@article{ŠedovaKalkuhl2020,
  author    = {Šedov{\´a}, Barbora and Kalkuhl, Matthias},
  title     = {Who are the climate migrants and where do they go?},
  series = {World development},
  volume    = {129},
  journal   = {World development},
  publisher = {Elsevier Science},
  address   = {Amsterdam},
  issn      = {0305-750X},
  doi       = {10.1016/j.worlddev.2019.104848},
  pages     = {19},
  year      = {2020},
  abstract  = {In this paper, we move from the large strand of research that looks at evidence of climate migration to the questions: who are the climate migrants? and where do they go? These questions are crucial to design policies that mitigate welfare losses of migration choices due to climate change. We study the direct and heterogeneous associations between weather extremes and migration in rural India. We combine ERAS reanalysis data with the India Human Development Survey household panel and conduct regression analyses by applying linear probability and multinomial logit models. This enables us to establish a causal relationship between temperature and precipitation anomalies and overall migration as well as migration by destination. We show that adverse weather shocks decrease rural-rural and international migration and push people into cities in different, presumably more prosperous states. A series of positive weather shocks, however, facilitates international migration and migration to cities within the same state. Further, our results indicate that in contrast to other migrants, climate migrants are likely to be from the lower end of the skill distribution and from households strongly dependent on agricultural production. We estimate that approximately 8\% of all rural-urban moves between 2005 and 2012 can be attributed to weather. This figure might increase as a consequence of climate change. Thus, a key policy recommendation is to take steps to facilitate integration of less educated migrants into the urban labor market.},
  language  = {en}
}
@misc{Şener2017,
  author    = {Şener, Ula{\c{s}}},
  title     = {Rodrik, Dani (2015): Economics Rules: The Rights and Wrongs of the Dismal Science / rezensiert von Ula{\c{s}} Şener},
  series = {European journal of economics and economic policies : intervention ; EJEEP},
  volume    = {14},
  journal   = {European journal of economics and economic policies : intervention ; EJEEP},
  publisher = {Elgar},
  address   = {Cheltenham},
  issn      = {2052-7764},
  doi       = {10.4337/ejeep.2017.03.08},
  pages     = {375 -- 377},
  year      = {2017},
  language  = {en}
}
@article{ŚlęzakMetzlerMagdziarz2018,
  author    = {Ślęzak, Jakub and Metzler, Ralf and Magdziarz, Marcin},
  title     = {Superstatistical generalised Langevin equation},
  series = {New Journal of Physics},
  volume    = {20},
  journal   = {New Journal of Physics},
  number    = {023026},
  publisher = {Deutsche Physikalische Gesellschaft / Institute of Physics},
  address   = {Bad Honnef und London},
  issn      = {1367-2630},
  doi       = {10.1088/1367-2630/aaa3d4},
  pages     = {1 -- 25},
  year      = {2018},
  abstract  = {Recent advances in single particle tracking and supercomputing techniques demonstrate the emergence of normal or anomalous, viscoelastic diffusion in conjunction with non-Gaussian distributions in soft, biological, and active matter systems. We here formulate a stochastic model based on a generalised Langevin equation in which non-Gaussian shapes of the probability density function and normal or anomalous diffusion have a common origin, namely a random parametrisation of the stochastic force. We perform a detailed analysis demonstrating how various types of parameter distributions for the memory kernel result in exponential, power law, or power-log law tails of the memory functions. The studied system is also shown to exhibit a further unusual property: the velocity has a Gaussian one point probability density but non-Gaussian joint distributions. This behaviour is reflected in the relaxation from a Gaussian to a non-Gaussian distribution observed for the position variable. We show that our theoretical results are in excellent agreement with stochastic simulations.},
