@article{Faber2011,
  author    = {Faber, Eike},
  title     = {Anti-Germanism in Constantinople or the Revolt of Gainas?},
  series = {New perspectives on late antiquity},
  journal   = {New perspectives on late antiquity},
  publisher = {Cambridge Scholars},
  address   = {Newcastle upon Tyne},
  isbn      = {978-1-4438-2718-8},
  pages     = {124 -- 135},
  year      = {2011},
  language  = {en}
}
@misc{EggertRawelPawelzik2011,
  author    = {Eggert, Kai and Rawel, Harshadrai Manilal and Pawelzik, Elke},
  title     = {In vitro degradation of wheat gluten fractions by Fusarium graminearum proteases},
  series = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe},
  journal   = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe},
  number    = {877},
  issn      = {1866-8372},
  doi       = {10.25932/publishup-43510},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-435102},
  pages     = {697 -- 705},
  year      = {2011},
  abstract  = {Fusarium spp. infection of cereal grain is a common problem, which leads to a dramatic loss of grain quality. The aim of the present study was to investigate the effect of Fusarium infection on the wheat storage protein gluten and its fractions, the gliadins and glutenins, in an in vitro model system. Gluten proteins were digested by F. graminearum proteases for 2, 4, 8 and 24 h, separated by Osborne fractionation and characterised by chromatographic (RP-HPLC) and electrophoretic analysis (SDS-Page). Gluten digestion by F. graminearum proteases showed in comparison with gliadins a preference for the glutenins whereas the HMW subfraction was at most affected. In comparison with a untreated control, the HMW subfraction was degraded of about 97\% after 4 h incubation with Fusarium proteases. Separate digestion of gliadin and glutenin underlined the preference for HMW-GS. Analogue to the observed change in the gluten composition, the yield of the proteins extracted changed. A higher amount of glutenin fragments was found in the gliadin extraction solution after digestion and could mask a gliadin destruction at the same time. This observation can contribute to explain the frequently reported reduced glutenin amount parallel to an increase in gliadin quantity after Fusarium infection in grains.},
  language  = {en}
}
@misc{BierbachSchulteHerrmannetal.2011,
  author    = {Bierbach, David and Schulte, Matthias and Herrmann, Nina and Tobler, Michael and Stadler, Stefan and Jung, Christian T. and Kunkel, Benjamin and Riesch, R{\"u}diger and Klaus, Sebastian and Ziege, Madlen and Indy, Jeane Rimber and Arias-Rodriguez, Lenin and Plath, Martin},
  title     = {Predator-induced changes of female mating preferences},
  series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe},
  journal   = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe},
  number    = {984},
  issn      = {1866-8372},
  doi       = {10.25932/publishup-43109},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-431099},
  pages     = {12},
  year      = {2011},
  abstract  = {Background In many species males face a higher predation risk than females because males display elaborate traits that evolved under sexual selection, which may attract not only females but also predators. Females are, therefore, predicted to avoid such conspicuous males under predation risk. The present study was designed to investigate predator-induced changes of female mating preferences in Atlantic mollies (Poecilia mexicana). Males of this species show a pronounced polymorphism in body size and coloration, and females prefer large, colorful males in the absence of predators. Results In dichotomous choice tests predator-na{\"i}ve (lab-reared) females altered their initial preference for larger males in the presence of the cichlid Cichlasoma salvini, a natural predator of P. mexicana, and preferred small males instead. This effect was considerably weaker when females were confronted visually with the non-piscivorous cichlid Vieja bifasciata or the introduced non-piscivorous Nile tilapia (Oreochromis niloticus). In contrast, predator experienced (wild-caught) females did not respond to the same extent to the presence of a predator, most likely due to a learned ability to evaluate their predators' motivation to prey. Conclusions Our study highlights that (a) predatory fish can have a profound influence on the expression of mating preferences of their prey (thus potentially affecting the strength of sexual selection), and females may alter their mate choice behavior strategically to reduce their own exposure to predators. (b) Prey species can evolve visual predator recognition mechanisms and alter their mate choice only when a natural predator is present. (c) Finally, experiential effects can play an important role, and prey species may learn to evaluate the motivational state of their predators.},
  language  = {en}
}
@misc{VanDonkIanoraVos2011,
  author    = {Van Donk, Ellen and Ianora, Adrianna and Vos, Matthijs},
  title     = {Induced defences in marine and freshwater phytoplankton},
  series = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe},
  journal   = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe},
  number    = {881},
  issn      = {1866-8372},
  doi       = {10.25932/publishup-43513},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-435130},
  pages     = {19},
  year      = {2011},
