@article{WrightAmesMitchelll2016, author = {Wright, Justin P. and Ames, Gregory M. and Mitchelll, Rachel M.}, title = {The more things change, the more they stay the same? When is trait variability important for stability of ecosystem function in a changing environment}, series = {Philosophical transactions of the Royal Society of London : B, Biological sciences}, volume = {371}, journal = {Philosophical transactions of the Royal Society of London : B, Biological sciences}, publisher = {Royal Society}, address = {London}, issn = {0962-8436}, doi = {10.1098/rstb.2015.0272}, pages = {7}, year = {2016}, abstract = {The importance of intraspecific trait variability for community dynamics and ecosystem functioning has been underappreciated. There are theoretical reasons for predicting that species that differ in intraspecific trait variability will also differ in their effects on ecosystem functioning, particularly in variable environments. We discuss whether species with greater trait variability are likely to exhibit greater temporal stability in their population dynamics, and under which conditions this might lead to stability in ecosystem functioning. Resolving this requires us to consider several questions. First, are species with high levels of variation for one trait equally variable in others? In particular, is variability in response and effects traits typically correlated? Second, what is the relative contribution of local adaptation and phenotypic plasticity to trait variability? If local adaptation dominates, then stability in function requires one of two conditions: (i) individuals of appropriate phenotypes present in the environment at high enough frequencies to allow for populations to respond rapidly to the changing environment, and (ii) high levels of dispersal and gene flow. While we currently lack sufficient information on the causes and distribution of variability in functional traits, filling in these key data gaps should increase our ability to predict how changing biodiversity will alter ecosystem functioning.}, language = {en} } @article{WeithoffRochaGaedke2015, author = {Weithoff, Guntram and Rocha, Marcia R. and Gaedke, Ursula}, title = {Comparing seasonal dynamics of functional and taxonomic diversity reveals the driving forces underlying phytoplankton community structure}, series = {Freshwater biology}, volume = {60}, journal = {Freshwater biology}, number = {4}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0046-5070}, doi = {10.1111/fwb.12527}, pages = {758 -- 767}, year = {2015}, abstract = {In most biodiversity studies, taxonomic diversity is the measure for the multiplicity of species and is often considered to represent functional diversity. However, trends in taxonomic diversity and functional diversity may differ, for example, when many functionally similar but taxonomically different species co-occur in a community. The differences between these diversity measures are of particular interest in diversity research for understanding diversity patterns and their underlying mechanisms. We analysed a temporally highly resolved 20-year time series of lake phytoplankton to determine whether taxonomic diversity and functional diversity exhibit similar or contrasting seasonal patterns. We also calculated the functional mean of the community in n-dimensional trait space for each sampling day to gain further insights into the seasonal dynamics of the functional properties of the community. We found an overall weak positive relationship between taxonomic diversity and functional diversity with a distinct seasonal pattern. The two diversity measures showed synchronous behaviour from early spring to mid-summer and a more complex and diverging relationship from autumn to late winter. The functional mean of the community exhibited a recurrent annual pattern with the most prominent changes before and after the clear-water phase. From late autumn to winter, the functional mean of the community and functional diversity were relatively constant while taxonomic diversity declined, suggesting competitive exclusion during this period. A further decline in taxonomic diversity concomitant with increasing functional diversity in late winter to early spring is seen as a result of niche diversification together with competitive exclusion. Under these conditions, several different sets of traits are suitable to thrive, but within one set of functional traits only one, or very few, morphotypes can persist. Taxonomic diversity alone is a weak descriptor of trait diversity in phytoplankton. However, the combined analysis of taxonomic diversity and functional diversity, along with the functional mean of the community, allows for deeper insights into temporal patterns of community assembly and niche diversification.}, language = {en} } @phdthesis{Wasiolka2007, author = {Wasiolka, Bernd}, title = {The impact of overgrazing on reptile diversity and population dynamics of Pedioplanis l. lineoocellata in the southern Kalahari}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-16611}, school = {Universit{\"a}t Potsdam}, year = {2007}, abstract = {Die Vegetationskomposition und -struktur, beispielsweise die unterschiedliche Architektur von B{\"a}umen, Str{\"a}uchern, Gr{\"a}sern und Kr{\"a}utern, bietet ein großes Spektrum an Habitaten und Nischen, die wiederum eine hohe Tierdiversit{\"a}t in den Savannensystemen des s{\"u}dlichen Afrikas erm{\"o}glichen. Dieses {\"O}kosystem wurde jedoch {\"u}ber Jahrzehnte weltweit durch intensive anthropogene Landnutzung (z.B. Viehwirtschaft) nachhaltig ver{\"a}ndert. Dabei wurden die Zusammensetzung, Diversit{\"a}t und Struktur der Vegetation stark ver{\"a}ndert. {\"U}berweidung in Savannensystemen f{\"u}hrt zu einer Degradation des Habitates einhergehend mit dem Verlust von perennierenden Gr{\"a}sern und krautiger Vegetation. Dies f{\"u}hrt zu einem Anstieg an vegetationsfreien Bodenfl{\"a}chen. Beides, sowohl der Verlust an perennierenden Gr{\"a}sern und krautiger Vegetation sowie der Anstieg an vegetationsfreien Fl{\"a}chen f{\"u}hrt zu verbesserten Etablierungsbedingungen f{\"u}r Str{\"a}ucher (z.B. Rhigozum trichotomum, Acacia mellifera) und auf lange Sicht zu stark verbuschten Fl{\"a}chen. Die Tierdiversit{\"a}t in Savannen ist hiervon entscheidend beeinflusst. Mit sinkender struktureller Diversit{\"a}t verringert sich auch die Tierdiversit{\"a}t. W{\"a}hrend der Einfluss von {\"U}berweidung auf die Vegetation relativ gut untersucht ist sind Informationen {\"u}ber den Einfluss von {\"U}berweidung auf die Tierdiversit{\"a}t, speziell f{\"u}r Reptilien, eher sp{\"a}rlich vorhanden. Zus{\"a}tzlich ist sehr wenig bekannt zum Einfluss auf die Populationsdynamik (z.B. Verhaltensanpassungen, Raumnutzung, {\"U}berlebensrate, Sterberate) einzelner Reptilienarten. Ziel meiner Doktorarbeit ist es den Einfluss von {\"U}berweidung durch kommerzielle Farmnutzung auf die Reptiliengemeinschaft und auf verschiedene Aspekte der Populationsdynamik der Echse Pedioplanis lineoocellata lineoocellata zu untersuchen. Hinsichtlich bestimmter Naturschutzmaßnahmen ist es einerseits wichtig zu verstehen welchen Auswirkungen {\"U}berweidung auf die gesamte Reptiliengemeinschaft hat. Und zum anderen wie entscheidende Faktoren der Populationsdynamik beeinflusst werden. Beides f{\"u}hrt zu einem besseren Verst{\"a}ndnis der Reaktion von Reptilien auf Habitatdegradation zu erlangen. Die Ergebnisse meiner Doktorarbeit zeigen eindeutig einen negativen Einfluss der {\"U}berweidung und der daraus resultierende Habitatdegradation auf (1) die gesamte Reptiliengemeinschaft und (2) auf einzelne Aspekte der Populationsdynamik von P. lineoocellata. Im Teil 1 wird die signifikante Reduzierung der Reptiliendiversit{\"a}t und Abundanz in degradierten Habitaten beschrieben. Im zweiten Teil wird gezeigt, dass P. lineoocellata das Verhalten an die verschlechterten Lebensbedingungen anpassen kann. Die Art bewegt sich sowohl h{\"a}ufiger als auch {\"u}ber einen l{\"a}ngeren Zeitraum und legt dabei gr{\"o}ßere Distanzen