@article{AliuArchambaultArcheretal.2016, author = {Aliu, E. and Archambault, S. and Archer, A. and Benbow, W. and Bird, R. and Biteau, Jonathan and Buchovecky, M. and Buckley, J. H. and Bugaev, V. and Byrum, K. and Cardenzana, J. V. and Cerruti, M. and Chen, Xuhui and Ciupik, L. and Connolly, M. P. and Cui, W. and Dickinson, H. J. and Eisch, J. D. and Falcone, A. and Feng, Q. and Finley, J. P. and Fleischhack, H. and Flinders, A. and Fortin, P. and Fortson, L. and Furniss, A. and Gillanders, G. H. and Griffin, S. and Grube, J. and Gyuk, G. and Huetten, M. and Hakansson, Nils and Holder, J. and Humensky, T. B. and Johnson, C. A. and Kaaret, P. and Kar, P. and Kelley-Hoskins, N. and Kertzman, M. and Kieda, D. and Krause, M. and Lang, M. J. and Loo, A. and Maier, G. and McArthur, S. and McCann, A. and Meagher, K. and Moriarty, P. and Mukherjee, R. and Nguyen, T. and Nieto, D. and Ong, R. A. and Otte, A. N. and Pandel, D. and Park, N. and Pelassa, V. and Petrashyk, A. and Pohl, M. and Popkow, A. and Pueschel, Elisa and Quinn, J. and Ragan, K. and Reynolds, P. T. and Richards, G. T. and Roache, E. and Rulten, C. and Santander, M. and Sembroski, G. H. and Shahinyan, K. and Smith, A. W. and Staszak, D. and Telezhinsky, Igor O. and Tucci, J. V. and Tyler, J. and Varlotta, A. and Vincent, S. and Wakely, S. P. and Weiner, O. M. and Weinstein, A. and Wilhelm, Alina and Williams, D. A. and Zitzer, B. and Chernyakova, M. and Roberts, M. S. E.}, title = {A SEARCH FOR VERY HIGH ENERGY GAMMA RAYS FROM THE MISSING LINK BINARY PULSAR J1023+0038 WITH VERITAS}, series = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, volume = {831}, journal = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {0004-637X}, doi = {10.3847/0004-637X/831/2/193}, pages = {7}, year = {2016}, abstract = {The binary millisecond radio pulsar PSR J1023+0038 exhibits many characteristics similar to the gamma-ray binary system PSR B1259-63/LS 2883, making it an ideal candidate for the study of high-energy nonthermal emission. It has been the subject of multiwavelength campaigns following the disappearance of the pulsed radio emission in 2013 June, which revealed the appearance of an accretion disk around the neutron star. We present the results of very high energy (VHE) gamma-ray observations carried out by the Very Energetic Radiation Imaging Telescope Array System before and after this change of state. Searches for steady and pulsed emission of both data sets yield no significant gamma-ray signal above 100 GeV, and upper limits are given for both a steady and pulsed gamma-ray flux. These upper limits are used to constrain the magnetic field strength in the shock region of the PSR J1023+0038 system. Assuming that VHE gamma rays are produced via an inverse Compton mechanism in the shock region, we constrain the shock magnetic field to be greater than similar to 2 G before the disappearance of the radio pulsar and greater than similar to 10 G afterward.}, language = {en} } @article{AbeysekaraArchambaultArcheretal.2016, author = {Abeysekara, A. U. and Archambault, S. and Archer, A. and Benbow, W. and Bird, R. and Buchovecky, M. and Buckley, J. H. and Byrum, K. and Cardenzana, J. V. and Cerruti, M. and Chen, Xuhui and Christiansen, J. L. and Ciupik, L. and Cui, W. and Dickinson, H. J. and Eisch, J. D. and Errando, M. and Falcone, A. and Fegan, D. J. and Feng, Q. and Finley, J. P. and Fleischhack, H. and Fortin, P. and Fortson, L. and Furniss, A. and Gillanders, G. H. and Griffin, S. and Grube, J. and Gyuk, G. and Huetten, M. and Hakansson, Nils and Hanna, D. and Holder, J. and Humensky, T. B. and Johnson, C. A. and Kaaret, P. and Kar, P. and Kelley-Hoskins, N. and Kertzman, M. and Kieda, D. and Krause, M. and Krennrich, F. and Kumar, S. and Lang, M. J. and Lin, T. T. Y. and Maier, G. and McArthur, S. and McCann, A. and Meagher, K. and Moriarty, P. and Mukherjee, R. and Nieto, D. and Ong, R. A. and Otte, A. N. and Park, N. and Perkins, J. S. and Petrashyk, A. and Pohl, Martin and Popkow, A. and Pueschel, Elisa and Quinn, J. and Ragan, K. and Ratliff, G. and Reynolds, P. T. and Richards, G. T. and Roache, E. and Santander, M. and Sembroski, G. H. and Shahinyan, K. and Staszak, D. and Telezhinsky, Igor O. and Tucci, J. V. and Tyler, J. and Vincent, S. and Wakely, S. P. and Weiner, O. M. and Weinstein, A. and Williams, D. A. and Zitzer, B.