  abstract  = {Many organisms have developed defences to avoid predation by species at higher trophic levels. The capability of primary producers to defend themselves against herbivores affects their own survival, can modulate the strength of trophic cascades and changes rates of competitive exclusion in aquatic communities. Algal species are highly flexible in their morphology, growth form, biochemical composition and production of toxic and deterrent compounds. Several of these variable traits in phytoplankton have been interpreted as defence mechanisms against grazing. Zooplankton feed with differing success on various phytoplankton species, depending primarily on size, shape, cell wall structure and the production of toxins and deterrents. Chemical cues associated with (i) mechanical damage, (ii) herbivore presence and (iii) grazing are the main factors triggering induced defences in both marine and freshwater phytoplankton, but most studies have failed to disentangle the exact mechanism(s) governing defence induction in any particular species. Induced defences in phytoplankton include changes in morphology (e.g. the formation of spines, colonies and thicker cell walls), biochemistry (such as production of toxins, repellents) and in life history characteristics (formation of cysts, reduced recruitment rate). Our categorization of inducible defences in terms of the responsible induction mechanism provides guidance for future work, as hardly any of the available studies on marine or freshwater plankton have performed all the treatments that are required to pinpoint the actual cue(s) for induction. We discuss the ecology of inducible defences in marine and freshwater phytoplankton with a special focus on the mechanisms of induction, the types of defences, their costs and benefits, and their consequences at the community level.},
  language  = {en}
}
@article{AbdoAckermannAjelloetal.2011,
  author    = {Abdo, A. A. and Ackermann, Margit and Ajello, M. and Allafort, A. J. and Baldini, L. and Ballet, J. and Barbiellini, G. and Baring, M. G. and Bastieri, D. and Bechtol, K. C. and Bellazzini, R. and Berenji, B. and Blandford, R. D. and Bloom, E. D. and Bonamente, E. and Borgland, A. W. and Bouvier, A. and Brandt, T. J. and Bregeon, Johan and Brez, A. and Brigida, M. and Bruel, P. and Buehler, R. and Buson, S. and Caliandro, G. A. and Cameron, R. A. and Cannon, A. and Caraveo, P. A. and Carrigan, Svenja and Casandjian, J. M. and Cavazzuti, E. and Cecchi, C. and Celik, O. and Charles, E. and Chekhtman, A. and Cheung, C. C. and Chiang, J. and Ciprini, S. and Claus, R. and Cohen-Tanugi, J. and Conrad, Jan and Cutini, S. and Dermer, C. D. and de Palma, F. and do Couto e Silva, E. and Drell, P. S. and Dubois, R. and Dumora, D. and Favuzzi, C. and Fegan, S. J. and Ferrara, E. C. and Focke, W. B. and Fortin, P. and Frailis, M. and Fuhrmann, L. and Fukazawa, Y. and Funk, S. and Fusco, P. and Gargano, F. and Gasparrini, D. and Gehrels, N. and Germani, S. and Giglietto, N. and Giordano, F. and Giroletti, M. and Glanzman, T. and Godfrey, G. and Grenier, I. A. and Guillemot, L. and Guiriec, S. and Hayashida, M. and Hays, E. and Horan, D. and Hughes, R. E. and Johannesson, G. and Johnson, A. S. and Johnson, W. N. and Kadler, M. and Kamae, T. and Katagiri, H. and Kataoka, J. and Knoedlseder, J. and Kuss, M. and Lande, J. and Latronico, L. and Lee, S. -H. and Lemoine-Goumard, M. and Longo, F. and Loparco, F. and Lott, B. and Lovellette, M. N. and Lubrano, P. and Madejski, G. M. and Makeev, A. and Max-Moerbeck, W. and Mazziotta, Mario Nicola and McEnery, J. E. and Mehault, J. and Michelson, P. F. and Mitthumsiri, W. and Mizuno, T. and Moiseev, A. A. and Monte, C. and Monzani, M. E. and Morselli, A. and Moskalenko, I. V. and Murgia, S. and Naumann-Godo, M. and Nishino, S. and Nolan, P. L. and Norris, J. P. and Nuss, E. and Ohsugi, T. and Okumura, A. and Omodei, N. and Orlando, E. and Ormes, J. F. and Paneque, D. and Panetta, J. H. and Parent, D. and Pavlidou, V. and Pearson, T. J. and Pelassa, V. and Pepe, M. and Pesce-Rollins, M. and Piron, F. and Porter, T. A. and Raino, S. and Rando, R. and Razzano, M. and Readhead, A. and Reimer, A. and Reimer, O. and Richards, J. L. and Ripken, J. and Ritz, S. and Roth, M. and Sadrozinski, H. F. -W. and Sanchez, D. and Sander, A. and Scargle, J. D. and Sgro, C. and Siskind, E. J. and Smith, P. D. and Spandre, G. and Spinelli, P. and Stawarz, L. and Stevenson, M. and Strickman, M. S. and Sokolovsky, K. V. and Suson, D. J. and Takahashi, H. and Takahashi, T. and Tanaka, T. and Thayer, J. B. and Thayer, J. G. and Thompson, D. J. and Tibaldo, L. and Torres, F. and Tosti, G. and Tramacere, A. and Uchiyama, Y. and Usher, T. L. and Vandenbroucke, J. and Vasileiou, V. and Vilchez, N. and Vitale, V. and Waite, A. P. and Wang, P. and Wehrle, A. E. and Winer, B. L. and Wood, K. S. and Yang, Z. and Ylinen, T. and Zensus, J. A. and Ziegler, M. and Aleksic, J. and Antonelli, L. A. and Antoranz, P. and Backes, Michael and Barrio, J. A. and Gonzalez, J. Becerra and Bednarek, W. and Berdyugin, A. and Berger, K. and Bernardini, E. and Biland, A. and Blanch Bigas, O. and Bock, R. K. and Boller, A. and Bonnoli, G. and Bordas, Pol and Tridon, D. Borla and Bosch-Ramon, Valentin and Bose, D. and Braun, I. and Bretz, T. and Camara, M. and Carmona, E. and Carosi, A. and Colin, P. and Colombo, E. and Contreras, J. L. and Cortina, J. and Covino, S. and Dazzi, F. and de Angelis, A. and del Pozo, E. De Cea and De Lotto, B. and De Maria, M. and De Sabata, F. and Mendez, C. Delgado and Ortega, A. Diago and Doert, M. and Dominguez, A. and Prester, Dijana Dominis and Dorner, D. and Doro, M. and Elsaesser, D. and Ferenc, D. and Fonseca, M. V. and Font, L. and Lopen, R. J. Garcia and Garczarczyk, M. and Gaug, M. and Giavitto, G. and Godinovi, N. and Hadasch, D. and Herrero, A. and Hildebrand, D. and Hoehne-Moench, D. and Hose, J. and Hrupec, D. and