  language  = {en}
}
@article{ŚlęzakMetzlerMagdziarz2019,
  author    = {Ślęzak, Jakub and Metzler, Ralf and Magdziarz, Marcin},
  title     = {Codifference can detect ergodicity breaking and non-Gaussianity},
  series = {New Journal of Physics},
  volume    = {21},
  journal   = {New Journal of Physics},
  publisher = {Deutsche Physikalische Gesellschaft},
  address   = {Bad Honnef},
  issn      = {1367-2630},
  doi       = {10.1088/1367-2630/ab13f3},
  pages     = {25},
  year      = {2019},
  abstract  = {We show that the codifference is a useful tool in studying the ergodicity breaking and non-Gaussianity properties of stochastic time series. While the codifference is a measure of dependence that was previously studied mainly in the context of stable processes, we here extend its range of applicability to random-parameter and diffusing-diffusivity models which are important in contemporary physics, biology and financial engineering. We prove that the codifference detects forms of dependence and ergodicity breaking which are not visible from analysing the covariance and correlation functions. We also discuss a related measure of dispersion, which is a nonlinear analogue of the mean squared displacement.},
  language  = {en}
}
@article{ŚlęzakBurneckiMetzler2019,
  author    = {Ślęzak, Jakub and Burnecki, Krzysztof and Metzler, Ralf},
  title     = {Random coefficient autoregressive processes describe Brownian yet non-Gaussian diffusion in heterogeneous systems},
  series = {New Journal of Physics},
  volume    = {21},
  journal   = {New Journal of Physics},
  publisher = {Deutsche Physikalische Gesellschaft ; IOP, Institute of Physics},
  address   = {Bad Honnef und London},
  issn      = {1367-2630},
  doi       = {10.1088/1367-2630/ab3366},
  pages     = {18},
  year      = {2019},
  abstract  = {Many studies on biological and soft matter systems report the joint presence of a linear mean-squared displacement and a non-Gaussian probability density exhibiting, for instance, exponential or stretched-Gaussian tails. This phenomenon is ascribed to the heterogeneity of the medium and is captured by random parameter models such as 'superstatistics' or 'diffusing diffusivity'. Independently, scientists working in the area of time series analysis and statistics have studied a class of discrete-time processes with similar properties, namely, random coefficient autoregressive models. In this work we try to reconcile these two approaches and thus provide a bridge between physical stochastic processes and autoregressive models.Westart from the basic Langevin equation of motion with time-varying damping or diffusion coefficients and establish the link to random coefficient autoregressive processes. By exploring that link we gain access to efficient statistical methods which can help to identify data exhibiting Brownian yet non-Gaussian diffusion.},
  language  = {en}
}
@article{UestuenSheikhGimenezIbanezetal.2016,
  author    = {{\"U}st{\"u}n, Suayib and Sheikh, Arsheed and Gimenez-Ibanez, Selena and Jones, Alexandra and Ntoukakis, Vardis and B{\"o}rnke, Frederik},
  title     = {The Proteasome Acts as a Hub for Plant Immunity and Is Targeted by Pseudomonas Type III Effectors},
  series = {Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants},
  volume    = {172},
  journal   = {Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants},
  publisher = {American Society of Plant Physiologists},
  address   = {Rockville},
  issn      = {0032-0889},
  doi       = {10.1104/pp.16.00808},
  pages     = {1941 -- 1958},
  year      = {2016},