}, title = {A SEARCH FOR BRIEF OPTICAL FLASHES ASSOCIATED WITH THE SETI TARGET KIC 8462852}, series = {The astrophysical journal : an international review of spectroscopy and astronomical physics ; Part 2, Letters}, volume = {818}, journal = {The astrophysical journal : an international review of spectroscopy and astronomical physics ; Part 2, Letters}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {2041-8205}, doi = {10.3847/2041-8205/818/2/L33}, pages = {6}, year = {2016}, abstract = {The F-type star KIC. 8462852 has recently been identified as an exceptional target for search for extraterrestrial intelligence (SETI) observations. We describe an analysis methodology for optical SETI, which we have used to analyze nine hours of serendipitous archival observations of KIC. 8462852 made with the VERITAS gamma-ray observatory between 2009 and 2015. No evidence of pulsed optical beacons, above a pulse intensity at the Earth of approximately 1 photon m(-2), is found. We also discuss the potential use of imaging atmospheric Cherenkov telescope arrays in searching for extremely short duration optical transients in general.}, language = {en} } @article{JanczykWelshDolk2016, author = {Janczyk, Markus and Welsh, Timothy N. and Dolk, Thomas}, title = {A role of goals for social inhibition of return?}, series = {The quarterly journal of experimental psychology}, volume = {69}, journal = {The quarterly journal of experimental psychology}, publisher = {Wiley-VCH}, address = {Abingdon}, issn = {1747-0218}, doi = {10.1080/17470218.2015.1112417}, pages = {2402 -- 2418}, year = {2016}, abstract = {The social inhibition of return (sIOR) effect refers to the finding that response initiation times are longer if a movement is executed to a location where another person has responded to just before. Previous studies have examined the influence of the goal of the action on sIOR. In these studies, however, the movement endpoint and to-be-attained goal (e.g., touching/pressing a response key) were at the same spatial location. In the present two experiments, we disentangled movement endpoint and goal's identity and locations by means of introducing action effects that followed directly from a movement. Similar methods were previously shown powerful enough to clearly show the importance of action goals for other phenomena—a finding consistent with effect-based theories of action control, such as the ideomotor theory. The results of the present study revealed that sIOR was shaped by the movement endpoint location, not the goal's identity or location. That is, in both experiments, an sIOR effect was observed, but the magnitude of the sIOR effect was not modulated by repetitions/switches of goals or their locations. Thus, results indicate that goals play a negligible role in the emergence of the sIOR and, consequently, highlight the importance of action observation for the emergence of the sIOR effect.}, language = {en} } @article{BaerStrohmaier2016, author = {B{\"a}r, Christian and Strohmaier, Alexander}, title = {A Rigorous Geometric Derivation of the Chiral Anomaly in Curved Backgrounds}, series = {Communications in mathematical physics}, volume = {347}, journal = {Communications in mathematical physics}, publisher = {Springer}, address = {New York}, issn = {0010-3616}, doi = {10.1007/s00220-016-2664-1}, pages = {703 -- 721}, year = {2016}, abstract = {We discuss the chiral anomaly for a Weyl field in a curved background and show that a novel index theorem for the Lorentzian Dirac operator can be applied to describe the gravitational chiral anomaly. A formula for the total charge generated by the gravitational and gauge field background is derived directly in Lorentzian signature and in a mathematically rigorous manner. It contains a term identical to the integrand in the Atiyah-Singer index theorem and another term involving the.-invariant of the Cauchy hypersurfaces.}, language = {en} } @article{LyTarkhanov2016, author = {Ly, Ibrahim and Tarkhanov, Nikolai Nikolaevich}, title = {A Rado theorem for p-harmonic functions}, series = {Boletin de la Sociedad Matem{\~A}!'tica Mexicana}, volume = {22}, journal = {Boletin de la Sociedad Matem{\~A}!'tica Mexicana}, publisher = {Springer}, address = {Basel}, issn = {1405-213X}, doi = {10.1007/s40590-016-0109-7}, pages = {461 -- 472}, year = {2016}, abstract = {Let A be a nonlinear differential operator on an open set X subset of R-n and S a closed subset of X. Given a class F of functions in X, the set S is said to be removable for F relative to A if any weak solution of A(u) = 0 in XS of class F satisfies this equation weakly in all of X. For the most extensively studied classes F, we show conditions on S which guarantee that S is removable for F relative to A.