@article{RossmanithGrimmBlaumetal.2006, author = {Rossmanith, Eva and Grimm, Volker and Blaum, Niels and Jeltsch, Florian}, title = {Behavioural flexibility in the mating system buffers population extinction: lessons from the Lesser Spotted Woodpecker (Picoides minor)}, doi = {10.1111/j.1365-2656.2006.01074.x}, year = {2006}, abstract = {In most stochastic models addressing the persistence of small populations, environmental noise is included by imposing a synchronized effect of the environment on all individuals. However, buffer mechanisms are likely to exist that may counteract this synchronization to some degree. We have studied whether the flexibility in the mating system, which has been observed in some bird species, is a potential mechanism counteracting the synchronization of environmental fluctuations. Our study organism is the lesser spotted woodpecker Picoides minor (Linnaeus), a generally monogamous species. However, facultative polyandry, where one female mates with two males with separate nests, was observed in years with male-biased sex ratio. We constructed an individual-based model from data and observations of a population in Taunus, Germany. We tested the impact of three behavioural scenarios on population persistence: (1) strict monogamy; (2) polyandry without costs; and (3) polyandry assuming costs in terms of lower survival and reproductive success for secondary males. We assumed that polyandry occurs only in years with male-biased sex ratio and only for females with favourable breeding conditions. Even low rates of polyandry had a strong positive effect on population persistence. The increase of persistence with carrying capacity was slower in the monogamous scenario, indicating strong environmental noise. In the polyandrous scenarios, the increase of persistence was stronger, indicating a buffer mechanism. In the polyandrous scenarios, populations had a higher mean population size, a lower variation in number of individuals, and recovered faster after a population breakdown. Presuming a realistic polyandry rate and costs for polyandry, there was still a strong effect of polyandry on persistence. The results show that polyandry and in general flexibility in mating systems is a buffer mechanism that can significantly reduce the impact of environmental and demographic noise in small populations. Consequently, we suggest that even behaviour that seems to be exceptional should be considered explicitly when predicting the persistence of populations}, language = {en} } @article{BuscagliaSchulerLapidusetal.2003, author = {Buscaglia, Marco and Schuler, Benjamin and Lapidus, Lisa J. and Eaton, Wiliam A. and Hofrichter, James}, title = {Kinetics of intramolecular contact formation in a denatured protein}, issn = {0022-2836}, year = {2003}, abstract = {Quenching of the triplet state of tryptophan by cysteine has provided a new tool for measuring the rate of forming a specific intramolecular contact in disordered polypeptides. Here, we use this technique to investigate contact formation in the denatured state of CspTm, a small cold-shock protein from Thermotoga maritima, engineered to contain a single tryptophan residue (W29) and a single cysteine residue at the C terminus (C67). At all concentrations of denaturant, the decay rate of the W29 triplet of the unfolded protein is more than tenfold faster than the rate observed for the native protein (not, vert, similar104 s;1). Experiments on the unfolded protein without the added C- terminal cysteine residue show that this faster rate results entirely from contact quenching by C67. The quenching rate in the unfolded state by C67 increases at concentrations of denaturant that favor folding, indicating a compaction of the unfolded protein as observed previously in single-molecule Foerster resonance energy transfer (FRET) experiments.}, language = {en} } @article{MoodleyBrufordBleidornetal.2009, author = {Moodley, Yoshan and Bruford, Michael W. and Bleidorn, Christoph and Wronski, Torsten and Apio, Ann and Plath, Martin}, title = {Analysis of mitochondrial DNA data reveals non-monophyly in the bushbuck (Tragelaphus scriptus) complex}, issn = {1616-5047}, doi = {10.1016/j.mambio.2008.05.003}, year = {2009}, language = {en} } @article{NagelWarsinke2006, author = {Nagel, Birgit and Warsinke, Axel}, title = {Towards separation-free electrochemical affinity sensors by using antibodies, aptamers and molecularly imprinted polymers : a review}, doi = {10.1080/00032710600853903}, year = {2006}, language = {en} } @article{NitscheKurthDunkhorstetal.2007, author = {Nitsche, Andreas and Kurth, Andreas and Dunkhorst, Anna and P{\"a}nke, Oliver and Sielaff, Hendrik and Junge, Wolfgang and