Jogler, T. and Klepser, S. and Kraehenbuehl, T. and Kranich, D. and Krause, J. and La Barbera, A. and Leonardo, E. and Lindfors, E. and Lombardi, S. and Lopez, M. and Lorenz, E. and Majumdar, P. and Makariev, E. and Maneva, G. and Mankuzhiyil, N. and Mannheim, K. and Maraschi, L. and Mariotti, M. and Martinez, M. and Mazin, D. and Meucci, M. and Miranda, J. M. and Mirzoyan, R. and Miyamoto, H. and Moldon, J. and Moralejo, A. and Nieto, D. and Nilsson, K. and Orito, R. and Oya, I. and Paoletti, R. and Paredes, J. M. and Partini, S. and Pasanen, M. and Pauss, F. and Pegna, R. G. and Perez-Torres, M. A. and Persic, M. and Peruzzo, J. and Pochon, J. and Moroni, P. G. Prada and Prada, F. and Prandini, E. and Puchades, N. and Puljak, I. and Reichardt, T. and Reinthal, R. and Rhode, W. and Ribo, M. and Rico, J. and Rissi, M. and Ruegamer, S. and Saggion, A. and Saito, K. and Saito, T. Y. and Salvati, M. and Sanchez-Conde, M. and Satalecka, K. and Scalzotto, V. and Scapin, V. and Schultz, C. and Schweizer, T. and Shayduk, M. and Shore, S. N. and Sierpowska-Bartosik, A. and Sillanpaa, A. and Sitarek, J. and Sobczynska, D. and Spanier, F. and Spiro, S. and Stamerra, A. and Steinke, B. and Storz, J. and Strah, N. and Struebig, J. C. and Suric, T. and Takalo, L. O. and Tavecchio, F. and Temnikov, P. and Terzic, T. and Tescaro, D. and Teshima, M. and Vankov, H. and Wagner, R. M. and Weitzel, Q. and Zabalza, V. and Zandanel, F. and Zanin, R. and Acciari, V. A. and Arlen, T. and Aune, T. and Benbow, W. and Boltuch, D. and Bradbury, S. M. and Buckley, J. 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W. and Mori, Y. and Nestoras, I. and Orlati, A. and Pagani, C. and Pace, C. and Pearson, R. and Perri, M. and Piner, B. G. and Pushkarev, A. B. and Ros, E. and Sadun, A. C. and Sakamoto, T. and Tornikoski, M. and Yatsu, Y. and Zook, A.},
  title     = {Insights into the high-energy gamma-Ray emission of markarian 501 fromextensive multifrequency observations in the fermi era},
  series = {The astrophysical journal : an international review of spectroscopy and astronomical physics},
  volume    = {727},
  journal   = {The astrophysical journal : an international review of spectroscopy and astronomical physics},
  number    = {2},
  publisher = {IOP Publ. Ltd.},
  address   = {Bristol},
  organization    = {Fermi-LAT Collaboration, MAGIC Collaboration, VERITAS Collaboration},
  issn      = {0004-637X},
  doi       = {10.1088/0004-637X/727/2/129},
  pages     = {26},
  year      = {2011},
  abstract  = {We report on the gamma-ray activity of the blazar Mrk 501 during the first 480 days of Fermi operation. We find that the average Large Area Telescope (LAT) gamma-ray spectrum of Mrk 501 can be well described by a single power-law function with a photon index of 1.78 +/- 0.03. While we observe relatively mild flux variations with the Fermi-LAT (within less than a factor of two), we detect remarkable spectral variability where the hardest observed spectral index within the LAT energy range is 1.52 +/- 0.14, and the softest one is 2.51 +/- 0.20. These unexpected spectral changes do not correlate with the measured flux variations above 0.3 GeV. In this paper, we also present the first results from the 4.5 month long multifrequency campaign (2009 March 15-August 1) on Mrk 501, which included the Very Long Baseline Array (VLBA), Swift, RXTE, MAGIC, and VERITAS, the F-GAMMA, GASP-WEBT, and other collaborations and instruments which provided excellent temporal and energy coverage of the source throughout the entire campaign. The extensive radio to TeV data set from this campaign provides us with the most detailed spectral energy distribution yet collected for this source during its relatively low activity. The average spectral energy distribution of Mrk 501 is well described by the standard one-zone synchrotron self-Compton (SSC) model. In the framework of this model, we find that the dominant emission region is characterized by a size less than or similar to 0.1 pc (comparable within a factor of few to the size of the partially resolved VLBA core at 15-43 GHz), and that the total jet power (similar or equal to 10(44) erg s(-1)) constitutes only a small fraction (similar to 10(-3)) of the Eddington luminosity. The energy distribution of the freshly accelerated radiating electrons required to fit the time-averaged data has a broken power-law form in the energy range 0.3 GeV-10 TeV, with spectral indices 2.2 and 2.7 below and above the break energy of 20 GeV. We argue that such a form is consistent with a scenario in which the bulk of the energy dissipation within the dominant emission zone of Mrk 501 is due to relativistic, proton-mediated shocks. We find that the ultrarelativistic electrons and mildly relativistic protons within the blazar zone, if comparable in number, are in approximate energy equipartition, with their energy dominating the jet magnetic field energy by about two orders of magnitude.},
  language  = {en}
}
@article{LueckRuehlmannKirchmann2011,
  author    = {L{\"u}ck, Erika and R{\"u}hlmann, J{\"o}rg and Kirchmann, Holger},
  title     = {Properties of soils from the Swedish long-term fertility experiments VI. Mapping soil electrical conductivity with different geophysical methods},
  series = {Acta agriculturae Scandinavica : Section B, Soil and plant science},
  volume    = {61},
  journal   = {Acta agriculturae Scandinavica : Section B, Soil and plant science},
  number    = {5},
  publisher = {Taylor \& Francis Group},
  address   = {Oslo},
  issn      = {0906-4710},
  doi       = {10.1080/09064710.2010.502124},
  pages     = {438 -- 447},
  year      = {2011},