zur{\"u}ck. Zus{\"a}tzlich vergr{\"o}ßerte die Art ihr Revier (home range) (Teil 3). Im abschließenden Teil wird der negative Einfluss von {\"U}berweidung auf die Populationsdynamik von P. lineoocellata beschrieben: In degradierten Habitaten nimmt die Populationsgr{\"o}ße von adulten und juvenilen Echsen ab, die {\"U}berlebens- und Geburtenrate sinken, w{\"a}hren zus{\"a}tzlich das Pr{\"a}dationsrisiko ansteigt. Verantwortlich hierf{\"u}r ist zum einen die ebenfalls reduzierte Nahrungsverf{\"u}gbarkeit (Arthropoden) auf degradierten Fl{\"a}chen. Dies hat zur Folge, dass die Populationsgr{\"o}ße abnimmt und die Fitness der Individuen verringert wird, welches sich durch eine Reduzierung der {\"U}berlebens- und Geburtenrate bemerkbar macht. Und zum anderen ist es die Reduzierung der Vegetationsbedeckung und der R{\"u}ckgang an perennierenden Gr{\"a}sern welche sich negativ auswirken. Als Konsequenz hiervon gehen Nischen und Mikrohabitate verloren und die M{\"o}glichkeiten der Reptilien zur Thermoregulation sind verringert. Des Weiteren hat dieser Verlust an perennierender Grasbedeckung auch ein erh{\"o}htes Pr{\"a}dationsrisikos zur Folge. Zusammenfassend l{\"a}sst sich sagen, dass nicht nur B{\"a}ume und Str{\"a}ucher, wie in anderen Studien gezeigt, eine bedeutende Rolle f{\"u}r die Diversit{\"a}t spielen, sondern auch das perennierende Gras eine wichtige Rolle f{\"u}r die Faunendiversit{\"a}t spielt. Weiterhin zeigte sich, dass Habitatdegradation nicht nur die Population als gesamtes beeinflusst, sondern auch das Verhalten und Populationsparameter einzelner Arten. Des Weiteren ist es Reptilien m{\"o}glich durch Verhaltensflexibilit{\"a}t auf verschlechterte Umweltbedingen zu reagieren.}, language = {en} } @article{WackerMarzetzSpijkerman2015, author = {Wacker, Alexander and Marzetz, Vanessa and Spijkerman, Elly}, title = {Interspecific competition in phytoplankton drives the availability of essential mineral and biochemical nutrients}, series = {Ecology : a publication of the Ecological Society of America}, volume = {96}, journal = {Ecology : a publication of the Ecological Society of America}, number = {9}, publisher = {Wiley}, address = {Washington}, issn = {0012-9658}, doi = {10.1890/14-1915.1}, pages = {2467 -- 2477}, year = {2015}, abstract = {The underlying mechanisms and consequences of competition and diversity are central themes in ecology. A higher diversity of primary producers often results in higher resource use efficiency in aquatic and terrestrial ecosystems. This may result in more food for consumers on one hand, while, on the other hand, it can also result in a decreased food quality for consumers; higher biomass combined with the same availability of the limiting compound directly reduces the dietary proportion of the limiting compound. Here we tested whether and how interspecific competition in phytoplankton communities leads to changes in resource use efficiency and cellular concentrations of nutrients and fatty acids. The measured particulate carbon : phosphorus ratios (C:P) and fatty acid concentrations in the communities were compared to the theoretically expected ratios and concentrations of measurements on simultaneously running monocultures. With interspecific competition, phytoplankton communities had higher concentrations of the monounsaturated fatty acid oleic acid and also much higher concentrations of the ecologically and physiologically relevant long-chain polyunsaturated fatty acid eicosapentaenoic acid than expected concentrations based on monocultures. Such higher availability of essential fatty acids may contribute to the positive relationship between phytoplankton diversity and zooplankton growth, and may compensate limitations by mineral nutrients in higher trophic levels.}, language = {en} } @article{VenailGrossOakleyetal.2015, author = {Venail, Patrick and Gross, Kevin and Oakley, Todd H. and Narwani, Anita and Allan, Eric and Flombaum, Pedro and Isbell, Forest and Joshi, Jasmin Radha and Reich, Peter B. and Tilman, David and van Ruijven, Jasper and Cardinale, Bradley J.}, title = {Species richness, but not phylogenetic diversity, influences community biomass production and temporal stability in a re-examination of 16 grassland biodiversity studies}, series = {Functional ecology : an official journal of the British Ecological Society}, volume = {29}, journal = {Functional ecology : an official journal of the British Ecological Society}, number = {5}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0269-8463}, doi = {10.1111/1365-2435.12432}, pages = {615 -- 626}, year = {2015}, abstract = {Hundreds of experiments have now manipulated species richness (SR) of various groups of organisms and examined how this aspect of biological diversity influences ecosystem functioning. Ecologists have recently expanded this field to look at whether phylogenetic diversity (PD) among species, often quantified as the sum of branch lengths on a molecular phylogeny leading to all species in a community, also predicts ecological function. Some have hypothesized that phylogenetic divergence should be a superior predictor of ecological function than SR because evolutionary relatedness represents the degree of ecological and functional differentiation among species. But studies to date have provided mixed support for this hypothesis. Here, we reanalyse data from 16 experiments that have manipulated plant SR in grassland ecosystems and examined the impact on above-ground biomass production over multiple time points. Using a new molecular phylogeny of the plant species used in these experiments, we quantified how the PD of plants impacts average community biomass production as well as the stability of community biomass production through time. Using four complementary analyses, we show that, after statistically controlling for variation in SR, PD (the sum of branches in a molecular phylogenetic tree connecting all species in a community) is neither related to mean community biomass nor to the temporal stability of biomass. These results run counter to past claims. However, after controlling for SR, PD was positively related to variation in community biomass over time due to an increase in the variances of individual species, but this relationship was not strong enough to influence community stability. In contrast to the non-significant relationships between PD, biomass and stability, our analyses show that SR per se tends to increase the mean biomass production of plant communities, after controlling for PD. The relationship between SR and temporal variation in community biomass was either positive, non-significant or negative depending on which analysis was used. However, the increases in community biomass with SR, independently of PD, always led to increased stability. These results suggest that PD is no better as a predictor of ecosystem functioning than SR.Synthesis. Our study on grasslands offers a cautionary tale when trying to relate PD to ecosystem functioning suggesting that there may be ecologically important trait and functional variation among species that is not explained by phylogenetic relatedness. Our results fail to support the hypothesis that the conservation of evolutionarily distinct species would be more effective than the conservation of SR as a way to maintain productive and stable communities under changing environmental conditions.