}, language = {en} } @phdthesis{Marx2016, author = {Marx, Robert}, title = {A quantitative model of spatial correlations in parametric down conversion for investigating complementarity at a double slit}, school = {Universit{\"a}t Potsdam}, pages = {135}, year = {2016}, language = {en} } @article{RamischLockotHaberzettletal.2016, author = {Ramisch, Arne and Lockot, Gregori and Haberzettl, Torsten and Hartmann, Kai and Kuhn, Gerhard and Lehmkuhl, Frank and Schimpf, Stefan and Schulte, Philipp and Stauch, Georg and Wang, Rong and Wunnemann, Bernd and Yan, Dada and Zhang, Yongzhan and Diekmann, Bernhard}, title = {A persistent northern boundary of Indian Summer Monsoon precipitation over Central Asia during the Holocene}, series = {Scientific reports}, volume = {6}, journal = {Scientific reports}, publisher = {Nature Publ. Group}, address = {London}, issn = {2045-2322}, doi = {10.1038/srep25791}, pages = {596 -- 633}, year = {2016}, abstract = {Extra-tropical circulation systems impede poleward moisture advection by the Indian Summer Monsoon. In this context, the Himalayan range is believed to insulate the south Asian circulation from extra-tropical influences and to delineate the northern extent of the Indian Summer Monsoon in central Asia. Paleoclimatic evidence, however, suggests increased moisture availability in the Early Holocene north of the Himalayan range which is attributed to an intensification of the Indian Summer Monsoon. Nevertheless, mechanisms leading to a surpassing of the Himalayan range and the northern maximum extent of summer monsoonal influence remain unknown. Here we show that the Kunlun barrier on the northern Tibetan Plateau [similar to 36 degrees N] delimits Indian Summer Monsoon precipitation during the Holocene. The presence of the barrier relocates the insulation effect 1,000 km further north, allowing a continental low intensity branch of the Indian Summer Monsoon which is persistent throughout the Holocene. Precipitation intensities at its northern extent seem to be driven by differentiated solar heating of the Northern Hemisphere indicating dependency on energy-gradients rather than absolute radiation intensities. The identified spatial constraints of monsoonal precipitation will facilitate the prediction of future monsoonal precipitation patterns in Central Asia under varying climatic conditions.}, language = {en} } @article{KuehnScherbaum2016, author = {Kuehn, Nicolas M. and Scherbaum, Frank}, title = {A partially non-ergodic ground-motion prediction equation for Europe and the Middle East}, series = {Bulletin of earthquake engineering : official publication of the European Association for Earthquake Engineering}, volume = {14}, journal = {Bulletin of earthquake engineering : official publication of the European Association for Earthquake Engineering}, publisher = {Springer}, address = {Dordrecht}, issn = {1570-761X}, doi = {10.1007/s10518-016-9911-x}, pages = {2629 -- 2642}, year = {2016}, abstract = {A partially non-ergodic ground-motion prediction equation is estimated for Europe and the Middle East. Therefore, a hierarchical model is presented that accounts for regional differences. For this purpose, the scaling of ground-motion intensity measures is assumed to be similar, but not identical in different regions. This is achieved by assuming a hierarchical model, where some coefficients are treated as random variables which are sampled from an underlying global distribution. The coefficients are estimated by Bayesian inference. This allows one to estimate the epistemic uncertainty in the coefficients, and consequently in model predictions, in a rigorous way. The model is estimated based on peak ground acceleration data from nine different European/Middle Eastern regions. There are large differences in the amount of earthquakes and records in the different regions. However, due to the hierarchical nature of the model, regions with only few data points borrow strength from other regions with more data. This makes it possible to estimate a separate set of coefficients for all regions. Different regionalized models are compared, for which different coefficients are assumed to be regionally dependent. Results show that regionalizing the coefficients for magnitude and distance scaling leads to better performance of the models. The models for all regions are physically sound, even if only very few earthquakes comprise one region.