  abstract  = {Recent evidence suggests that the ubiquitin-proteasome system is involved in several aspects of plant immunity and that a range of plant pathogens subvert the ubiquitin-proteasome system to enhance their virulence. Here, we show that proteasome activity is strongly induced during basal defense in Arabidopsis (Arabidopsis thaliana). Mutant lines of the proteasome subunits RPT2a and RPN12a support increased bacterial growth of virulent Pseudomonas syringae pv tomato DC3000 (Pst) and Pseudomonas syringae pv maculicola ES4326. Both proteasome subunits are required for pathogen-associated molecular pattern-triggered immunity responses. Analysis of bacterial growth after a secondary infection of systemic leaves revealed that the establishment of systemic acquired resistance (SAR) is impaired in proteasome mutants, suggesting that the proteasome also plays an important role in defense priming and SAR. In addition, we show that Pst inhibits proteasome activity in a type III secretion-dependent manner. A screen for type III effector proteins from Pst for their ability to interfere with proteasome activity revealed HopM1, HopAO1, HopA1, and HopG1 as putative proteasome inhibitors. Biochemical characterization of HopM1 by mass spectrometry indicates that HopM1 interacts with several E3 ubiquitin ligases and proteasome subunits. This supports the hypothesis that HopM1 associates with the proteasome, leading to its inhibition. Thus, the proteasome is an essential component of pathogen-associated molecular pattern-triggered immunity and SAR, which is targeted by multiple bacterial effectors.},
  language  = {en}
}
@article{UestuenBartetzkoBoernke2015,
  author    = {{\"U}st{\"u}n, Suayib and Bartetzko, Verena and B{\"o}rnke, Frederik},
  title     = {The Xanthomonas effector XopJ triggers a conditional hypersensitive response upon treatment of N. benthamiana leaves with salicylic acid},
  series = {Frontiers in plant science},
  volume    = {6},
  journal   = {Frontiers in plant science},
  publisher = {Frontiers Research Foundation},
  address   = {Lausanne},
  issn      = {1664-462X},
  doi       = {10.3389/fpls.2015.00599},
  pages     = {11},
  year      = {2015},
  abstract  = {XopJ is a Xanthomonas type III effector protein that promotes bacterial virulence on susceptible pepper plants through the inhibition of the host cell proteasome and a resultant suppression of salicylic acid (SA) - dependent defense responses. We show here that Nicotiana benthamiana leaves transiently expressing XopJ display hypersensitive response (HR) -like symptoms when exogenously treated with SA. This apparent avirulence function of XopJ was further dependent on effector myristoylation as well as on an intact catalytic triad, suggesting a requirement of its enzymatic activity for HR-like symptom elicitation. The ability of XopJ to cause a HR-like symptom development upon SA treatment was lost upon silencing of SGT1 and NDR1, respectively, but was independent of EDS1 silencing, suggesting that XopJ is recognized by an R protein of the CC-NBS-LRR class. Furthermore, silencing of NPR1 abolished the elicitation of HR-like symptoms in XopJ expressing leaves after SA application. Measurement of the proteasome activity indicated that proteasome inhibition by XopJ was alleviated in the presence of SA, an effect that was not observed in NPR1 silenced plants. Our results suggest that XopJ - triggered HR-like symptoms are closely related to the virulence function of the effector and that XopJ follows a two-signal model in order to elicit a response in the non-host plant N. benthamiana.},
  language  = {en}
}
@phdthesis{Uensal2009,
  author    = {{\"U}nsal, Feyzan},
  title     = {Politische und religi{\"o}se Symbole im Betrieb : eine rechtsvergleichende Studie zum deutschen und t{\"u}rkischen Recht},
  series = {Europ{\"a}ische Hochschulschriften : Reihe 2, Rechtswissenschaft},
  volume    = {4926},
  journal   = {Europ{\"a}ische Hochschulschriften : Reihe 2, Rechtswissenschaft},
  publisher = {Lang},
  address   = {Frankfurt am Main},
  isbn      = {978-3-631-59241-0},
  pages     = {585 S.},
  year      = {2009},
  language  = {de}
}
@article{OeztuerkMarwanvonSpechtetal.2018,
  author    = {{\"O}zt{\"u}rk, Ugur and Marwan, N. and von Specht, Sebastian and Korup, Oliver and Jensen, J.},
  title     = {A new centennial sea-level record for Antalya, Eastern Mediterranean},
  series = {Journal of geophysical research-oceans},
  volume    = {123},
  journal   = {Journal of geophysical research-oceans},
  number    = {7},
  publisher = {American Geophysical Union},