Muth, Doreen and Scheller, Frieder W. and St{\"o}cklein, Walter F. M. and Pauli, Georg and Kage, Andreas}, title = {One-step selection of vaccinia virus binding DNA-aptamers by MonoLEX}, doi = {10.1186/1472-6750-7-48}, year = {2007}, language = {en} } @article{FettkeChiaEckermannetal.2006, author = {Fettke, J{\"o}rg and Chia, Tansy and Eckermann, Nora and Smith, Alison M. and Steup, Martin}, title = {A transglucosidase necessary for starch degradation and maltose metabolism in leaves at night acts on cytosolic heteroglycans (SHG)}, issn = {0960-7412}, doi = {10.1111/j.1365-313X.2006.02732.x}, year = {2006}, abstract = {The recently characterized cytosolic transglucosidase DPE2 (EC 2.4.1.25) is essential for the cytosolic metabolism of maltose, an intermediate on the pathway by which starch is converted to sucrose at night. In in vitro assays, the enzyme utilizes glycogen as a glucosyl acceptor but the in vivo acceptor molecules remained unknown. In this communication we present evidence that DPE2 acts on the recently identified cytosolic water-soluble heteroglycans (SHG) as does the cytosolic phosphorylase (EC 2.4.1.1) isoform. By using in vitro two-step C-14 labeling assays we demonstrate that the two transferases can utilize the same acceptor sites of the SHG. Cytosolic heteroglycans from a DPE2-deficient Arabidopsis mutant were characterized. Compared with the wild type the glucose content of the heteroglycans was increased. Most of the additional glucosyl residues were found in the outer chains of SHG that are released by an endo- alpha-arabinanase (EC 3.2.1.99). Additional starch-related mutants were characterized for further analysis of the increased glucosyl content. Based on these data, the cytosolic metabolism of starch-derived carbohydrates is discussed}, language = {en} } @article{KappBeissenhirtzGeyeretal.2006, author = {Kapp, Andreas and Beissenhirtz, Moritz Karl and Geyer, F. and Scheller, Frieder W. and Viezzoli, Maria Silvia and Lisdat, Fred}, title = {Electrochemical and sensorial behaviour of SOD mutants immobilized on gold electrodes in aqueous / organic solvent mixtures}, issn = {1040-0397}, doi = {10.1002/elan.200603620}, year = {2006}, language = {en} } @article{Knoesche2006, author = {Kn{\"o}sche, R{\"u}diger}, title = {Organic sediment nutrient concentrations and their relationship with the hydrological connectivity of floodplain waters (River Havel, NE Germany)}, year = {2006}, abstract = {Investigations on large canalised rivers, for example the Danube, have shown that transported particulate matter, which is typically inorganic, is predominantly deposited in waters near the river's main channel. This investigation deals with the lower section of the River Havel (NE Germany), a canalised lowland river with a very flat floodplain. This river is highly polluted by nutrients from urban areas (Berlin) and a long chain of river lakes produces high concentrations of phytoplankton. Due to the high proportion of planktogenic detritus, it was hypothesised that greater quantities of nutrient-rich fine particulate organic matter (FPOM) would be deposited in floodplain waters located further from the main channel than has been reported for large rivers.The total nutrient, P-binding metal (Fe, Al, and Mn), organic and inorganic carbon (TOC, TIC) contents of the upper organic sediment layer (0 - 4 cm) were analysed in samples collected from 48 floodplain water and river sites. The sediment bulk density, calculated on the basis of dry mass content and loss on ignition, was used to characterize the waters according to the impact of the river current. The results showed that the variability of total phosphorus (TP) was best explained by the variability of total iron (TFe, R2 = 0.52). The floodplain water sediments could clearly be separated into two groups on the basis of the sediment particle size composition, and of the element ratios TOC:TP, TN:TP, primarily TFe:TP. The sediments from impounded river sections and from mouth sections of backwaters (approx. 100 - 200 m) were characterized by a high proportion particles from the 0.1 - 0.5 mm size fraction and by homogeneous, low TFe:TP, TOC:TP and TN:TP ratios. Sediments from distal sections of backwaters and of oxbow lakes tended to exhibit high element ratios with much higher variability. These results were interpreted as a spatially limited impact of the river on the floodplain water sediments. Contrary to expectation, the phosphorus bound in river seston was predominantly and very homogeneously deposited in the impounded river and mouth sections of backwaters. This implies that the inundation of the floodplain waters during spring floods seems to have no important material impact on the sediments in waters of low hydrologically connectivity with the River Havel.