}, language = {en} } @phdthesis{Rackwitz2016, author = {Rackwitz, Jenny}, title = {A novel approach to study low-energy electron-induced damage to DNA oligonucleotides}, school = {Universit{\"a}t Potsdam}, pages = {137}, year = {2016}, language = {en} } @phdthesis{Pellizzer2016, author = {Pellizzer, Tommaso}, title = {A novel approach to identify plastidic factors for plastome genome incompatibility and evidence for the central involvement of the chloroplast in leaf shaping}, school = {Universit{\"a}t Potsdam}, pages = {136}, year = {2016}, language = {en} } @article{LandwehrKuehnSchefferetal.2016, author = {Landwehr, Niels and Kuehn, Nicolas M. and Scheffer, Tobias and Abrahamson, Norman A.}, title = {A Nonergodic Ground-Motion Model for California with Spatially Varying Coefficients}, series = {Bulletin of the Seismological Society of America}, volume = {106}, journal = {Bulletin of the Seismological Society of America}, publisher = {Seismological Society of America}, address = {Albany}, issn = {0037-1106}, doi = {10.1785/0120160118}, pages = {2574 -- 2583}, year = {2016}, abstract = {Traditional probabilistic seismic-hazard analysis as well as the estimation of ground-motion models (GMMs) is based on the ergodic assumption, which means that the distribution of ground motions over time at a given site is the same as their spatial distribution over all sites for the same magnitude, distance, and site condition. With a large increase in the number of recorded ground-motion data, there are now repeated observations at given sites and from multiple earthquakes in small regions, so that assumption can be relaxed. We use a novel approach to develop a nonergodic GMM, which is cast as a varying-coefficient model (VCM). In this model, the coefficients are allowed to vary by geographical location, which makes it possible to incorporate effects of spatially varying source, path, and site conditions. Hence, a separate set of coefficients is estimated for each source and site coordinate in the data set. The coefficients are constrained to be similar for spatially nearby locations. This is achieved by placing a Gaussian process prior on the coefficients. The amount of correlation is determined by the data. The spatial correlation structure of the model allows one to extrapolate the varying coefficients to a new location and trace the corresponding uncertainties. The approach is illustrated with the Next Generation Attenuation-West2 data set, using only Californian records. The VCM outperforms a traditionally estimated GMM in terms of generalization error and leads to a reduction in the aleatory standard deviation by similar to 40\%, which has important implications for seismic-hazard calculations. The scaling of the model with respect to its predictor variables such as magnitude and distance is physically plausible. The epistemic uncertainty associated with the predicted ground motions is small in places where events or stations are close and large where data are sparse.}, language = {en} } @article{YepesAudinAlvaradoetal.2016, author = {Yepes, Hugo and Audin, Laurence and Alvarado, Alexandra and Beauval, Celine and Aguilar, Jorge and Font, Yvonne and Cotton, Fabrice}, title = {A new view for the geodynamics of Ecuador: Implication in seismogenic source definition and seismic hazard assessment}, series = {Tectonics}, volume = {35}, journal = {Tectonics}, publisher = {American Geophysical Union}, address = {Washington}, issn = {0278-7407}, doi = {10.1002/2015TC003941}, pages = {1249 -- 1279}, year = {2016}, abstract = {A new view of Ecuador's complex geodynamics has been developed in the course of modeling seismic source zones for probabilistic seismic hazard analysis. This study focuses on two aspects of the plates' interaction at a continental scale: (a) age-related differences in rheology between Farallon and Nazca plates—marked by the