furthermore, climate change, affecting crop yields, will increase the need for international agricultural trade by 4\% to 16\%. In summary, three general conclusions are drawn from this dissertation. First, changing dietary patterns will significantly increase crop demand, agricultural GHG emissions, and international food trade in the future when compared to population growth only. Second, such increments can be reduced by technology transfer and technological progress that will enhance crop yields, decrease agricultural emission intensities, and increase livestock feed conversion efficiencies. Moreover, international trade dependency can be lowered by consuming local and regional food products, by producing diverse types of food, and by closing yield gaps. Third, location specific inputs and management options are required to close yield gaps. Sustainability of such inputs and management largely depends on which options are chosen and how they are implemented. However, while every cultivated land may not need to attain its potential yields to enable food security, closing yield gaps only may not be enough to achieve food self-sufficiency in some regions. Hence, a combination of sustainable implementations of agricultural intensification, expansion, and trade as well as shifting dietary habits towards a lower share of animal products is required to feed the growing population.},
  language  = {en}
}
@phdthesis{Papendiek2015,
  author    = {Papendiek, Franka},
  title     = {Fodder legumes for Green Biorefineries},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-87198},
  school      = {Universit{\"a}t Potsdam},
  pages     = {XI, 111},
  year      = {2015},
  abstract  = {Peak oil is forcing our society to shift from fossil to renewable resources. However, such renewable resources are also scarce, and they too must be used in the most efficient and sustainable way possible. Biorefining is a concept that represents both resource efficiency and sustainability. This approach initiates a cascade use, which means food and feed production before material use, and an energy-related use at the end of the value-added chain. However, sustainability should already start in the fields, on the agricultural side, where the industrially-used biomass is produced. Therefore, the aim of my doctoral thesis is to analyse the sustainable feedstock supply for biorefineries. In contrast to most studies on biorefineries, I focus on the sustainable provision of feedstock and not on the bioengineering processing of whatever feedstock is available. Grasslands provide a high biomass potential. They are often inefficiently used, so a new utilisation concept based on the biorefining approach can increase the added value from grasslands. Fodder legumes from temporary and permanent grasslands were chosen for this study. Previous research shows that they are a promising feedstock for industrial uses, and their positive environmental impact is an important byproduct to promote sustainable agricultural production systems. Green Biorefineries are a class of biorefineries that use fresh green biomass, such as grasses or fodder legumes, as feedstock. After fractionation, an organic solution (press juice) forms; this is used for the production of organic acids, chemicals and extracts, as well as fertilisers. A fibre component (press cake) is also created to produce feed, biomaterials and biogas. This thesis examines a specific value chain, using alfalfa and clover/grass as feedstock and generating lactic acid and one type of cattle feed from it. The research question is if biomass production needs to be adapted for the utilisation of fodder legumes in the Green Biorefinery approach. I have attempted to give a holistic analysis of cultivation, processing and utilisation of two specific grassland crops. Field trials with alfalfa and clover/grass at different study sites were carried out to obtain information on biomass quality and quantity depending on the crop, study site and harvest time. The fresh biomass was fractionated with a screw press and the composition of press juices and cakes was analysed. Fermentation experiments took place to determine the usability of press juices for lactic acid production. The harvest time is not of high importance for the quality of press juices as a fermentation medium. For permanent grasslands, late cuts, often needed for reasons of nature conservation, are possible without a major influence on feedstock quality. The press cakes were silaged for feed-value determination. Following evidence that both intermediate products are suitable feedstocks in the Green Biorefinery approach, I developed a cost-benefit analysis, comparing different production scenarios on a farm. Two standard crop rotations for Brandenburg, producing either only market crops or market crops and fodder legumes for ruminant feed production, were compared to