}, language = {en} } @article{Micheel2006, author = {Micheel, Burkhard}, title = {Monoclonal Antibodies}, isbn = {978-3-540-44244-8}, year = {2006}, language = {en} } @article{Spijkerman2007, author = {Spijkerman, Elly}, title = {Is there really insufficient support for Tilman's R* concept? A comment on Miller et al}, year = {2007}, language = {en} } @article{Gaedke2007, author = {Gaedke, Ursula}, title = {Spectral analysis unmasks synchronous and compensatory dynamics in plankton communities}, year = {2007}, language = {en} } @article{BellParkPearceetal.2007, author = {Bell, Elanor M. and Park, Tae-Gyu and Pearce, Imojen and Rublee, Parke A. and Bolch, Christopher J. S. and Hallegraeff, Gustaff M.}, title = {Detection of a novel ecotype of Pfiesteria piscicida (Dinophyceae) in an Antarctic saline lake by real-time PCR}, year = {2007}, language = {en} } @article{HigginsFloresSchurr2008, author = {Higgins, Steven I. and Flores, Olivier and Schurr, Frank Martin}, title = {Costs of persistence and the spread of competing seeders and sprouters}, issn = {0022-0477}, doi = {10.1111/j.1365-2745.2008.01391.x}, year = {2008}, language = {en} } @article{Clegg2007, author = {Clegg, Mark R.}, title = {Behavioral response as a predictor of seasonal depth distribution and vertical niche separation in freshwater phytoplanktonic flagellates}, year = {2007}, language = {en} } @article{DreyerGajdanowicz2009, author = {Dreyer, Ingo and Gajdanowicz, Pawel}, title = {Regulation of the gating mode of the Arabidopsis K+ channel AKT2 is important for adaptation to abiotic stress}, issn = {1095-6433}, doi = {10.1016/j.cbpa.2009.04.426}, year = {2009}, language = {en} } @article{Spijkerman2007, author = {Spijkerman, Elly}, title = {Phosphorus acquisition by Chlamydomonas acidophila under autotrophic and osmo-mixotrophic growth conditions}, year = {2007}, language = {en} } @article{ScherberEisenhauerWeisseretal.2010, author = {Scherber, Christoph and Eisenhauer, Nico and Weisser, Wolfgang W. and Schmid, Bernhard and Voigt, Winfried and Fischer, Markus and Schukze, Ernst-Detlef and Roscher, Christiane and Weigelt, Alexandra and Allan, Eric and Beßler, Holger and Bonkowski, Michael and Buchmann, Nina and Buscot, Fran{\c{c}}ois and Clement, Lars W. and Ebeling, Anne and Engels, Christof and Halle, Stefan and Kertscher, Ilona and Klein, Alexandra-Maria and Koller, Robert and K{\"o}nig, Stephan and Kowalski, Esther and Kummer, Volker and Kuu, Annely and Lange, Markus and Lauterbach, Dirk}, title = {Bottom-up effects of plant diversity on multitrophic interactions in a biodiversity experiment}, issn = {0028-0836}, year = {2010}, language = {en} } @article{SchiffersSchurrTielboergeretal.2008, author = {Schiffers, Katja and Schurr, Frank Martin and Tielb{\"o}rger, Katja and Urbach, Carsten and Moloney, Kirk A. and Jeltsch, Florian}, title = {Dealing with virtual aggregation : a new index for analysing heterogeneous point patterns}, issn = {0906-7590}, doi = {10.1111/j.0906-7590.2008.05374.x}, year = {2008}, language = {en} } @article{LoksteinHoextermannLeupoldetal.2009, author = {Lokstein, Heiko and Hoextermann, Ekkehard and Leupold, Dieter and Garab, Gyoezoe and Renger, Gernot}, title = {A tribute : Professor Dr. Paul Hoffmann (March 28, 1931-July 10, 2008), a scientist with a great collaborative spirit}, issn = {0166-8595}, doi = {10.1007/s11120-009-9414-6}, year = {2009}, language = {en} } @article{SellrieSchenkBehrsingetal.2007, author = {Sellrie, Frank and Schenk, J{\"o}rg A. and Behrsing, Olaf and Drechsel, Oliver and Micheel, Burkhard}, title = {Cloning and characterization of a single chain antibody to glucose oxidase from a murine hybridoma}, year = {2007}, abstract = {Glucose oxidase (GOD) is an oxidoreductase catalyzing the reaction of glucose and oxygen to peroxide and gluconolacton (EC 1.1.3.4.). GOD is a widely used enzyme in biotechnology. Therefore the production of monoclonal antibodies and antibody fragments to GOD are of interest in bioanalytics and even tumor therapy. We describe here the generation of a panel of monoclonal antibodies to native and heat inactivated GOD. One of the hybridomas, E13BC8, was used for cloning of a single chain antibody (scFv). This scFv was expressed in Escherichia coli XL1-blue with the help of the vector system pOPE101. The scFv was isolated from the periplasmic fraction and detected by western blotting. It reacts specifically with soluble active GOD but does not recognize denatured GOD adsorbed to the solid phase. The same binding properties were also found for the monoclonal antibody E13BC8.}, language = {en} }