  abstract  = {Swedish long-term soil fertility experiments were used to investigate the effect of texture and fertilization regime on soil electrical conductivity. In one geophysical approach, fields were mapped to characterize the horizontal variability in apparent electrical conductivity down to 1.5 m soil depth using an electromagnetic induction meter (EM38 device). The data obtained were geo-referenced by dGPS. The other approach consisted of measuring the vertical variability in electrical conductivity along transects using a multi-electrode apparatus for electrical resistivity tomography (GeoTom RES/IP device) down to 2 m depth. Geophysical field work was complemented by soil analyses. The results showed that despite 40 years of different fertilization regimes, treatments had no significant effects on the apparent electrical conductivity. Instead, the comparison of sites revealed high and low conductivity soils, with gradual differences explained by soil texture. A significant, linear relationship found between apparent electrical conductivity and soil clay content explained 80\% of the variability measured. In terms of soil depth, both low and high electrical conductivity values were measured. Abrupt changes in electrical conductivity within a field revealed the presence of 'deviating areas'. Higher values corresponded well with layers with a high clay content, while local inclusions of coarse-textured materials caused a high variability in conductivity in some fields. The geophysical methods tested provided useful information on the variability in soil texture at the experimental sites. The use of spatial EC variability as a co-variable in statistical analysis could be a complementary tool in the evaluation of experimental results.},
  language  = {en}
}
@phdthesis{Sperfeld2011,
  author    = {Sperfeld, Erik},
  title     = {Effects of temperature and co-limiting nutritional components on life history traits of Daphnia magna and its biochemical composition},
  address   = {Potsdam},
  pages     = {157 S.},
  year      = {2011},
  language  = {en}
}
@article{KonradSchmolkeO'BrienZack2011,
  author    = {Konrad-Schmolke, Matthias and O'Brien, Patrick J. and Zack, Thomas},
  title     = {Fluid Migration above a Subducted Slab-Constraints on Amount, Pathways and Major Element Mobility from Partially Overprinted Eclogite-facies Rocks (Sesia Zone, Western Alps)},
  series = {Journal of petrology},
  volume    = {52},
  journal   = {Journal of petrology},
  number    = {3},
  publisher = {Oxford Univ. Press},
  address   = {Oxford},
  issn      = {0022-3530},
  doi       = {10.1093/petrology/egq087},
  pages     = {457 -- 486},
  year      = {2011},
  abstract  = {The Western Alpine Sesia-Lanzo Zone (SLZ) is a sliver of eclogite-facies continental crust exhumed from mantle depths in the hanging wall of a subducted oceanic slab. Eclogite-facies felsic and basic rocks sampled across the internal SLZ show different degrees of retrograde metamorphic overprint associated with fluid influx. The weakly deformed samples preserve relict eclogite-facies mineral assemblages that show partial fluid-induced compositional re-equilibration along grain boundaries, brittle fractures and other fluid pathways. Multiple fluid influx stages are indicated by replacement of primary omphacite by phengite, albitic plagioclase and epidote as well as partial re-equilibration and/or overgrowths in phengite and sodic amphibole, producing characteristic step-like compositional zoning patterns. The observed textures, together with the map-scale distribution of the samples, suggest open-system, pervasive and reactive fluid flux across large rock volumes above the subducted slab. Thermodynamic modelling indicates a minimum amount of fluid of 0 center dot 1-0 center dot 5 wt \% interacting with the wall-rocks. Phase relations and reaction textures indicate mobility of K, Ca, Fe and Mg, whereas Al is relatively immobile in these medium-temperature-high-pressure fluids. Furthermore, the thermodynamic models show that recycling of previously fractionated material, such as in the cores of garnet porphyroblasts, largely controls the compositional re-equilibration of the exhumed rock body.},
  language  = {en}
}
@article{KonradSchmolkeZackO'Brienetal.2011,
  author    = {Konrad-Schmolke, Matthias and Zack, Thomas and O'Brien, Patrick J. and Barth, Matthias},
  title     = {Fluid migration above a subducted slab - Thermodynamic and trace element modelling of fluid-rock interaction in partially overprinted eclogite-facies rocks (Sesia Zone, Western Alps)},
  series = {Earth \& planetary science letters},
  volume    = {311},
  journal   = {Earth \& planetary science letters},
  number    = {3-4},
  publisher = {Elsevier},
  address   = {Amsterdam},
  issn      = {0012-821X},
  doi       = {10.1016/j.epsl.2011.09.025},
  pages     = {287 -- 298},
  year      = {2011},