}, language = {en} } @phdthesis{Teckentrup2019, author = {Teckentrup, Lisa}, title = {Understanding predator-prey interactions}, doi = {10.25932/publishup-43162}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-431624}, school = {Universit{\"a}t Potsdam}, pages = {ix, 133}, year = {2019}, abstract = {Predators can have numerical and behavioral effects on prey animals. While numerical effects are well explored, the impact of behavioral effects is unclear. Furthermore, behavioral effects are generally either analyzed with a focus on single individuals or with a focus on consequences for other trophic levels. Thereby, the impact of fear on the level of prey communities is overlooked, despite potential consequences for conservation and nature management. In order to improve our understanding of predator-prey interactions, an assessment of the consequences of fear in shaping prey community structures is crucial. In this thesis, I evaluated how fear alters prey space use, community structure and composition, focusing on terrestrial mammals. By integrating landscapes of fear in an existing individual-based and spatially-explicit model, I simulated community assembly of prey animals via individual home range formation. The model comprises multiple hierarchical levels from individual home range behavior to patterns of prey community structure and composition. The mechanistic approach of the model allowed for the identification of underlying mechanism driving prey community responses under fear. My results show that fear modified prey space use and community patterns. Under fear, prey animals shifted their home ranges towards safer areas of the landscape. Furthermore, fear decreased the total biomass and the diversity of the prey community and reinforced shifts in community composition towards smaller animals. These effects could be mediated by an increasing availability of refuges in the landscape. Under landscape changes, such as habitat loss and fragmentation, fear intensified negative effects on prey communities. Prey communities in risky environments were subject to a non-proportional diversity loss of up to 30\% if fear was taken into account. Regarding habitat properties, I found that well-connected, large safe patches can reduce the negative consequences of habitat loss and fragmentation on prey communities. Including variation in risk perception between prey animals had consequences on prey space use. Animals with a high risk perception predominantly used safe areas of the landscape, while animals with a low risk perception preferred areas with a high food availability. On the community level, prey diversity was higher in heterogeneous landscapes of fear if individuals varied in their risk perception compared to scenarios in which all individuals had the same risk perception. Overall, my findings give a first, comprehensive assessment of the role of fear in shaping prey communities. The linkage between individual home range behavior and patterns at the community level allows for a mechanistic understanding of the underlying processes. My results underline the importance of the structure of the landscape of fear as a key driver of prey community responses, especially if the habitat is threatened by landscape changes. Furthermore, I show that individual landscapes of fear can improve our understanding of the consequences of trait variation on community structures. Regarding conservation and nature management, my results support calls for modern conservation approaches that go beyond single species and address the protection of biotic interactions.}, language = {en} } @article{StantonBooneSotoShoenderetal.2017, author = {Stanton, Richard A. and Boone, Wesley W. and Soto-Shoender, Jose and Fletcher, Robert J. and Blaum, Niels and McCleery, Robert A.}, title = {Shrub encroachment and vertebrate diversity}, series = {Global ecology and biogeography : a journal of macroecology}, volume = {27}, journal = {Global ecology and biogeography : a journal of macroecology}, number = {3}, publisher = {Wiley}, address = {Hoboken}, issn = {1466-822X}, doi = {10.1111/geb.12675}, pages = {368 -- 379}, year = {2017}, abstract = {Aim: Across the planet, grass-dominated biomes are experiencing shrub encroachment driven by atmospheric CO2 enrichment and land-use change. By altering resource structure and availability, shrub encroachment may have important impacts on vertebrate communities. We sought to determine the magnitude and variability of these effects across climatic gradients, continents, and taxa, and to learn whether shrub thinning restores the structure of vertebrate communities. Location: Worldwide. Time period: Contemporary. Major taxa studied: Terrestrial vertebrates. Methods: We estimated relationships between percentage shrub cover and the structure of terrestrial vertebrate communities (species richness, Shannon diversity and community abundance) in experimentally thinned and unmanipulated shrub-encroached grass-dominated biomes using systematic review and meta-analyses of 43 studies published from 1978 to 2016. We modelled the effects of continent, biome, mean annual precipitation, net primary productivity and the normalized difference vegetation index (NDVI) on the relationship between shrub cover and vertebrate community structure. Results: Species richness, Shannon diversity and total abundance had no consistent relationship with shrub encroachment and experimental thinning did not reverse encroachment effects on vertebrate communities. However, some effects of shrub encroachment on vertebrate communities differed with net primary productivity, amongst vertebrate groups, and across continents. Encroachment had negative effects on vertebrate diversity at low net primary productivity. Mammalian and herpetofaunal diversity decreased with shrub encroachment. Shrub encroachment also had negative effects on species richness and total abundance in Africa but positive effects in North America. Main conclusions: Biodiversity conservation and mitigation efforts responding to shrub encroachment should focus on low-productivity locations, on mammals and herpetofauna, and in Africa. However, targeted research in neglected regions such as central Asia and India will be needed to fill important gaps in our knowledge of shrub encroachment effects on vertebrates. Additionally, our findings provide an impetus for determining the mechanisms associated with changes in vertebrate diversity and abundance in shrub-encroached grass-dominated biomes.}, language = {en} } @article{SoliveresManningPratietal.2016, author = {Soliveres, Santiago and Manning, Peter and Prati, Daniel and Gossner, Martin M. and Alt, Fabian and Arndt, Hartmut and Baumgartner, Vanessa and Binkenstein, Julia and Birkhofer, Klaus and Blaser, Stefan and Bluethgen, Nico and Boch, Steffen and Boehm, Stefan and Boerschig, Carmen and Buscot, Francois and Diekoetter, Tim and Heinze, Johannes and Hoelzel, Norbert and Jung, Kirsten and Klaus, Valentin H. and Klein, Alexandra-Maria and Kleinebecker, Till and Klemmer, Sandra and Krauss, Jochen and Lange, Markus and Morris, E. Kathryn and Mueller, Joerg and Oelmann, Yvonne and Overmann, J{\"o}rg and Pasalic, Esther and Renner, Swen C. and Rillig, Matthias C. and Schaefer, H. Martin and Schloter, Michael and Schmitt, Barbara and Schoening, Ingo and Schrumpf, Marion and Sikorski, Johannes and Socher, Stephanie A. and Solly, Emily F. and Sonnemann, Ilja and Sorkau, Elisabeth and Steckel, Juliane and Steffan-Dewenter, Ingolf and Stempfhuber, Barbara and Tschapka, Marco and Tuerke, Manfred and Venter, Paul and Weiner, Christiane N. and Weisser, Wolfgang W. and Werner, Michael and Westphal, Catrin and Wilcke, Wolfgang and Wolters, Volkmar and Wubet, Tesfaye and Wurst, Susanne and Fischer, Markus and Allan, Eric}, title = {Locally rare species influence grassland ecosystem multifunctionality}, series = {Philosophical transactions of the Royal Society of London : B, Biological sciences}, volume = {371}, journal = {Philosophical transactions of the Royal Society of London : B, Biological sciences}, publisher = {Royal Society}, address = {London}, issn = {0962-8436}, doi = {10.1098/rstb.2015.0269}, pages = {3175 -- 3185}, year = {2016}, abstract = {Species diversity promotes the delivery of multiple ecosystem functions (multifunctionality). However, the relative functional importance of rare and common species in driving the biodiversity multifunctionality relationship remains unknown. We studied the relationship between the diversity of rare and common species (according to their local abundances and across nine different trophic groups), and multifunctionality indices derived from 14 ecosystem functions on 150 grasslands across a land use intensity (LUI) gradient. The diversity of above- and below-ground rare species had opposite effects, with rare above-ground species being associated with high levels of multifunctionality, probably because their effects on different functions did not trade off against each other. Conversely, common species were only related to average, not high, levels of multifunctionality, and their functional effects declined with LUI. Apart from the community level effects of diversity, we found significant positive associations between the abundance of individual species and multifunctionality in 6\% of the species tested. Species specific functional effects were best predicted by their response to LUI: species that declined in abundance with land use intensification were those associated with higher levels of multifunctionality. Our results highlight the importance of rare species for ecosystem multifunctionality and help guiding future conservation priorities.