a system that uses the cultivated fodder legumes for the Green Biorefinery value chain instead of only feed production. Timely processing of the raw material is important to maintain quality for industrial uses, so on-site processing at the farm is assumed in Green Biorefinery scenario. As a result, more added value stays in the rural area. Two farm sizes, common for many European regions, were chosen to examine the influence of scale. The cost site of farmers has also been analysed in detail to assess which farm characteristics make production of press juices for biochemical industries viable. Results show that for large farm sizes in particular, the potential profits are high. Additionally, the wider spectrum of marketable products generates new sources of income for farmers. The holistic analysis of the supply chain provides evidence that the cultivation processes for fodder legumes do not need to be adapted for use in Green Biorefineries. In fact, the new utilisation approach even widens the cultivation and processing spectrum and can increase economic viability of fodder legume production in conventional farming.},
  language  = {en}
}
@phdthesis{Grubic2015,
  author    = {Grubic, Mira},
  title     = {Focus and alternative sensitivity in Ngamo (West-Chadic)},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-81666},
  school      = {Universit{\"a}t Potsdam},
  year      = {2015},
  abstract  = {The main research question of this thesis concerns the relation between focus interpretation, focus realization, and association with focus in the West Chadic language Ngamo. Concerning the relation between focus realization and interpretation, this thesis contributes to the question, cross-linguistically, what factors influence a marked realization of the focus/background distinction. There is background-marking rather than focus-marking in Ngamo, and the background marker is related to the definite determiner in the language. Using original fieldwork data as a basis, a formal semantic analysis of the background marker as a definite determiner of situations is proposed. Concerning the relation between focus and association with focus, the thesis adds to the growing body of crosslinguistic evidence that not all so-called focus-sensitive operators always associate with focus. The thesis shows that while the exclusive particle yak('i) (= "only") in Ngamo conventionally associates with focus, the particles har('i) (= "even, as far as, until, already"), and ke('e) (= "also, and") do not. The thesis provides an analysis of these phenomena in a situation semantic framework.},
  language  = {en}
}
@phdthesis{Trauth2015,
  author    = {Trauth, Nico},
  title     = {Flow and reactive transport modeling at the stream-groundwater interface},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-82748},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xv, 103},
  year      = {2015},
  abstract  = {Stream water and groundwater are important fresh water resources but their water quality is deteriorated by harmful solutes introduced by human activities. The interface between stream water and the subsurface water is an important zone for retention, transformation and attenuation of these solutes. Streambed structures enhance these processes by increased water and solute exchange across this interface, denoted as hyporheic exchange. This thesis investigates the influence of hydrological and morphological factors on hyporheic water and solute exchange as well as redox-reactions in fluvial streambed structures on the intermediate scale (10-30m). For this purpose, a three-dimensional numerical modeling approach for coupling stream water flow with porous media flow is used. Multiple steady state stream water flow scenarios over different generic pool-riffle morphologies and a natural in-stream gravel bar are simulated by a computational fluid dynamics code that provides the hydraulic head distribution at the streambed. These heads are subsequently used as the top boundary condition of a reactive transport groundwater model of the subsurface beneath the streambed. Ambient groundwater that naturally interacts with the stream water is considered in scenarios of different magnitudes of downwelling stream water (losing case) and upwelling groundwater (gaining case). Also, the neutral case, where stream stage and groundwater levels are balanced is considered. Transport of oxygen, nitrate and dissolved organic carbon and their reaction by aerobic respiration and denitrification are modeled. The results show that stream stage and discharge primarily induce hyporheic exchange flux and solute transport with implications for specific residence times and reactions at both the fully and partially submerged structures. Gaining and losing conditions significantly diminish the extent of the hyporheic zone, the water exchange flux, and shorten residence times for