  address   = {Washington},
  issn      = {2169-9275},
  doi       = {10.1029/2018JC013906},
  pages     = {4503 -- 4517},
  year      = {2018},
  abstract  = {Quantitative estimates of sea-level rise in the Mediterranean Basin become increasingly accurate thanks to detailed satellite monitoring. However, such measuring campaigns cover several years to decades, while longer-term sea-level records are rare for the Mediterranean. We used a data archeological approach to reanalyze monthly mean sea-level data of the Antalya-I (1935-1977) tide gauge to fill this gap. We checked the accuracy and reliability of these data before merging them with the more recent records of the Antalya-II (1985-2009) tide gauge, accounting for an eight-year hiatus. We obtain a composite time series of monthly and annual mean sea levels spanning some 75 years, providing the longest record for the eastern Mediterranean Basin, and thus an essential tool for studying the region's recent sea-level trends. We estimate a relative mean sea-level rise of 2.2 ± 0.5 mm/year between 1935 and 2008, with an annual variability (expressed here as the standard deviation of the residuals, σresiduals = 41.4 mm) above that at the closest tide gauges (e.g., Thessaloniki, Greece, σresiduals = 29.0 mm). Relative sea-level rise accelerated to 6.0 ± 1.5 mm/year at Antalya-II; we attribute roughly half of this rate (~3.6 mm/year) to tectonic crustal motion and anthropogenic land subsidence. Our study highlights the value of data archeology for recovering and integrating historic tide gauge data for long-term sea-level and climate studies.},
  language  = {en}
}
@article{OezkanFikriKırkıcıetal.2020,
  author    = {{\"O}zkan, Ay{\c{s}}eg{\"u}l and Fikri, Figen Beken and K{\i}rk{\i}c{\i}, Bilal and Kliegl, Reinhold and Acart{\"u}rk, Cengiz},
  title     = {Eye movement control in Turkish sentence reading},
  series = {Quarterly journal of experimental psychology : QJEP / EPS, Experimental Psychology Society},
  volume    = {74},
  journal   = {Quarterly journal of experimental psychology : QJEP / EPS, Experimental Psychology Society},
  number    = {2},
  publisher = {Sage Publ.},
  address   = {London},
  issn      = {1747-0218},
  doi       = {10.1177/1747021820963310},
  pages     = {377 -- 397},
  year      = {2020},
  abstract  = {Reading requires the assembly of cognitive processes across a wide spectrum from low-level visual perception to high-level discourse comprehension. One approach of unravelling the dynamics associated with these processes is to determine how eye movements are influenced by the characteristics of the text, in particular which features of the words within the perceptual span maximise the information intake due to foveal, spillover, parafoveal, and predictive processing. One way to test the generalisability of current proposals of such distributed processing is to examine them across different languages. For Turkish, an agglutinative language with a shallow orthography-phonology mapping, we replicate the well-known canonical main effects of frequency and predictability of the fixated word as well as effects of incoming saccade amplitude and fixation location within the word on single-fixation durations with data from 35 adults reading 120 nine-word sentences. Evidence for previously reported effects of the characteristics of neighbouring words and interactions was mixed. There was no evidence for the expected Turkish-specific morphological effect of the number of inflectional suffixes on single-fixation durations. To control for word-selection bias associated with single-fixation durations, we also tested effects on word skipping, single-fixation, and multiple-fixation cases with a base-line category logit model, assuming an increase of difficulty for an increase in the number of fixations. With this model, significant effects of word characteristics and number of inflectional suffixes of foveal word on probabilities of the number of fixations were observed, while the effects of the characteristics of neighbouring words and interactions were mixed.},
  language  = {en}
}