  abstract  = {The amount and composition of subduction zone fluids and the effect of fluid-rock interaction at a slab-mantle interface have been constrained by thermodynamic and trace element modelling of partially overprinted blueschist-facies rocks from the Sesia Zone (Western Alps). Deformation-induced differences in fluid flux led to a partial preservation of pristine mineral cores in weakly deformed samples that were used to quantify Li, B, Stand Pb distribution during mineral growth, -breakdown and modification induced by fluid-rock interaction. Our results show that Li and 13 budgets are fluid-controlled, thus acting as tracers for fluid-rock interaction processes, whereas Stand Pb budgets are mainly controlled by the fluid-induced formation of epidote. Our calculations show that fluid-rock interaction caused significant Li and B depletion in the affected rocks due to leaching effects, which in turn can lead to a drastic enrichment of these elements in the percolating fluid. Depending on available fluid-mineral trace element distribution coefficients modelled fluid rock ratios were up to 0.06 in weakly deformed samples and at least 0.5 to 4 in shear zone mylonites. These amounts lead to time integrated fluid fluxes of up to 1.4-10(2) m(3) m(-2) in the weakly deformed rocks and 1-8-10(3) m(3) m(-2) in the mylonites. Combined thermodynamic and trace element models can be used to quantify metamorphic fluid fluxes and the associated element transfer in complex, reacting rock systems and help to better understand commonly observed fluid-induced trace element trends in rocks and minerals from different geodynamic environments.},
  language  = {en}
}
@article{SchmidtMezgerO'Brien2011,
  author    = {Schmidt, Alexander and Mezger, Klaus and O'Brien, Patrick J.},
  title     = {The time of eclogite formation in the ultrahigh pressure rocks of the Sulu terrane Constraints from Lu-Hf garnet geochronology},
  series = {Lithos : an international journal of mineralogy, petrology, and geochemistry},
  volume    = {125},
  journal   = {Lithos : an international journal of mineralogy, petrology, and geochemistry},
  number    = {1-2},
  publisher = {Elsevier},
  address   = {Amsterdam},
  issn      = {0024-4937},
  doi       = {10.1016/j.lithos.2011.04.004},
  pages     = {743 -- 756},
  year      = {2011},
  abstract  = {Eclogites from the main borehole of the Chinese Continental Scientific Drilling project yield highly precise Lu-Hf garnet-clinopyroxene ages of 216.9 +/- 1.2 Ma (four samples) and 220.5 +/- 2.7 Ma (one sample). The spatial distribution of the rare earth elements in garnet is consistent with the preservation of primary growth zoning, unmodified by diffusion, which supports the interpretation that the Lu-Hf ages date the time of formation of garnet, the major rock forming mineral in the eclogites. The preservation of primary REE-zoning, despite peak metamorphic temperatures around 800-850 degrees C. indicates that the Lu-Hf chronometer is perfectly suitable to date garnet-forming reactions in high grade rocks. The range of Lu-Hf ages for eclogites in the Dabie-Sulu UHP terrane point to episodic rather than continuous growth of garnets and thus punctuated metamorphism during the collision of the North China Block and the Yangtze Block. The U-Pb ages and Hf-isotope systematics of zircon grains from one eclogite sample imply a protracted geologic history of the eclogite precursors that started around 2 Ga and culminated in the UHP metamorphism around 220 Ma.},
  language  = {en}
}
@article{KotkovaO'BrienZiemann2011,
  author    = {Kotkova, Jana and O'Brien, Patrick J. and Ziemann, Martin Andreas},
  title     = {Diamond and coesite discovered in Saxony-type granulite solution to the Variscan garnet peridotite enigma},
  series = {Geology},
  volume    = {39},
  journal   = {Geology},
  number    = {7},
  publisher = {American Institute of Physics},
  address   = {Boulder},
  issn      = {0091-7613},
  doi       = {10.1130/G31971.1},
  pages     = {667 -- 670},
  year      = {2011},
  abstract  = {The pressures required for diamond and coesite formation far exceed conditions reached by even the deepest present-day orogenic crustal roots. Therefore the occurrence of metamorphosed continental crust containing these minerals requires processes other than crustal thickening to have operated in the past. Here we report the first in situ finding of diamond and coesite, characterized by micro-Raman spectroscopy, in high-pressure granulites otherwise indistinguishable from granulites found associated with garnet peridotite throughout the European Variscides. Our discovery confirms the provenance of Europe's first reliable diamond, the "Bohemian diamond," found in A.D. 1870, and also represents the first robust evidence for ultrahigh-pressure conditions in a major Variscan crustal rock type. A process of deep continental subduction is required to explain the metamorphic pressures and the granulite-garnet peridotite association, and thus tectonometamorphic models for these rocks involving a deep orogenic crustal root need to be significantly modified.},
  language  = {en}
}
@article{SammlerBleidornTiedemann2011,
  author    = {Sammler, Svenja and Bleidorn, Christoph and Tiedemann, Ralph},
  title     = {Full mitochondrial genome sequences of two endemic Philippine hornbill species (Aves: Bucerotidae) provide evidence for pervasive mitochondrial DNA recombination},
  series = {BMC genomics},
  volume    = {12},
  journal   = {BMC genomics},
  number    = {2},
  publisher = {BioMed Central},
  address   = {London},
  issn      = {1471-2164},
  doi       = {10.1186/1471-2164-12-35},
  pages     = {10},
  year      = {2011},