}, language = {en} } @article{SoliveresMaestreUlrichetal.2015, author = {Soliveres, Santiago and Maestre, Fernando T. and Ulrich, Werner and Manning, Peter and Boch, Steffen and Bowker, Matthew A. and Prati, Daniel and Delgado-Baquerizo, Manuel and Quero, Jose L. and Sch{\"o}ning, Ingo and Gallardo, Antonio and Weisser, Wolfgang W. and M{\"u}ller, J{\"o}rg and Socher, Stephanie A. and Garcia-Gomez, Miguel and Ochoa, Victoria and Schulze, Ernst-Detlef and Fischer, Markus and Allan, Eric}, title = {Intransitive competition is widespread in plant communities and maintains their species richness}, series = {Ecology letters}, volume = {18}, journal = {Ecology letters}, number = {8}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {1461-023X}, doi = {10.1111/ele.12456}, pages = {790 -- 798}, year = {2015}, abstract = {Intransitive competition networks, those in which there is no single best competitor, may ensure species coexistence. However, their frequency and importance in maintaining diversity in real-world ecosystems remain unclear. We used two large data sets from drylands and agricultural grasslands to assess: (1) the generality of intransitive competition, (2) intransitivity-richness relationships and (3) effects of two major drivers of biodiversity loss (aridity and land-use intensification) on intransitivity and species richness. Intransitive competition occurred in >65\% of sites and was associated with higher species richness. Intransitivity increased with aridity, partly buffering its negative effects on diversity, but was decreased by intensive land use, enhancing its negative effects on diversity. These contrasting responses likely arise because intransitivity is promoted by temporal heterogeneity, which is enhanced by aridity but may decline with land-use intensity. We show that intransitivity is widespread in nature and increases diversity, but it can be lost with environmental homogenisation.}, language = {en} } @article{SocherPratiBochetal.2012, author = {Socher, Stephanie A. and Prati, Daniel and Boch, Steffen and M{\"u}ller, J{\"o}rg and Klaus, Valentin H. and H{\"o}lzel, Norbert and Fischer, Markus}, title = {Direct and productivity-mediated indirect effects of fertilization, mowing and grazing on grassland species richness}, series = {The journal of ecology}, volume = {100}, journal = {The journal of ecology}, number = {6}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0022-0477}, doi = {10.1111/j.1365-2745.2012.02020.x}, pages = {1391 -- 1399}, year = {2012}, abstract = {Recent declines in biodiversity have given new urgency to questions about the relationship between land-use change, biodiversity and ecosystem processes. Despite the existence of a large body of research on the effects of land use on species richness, it is unclear whether the effects of land use on species richness are principally direct or indirect, mediated by concomitant changes in ecosystem processes. Therefore, we compared the direct effects of land use (fertilization, mowing and grazing) on species richness with indirect ones (mediated via grassland productivity) for grasslands in central Europe. We measured the richness and above-ground biomass in 150 grassland plots in 3 regions of Germany (the so-called Biodiversity Exploratories). We used univariate and structural equation models to examine direct and indirect land-use effects. The direct effects of mowing (-0.37, effect size) and grazing (0.04) intensity on species richness were stronger compared with the indirect effects of mowing (-0.04) and grazing (-0.01). However, the strong negative effect of fertilization (-0.23) on species richness was mainly indirect, mediated by increased productivity compared with the weak direct negative effect (-0.07). Differences between regions in land-use effects showed five times weaker negative effects of mowing (-0.13) in the region with organic soils (Schorfheide-Chorin), strong overall negative effects of grazing (-0.29) for the region with organic soils opposed to a similar strong positive effect (0.30) in the Hainich-Dun region, whereas the Schwabische Alb region displayed a five times weaker positive effect (0.06) only. Further, fertilization effects on species richness were positive (0.03) for the region with organic soils compared to up to 25 times stronger negative effects in the other two regions. Synthesis. Our results clearly show the importance of studying both direct and indirect effects of land-use intensity. They demonstrate the indirect nature, via productivity, of the negative effect of fertilization intensity on plant species richness in the real-world context of management-induced gradients of intensity of fertilization, mowing and grazing. Finally, they highlight that careful consideration of regional environments is necessary before attempting to generalize land-use effects on species diversity.}, language = {en} } @article{SchwarzerHeinkenLuthardtetal.2013, author = {Schwarzer, Christian and Heinken, Thilo and Luthardt, Vera and Joshi, Jasmin Radha}, title = {Latitudinal shifts in species interactions interfere with resistance of southern but not of northern bog-plant communities to experimental climate change}, series = {The journal of ecology}, volume = {101}, journal = {The journal of ecology}, number = {6}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0022-0477}, doi = {10.1111/1365-2745.12158}, pages = {1484 -- 1497}, year = {2013}, abstract = {The persistence of species under changed climatic conditions depends on adaptations and plastic responses to these conditions and on interactions with their local plant community resulting in direct and indirect effects of changed climatic conditions. Populations at species' range margins may be especially crucial in containing a gene pool comprising adaptations to extreme climatic conditions. Many species of northern European bog ecosystems reach their southern lowland range limit in central Europe. In a common-garden experiment, we experimentally assessed the impact of projected climatic changes on five bog-plant species (including peat moss Sphagnum magellanicum) sampled along a latitudinal gradient of 1400km from Scandinavia to the marginal lowland populations in Germany. Populations were cultivated in monocultures and in experimental communities composed of all five species from their local community, and exposed to five combinations of three climate treatments (warming, fluctuating water-tables, fertilization) in a southern common garden. Whereas most monocultures showed a decreasing biomass production from southern to northern origins under southern environmental conditions, in the experimental mixed-species communities, an increasing biomass production towards northern communities was observed together with a shift in interspecific interactions along the latitudinal gradient. While negative dominance effects prevailed in southern communities, higher net biodiversity effects were observed in northern subarctic communities. The combined effects of climate treatments increased biomass production in monocultures of most origins. In communities, however, overall the treatments did not result in significantly changed biomass production. Among individual treatments, water-table fluctuations caused a significant decrease in biomass production, but only in southern communities, indicating higher vulnerability to changed climatic conditions. Here, negative effects of climate treatments on graminoids were not compensated by the slightly increased growth of peat moss that benefited from interspecific interactions only in northern communities.Synthesis. We conclude that shifting interactions within multispecies communities caused pronounced responses to changed climatic conditions in wetland communities of temperate southern marginal, but not of northern subarctic origin. Therefore, future models investigating the impacts of climate change on plant communities should consider geographical variation in species interactions an important factor influencing community responses to changed climatic conditions.