@article{OezerScheffler2018,
  author    = {{\"O}zer, Aydan and Scheffler, Christiane},
  title     = {Affinity to host population stimulates physical growth in adult offspring of Turkish migrants in Germany},
  series = {Journal of biological and clinical anthropology},
  volume    = {74},
  journal   = {Journal of biological and clinical anthropology},
  number    = {5},
  publisher = {Schweizerbart},
  address   = {Stuttgart},
  issn      = {0003-5548},
  doi       = {10.1127/anthranz/2018/0825},
  pages     = {359 -- 364},
  year      = {2018},
  abstract  = {Because of political conflicts and climate change, migration will be increased worldwide and integration in host societies is a challenge also for migrants. We hypothesize that migrants, who take up the challenge in a new social environment are taller than migrants who do not pose this challenge. We analyze by a questionnaire possible social, nutritional and ethnic influencing factors to body height (BH) of adult offspring of Turkish migrants (n = 82, 39 males) aged from 18 to 34 years (mean age 24.6 years). The results of multiple regression (downward selection) show that the more a male adult offspring of Turkish migrants feels like belonging to the Turkish culture, the smaller he is (95\% CI, -3.79, -0.323). Further, the more a male adult offspring of Turkish migrants feels like belonging to the German culture, the taller he is (95\% CI, -0.152, 1.738). We discussed it comparable to primates taking up their challenge in dominance, where as a result their body size increase is associated with higher IGF-1 level. IGF-1 is associated with emotional belonging and has a fundamental role in the regulation of metabolism and growth of the human body. With all pilot characteristics of our study results show that the successful challenge of integration in a new society is strongly associated with the emotional integration and identification in the sense of a personal sense of belonging to society. We discuss taller BH as a signal of social growth adjustment. In this sense, a secular trend of BH adaptation of migrants to hosts is a sign of integration.},
  language  = {en}
}
@article{OezcanBookhagenMusaoglu2018,
  author    = {{\"O}zcan, Orkan and Bookhagen, Bodo and Musaoglu, Nebiye},
  title     = {Impact of the Ataturk Dam Lake on Agro-Meteorological Aspects of the Southeastern Anatolia Region, Turkey},
  series = {Journal of the Indian Society of Remote Sensing},
  volume    = {46},
  journal   = {Journal of the Indian Society of Remote Sensing},
  number    = {3},
  publisher = {Springer},
  address   = {New York},
  issn      = {0255-660X},
  doi       = {10.1007/s12524-017-0703-9},
  pages     = {471 -- 481},
  year      = {2018},
  abstract  = {In this study, the spatial and temporal impacts of the Ataturk Dam on agro-meteorological aspects of the Southeastern Anatolia region have been investigated. Change detection and environmental impacts due to water-reserve changes in Ataturk Dam Lake have been determined and evaluated using multi-temporal Landsat satellite imageries and meteorological datasets within a period of 1984-2011. These time series have been evaluated for three time periods. Dam construction period constitutes the first part of the study. Land cover/use changes especially on agricultural fields under the Ataturk Dam Lake and its vicinity have been identified between the periods of 1984-1992. The second period comprises the 10-year period after the completion of filling up the reservoir in 1992. At this period, Landsat and meteorological time-series analyses are examined to assess the impact of the Ataturk Dam Lake on selected irrigated agricultural areas. For the last 9-year period from 2002 to 2011, the relationships between seasonal water-reserve changes and irrigated plains under changing climatic factors primarily driving vegetation activity (monthly, seasonal, and annual fluctuations of rainfall rate, air temperature, humidity) on the watershed have been investigated using a 30-year meteorological time series. The results showed that approximately 368 km(2) of agricultural fields have been affected because of inundation due to the Ataturk Dam Lake. However, irrigated agricultural fields have been increased by 56.3\% of the total area (1552 of 2756 km(2)) on Harran Plain within the period of 1984-2011.},