  abstract  = {Background: Although nowaday it is broadly accepted that mitochondrial DNA (mtDNA) may undergo recombination, the frequency of such recombination remains controversial. Its estimation is not straightforward, as recombination under homoplasmy (i.e., among identical mt genomes) is likely to be overlooked. In species with tandem duplications of large mtDNA fragments the detection of recombination can be facilitated, as it can lead to gene conversion among duplicates. Although the mechanisms for concerted evolution in mtDNA are not fully understood yet, recombination rates have been estimated from "one per speciation event" down to 850 years or even "during every replication cycle". Results: Here we present the first complete mt genome of the avian family Bucerotidae, i.e., that of two Philippine hornbills, Aceros waldeni and Penelopides panini. The mt genomes are characterized by a tandemly duplicated region encompassing part of cytochrome b, 3 tRNAs, NADH6, and the control region. The duplicated fragments are identical to each other except for a short section in domain I and for the length of repeat motifs in domain III of the control region. Due to the heteroplasmy with regard to the number of these repeat motifs, there is some size variation in both genomes; with around 21,657 bp (A. waldeni) and 22,737 bp (P. panini), they significantly exceed the hitherto longest known avian mt genomes, that of the albatrosses. We discovered concerted evolution between the duplicated fragments within individuals. The existence of differences between individuals in coding genes as well as in the control region, which are maintained between duplicates, indicates that recombination apparently occurs frequently, i. e., in every generation. Conclusions: The homogenised duplicates are interspersed by a short fragment which shows no sign of recombination. We hypothesize that this region corresponds to the so-called Replication Fork Barrier (RFB), which has been described from the chicken mitochondrial genome. As this RFB is supposed to halt replication, it offers a potential mechanistic explanation for frequent recombination in mitochondrial genomes.},
  language  = {en}
}
@misc{PokornySharmaGoyaletal.2011,
  author    = {Pokorny, Ina and Sharma, Reeta and Goyal, Surendra Prakash and Mishra, Sudanshu and Tiedemann, Ralph},
  title     = {MHC class I and MHC class II DRB gene variability in wild and captive Bengal tigers (Panthera tigris tigris) (vol 10, pg 667, 2010)},
  series = {Immunogenetics},
  volume    = {63},
  journal   = {Immunogenetics},
  number    = {2},
  publisher = {Springer},
  address   = {New York},
  issn      = {0093-7711},
  doi       = {10.1007/s00251-010-0496-2},
  pages     = {121 -- 121},
  year      = {2011},
  language  = {en}
}
@article{WiesnerLoxdaleKoehleretal.2011,
  author    = {Wiesner, Kerstin R. and Loxdale, Hugh D. and K{\"o}hler, G{\"u}nter and Schneider, Anja R. R. and Tiedemann, Ralph and Weisser, Wolfgang W.},
  title     = {Patterns of local and regional genetic structuring in the meadow grasshopper, Chorthippus parallelus (Orthoptera: Acrididae), in Central Germany revealed using microsatellite markers},
  series = {Biological journal of the Linnean Society : a journal of evolution},
  volume    = {103},
  journal   = {Biological journal of the Linnean Society : a journal of evolution},
  number    = {4},
  publisher = {Wiley-Blackwell},
  address   = {Malden},
  issn      = {0024-4066},
  doi       = {10.1111/j.1095-8312.2011.01698.x},
  pages     = {875 -- 890},
  year      = {2011},
  abstract  = {The meadow grasshopper, Chorthippus parallelus (Zetterstedt), is common and widespread in Central Europe, with a low dispersal range per generation. A population study in Central Germany (Frankenwald and Thuringer Schiefergebirge) showed strong interpopulation differences in abundance and individual fitness. We examined genetic variability using microsatellite markers within and between 22 populations in a short-to long-distance sampling (19 populations, Frankenwald, Schiefergebirge, as well as a southern transect), and in the Erzgebirge region (three populations), with the latter aiming to check for effects as a result of historical forest cover. Of the 671 C. parallelus captured, none was macropterous (functionally winged). All populations showed a high level of expected and observed heterozygosity (mean 0.80-0.90 and 0.60-0.75, respectively), whereas there was evidence of inbreeding (F(IS) values all positive). Allelic richness for all locus-population combinations was high (mean 9.3-11.2), whereas alleles per locus ranged from 15-62. At a local level, genic and genotypic differences were significant. Pairwise F(ST) values were in the range 0.00-0.04, indicating little interpopulation genetic differentiation. Similarly, the calculated gene flow was very high, based on the respective F(ST) (19.5) and using private alleles (7.7). A Neighbour-joining tree using Nei's D(A) and principal coordinate analysis separated two populations that were collected in the Erzgebirge region. Populations from this region may have escaped the effects of the historical forest cover. The visualization of the spatial arrangement of genotypes revealed one geographical barrier to gene flow in the short-distance sampling.},
  language  = {en}
}
@article{StoofLeichsenringJungingerOlakaetal.2011,
  author    = {Stoof-Leichsenring, Kathleen Rosemarie and Junginger, Annett and Olaka, Lydia A. and Tiedemann, Ralph and Trauth, Martin H.},
  title     = {Environmental variability in Lake Naivasha, Kenya, over the last two centuries},
  series = {Journal of paleolimnolog},
  volume    = {45},
  journal   = {Journal of paleolimnolog},
  number    = {3},
  publisher = {Springer},
  address   = {Dordrecht},
  issn      = {0921-2728},
  doi       = {10.1007/s10933-011-9502-4},
  pages     = {353 -- 367},
  year      = {2011},