}, language = {en} } @article{RottstockJoshiKummeretal.2014, author = {Rottstock, Tanja and Joshi, Jasmin Radha and Kummer, Volker and Fischer, Markus}, title = {Higher plant diversity promotes higher diversity of fungal pathogens, while it decreases pathogen infection per plant}, series = {Ecology : a publication of the Ecological Society of America}, volume = {95}, journal = {Ecology : a publication of the Ecological Society of America}, number = {7}, publisher = {Wiley}, address = {Washington}, issn = {0012-9658}, pages = {1907 -- 1917}, year = {2014}, abstract = {Fungal plant pathogens are common in natural communities where they affect plant physiology, plant survival, and biomass production. Conversely, pathogen transmission and infection may be regulated by plant community characteristics such as plant species diversity and functional composition that favor pathogen diversity through increases in host diversity while simultaneously reducing pathogen infection via increased variability in host density and spatial heterogeneity. Therefore, a comprehensive understanding of multi-host multi-pathogen interactions is of high significance in the context of biodiversity-ecosystem functioning. We investigated the relationship between plant diversity and aboveground obligate parasitic fungal pathogen ("pathogens" hereafter) diversity and infection in grasslands of a long-term, large-scale, biodiversity experiment with varying plant species (1-60 species) and plant functional group diversity (1-4 groups). To estimate pathogen infection of the plant communities, we visually assessed pathogen-group presence (i.e., rusts, powdery mildews, downy mildews, smuts, and leaf-spot diseases) and overall infection levels (combining incidence and severity of each pathogen group) in 82 experimental plots on all aboveground organs of all plant species per plot during four surveys in 2006. Pathogen diversity, assessed as the cumulative number of pathogen groups on all plant species per plot, increased log-linearly with plant species diversity. However, pathogen incidence and severity, and hence overall infection, decreased with increasing plant species diversity. In addition, co-infection of plant individuals by two or more pathogen groups was less likely with increasing plant community diversity. We conclude that plant community diversity promotes pathogen-community diversity while at the same time reducing pathogen infection levels of plant individuals.}, language = {en} } @misc{RojasJimenezGrossartCordesetal.2020, author = {Rojas-Jimenez, Keilor and Grossart, Hans-Peter and Cordes, Erik and Cort{\´e}s, Jorge}, title = {Fungal Communities in Sediments Along a Depth Gradient in the Eastern Tropical Pacific}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {1013}, issn = {1866-8372}, doi = {10.25932/publishup-48236}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-482360}, pages = {11}, year = {2020}, abstract = {Deep waters represent the largest biome on Earth and the largest ecosystem of Costa Rica. Fungi play a fundamental role in global biogeochemical cycling in marine sediments, yet, they remain little explored. We studied fungal diversity and community composition in several marine sediments from 16 locations sampled along a bathymetric gradient (from a depth of 380 to 3,474 m) in two transects of about 1,500 km length in the Eastern Tropical Pacific (ETP) of Costa Rica. Sequence analysis of the V7-V8 region of the 18S rRNA gene obtained from sediment cores revealed the presence of 787 fungal amplicon sequence variants (ASVs). On average, we detected a richness of 75 fungal ASVs per sample. Ascomycota represented the most abundant phylum with Saccharomycetes constituting the dominant class. Three ASVs accounted for ca. 63\% of all fungal sequences: the yeast Metschnikowia (49.4\%), Rhizophydium (6.9\%), and Cladosporium (6.7\%). We distinguished a cluster composed mainly by yeasts, and a second cluster by filamentous fungi, but we were unable to detect a strong effect of depth and the overlying water temperature, salinity, dissolved oxygen (DO), and pH on the composition of fungal communities. We highlight the need to understand further the ecological role of fungi in deep-sea ecosystems.}, language = {en} } @article{RojasJimenezGrossartCordesetal.2020, author = {Rojas-Jimenez, Keilor and Grossart, Hans-Peter and Cordes, Erik and Cort{\´e}s, Jorge}, title = {Fungal Communities in Sediments Along a Depth Gradient in the Eastern Tropical Pacific}, series = {Frontiers in Microbiology}, volume = {11}, journal = {Frontiers in Microbiology}, publisher = {Frontiers Media}, address = {Lausanne}, issn = {1664-302X}, doi = {10.3389/fmicb.2020.575207}, pages = {9}, year = {2020}, abstract = {Deep waters represent the largest biome on Earth and the largest ecosystem of Costa Rica. Fungi play a fundamental role in global biogeochemical cycling in marine sediments, yet, they remain little explored. We studied fungal diversity and community composition in several marine sediments from 16 locations sampled along a bathymetric gradient (from a depth of 380 to 3,474 m) in two transects of about 1,500 km length in the Eastern Tropical Pacific (ETP) of Costa Rica. Sequence analysis of the V7-V8 region of the 18S rRNA gene obtained from sediment cores revealed the presence of 787 fungal amplicon sequence variants (ASVs). On average, we detected a richness of 75 fungal ASVs per sample. Ascomycota represented the most abundant phylum with Saccharomycetes constituting the dominant class. Three ASVs accounted for ca. 63\% of all fungal sequences: the yeast Metschnikowia (49.4\%), Rhizophydium (6.9\%), and Cladosporium (6.7\%). We distinguished a cluster composed mainly by yeasts, and a second cluster by filamentous fungi, but we were unable to detect a strong effect of depth and the overlying water temperature, salinity, dissolved oxygen (DO), and pH on the composition of fungal communities. We highlight the need to understand further the ecological role of fungi in deep-sea ecosystems.