Grijalva rifted margin and its inland projection—as they subduct underneath central Ecuador, and (b) the rapidly changing convergence obliquity resulting from the convex shape of the South American northwestern continental margin. Both conditions satisfactorily explain several characteristics of the observed seismicity and of the interseismic coupling. Intermediate-depth seismicity reveals a severe flexure in the Farallon slab as it dips and contorts at depth, originating the El Puyo seismic cluster. The two slabs position and geometry below continental Ecuador also correlate with surface expressions observable in the local and regional geology and tectonics. The interseismic coupling is weak and shallow south of the Grijalva rifted margin and increases northward, with a heterogeneous pattern locally associated to the Carnegie ridge subduction. High convergence obliquity is responsible for the North Andean Block northeastward movement along localized fault systems. The Cosanga and Pallatanga fault segments of the North Andean Block-South American boundary concentrate most of the seismic moment release in continental Ecuador. Other inner block faults located along the western border of the inter-Andean Depression also show a high rate of moderate-size earthquake production. Finally, a total of 19 seismic source zones were modeled in accordance with the proposed geodynamic and neotectonic scheme.}, language = {en} } @article{NeherKniepertElimelechetal.2016, author = {Neher, Dieter and Kniepert, Juliane and Elimelech, Arik and Koster, L. Jan Anton}, title = {A New Figure of Merit for Organic Solar Cells with Transport-limited Photocurrents}, series = {Scientific reports}, volume = {6}, journal = {Scientific reports}, publisher = {Nature Publ. Group}, address = {London}, issn = {2045-2322}, doi = {10.1038/srep24861}, pages = {E2348 -- E2349}, year = {2016}, abstract = {Compared to their inorganic counterparts, organic semiconductors suffer from relatively low charge carrier mobilities. Therefore, expressions derived for inorganic solar cells to correlate characteristic performance parameters to material properties are prone to fail when applied to organic devices. This is especially true for the classical Shockley-equation commonly used to describe current-voltage (JV)-curves, as it assumes a high electrical conductivity of the charge transporting material. Here, an analytical expression for the JV-curves of organic solar cells is derived based on a previously published analytical model. This expression, bearing a similar functional dependence as the Shockley-equation, delivers a new figure of merit a to express the balance between free charge recombination and extraction in low mobility photoactive materials. This figure of merit is shown to determine critical device parameters such as the apparent series resistance and the fill factor.}, language = {en} } @article{NeherKniepertElimelechetal.2016, author = {Neher, Dieter and Kniepert, Juliane and Elimelech, Arik and Koster, L. Jan Anton}, title = {A New Figure of Merit for Organic Solar Cells with Transport-limited Photocurrents}, series = {Scientific reports}, volume = {6}, journal = {Scientific reports}, publisher = {Nature Publishing Group}, address = {London}, issn = {2045-2322}, doi = {10.1038/srep24861}, pages = {9}, year = {2016}, abstract = {Compared to their inorganic counterparts, organic semiconductors suffer from relatively low charge carrier mobilities. Therefore, expressions derived for inorganic solar cells to correlate characteristic performance parameters to material properties are prone to fail when applied to organic devices. This is especially true for the classical Shockley-equation commonly used to describe current-voltage (JV)-curves, as it assumes a high electrical conductivity of the charge transporting material. Here, an analytical expression for the JV-curves of organic solar cells is derived based on a previously published analytical model. This expression, bearing a similar functional dependence as the Shockley-equation, delivers a new figure of merit α to express the balance between free charge recombination and extraction in low mobility photoactive materials. This figure of merit is shown to determine critical device parameters such as the apparent series resistance and the fill factor.