  language  = {en}
}
@phdthesis{Oez2021,
  author    = {{\"O}z, Alpercan},
  title     = {Das Spannungsverh{\"a}ltnis zwischen dem Selbstbestimmungsrecht des Opfers und dem strafrechtlichen Lebensschutz},
  series = {Neue Juristische Beitr{\"a}ge},
  journal   = {Neue Juristische Beitr{\"a}ge},
  number    = {133},
  publisher = {utzverlag GmbH},
  address   = {M{\"u}nchen},
  isbn      = {978-3-8316-4895-5},
  pages     = {XII, 268},
  year      = {2021},
  abstract  = {Unser modernes Strafrechtsbild ist gepr{\"a}gt von dem Gedanken, dass das Strafrecht den B{\"u}rgern ein freies und friedliches Zusammenleben unter Gew{\"a}hrleistung aller verfassungsrechtlich garantierten Grundrechte sichert. Der Einsatz des Strafrechts bedarf der Legitimation und darf nicht aus moralischen Vorstellungen oder Gedanken abgeleitet werden. Strafbar kann es demnach nicht sein, wenn ein Rechtsgutstr{\"a}ger {\"u}ber ein ihm disponibles Rechtsgut frei verf{\"u}gt. Oftmals stehen hierbei der strafrechtliche Lebensschutz und das Selbstbestimmungsrecht des Einzelnen in einem Spannungsverh{\"a}ltnis. Die vorliegende Arbeit hat untersucht, wie sich dieses Spannungsverh{\"a}ltnis in der h{\"o}chstrichterlichen Judikatur entwickelt hat und wie es nunmehr gel{\"o}st wird. Konkret stellt sich hierbei die Frage, wie es strafrechtlich bewertet wurde, wenn jemand einen T{\"o}tungserfolg mitverursacht hat, der zugleich auf einem freiverantwortlichen Willensentschluss des Opfers beruhte.},
  language  = {de}
}
@article{OenerQuerebilloDavidetal.2018,
  author    = {{\"O}ner, Ibrahim Halil and Querebillo, Christine Joy and David, Christin and Gernert, Ulrich and Walter, Carsten and Driess, Matthias and Leimk{\"u}hler, Silke and Ly, Khoa Hoang and Weidinger, Inez M.},
  title     = {High electromagnetic field enhancement of TiO2 nanotube electrodes},
  series = {Angewandte Chemie : a journal of the Gesellschaft Deutscher Chemiker ; International edition},
  volume    = {57},
  journal   = {Angewandte Chemie : a journal of the Gesellschaft Deutscher Chemiker ; International edition},
  number    = {24},
  publisher = {Wiley-VCH},
  address   = {Weinheim},
  issn      = {1433-7851},
  doi       = {10.1002/anie.201802597},
  pages     = {7225 -- 7229},
  year      = {2018},
  abstract  = {We present the fabrication of TiO2 nanotube electrodes with high biocompatibility and extraordinary spectroscopic properties. Intense surface-enhanced resonance Raman signals of the heme unit of the redox enzyme Cytochromeb(5) were observed upon covalent immobilization of the protein matrix on the TiO2 surface, revealing overall preserved structural integrity and redox behavior. The enhancement factor could be rationally controlled by varying the electrode annealing temperature, reaching a record maximum value of over 70 at 475 degrees C. For the first time, such high values are reported for non-directly surface-interacting probes, for which the involvement of charge-transfer processes in signal amplification can be excluded. The origin of the surface enhancement is exclusively attributed to enhanced localized electric fields resulting from the specific optical properties of the nanotubular geometry of the electrode.},
  language  = {en}
}
@article{OehbergSurkovTittonenetal.1997,
  author    = {{\"O}hberg, P. and Surkov, E. L. and Tittonen, I. and Stenholm, Stig and Wilkens, Martin and Shlyapnikov, G. V.},
  title     = {Low-energy elementary excitations of a trapped Bose-condensed gas},
  year      = {1997},
  abstract  = {We develop a method of finding analytical sotutions of the Bogolyubov-de Gennes equations for the excitations of a Bose condensate in the Thomas-Fermi regime in harmonic traps of any asymmetry and introduce a classification of eigenstates. In the case of cylindrical symmetry we emphasize the presence of an accidental degeneracy in the excitation spectrum at certain values of the projection of orbital angular momentum on the symmetry axis and discuss possible consequences of the degeneracy in the context of new signatures of Bose- Einstein condensation},