both the fully and partially submerged structures. With increasing magnitude of gaining or losing conditions, these metrics exponentially decrease. Stream water solutes are transported mainly advectively into the hyporheic zone and hence their influx corresponds directly to the infiltrating water flux. Aerobic respiration takes place in the shallow streambed sediments, coinciding to large parts with the extent of the hyporheic exchange flow. Denitrification occurs mainly as a "reactive fringe" surrounding the aerobic zone, where oxygen concentration is low and still a sufficient amount of stream water carbon source is available. The solute consumption rates and the efficiency of the aerobic and anaerobic reactions depend primarily on the available reactive areas and the residence times, which are both controlled by the interplay between hydraulic head distribution at the streambed and the gradients between stream stage and ambient groundwater. Highest solute consumption rates can be expected under neutral conditions, where highest solute flux, longest residence times and largest extent of the hyporheic exchange occur. The results of this thesis show that streambed structures on the intermediate scale have a significant potential to contribute to a net solute turnover that can support a healthy status of the aquatic ecosystem.},
  language  = {en}
}
@phdthesis{Aich2015,
  author    = {Aich, Valentin},
  title     = {Floods in the Niger River Basin in the face of global change},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-91577},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xxi, 275},
  year      = {2015},
  abstract  = {In the last decade, the number and dimensions of catastrophic flooding events in the Niger River Basin (NRB) have markedly increased. Despite the devastating impact of the floods on the population and the mainly agriculturally based economy of the riverine nations, awareness of the hazards in policy and science is still low. The urgency of this topic and the existing research deficits are the motivation for the present dissertation. The thesis is an initial detailed assessment of the increasing flood risk in the NRB. The research strategy is based on four questions regarding (1) features of the change in flood risk, (2) reasons for the change in the flood regime, (3) expected changes of the flood regime given climate and land use changes, and (4) recommendations from previous analysis for reducing the flood risk in the NRB. The question examining the features of change in the flood regime is answered by means of statistical analysis. Trend, correlation, changepoint, and variance analyses show that, in addition to the factors exposure and vulnerability, the hazard itself has also increased significantly in the NRB, in accordance with the decadal climate pattern of West Africa. The northern arid and semi-arid parts of the NRB are those most affected by the changes. As potential reasons for the increase in flood magnitudes, climate and land use changes are attributed by means of a hypothesis-testing framework. Two different approaches, based on either data analysis or simulation, lead to similar results, showing that the influence of climatic changes is generally larger compared to that of land use changes. Only in the dry areas of the NRB is the influence of land use changes comparable to that of climatic alterations. Future changes of the flood regime are evaluated using modelling results. First ensembles of statistically and dynamically downscaled climate models based on different emission scenarios are analyzed. The models agree with a distinct increase in temperature. The precipitation signal, however, is not coherent. The climate scenarios are used to drive an eco-hydrological model. The influence of climatic changes on the flood regime is uncertain due to the unclear precipitation signal. Still, in general, higher flood peaks are expected. In a next step, effects of land use changes are integrated into the model. Different scenarios show that regreening might help to reduce flood peaks. In contrast, an expansion of agriculture might enhance the flood peaks in the NRB. Similarly to the analysis of observed changes in the flood regime, the impacts of climate- and land use changes for the future scenarios are also most severe in the dry areas of the NRB. In order to answer the final research question, the results of the above analysis are integrated into a range of recommendations for science and policy on how to reduce flood risk in the NRB. The main recommendations include a stronger consideration of the enormous natural climate variability in the NRB and a focus on so called "no-regret" adaptation strategies which account for high uncertainty, as well as a stronger consideration of regional differences. Regarding the prevention and mitigation of catastrophic flooding, the most vulnerable and sensitive areas in the basin, the arid and semi-arid Sahelian and Sudano-Sahelian regions, should be prioritized. Eventually, an active, science-based and science-guided flood policy is recommended. The enormous population growth in the NRB in connection with the expected deterioration of environmental and climatic conditions is likely to enhance the region´s vulnerability to flooding. A smart and sustainable flood policy can help mitigate these negative impacts of flooding on the development of riverine societies in West Africa.},