}, language = {en} } @phdthesis{Riedl2021, author = {Riedl, Simon}, title = {Active tectonics in the Kenya Rift}, doi = {10.25932/publishup-53855}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-538552}, school = {Universit{\"a}t Potsdam}, pages = {xi, 207}, year = {2021}, abstract = {Magmatische und tektonisch aktive Grabenzonen (Rifts) stellen die Vorstufen entstehender Plattengrenzen dar. Diese sich spreizenden tektonischen Provinzen zeichnen sich durch allgegenw{\"a}rtige Abschiebungen aus, und die r{\"a}umliche Verteilung, die Geometrie, und das Alter dieser Abschiebungen l{\"a}sst R{\"u}ckschl{\"u}sse auf die r{\"a}umlichen und zeitlichen Zusammenh{\"a}nge zwischen tektonischer Deformation, Magmatismus und langwelliger Krustendeformation in Rifts zu. Diese Arbeit konzentriert sich auf die St{\"o}rungsaktivit{\"a}t im Kenia-Rift des k{\"a}nozoischen Ostafrikanischen Grabensystems im Zeitraum zwischen dem mittleren Pleistoz{\"a}n und dem Holoz{\"a}n. Um die fr{\"u}hen Stadien der Entstehung kontinentaler Plattengrenzen zu untersuchen, wird in dieser Arbeit eine zeitlich gemittelte minimale Extensionsrate f{\"u}r den inneren Graben des N{\"o}rdlichen Kenia-Rifts (NKR) f{\"u}r die letzten 0,5 Mio Jahre abgeleitet. Die Analyse beruht auf Messungen mit Hilfe des digitalen TanDEM-X-H{\"o}henmodells, um die Abschiebungen entlang der vulkanisch-tektonischen Achse des inneren Grabens des NKR zu kartieren und deren Versatzbetr{\"a}ge zu bestimmen. Mithilfe von vorhandenen Geochronologiedaten der deformierten vulkanischen Einheiten sowie in dieser Arbeit erstellten ⁴⁰Ar/³⁹Ar-Datierungen werden zeitlich gemittelte Extensionsraten berechnet. Die Auswertungen zeigen, dass im inneren Graben des NKR die langfristige Extensionsrate f{\"u}r mittelpleistoz{\"a}ne bis rezente St{\"o}rungen Mindestwerte von 1,0 bis 1,6 mm yr⁻¹ aufweist und lokal allerdings auch Werte bis zu 2,0 mm yr⁻¹ existieren. In Anbetracht der nahezu inaktiven Randst{\"o}rungen des NKR zeigt sich somit, dass sich die Extension auf die Region der aktiven vulkanisch-tektonischen Achse im inneren Graben konzentriert und somit ein fortgeschrittenes Stadium kontinentaler Extensionsprozesse im NKR vorliegt. In dieser Arbeit wird diese r{\"a}umlich fokussierte Extension zudem im Rahmen einer St{\"o}rungsanalyse der j{\"u}ngsten vulkanischen Erscheinungen des Kenia-Rifts betrachtet. Die Arbeit analysiert mithilfe von Gel{\"a}ndekartierungen und eines auf Luftbildern basierenden Gel{\"a}ndemodells die St{\"o}rungscharakteristika der etwa 36 tausend Jahre alten Menengai-Kaldera und der umliegenden Gebiete im zentralen Kenia-Rift. Im Allgemeinen sind die holoz{\"a}nen St{\"o}rungen innerhalb des Rifts reine, NNO-streichende Abschiebungen, die somit das gegenw{\"a}rtige tektonische Spannungsfeld wiederspiegeln; innerhalb der Menengai-Kaldera sind die jungen Strukturen jedoch von andauernder magmatischer Aktivit{\"a}t und von Aufdomung {\"u}berpr{\"a}gt. Die Kaldera befindet sich im Zentrum eines sich aktiv dehnenden Riftsegments und zusammen mit den anderen quart{\"a}ren Vulkanen des Kenia-Rifts lassen sich diese Bereiche als Kernpunkte der extensionalen St{\"o}rungsaktivit{\"a}t verstehen, die letztlich zu einer weiter entwickelten Phase magmengest{\"u}tzter Kontinentalseparation f{\"u}hren werden. Die bereits seit dem Terti{\"a}r andauernde St{\"o}rungsaktivit{\"a}t im Kenia-Rift f{\"u}hrt zur Zergliederung der gr{\"o}ßeren Rift-Senken in kleinere Segmente und beeinflusst die Sedimentologie und die Hydrologie dieser Riftbecken. Gegenw{\"a}rtig sind die meisten, durch St{\"o}rungen begrenzten Becken des Kenia-Rifts hydrologisch isoliert, sie waren aber w{\"a}hrend feuchter Klimaphasen hydrologisch miteinander verbunden; in dieser Arbeit untersuche ich deshalb auch diese hydrologische Verbindung der Rift-Becken f{\"u}r die Zeit der Afrikanischen Feuchteperiode des fr{\"u}hen Holoz{\"a}ns. Mithilfe der Analyse von digitalen Gel{\"a}ndemodellen, unter Ber{\"u}cksichtigung von geomorphologischen Anzeigern f{\"u}r Seespiegelhochst{\"a}nde, Radiokarbondatierungen und einer {\"U}bersicht {\"u}ber Fossiliendaten konnten zwei kaskadierende Flusssysteme aus diesen Daten abgeleitet werden: eine Flusskaskade in Richtung S{\"u}den und eine in Richtung Norden. Beide Kaskaden haben die derzeit isolierten Becken w{\"a}hrend des fr{\"u}hen Holoz{\"a}ns durch {\"u}berlaufende Seen und eingeschnittene Schluchten miteinander verbunden. Diese hydrologische Verbindung f{\"u}hrte zu der Ausbreitung aquatischer Fauna entlang des Rifts, und gleichzeitig stellte die Wasserscheide zwischen den beiden Flusssystemen den einzigen terrestrischen Ausbreitungskorridor dar, der eine {\"U}berquerung des Kenia-Rifts erm{\"o}glichte. Diese tektonisch-geomorphologische Rekonstruktion erkl{\"a}rt die heute isolierten Vorkommen nilotischer Fischarten in den Riftseen Kenias sowie die isolierten Vorkommen Guineo-Congolischer S{\"a}ugetiere in W{\"a}ldern {\"o}stlich des Kenia-Rifts, die sich {\"u}ber die Wasserscheide im Kenia-Rift ausbreiten konnten. Auf l{\"a}ngeren Zeitskalen sind solche Phasen hydrologischer Verbindung und Phasen der Isolation wiederholt aufgetreten und zeigen sich in wechselnden pal{\"a}o{\"o}kologischen Indikatoren in Sedimentbohrkernen. Hier stelle ich einen Sedimentbohrkern aus dem Koora-Becken des S{\"u}dlichen Kenia-Rifts vor, der einen Datensatz der Pal{\"a}o-Umweltbedingungen der letzten 1 Million Jahre beinhaltet. Dieser Datensatz zeigt, dass etwa vor 400 tausend Jahren die zuvor relativ stabilen Umweltbedingungen zum Erliegen kamen und tektonische, hydrologische und {\"o}kologische Ver{\"a}nderungen dazu f{\"u}hrten, dass die Wasserverf{\"u}gbarkeit, die Grasland-Vergesellschaftungen und die Bedeckung durch Baumvegetation zunehmend st{\"a}rkeren und h{\"a}ufigeren Schwankungen unterlagen. Diese großen Ver{\"a}nderungen fallen zeitlich mit Phasen zusammen, in denen das s{\"u}dliche Becken des Kenia-Rifts von vulkanischer und tektonischer Aktivit{\"a}t besonders betroffen war. Die vorliegende Arbeit zeigt deshalb deutlich, inwiefern die tektonischen und geomorphologischen Gegebenheiten im Zuge einer zeitlich langanhaltenden Extension die Hydrologie, die Pal{\"a}o-Umweltbedingungen sowie die Biodiversit{\"a}t einer Riftzone beeinflussen k{\"o}nnen.}, language = {en} } @phdthesis{Raatz2019, author = {Raatz, Michael}, title = {Strategies within predator-prey interactions - from individuals to ecosystems}, doi = {10.25932/publishup-42658}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-426587}, school = {Universit{\"a}t Potsdam}, pages = {175}, year = {2019}, abstract = {Predator-prey interactions provide central links in food webs. These interaction are directly or indirectly impacted by a number of factors. These factors range from physiological characteristics of individual organisms, over specifics of their interaction to impacts of the environment. They may generate the potential for the application of different strategies by predators and prey. Within this thesis, I modelled predator-prey interactions and investigated a broad range of different factors driving the application of certain strategies, that affect the individuals or their populations. In doing so, I focused on phytoplankton-zooplankton systems as established model systems of predator-prey interactions. At the level of predator physiology I proposed, and partly confirmed, adaptations to fluctuating availability of co-limiting nutrients as beneficial strategies. These may allow to store ingested nutrients or to regulate the effort put into nutrient assimilation. We found that these two strategies are beneficial at different fluctuation frequencies of the nutrients, but may positively interact at intermediate frequencies. The corresponding experiments supported our model results. We found that the temporal structure of nutrient fluctuations indeed has strong effects on the juvenile somatic growth rate of {\itshape Daphnia}. Predator colimitation by energy and essential biochemical nutrients gave rise to another physiological strategy. High-quality prey species may render themselves indispensable in a scenario of predator-mediated coexistence by being the only source of essential biochemical nutrients, such as cholesterol. Thereby, the high-quality prey may even compensate for a lacking defense and ensure its persistence in competition with other more defended prey species. We found a similar effect in a model where algae and bacteria compete for nutrients. Now, being the only source of a compound that is required by the competitor (bacteria) prevented the competitive exclusion of the algae. In this case, the essential compounds were the organic carbon provided by the algae. Here again, being indispensable served as a prey strategy that ensured its coexistence. The latter scenario also gave rise to the application of the two metabolic strategies of autotrophy and heterotrophy by algae and bacteria, respectively. We found that their