  abstract  = {Lake Naivasha, Kenya, is one of a number of freshwater lakes in the East African Rift System. Since the beginning of the twentieth century, it has experienced greater anthropogenic influence as a result of increasingly intensive farming of coffee, tea, flowers, and other horticultural crops within its catchment. The water-level history of Lake Naivasha over the past 200 years was derived from a combination of instrumental records and sediment data. In this study, we analysed diatoms in a lake sediment core to infer past lacustrine conductivity and total phosphorus concentrations. We also measured total nitrogen and carbon concentrations in the sediments. Core chronology was established by (210)Pb dating and covered a similar to 186-year history of natural (climatic) and human-induced environmental changes. Three stratigraphic zones in the core were identified using diatom assemblages. There was a change from littoral/epiphytic diatoms such as Gomphonema gracile and Cymbella muelleri, which occurred during a prolonged dry period from ca. 1820 to 1896 AD, through a transition period, to the present planktonic Aulacoseira sp. that favors nutrient-rich waters. This marked change in the diatom assemblage was caused by climate change, and later a strong anthropogenic overprint on the lake system. Increases in sediment accumulation rates since 1928, from 0.01 to 0.08 g cm(-2) year(-1) correlate with an increase in diatom-inferred total phosphorus concentrations since the beginning of the twentieth century. The increase in phosphorus accumulation suggests increasing eutrophication of freshwater Lake Naivasha. This study identified two major periods in the lake's history: (1) the period from 1820 to 1950 AD, during which the lake was affected mainly by natural climate variations, and (2) the period since 1950, during which the effects of anthropogenic activity overprinted those of natural climate variation.},
  language  = {en}
}
@article{SchwarteTiedemann2011,
  author    = {Schwarte, Sandra and Tiedemann, Ralph},
  title     = {A Gene Duplication/Loss Event in the Ribulose-1,5-Bisphosphate-Carboxylase/Oxygenase (Rubisco) Small Subunit Gene Family among Accessions of Arabidopsis thaliana},
  series = {Molecular biology and evolution},
  volume    = {28},
  journal   = {Molecular biology and evolution},
  number    = {6},
  publisher = {Oxford Univ. Press},
  address   = {Oxford},
  issn      = {0737-4038},
  doi       = {10.1093/molbev/msr008},
  pages     = {1861 -- 1876},
  year      = {2011},
  abstract  = {Rubisco (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39), the most abundant protein in nature, catalyzes the assimilation of CO(2) (worldwide about 10(11) t each year) by carboxylation of ribulose-1,5-bisphosphate. It is a hexadecamer consisting of eight large and eight small subunits. Although the Rubisco large subunit (rbcL) is encoded by a single gene on the multicopy chloroplast genome, the Rubisco small subunits (rbcS) are encoded by a family of nuclear genes. In Arabidopsis thaliana, the rbcS gene family comprises four members, that is, rbcS-1a, rbcS-1b, rbcS-2b, and rbcS-3b. We sequenced all Rubisco genes in 26 worldwide distributed A. thaliana accessions. In three of these accessions, we detected a gene duplication/loss event, where rbcS-1b was lost and substituted by a duplicate of rbcS-2b (called rbcS-2b*). By screening 74 additional accessions using a specific polymerase chain reaction assay, we detected five additional accessions with this duplication/loss event. In summary, we found the gene duplication/loss in 8 of 100 A. thaliana accessions, namely, Bch, Bu, Bur, Cvi, Fei, Lm, Sha, and Sorbo. We sequenced an about 1-kb promoter region for all Rubisco genes as well. This analysis revealed that the gene duplication/loss event was associated with promoter alterations (two insertions of 450 and 850 bp, one deletion of 730 bp) in rbcS-2b and a promoter deletion (2.3 kb) in rbcS-2b* in all eight affected accessions. The substitution of rbcS-1b by a duplicate of rbcS-2b (i.e., rbcS-2b*) might be caused by gene conversion. All four Rubisco genes evolve under purifying selection, as expected for central genes of the highly conserved photosystem of green plants. We inferred a single positive selected site, a tyrosine to aspartic acid substitution at position 72 in rbcS-1b. Exactly the same substitution compromises carboxylase activity in the cyanobacterium Anacystis nidulans. In A. thaliana, this substitution is associated with an inferred recombination. Functional implications of the substitution remain to be evaluated.},
  language  = {en}
}
@article{TiedemannPaulusHavensteinetal.2011,
  author    = {Tiedemann, Ralph and Paulus, Kirsten B. and Havenstein, Katja and Thorstensen, Sverrir and Petersen, Aevar and Lyngs, Peter and Milinkovitch, Michel C.},
  title     = {Alien eggs in duck nests brood parasitism or a help from Grandma?},
  series = {Molecular ecology},
  volume    = {20},
  journal   = {Molecular ecology},
  number    = {15},
  publisher = {Wiley-Blackwell},
  address   = {Hoboken},
  issn      = {0962-1083},
  doi       = {10.1111/j.1365-294X.2011.05158.x},
  pages     = {3237 -- 3250},
  year      = {2011},
  abstract  = {Intraspecific brood parasitism (IBP) is a remarkable phenomenon by which parasitic females can increase their reproductive output by laying eggs in conspecific females' nests in addition to incubating eggs in their own nest. Kin selection could explain the tolerance, or even the selective advantage, of IBP, but different models of IBP based on game theory yield contradicting predictions. Our analyses of seven polymorphic autosomal microsatellites in two eider duck colonies indicate that relatedness between host and parasitizing females is significantly higher than the background relatedness within the colony. This result is unlikely to be a by-product of relatives nesting in close vicinity, as nest distance and genetic identity are not correlated. For eider females that had been ring-marked during the decades prior to our study, our analyses indicate that (i) the average age of parasitized females is higher than the age of nonparasitized females, (ii) the percentage of nests with alien eggs increases with the age of nesting females, (iii) the level of IBP increases with the host females' age, and (iv) the number of own eggs in the nest of parasitized females significantly decreases with age. IBP may allow those older females unable to produce as many eggs as they can incubate to gain indirect fitness without impairing their direct fitness: genetically related females specialize in their energy allocation, with young females producing more eggs than they can incubate and entrusting these to their older relatives. Intraspecific brood parasitism in ducks may constitute cooperation among generations of closely related females.},