  language  = {en}
}
@phdthesis{Ploetner2015,
  author    = {Pl{\"o}tner, Bj{\"o}rn},
  title     = {F2 hybrid chlorosis in a cross between the Arabidopsis thaliana accessions Shahdara and Lovvik-5},
  school      = {Universit{\"a}t Potsdam},
  pages     = {99},
  year      = {2015},
  language  = {en}
}
@phdthesis{Metzner2015,
  author    = {Metzner, Paul-Philipp},
  title     = {Eye movements and brain responses in natural reading},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-82806},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xv, 160},
  year      = {2015},
  abstract  = {Intuitively, it is clear that neural processes and eye movements in reading are closely connected, but only few studies have investigated both signals simultaneously. Instead, the usual approach is to record them in separate experiments and to subsequently consolidate the results. However, studies using this approach have shown that it is feasible to coregister eye movements and EEG in natural reading and contributed greatly to the understanding of oculomotor processes in reading. The present thesis builds upon that work, assessing to what extent coregistration can be helpful for sentence processing research. In the first study, we explore how well coregistration is suited to study subtle effects common to psycholinguistic experiments by investigating the effect of distance on dependency resolution. The results demonstrate that researchers must improve the signal-to-noise ratio to uncover more subdued effects in coregistration. In the second study, we compare oscillatory responses in different presentation modes. Using robust effects from world knowledge violations, we show that the generation and retrieval of memory traces may differ between natural reading and word-by-word presentation. In the third study, we bridge the gap between our knowledge of behavioral and neural responses to integration difficulties in reading by analyzing the EEG in the context of regressive saccades. We find the P600, a neural indicator of recovery processes, when readers make a regressive saccade in response to integration difficulties. The results in the present thesis demonstrate that coregistration can be a useful tool for the study of sentence processing. However, they also show that it may not be suitable for some questions, especially if they involve subtle effects.},
  language  = {en}
}
@phdthesis{Kaempf2015,
  author    = {K{\"a}mpf, Lucas},
  title     = {Extreme events in geoarchives},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-85961},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xii, 94},
  year      = {2015},
  abstract  = {A main limitation in the field of flood hydrology is the short time period covered by instrumental flood time series, rarely exceeding more than 50 to 100 years. However, climate variability acts on short to millennial time scales and identifying causal linkages to extreme hydrological events requires longer datasets. To extend instrumental flood time series back in time, natural geoarchives are increasingly explored as flood recorders. Therefore, annually laminated (varved) lake sediments seem to be the most suitable archives since (i) lake basins act as natural sediment traps in the landscape continuously recording land surface processes including floods and (ii) individual flood events are preserved as detrital layers intercalated in the varved sediment sequence and can be dated with seasonal precision by varve counting. The main goal of this thesis is to improve the understanding about hydrological and sedimentological processes leading to the formation of detrital flood layers and therewith to contribute to an improved interpretation of lake sediments as natural flood archives. This goal was achieved in two ways: first, by comparing detrital layers in sediments of two dissimilar peri-Alpine lakes, Lago Maggiore in Northern Italy and Mondsee in Upper Austria, with local instrumental flood data and, second, by tracking detrital layer formation during floods by a combined hydro-sedimentary monitoring network at Lake Mondsee spanning from the rain fall to the deposition of detrital sediment at the lake floor. Successions of sub-millimetre to 17 mm thick detrital layers were detected in sub-recent lake sediments of the Pallanza Basin in the western part of Lago Maggiore (23 detrital layers) and