  language  = {en}
}
@phdthesis{Cakıl2017,
  author    = {{\c{C}}ak{\i}l, B{\"u}{\c{s}}ra},
  title     = {Rehabilitierung des Ehrbegriffs},
  publisher = {Tectum},
  address   = {Baden-Baden},
  isbn      = {978-3-8288-4133-8},
  school      = {Universit{\"a}t Potsdam},
  pages     = {X, 210},
  year      = {2017},
  abstract  = {Heutzutage ist es {\"u}blich, die Ehre als einen obsoleten Begriff zu betrachten, der nur einem archaischen Denkmodell zuzuordnen ist und keine handlungspr{\"a}gende Gr{\"o}ße in der Gegenwartsgesellschaft darstellt. Die Ehrenmorde, die heute noch in unterschiedlichen Teilen der Welt ver{\"u}bt werden, scheinen diese Behauptung zu best{\"a}tigen. In diesem Buch wird jedoch die These vertreten, dass nicht der Ehrbegriff, sondern seine Deutungen archaischer Natur und daher in Frage zu stellen sind. Die Ehre ist die Bezeichnung des sozialen Werts eines Menschen, den er infolge seiner achtenswerten Handlungen erlangt. Also kann sie kein Motiv f{\"u}r moralisch fragw{\"u}rdige Praktiken bilden. Vor diesem Hintergrund werden die Formen und die Voraussetzungen der Ehre dargestellt, die sowohl in Bezug auf unsere Zeit anpassungsf{\"a}hig als auch ethisch tragbar sind.},
  language  = {de}
}
@article{CabukUenlue2022,
  author    = {{\c{C}}abuk, Uğur and {\"U}nl{\"u}, Ercan Sel{\c{c}}uk},
  title     = {A combined de novo assembly approach increases the quality of prokaryotic draft genomes},
  series = {Folia microbiologica : international journal for general, environmental and applied microbiology, and immunology},
  volume    = {67},
  journal   = {Folia microbiologica : international journal for general, environmental and applied microbiology, and immunology},
  publisher = {Springer},
  address   = {Dordrecht},
  issn      = {0015-5632},
  doi       = {10.1007/s12223-022-00980-7},
  pages     = {801 -- 810},
  year      = {2022},
  abstract  = {Next-generation sequencing methods provide comprehensive data for the analysis of structural and functional analysis of the genome. The draft genomes with low contig number and high N50 value can give insight into the structure of the genome as well as provide information on the annotation of the genome. In this study, we designed a pipeline that can be used to assemble prokaryotic draft genomes with low number of contigs and high N50 value. We aimed to use combination of two de novo assembly tools (SPAdes and IDBA-Hybrid) and evaluate the impact of this approach on the quality metrics of the assemblies. The followed pipeline was tested with the raw sequence data with short reads (< 300) for a total of 10 species from four different genera. To obtain the final draft genomes, we firstly assembled the sequences using SPAdes to find closely related organism using the extracted 16 s rRNA from it. IDBA-Hybrid assembler was used to obtain the second assembly data using the closely related organism genome. SPAdes assembler tool was implemented using the second assembly, produced by IDBA-hybrid as a hint. The results were evaluated using QUAST and BUSCO. The pipeline was successful for the reduction of the contig numbers and increasing the N50 statistical values in the draft genome assemblies while preserving the coverage of the draft genomes.},
  language  = {en}
}
@book{Aslund1997,
  author    = {{\AA}slund, Anders},
  title     = {The political economy of systemic transformation and institution-building},
  series = {Diskussionsbeitrag / Europ{\"a}isches Institut f{\"u}r internationale Wirtschaftsbeziehungen, Potsdam},
  volume    = {40},
  journal   = {Diskussionsbeitrag / Europ{\"a}isches Institut f{\"u}r internationale Wirtschaftsbeziehungen, Potsdam},
  publisher = {Univ.},
  address   = {Potsdam},
  issn      = {1430-5445},
  pages     = {22 S.},
  year      = {1997},
  language  = {en}
}
@book{AgelBoykenEisenbergetal.2023,