coexistence allowed the recycling of resources in a microbial loop that would otherwise be lost. Instead, these resources were made available to higher trophic levels, increasing the trophic transfer efficiency in food webs. The predation process comprises the next higher level of factors shaping the predator-prey interaction, besides these factors that originated from the functioning or composition of individuals. Here, I focused on defensive mechanisms and investigated multiple scenarios of static or adaptive combinations of prey defense and predator offense. I confirmed and extended earlier reports on the coexistence-promoting effects of partially lower palatability of the prey community. When bacteria and algae are coexisting, a higher palatability of bacteria may increase the average predator biomass, with the side effect of making the population dynamics more regular. This may facilitate experimental investigations and interpretations. If defense and offense are adaptive, this allows organisms to maximize their growth rate. Besides this fitness-enhancing effect, I found that co-adaptation may provide the predator-prey system with the flexibility to buffer external perturbations. On top of these rather internal factors, environmental drivers also affect predator-prey interactions. I showed that environmental nutrient fluctuations may create a spatio-temporal resource heterogeneity that selects for different predator strategies. I hypothesized that this might favour either storage or acclimation specialists, depending on the frequency of the environmental fluctuations. We found that many of these factors promote the coexistence of different strategies and may therefore support and sustain biodiversity. Thus, they might be relevant for the maintenance of crucial ecosystem functions that also affect us humans. Besides this, the richness of factors that impact predator-prey interactions might explain why so many species, especially in the planktonic regime, are able to coexist.}, language = {en} } @misc{MooijTrolleJeppesenetal.2010, author = {Mooij, Wolf M. and Trolle, Dennis and Jeppesen, Erik and Arhonditsis, George B. and Belolipetsky, Pavel V. and Chitamwebwa, Deonatus B. R. and Degermendzhy, Andrey G. and DeAngelis, Donald L. and Domis, Lisette Nicole de Senerpont and Downing, Andrea S. and Elliott, J. Alex and Fragoso Jr., Carlos Ruberto and Gaedke, Ursula and Genova, Svetlana N. and Gulati, Ramesh D. and H{\aa}kanson, Lars and Hamilton, David P. and Hipsey, Matthew R. and 't Hoen, Jochem and H{\"u}lsmann, Stephan and Los, F. Hans and Makler-Pick, Vardit and Petzoldt, Thomas and Prokopkin, Igor G. and Rinke, Karsten and Schep, Sebastiaan A. and Tominaga, Koji and Van Dam, Anne A. and Van Nes, Egbert H. and Wells, Scott A. and Janse, Jan H.}, title = {Challenges and opportunities for integrating lake ecosystem modelling approaches}, series = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {1326}, issn = {1866-8372}, doi = {10.25932/publishup-42983}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-429839}, pages = {35}, year = {2010}, abstract = {A large number and wide variety of lake ecosystem models have been developed and published during the past four decades. We identify two challenges for making further progress in this field. One such challenge is to avoid developing more models largely following the concept of others ('reinventing the wheel'). The other challenge is to avoid focusing on only one type of model, while ignoring new and diverse approaches that have become available ('having tunnel vision'). In this paper, we aim at improving the awareness of existing models and knowledge of concurrent approaches in lake ecosystem modelling, without covering all possible model tools and avenues. First, we present a broad variety of modelling approaches. To illustrate these approaches, we give brief descriptions of rather arbitrarily selected sets of specific models. We deal with static models (steady state and regression models), complex dynamic models (CAEDYM, CE-QUAL-W2, Delft 3D-ECO, LakeMab, LakeWeb, MyLake, PCLake, PROTECH, SALMO), structurally dynamic models and minimal dynamic models. We also discuss a group of approaches that could all be classified as individual based: super-individual models (Piscator, Charisma), physiologically structured models, stage-structured models and traitbased models. We briefly mention genetic algorithms, neural networks, Kalman filters and fuzzy logic. Thereafter, we zoom in, as an in-depth example, on the multi-decadal development and application of the lake ecosystem model PCLake and related models (PCLake Metamodel, Lake Shira Model, IPH-TRIM3D-PCLake). In the discussion, we argue that while the historical development of each approach and model is understandable given its 'leading principle', there are many opportunities for combining approaches. We take the point of view that a single 'right' approach does not exist and should not be strived for. Instead, multiple modelling approaches, applied concurrently to a given problem, can help develop an integrative view on the functioning of lake ecosystems. We end with a set of specific recommendations that may be of help in the further development of lake ecosystem models.}, language = {en} } @article{MooijTrolleJeppesenetal.2010, author = {Mooij, Wolf M. and Trolle, Dennis and Jeppesen, Erik and Arhonditsis, George B. and Belolipetsky, Pavel V. and Chitamwebwa, Deonatus B. R. and Degermendzhy, Andrey G. and DeAngelis, Donald L. and Domis, Lisette Nicole de Senerpont and Downing, Andrea S. and Elliott, J. Alex and Fragoso Jr, Carlos Ruberto and Gaedke, Ursula and Genova, Svetlana N. and Gulati, Ramesh D. and H{\aa}kanson, Lars and Hamilton, David P. and Hipsey, Matthew R. and 't Hoen, Jochem and H{\"u}lsmann, Stephan and Los, F. Hans and Makler-Pick, Vardit and Petzoldt, Thomas and Prokopkin, Igor G. and Rinke, Karsten and Schep, Sebastiaan A. and Tominaga, Koji and Van Dam, Anne A. and Van Nes, Egbert H. and Wells, Scott A. and Janse, Jan H.}, title = {Challenges and opportunities for integrating lake ecosystem modelling approaches}, series = {Aquatic ecology}, volume = {44}, journal = {Aquatic ecology}, publisher = {Springer Science + Business Media B.V.}, address = {Dordrecht}, issn = {1573-5125}, doi = {10.1007/s10452-010-9339-3}, pages = {633 -- 667}, year = {2010}, abstract = {A large number and wide variety of lake ecosystem models have been developed and published during the past four decades. We identify two challenges for making further progress in this field. One such challenge is to avoid developing more models largely following the concept of others ('reinventing the wheel'). The other challenge is to avoid focusing on only one type of model, while ignoring new and diverse approaches that have become available ('having tunnel vision'). In this paper, we aim at improving the awareness of existing models and knowledge of concurrent approaches in lake ecosystem modelling, without covering all possible model tools and avenues. First, we present a broad variety of modelling approaches. To illustrate these approaches, we give brief descriptions of rather arbitrarily selected sets of specific models. We deal with static models (steady state and regression models), complex dynamic models (CAEDYM, CE-QUAL-W2, Delft 3D-ECO, LakeMab, LakeWeb, MyLake, PCLake, PROTECH, SALMO), structurally dynamic models and minimal dynamic models. We also discuss a group of approaches that could all be classified as individual based: super-individual models (Piscator, Charisma), physiologically structured models, stage-structured models and traitbased models. We briefly mention genetic algorithms, neural networks, Kalman filters and fuzzy logic. Thereafter, we zoom in, as an in-depth example, on the multi-decadal development and application of the lake ecosystem model PCLake and related models (PCLake Metamodel, Lake Shira Model, IPH-TRIM3D-PCLake). In the discussion, we argue that while the historical development of each approach and model is understandable given its 'leading principle', there are many opportunities for combining approaches. We take the point of view that a single 'right' approach does not exist and should not be strived for. Instead, multiple modelling approaches, applied concurrently to a given problem, can help develop an integrative view on the functioning of lake ecosystems. We end with a set of specific recommendations that may be of help in the further development of lake ecosystem models.