Lake Mondsee (23 detrital layers) by combining microfacies and high-resolution micro X-ray fluorescence scanning techniques (µ-XRF). The detrital layer records were dated by detailed intra-basin correlation to a previously dated core sequence in Lago Maggiore and varve counting in Mondsee. The intra-basin correlation of detrital layers between five sediment cores in Lago Maggiore and 13 sediment cores in Mondsee allowed distinguishing river runoff events from local erosion. Moreover, characteristic spatial distribution patterns of detrital flood layers revealed different depositional processes in the two dissimilar lakes, underflows in Lago Maggiore as well as under- and interflows in Mondsee. Comparisons with runoff data of the main tributary streams, the Toce River at Lago Maggiore and the Griesler Ache at Mondsee, revealed empirical runoff thresholds above which the deposition of a detrital layer becomes likely. Whereas this threshold is the same for the whole Pallanza Basin in Lago Maggiore (600 m3s-1 daily runoff), it varies within Lake Mondsee. At proximal locations close to the river inflow detrital layer deposition requires floods exceeding a daily runoff of 40 m3s-1, whereas at a location 2 km more distal an hourly runoff of 80 m3s-1 and at least 2 days with runoff above 40 m3s-1 are necessary. A relation between the thickness of individual deposits and runoff amplitude of the triggering events is apparent for both lakes but is obviously further influenced by variable influx and lake internal distribution of detrital sediment. To investigate processes of flood layer formation in lake sediments, hydro-sedimentary dynamics in Lake Mondsee and its main tributary stream, Griesler Ache, were monitored from January 2011 to December 2013. Precipitation, discharge and turbidity were recorded continuously at the rivers outlet to the lake and compared to sediment fluxes trapped close to the lake bottom on a basis of three to twelve days and on a monthly basis in three different water depths at two locations in the lake basin, in a distance of 0.9 (proximal) and 2.8 km (distal) to the Griesler Ache inflow. Within the three-year observation period, 26 river floods of different amplitude (10-110 m3s-1) were recorded resulting in variable sediment fluxes to the lake (4-760 g m-2d-1). Vertical and lateral variations in flood-related sedimentation during the largest floods indicate that interflows are the main processes of lake internal sediment transport in Lake Mondsee. The comparison of hydrological and sedimentological data revealed (i) a rapid sedimentation within three days after the peak runoff in the proximal and within six to ten days in the distal lake basin, (ii) empirical runoff thresholds for triggering sediment flux at the lake floor increasing from the proximal (20 m3s-1) to the distal lake basin (30 m3s-1) and (iii) factors controlling the amount of detrital sediment deposition at a certain location in the lake basin. The total influx of detrital sediment is mainly driven by runoff amplitude, catchment sediment availability and episodic sediment input by local sediment sources. A further role plays the lake internal sediment distribution which is not the same for each event but is favoured by flood duration and the existence of a thermocline and, therewith, the season in which a flood occurred. In summary, the studies reveal a high sensitivity of lake sediments to flood events of different intensity. Certain runoff amplitudes are required to supply enough detrital material to form a visible detrital layer at the lake floor. Reasonable are positive feedback mechanisms between rainfall, runoff, erosion, fluvial sediment transport capacity and lake internal sediment distribution. Therefore, runoff thresholds for detrital layer formation are site-specific due to different lake-catchment characteristics. However, the studies also reveal that flood amplitude is not the only control for the amount of deposited sediment at a certain location in the lake basin even for the strongest flood events. The sediment deposition is rather influenced by a complex interaction of catchment and in-lake processes. This means that the coring location within a lake basin strongly determines the significance of a flood layer record. Moreover, the results show that while lake sediments provide ideal archives for reconstructing flood frequencies, the reconstruction of flood amplitudes is a more complex issue and requires detailed knowledge about relevant catchment and in-lake sediment transport and depositional processes.},
  language  = {en}
}
@phdthesis{Hogenacker2015,
  author    = {Hogenacker, Jens},
  title     = {Essays on the transition from unemployment to employment with a special emphasis on start-up subsidies in Germany},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-87464},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xvi, 272},