}, language = {en} } @article{LogacevVasishth2016, author = {Logacev, Pavel and Vasishth, Shravan}, title = {A Multiple-Channel Model of Task-Dependent Ambiguity Resolution in Sentence Comprehension}, series = {Cognitive science : a multidisciplinary journal of anthropology, artificial intelligence, education, linguistics, neuroscience, philosophy, psychology ; journal of the Cognitive Science Society}, volume = {40}, journal = {Cognitive science : a multidisciplinary journal of anthropology, artificial intelligence, education, linguistics, neuroscience, philosophy, psychology ; journal of the Cognitive Science Society}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0364-0213}, doi = {10.1111/cogs.12228}, pages = {266 -- 298}, year = {2016}, abstract = {Traxler, Pickering, and Clifton (1998) found that ambiguous sentences are read faster than their unambiguous counterparts. This so-called ambiguity advantage has presented a major challenge to classical theories of human sentence comprehension (parsing) because its most prominent explanation, in the form of the unrestricted race model (URM), assumes that parsing is non-deterministic. Recently, Swets, Desmet, Clifton, and Ferreira (2008) have challenged the URM. They argue that readers strategically underspecify the representation of ambiguous sentences to save time, unless disambiguation is required by task demands. When disambiguation is required, however, readers assign sentences full structure—and Swets et al. provide experimental evidence to this end. On the basis of their findings, they argue against the URM and in favor of a model of task-dependent sentence comprehension. We show through simulations that the Swets et al. data do not constitute evidence for task-dependent parsing because they can be explained by the URM. However, we provide decisive evidence from a German self-paced reading study consistent with Swets et al.'s general claim about task-dependent parsing. Specifically, we show that under certain conditions, ambiguous sentences can be read more slowly than their unambiguous counterparts, suggesting that the parser may create several parses, when required. Finally, we present the first quantitative model of task-driven disambiguation that subsumes the URM, and we show that it can explain both Swets et al.'s results and our findings.}, language = {en} } @article{ZieglerHeidbachReineckeretal.2016, author = {Ziegler, Moritz O. and Heidbach, Oliver and Reinecker, John and Przybycin, Anna M. and Scheck-Wenderoth, Magdalena}, title = {A multi-stage 3-D stress field modelling approach exemplified in the Bavarian Molasse Basin}, series = {Solid earth}, volume = {7}, journal = {Solid earth}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1869-9510}, doi = {10.5194/se-7-1365-2016}, pages = {1365 -- 1382}, year = {2016}, language = {en} } @article{GoebelStoltenbergKrehletal.2016, author = {G{\"o}bel, Ronald and Stoltenberg, Marcus and Krehl, Stefan and Biolley, Christine and Rothe, Regina and Schmidt, Bernd and Hesemann, Peter and Taubert, Andreas}, title = {A Modular Approach towards Mesoporous Silica Monoliths with Organically Modified Pore Walls: Nucleophilic Addition, Olefin Metathesis, and Cycloaddition}, series = {European journal of inorganic chemistry : a journal of ChemPubSoc Europe}, volume = {6}, journal = {European journal of inorganic chemistry : a journal of ChemPubSoc Europe}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1434-1948}, doi = {10.1002/ejic.201500638}, pages = {2088 -- 2099}, year = {2016}, abstract = {We have synthesized mesoporous silica (monoliths) with defined surface chemistry by means of a number of addition reactions: (i) coupling of an isocyanate to a surface-immobilized thiol, (ii) addition of an epoxide to a surface-immobilized thiol, (iii) cross-metathesis between two olefins, and (iv) Huisgen [2+3] cycloaddition of an alkyne-functionalized silica monolith with an azide. Functionalization of the mesopores was observed, but there are significant differences between individual approaches. Isocyanate and epoxide additions lead to high degrees of functionalization, whereas olefin metathesis and [2+3] cycloaddition are less effective. We further show that the efficiency of the modification is about twice as high in mesoporous silica particles than in macroscopic silica monoliths.