  author    = {{\´A}gel, Vilmos and Boyken, Thomas and Eisenberg, Peter and Fuhrhop, Nanna and Peters, Kendra and Schreiber, Niklas and Yildirim, Derya and Bon, Laura and Engelberg, Stefan and Rapp, Irene and Gr{\"u}ttemeier, Ralf and Musan, Renate and Schneider, Stefan},
  title     = {Literarische Grammatik},
  series = {Germanistische Bibliothek},
  journal   = {Germanistische Bibliothek},
  number    = {78},
  editor    = {Fuhrhop, Nanna and Reinken, Niklas and Schreiber, Niklas},
  publisher = {Universit{\"a}tsverlag Winter},
  address   = {Heidelberg},
  isbn      = {978-3-8253-8608-5},
  doi       = {10.33675/2023-82538608},
  pages     = {201},
  year      = {2023},
  abstract  = {Dieser Band versammelt neun Beitr{\"a}ge mit dem Ziel, Sprach- und Literaturwissenschaft aufeinander zu beziehen: Literatur grammatisch zu betrachten und Grammatik f{\"u}r Literatur (neu) zu denken. Jeder Beitrag nimmt mindestens einen grammatischen und einen literarischen Gegenstand zum Ausgangspunkt. Dabei ist die Bandbreite groß; sie reicht von Bodo Kirchhoffs Roman ‚D{\"a}mmer und Aufruhr' {\"u}ber die Kurzgeschichte ‚Das Brot' von Wolfgang Borchert bis hin zu Marion Poschmanns Gedichtzyklus ‚Kindergarten Lichtenberg' und deckt unterschiedlichste sprachliche Bereiche wie Tempus, semantische Rollen, Interpunktionszeichen oder Metaphern ab. Ist es in der Schule geradezu erw{\"u}nscht, Grammatik und Literatur integrativ zu unterrichten, verfolgen sie als universit{\"a}re Disziplinen oft ganz unterschiedliche Fragestellungen an verschiedenen Sprachwerken. Vor diesem Hintergrund ist dieser Band ein interdisziplin{\"a}rer Versuch, Anregungen und neue Perspektiven f{\"u}r schulische wie universit{\"a}re Bildungskontexte zu geben.},
  language  = {de}
}
@article{CwiekKupczynskaAltmannArendetal.2016,
  author    = {´Cwiek-Kupczynska, Hanna and Altmann, Thomas and Arend, Daniel and Arnaud, Elizabeth and Chen, Dijun and Cornut, Guillaume and Fiorani, Fabio and Frohmberg, Wojciech and Junker, Astrid and Klukas, Christian and Lange, Matthias and Mazurek, Cezary and Nafissi, Anahita and Neveu, Pascal and van Oeveren, Jan and Pommier, Cyril and Poorter, Hendrik and Rocca-Serra, Philippe and Sansone, Susanna-Assunta and Scholz, Uwe and van Schriek, Marco and Seren, {\"U}mit and Usadel, Bjorn and Weise, Stephan and Kersey, Paul and Krajewski, Pawel},
  title     = {Measures for interoperability of phenotypic data: minimum information requirements and formatting},
  series = {Plant Methods},
  volume    = {12},
  journal   = {Plant Methods},
  publisher = {BioMed Central},
  address   = {London},
  issn      = {1746-4811},
  doi       = {10.1186/s13007-016-0144-4},
  pages     = {18},
  year      = {2016},
  abstract  = {Background: Plant phenotypic data shrouds a wealth of information which, when accurately analysed and linked to other data types, brings to light the knowledge about the mechanisms of life. As phenotyping is a field of research comprising manifold, diverse and time-consuming experiments, the findings can be fostered by reusing and combining existing datasets. Their correct interpretation, and thus replicability, comparability and interoperability, is possible provided that the collected observations are equipped with an adequate set of metadata. So far there have been no common standards governing phenotypic data description, which hampered data exchange and reuse. Results: In this paper we propose the guidelines for proper handling of the information about plant phenotyping experiments, in terms of both the recommended content of the description and its formatting. We provide a document called "Minimum Information About a Plant Phenotyping Experiment", which specifies what information about each experiment should be given, and a Phenotyping Configuration for the ISA-Tab format, which allows to practically organise this information within a dataset. We provide examples of ISA-Tab-formatted phenotypic data, and a general description of a few systems where the recommendations have been implemented. Conclusions: Acceptance of the rules described in this paper by the plant phenotyping community will help to achieve findable, accessible, interoperable and reusable data.},
  language  = {en}
}