  year      = {2015},
  abstract  = {The promotion of self-employment as part of active labor market policies is considered to be one of the most important unemployment support schemes in Germany. Against this background the main part of this thesis contributes to the evaluation of start-up support schemes within ALMP. Chapter 2 and 4 focus on the evaluation of the New Start-up Subsidy (NSUS, Gr{\"u}ndungszuschuss) in its first version (from 2006 to the end of 2011). The chapters offer an advancement of the evaluation of start-up subsidies in Germany, and are based on a novel data set of administrative data from the Federal Employment Agency that was enriched with information from a telephone survey. Chapter 2 provides a thorough descriptive analysis of the NSUS that consists of two parts. First, the participant structure of the program is compared with the one of two former programs. In a second step, the study conducts an in-depth characterization of the participants of the NSUS focusing on founding motives, the level of start-up capital and equity used as well as the sectoral distribution of the new business. Furthermore, the business survival, income situation of founders and job creation by the new businesses is analyzed during a period of 19 months after start-up. The contribution of Chapter 4 is to introduce a new explorative data set that allows comparing subsidized start-ups out of unemployment with non-subsidized business start-ups that were founded by individuals who were not unemployed at the time of start-up. Because previous evaluation studies commonly used eligible non-participants amongst the unemployed as control group to assess the labor market effects of the start-up subsidies, the corresponding results hence referred to the effectiveness of the ALMP measure, but could not address the question whether the subsidy leads to similarly successful and innovative businesses compared to non-subsidized businesses. An assessment of this economic/growth aspect is also important, since the subsidy might induce negative effects that may outweigh the positive effects from an ALMP perspective. The main results of Chapter 4 indicate that subsidized founders seem to have no shortages in terms of formal education, but exhibit less employment and industry-specific experience, and are less likely to benefit from intergenerational transmission of start-ups. Moreover, the study finds evidence that necessity start-ups are over-represented among subsidized business founders, which suggests disadvantages in terms of business preparation due to possible time restrictions right before start-up. Finally, the study also detects more capital constraints among the unemployed, both in terms of the availability of personal equity and access to loans. With respect to potential differences between both groups in terms of business development over time, the results indicate that subsidized start-ups out of unemployment face higher business survival rates 19 months after start-up. However, they lag behind regular business founders in terms of income, business growth, and innovation. The arduous data collection process for start-up activities of non-subsidized founders for Chapter 4 made apparent that Germany is missing a central reporting system for business formations. Additionally, the different start-up reporting systems that do exist exhibit substantial discrepancies in data processing procedures, and therefore also in absolute numbers concerning the overall start-up activity. Chapter 3 is therefore placed in front of Chapter 4 and has the aim to provide a comprehensive review of the most important German start-up reporting systems. The second part of the thesis consists of Chapter 5 which contributes to the literature on determinants of job search behavior of the unemployed individuals by analyzing the effectiveness of internet search with regard to search behavior of unemployed individuals and subsequent job quality. The third and final part of the thesis outlines why the German labor market reacted in a very mild fashion to the Great Recession 2008/09, especially compared to other countries. Chapter 6 describes current economic trends of the labor market in light of general trends in the European Union, and reveals some of the main associated challenges. Thereafter, recent reforms of the main institutional settings of the labor market which influence labor supply are analyzed. Finally, based on the status quo of these institutional settings, the chapter gives a brief overview of strategies to adequately combat the challenges in terms of labor supply and to ensure economic growth in the future.},
  language  = {en}
}
@phdthesis{Peng2015,
  author    = {Peng, Lei},
  title     = {Electrochemistry and biocatalysis of new peroxide-activating enzymes},
  school      = {Universit{\"a}t Potsdam},
  pages     = {123},
  year      = {2015},