}, language = {en} } @article{KrupinskiBozorgLarssonetal.2016, author = {Krupinski, Pawel and Bozorg, Behruz and Larsson, Andre and Pietra, Stefano and Grebe, Markus and J{\"o}nsson, Henrik}, title = {A Model Analysis of Mechanisms for Radial Microtubular Patterns at Root Hair Initiation Sites}, series = {Frontiers in plant science}, volume = {7}, journal = {Frontiers in plant science}, publisher = {Frontiers Research Foundation}, address = {Lausanne}, issn = {1664-462X}, doi = {10.3389/fpls.2016.01560}, pages = {12}, year = {2016}, abstract = {Plant cells have two main modes of growth generating anisotropic structures. Diffuse growth where whole cell walls extend in specific directions, guided by anisotropically positioned cellulose fibers, and tip growth, with inhomogeneous addition of new cell wall material at the tip of the structure. Cells are known to regulate these processes via molecular signals and the cytoskeleton. Mechanical stress has been proposed to provide an input to the positioning of the cellulose fibers via cortical microtubules in diffuse growth. In particular, a stress feedback model predicts a circumferential pattern of fibers surrounding apical tissues and growing primordia, guided by the anisotropic curvature in such tissues. In contrast, during the initiation of tip growing root hairs, a star-like radial pattern has recently been observed. Here, we use detailed finite element models to analyze how a change in mechanical properties at the root hair initiation site can lead to star-like stress patterns in order to understand whether a stress-based feedback model can also explain the microtubule patterns seen during root hair initiation. We show that two independent mechanisms, individually or combined, can be sufficient to generate radial patterns. In the first, new material is added locally at the position of the root hair. In the second, increased tension in the initiation area provides a mechanism. Finally, we describe how a molecular model of Rho-of-plant (ROP) GTPases activation driven by auxin can position a patch of activated ROP protein basally along a 2D root epidermal cell plasma membrane, paving the way for models where mechanical and molecular mechanisms cooperate in the initial placement and outgrowth of root hairs.}, language = {en} } @article{MegowKuleszaMay2016, author = {Megow, J{\"o}rg and Kulesza, Alexander and May, Volkhard}, title = {A mixed quantum-classical description of pheophorbide a linear absorption spectra: Quantum-corrections of the Q(y)- and Q(x)-absorption vibrational satellites}, series = {Chemical physics letters}, volume = {643}, journal = {Chemical physics letters}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0009-2614}, doi = {10.1016/j.cplett.2015.11.016}, pages = {61 -- 65}, year = {2016}, abstract = {The ground-state classical path approximation is utilized to compute molecular absorption spectra in a mixed quantum-classical frame. To improve the description for high-frequency vibrational satellites, related quantum correction factors are introduced. The improved method is demonstrated for the Q(y),and Q(x)-bands of pheophorbide a. (C) 2015 Elsevier B.V. All rights reserved.}, language = {en} } @article{ClusellaPolitiRosenblum2016, author = {Clusella, Pau and Politi, Antonio and Rosenblum, Michael}, title = {A minimal model of self-consistent partial synchrony}, series = {NEW JOURNAL OF PHYSICS}, volume = {18}, journal = {NEW JOURNAL OF PHYSICS}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1367-2630}, doi = {10.1088/1367-2630/18/9/093037}, pages = {15}, year = {2016}, abstract = {We show that self-consistent partial synchrony in globally coupled oscillatory ensembles is a general phenomenon. We analyze in detail appearance and stability properties of this state in possibly the simplest setup of a biharmonic Kuramoto-Daido phase model as well as demonstrate the effect in limit-cycle relaxational Rayleigh oscillators. Such a regime extends the notion of splay state from a uniform distribution of phases to an oscillating one. Suitable collective observables such as the Kuramoto order parameter allow detecting the presence of an inhomogeneous distribution. The characteristic and most peculiar property of self-consistent partial synchrony is the difference between the frequency of single units and that of the macroscopic field.}, language = {en} }