  language  = {en}
}
@article{EppStoofLeichsenringTrauthetal.2011,
  author    = {Epp, Laura Saskia and Stoof-Leichsenring, Kathleen Rosemarie and Trauth, Martin H. and Tiedemann, Ralph},
  title     = {Molecular profiling of diatom assemblages in tropical lake sediments using taxon-specific PCR and Denaturing High-Performance Liquid Chromatography (PCR-DHPLC)},
  series = {Molecular ecology resources},
  volume    = {11},
  journal   = {Molecular ecology resources},
  number    = {5},
  publisher = {Wiley-Blackwell},
  address   = {Hoboken},
  issn      = {1755-098X},
  doi       = {10.1111/j.1755-0998.2011.03022.x},
  pages     = {842 -- 853},
  year      = {2011},
  abstract  = {Here we present a protocol to genetically detect diatoms in sediments of the Kenyan tropical Lake Naivasha, based on taxon-specific PCR amplification of short fragments (approximately 100 bp) of the small subunit ribosomal (SSU) gene and subsequent separation of species-specific PCR products by PCR-based denaturing high-performance liquid chromatography (DHPLC). An evaluation of amplicons differing in primer specificity to diatoms and length of the fragments amplified demonstrated that the number of different diatom sequence types detected after cloning of the PCR products critically depended on the specificity of the primers to diatoms and the length of the amplified fragments whereby shorter fragments yielded more species of diatoms. The DHPLC was able to discriminate between very short amplicons based on the sequence difference, even if the fragments were of identical length and if the amplicons differed only in a small number of nucleotides. Generally, the method identified the dominant sequence types from mixed amplifications. A comparison with microscopic analysis of the sediment samples revealed that the sequence types identified in the molecular assessment corresponded well with the most dominant species. In summary, the PCR-based DHPLC protocol offers a fast, reliable and cost-efficient possibility to study DNA from sediments and other environmental samples with unknown organismic content, even for very short DNA fragments.},
  language  = {en}
}
@article{PavesiDeMatthaeisTiedemannetal.2011,
  author    = {Pavesi, Laura and De Matthaeis, Elvira and Tiedemann, Ralph and Ketmaier, Valerio},
  title     = {Temporal population genetics and COI phylogeography of the sandhopper macarorchestia remyi (Amphipoda: Talitridae)},
  series = {Zoological studies},
  volume    = {50},
  journal   = {Zoological studies},
  number    = {2},
  publisher = {Institute of Zoology, Academia Sinica},
  address   = {Taipei},
  issn      = {1021-5506},
  pages     = {220 -- 229},
  year      = {2011},
  abstract  = {Laura Pavesi, Elvira De Matthaeis, Ralph Tiedemann, and Valerio Ketmaier (2011) Temporal population genetics and COI phylogeography of the sandhopper Macarorchestia remyi (Amphipoda: Talitridae). Zoological Studies 50(2): 220-229. In this study we assessed levels of genetic divergence and variability in 208 individuals of the supralittoral sandhopper Macarorchestia remyi, a species strictly associated with rotted wood stranded on sand beaches, by analyzing sequence polymorphisms in a fragment of the mitochondrial DNA (mtDNA) gene coding cytochrome oxidase subunit I (COI). The geographical distribution and ecology of the species are poorly known. The study includes 1 Tyrrhenian and 2 Adriatic populations sampled along the Italian peninsula plus a single individual found on Corfu Is. (Greece). The Tyrrhenian population was sampled monthly for 1 yr. Genetic data revealed a deep phylogeographic break between the Tyrrhenian and Adriatic populations with no shared haplotypes. The single individual collected on Corfu Is. carried the most common haplotype found in the Tyrrhenian population. A mismatch analysis could not reject the hypothesis of a sudden demographic expansion in almost all but 2 monthly samples. When compared to previous genetic data centered on a variety of Mediterranean talitrids, our results place M. remyi among those species with profound intraspecific divergence (sandhoppers) and dissimilar from beachfleas, which generally display little population genetic structuring.},
  language  = {en}
}
@unpublished{WalzAdrianGilbertetal.2011,
  author    = {Walz, Norbert and Adrian, Rita and Gilbert, John J. and Monaghan, Michael T. and Weithoff, Guntram and Zimmermann-Timm, Heike},
  title     = {Preface},
  series = {Hydrobiologia : acta hydrobiologica, hydrographica, limnologica et protistologica},
  volume    = {662},
  journal   = {Hydrobiologia : acta hydrobiologica, hydrographica, limnologica et protistologica},
  number    = {1},
  publisher = {Springer},
  address   = {Dordrecht},
  issn      = {0018-8158},
  doi       = {10.1007/s10750-010-0514-2},
  pages     = {1 -- 4},
  year      = {2011},
  language  = {en}
}