  language  = {en}
}
@phdthesis{Jung2015,
  author    = {Jung, J{\"o}rg},
  title     = {Efficient credit based server load balancing},
  school      = {Universit{\"a}t Potsdam},
  pages     = {353},
  year      = {2015},
  language  = {en}
}
@phdthesis{Schiess2015,
  author    = {Schiess, Sonja},
  title     = {Effects of glucotropaeolin and its breakdown product benzyl isothiocyanate on metabolic, endocrine, and inflammatory parameters in humans},
  school      = {Universit{\"a}t Potsdam},
  pages     = {115},
  year      = {2015},
  language  = {en}
}
@phdthesis{Grune2015,
  author    = {Grune, Jana},
  title     = {Effects of a novel non-steroidal mineralocorticoid receptor antagonist on cardiac hypertrophy},
  school      = {Universit{\"a}t Potsdam},
  pages     = {98},
  year      = {2015},
  language  = {en}
}
@phdthesis{Obu2015,
  author    = {Obu, Jaroslav},
  title     = {Effect of mass wasting on soil organic carbon storage and coastal erosion in permafrost environments},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-90599},
  school      = {Universit{\"a}t Potsdam},
  pages     = {iii, 93},
  year      = {2015},
  abstract  = {Accelerated permafrost thaw under the warming Arctic climate can have a significant impact on Arctic landscapes. Areas underlain by permafrost store high amounts of soil organic carbon (SOC). Permafrost disturbances may contribute to increased release of carbon dioxide and methane to the atmosphere. Coastal erosion, amplified through a decrease in Arctic sea-ice extent, may also mobilise SOC from permafrost. Large expanses of permafrost affected land are characterised by intense mass-wasting processes such as solifluction, active-layer detachments and retrogressive thaw slumping. Our aim is to assess the influence of mass wasting on SOC storage and coastal erosion. We studied SOC storage on Herschel Island by analysing active-layer and permafrost samples, and compared non-disturbed sites to those characterised by mass wasting. Mass-wasting sites showed decreased SOC storage and material compaction, whereas sites characterised by material accumulation showed increased storage. The SOC storage on Herschel Island is also significantly correlated to catenary position and other slope characteristics. We estimated SOC storage on Herschel Island to be 34.8 kg C m-2. This is comparable to similar environments in northwest Canada and Alaska. Coastal erosion was analysed using high resolution digital elevation models (DEMs). Two LIDAR scanning of the Yukon Coast were done in 2012 and 2013. Two DEMs with 1 m horizontal resolution were generated and used to analyse elevation changes along the coast. The results indicate considerable spatial variability in short-term coastline erosion and progradation. The high variability was related to the presence of mass-wasting processes. Erosion and deposition extremes were recorded where the retrogressive thaw slump (RTS) activity was most pronounced. Released sediment can be transported by longshore drift and affects not only the coastal processes in situ but also along adjacent coasts. We also calculated volumetric coastal erosion for Herschel Island by comparing a stereo-photogrammetrically derived DEM from 2004 with LIDAR DEMs. We compared this volumetric erosion to planimetric erosion, which was based on coastlines digitised from satellite imagery. We found a complex relationship between planimetric and volumetric coastal erosion, which we attribute to frequent occurrence of mass-wasting processes along the coasts. Our results suggest that volumetric erosion corresponds better with environmental forcing and is more suitable for the estimation of organic carbon fluxes than planimetric erosion. Mass wasting can decrease SOC storage by several mechanisms. Increased aeration following disturbance may increase microbial activity, which accelerates organic matter decomposition. New hydrological conditions that follow the mass wasting event can cause leaching of freshly exposed material. Organic rich material can also be directly removed into the sea or into a lake. On the other hand the accumulation of mobilised material can result in increased SOC storage. Mass-wasting related accumulations of mobilised material can significantly impact coastal erosion in situ or along the adjacent coast by longshore drift. Therefore, the coastline movement observations cannot completely resolve the actual sediment loss due to these temporary accumulations. The predicted increase of mass-wasting activity in the course of Arctic warming may increase SOC mobilisation and coastal erosion induced carbon fluxes.},
  language  = {en}
}
@phdthesis{Timofeeva2015,
  author    = {Timofeeva, Nadezda},
  title     = {Effect of ions and amino-acid sequence on collagen structure},
  school      = {Universit{\"a}t Potsdam},
  pages     = {121},
  year      = {2015},
  language  = {en}
}