}, language = {en} } @phdthesis{MendesFerreira2023, author = {Mendes Ferreira, Clara}, title = {Indirect, tri-trophic effects of fear on biodiversity}, doi = {10.25932/publishup-61102}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-611020}, school = {Universit{\"a}t Potsdam}, pages = {119}, year = {2023}, abstract = {Predator-forager interactions are a major factor in evolutionary adaptation of many species, as predators need to gain energy by consuming prey species, and foragers needs to avoid the worst fate of mortality while still consuming resources for energetic gains. In this evolutionary arms race, the foragers have constantly evolved anti-predator behaviours (e.g. foraging activity changes). To describe all these complex changes, researchers developed the framework of the landscape of fear, that is, the spatio-temporal variation of perceived predation risk. This concept simplifies all the involved ecological processes into one framework, by integrating animal biology and distribution with habitat characteristics. Researchers can then evaluate the perception of predation risk in prey species, what are the behavioural responses of the prey and, therefore, understand the cascading effects of landscapes of fear at the resource levels (tri-trophic effects). Although tri-trophic effects are well studied at the predator-prey interaction level, little is known on how the forager-resource interactions are part of the overall cascading effects of landscapes of fear, despite the changes of forager feeding behaviour - that occur with perceived predation risk - affecting directly the level of the resources. This thesis aimed to evaluate the cascading effects of the landscape of fear on biodiversity of resources, and how the feeding behaviour and movement of foragers shaped the final resource species composition (potential coexistence mechanisms). We studied the changes caused by landscapes of fear on wild and captive rodent communities and evaluated: the cascading effects of different landscapes of fear on a tri-trophic system (I), the effects of fear on a forager's movement patterns and dietary preferences (II) and cascading effects of different types of predation risk (terrestrial versus avian, III). In Chapter I, we applied a novel measure to evaluate the cascading effects of fear at the level of resources, by quantifying the diversity of resources left after the foragers gave-up on foraging (diversity at the giving-up density). We tested the measure at different spatial levels (local and regional) and observed that with decreased perceived predation risk, the density and biodiversity of resources also decreased. Foragers left a very dissimilar community of resources based on perceived risk and resources functional traits, and therefore acted as an equalising mechanism. In Chapter II, we wanted to understand further the decision-making processes of rodents in different landscapes of fear, namely, in which resource species rodents decided to forage on (based on three functional traits: size, nutrients and shape) and how they moved depending on perceived predation risk. In safe landscapes, individuals increased their feeding activity and movements and despite the increased costs, they visited more often patches that were further away from their central-place. Despite a preference for the bigger resources regardless of risk, when perceived predation risk was low, individuals changed their preference to fat-rich resources. In Chapter III, we evaluated the cascading effects of two different types of predation risk in rodents: terrestrial (raccoon) versus avian predation risk. Raccoon presence or absence did not alter the rodents feeding behaviour in different landscapes of fear. Rodent's showed risk avoidance behaviours towards avian predators (spatial risk avoidance), but not towards raccoons (lack of temporal risk avoidance). By analysing the effects of fear in tri-trophic systems, we were able to deepen the knowledge of how non-consumptive effects of predators affect the behaviour of foragers, and quantitatively measure the cascading effects at the level of resources with a novel measure. Foragers are at the core of the ecological processes and responses to the landscape of fear, acting as variable coexistence agents for resource species depending on perceived predation risk. This newly found measures and knowledge can be applied to more trophic chains, and inform researchers on biodiversity patterns originating from landscapes of fear.}, language = {en} } @article{LozadaGobilardStangPirhoferWalzletal.2019, author = {Lozada Gobilard, Sissi Donna and Stang, Susanne and Pirhofer-Walzl, Karin and Kalettka, Thomas and Heinken, Thilo and Schr{\"o}der, Boris and Eccard, Jana and Joshi, Jasmin Radha}, title = {Environmental filtering predicts plant-community trait distribution and diversity}, series = {Ecology and evolution}, volume = {9}, journal = {Ecology and evolution}, number = {4}, publisher = {Wiley}, address = {Hoboken}, issn = {2045-7758}, doi = {10.1002/ece3.4883}, pages = {1898 -- 1910}, year = {2019}, abstract = {Meta-communities of habitat islands may be essential to maintain biodiversity in anthropogenic landscapes allowing rescue effects in local habitat patches. To understand the species-assembly mechanisms and dynamics of such ecosystems, it is important to test how local plant-community diversity and composition is affected by spatial isolation and hence by dispersal limitation and local environmental conditions acting as filters for local species sorting.We used a system of 46 small wetlands (kettle holes)natural small-scale freshwater habitats rarely considered in nature conservation policiesembedded in an intensively managed agricultural matrix in northern Germany. We compared two types of kettle holes with distinct topographies (flat-sloped, ephemeral, frequently plowed kettle holes vs. steep-sloped, more permanent ones) and determined 254 vascular plant species within these ecosystems, as well as plant functional traits and nearest neighbor distances to other kettle holes.Differences in alpha and beta diversity between steep permanent compared with ephemeral flat kettle holes were mainly explained by species sorting and niche processes and mass effect processes in ephemeral flat kettle holes. The plant-community composition as well as the community trait distribution in terms of life span, breeding system, dispersal ability, and longevity of seed banks significantly differed between the two habitat types. Flat ephemeral kettle holes held a higher percentage of non-perennial plants with a more persistent seed bank, less obligate outbreeders and more species with seed dispersal abilities via animal vectors compared with steep-sloped, more permanent kettle holes that had a higher percentage of wind-dispersed species. In the flat kettle holes, plant-species richness was negatively correlated with the degree of isolation, whereas no such pattern was found for the permanent kettle holes.Synthesis: Environment acts as filter shaping plant diversity (alpha and beta) and plant-community trait distribution between steep permanent compared with ephemeral flat kettle holes supporting species sorting and niche mechanisms as expected, but we identified a mass effect in ephemeral kettle holes only. Flat ephemeral kettle holes can be regarded as meta-ecosystems that strongly depend on seed dispersal and recruitment from a seed bank, whereas neighboring permanent kettle holes have a more stable local species diversity.}, language = {en} }