@article{AbdissaInduliAkalaetal.2013, author = {Abdissa, Negera and Induli, Martha and Akala, Hoseah M. and Heydenreich, Matthias and Midiwo, Jacob O. and Ndakala, Albert and Yenesew, Abiy}, title = {Knipholone cyclooxanthrone and an anthraquinone dimer with antiplasmodial activities from the roots of Kniphofia foliosa}, series = {Phytochemistry letters}, volume = {6}, journal = {Phytochemistry letters}, number = {2}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1874-3900}, doi = {10.1016/j.phytol.2013.02.005}, pages = {241 -- 245}, year = {2013}, abstract = {A new phenylanthrone, named knipholone cyclooxanthrone and a dimeric anthraquinone, 10-methoxy-10,7'-(chrysophanol anthrone)-chrysophanol were isolated from the roots of Kniphofia foliosa together with the rare naphthalene glycoside, dianellin. The structures were determined by NMR and mass spectroscopic techniques. The compounds showed antiplasmodial activities against the chloroquine-resistant (W2) and chloroquine-sensitive (D6) strains of Plasmodium falciparum with 10-methoxy-10,7'-(chrysophanol anthrone)-chrysophanol being the most active with IC50 values of 1.17 +/- 0.12 and 4.07 +/- 1.54 mu g/ml, respectively.}, language = {en} } @article{AdelsbergerGrilloKulkarnietal.2013, author = {Adelsberger, Joseph and Grillo, Isabelle and Kulkarni, Amit and Sharp, Melissa and Bivigou Koumba, Achille Mayelle and Laschewsky, Andr{\´e} and M{\"u}ller-Buschbaum, Peter and Papadakis, Christine M.}, title = {Kinetics of aggregation in micellar solutions of thermoresponsive triblock copolymers - influence of concentration, start and target temperatures}, series = {Soft matter}, volume = {9}, journal = {Soft matter}, number = {5}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1744-683X}, doi = {10.1039/c2sm27152d}, pages = {1685 -- 1699}, year = {2013}, abstract = {In aqueous solution, symmetric triblock copolymers with a thermoresponsive middle block and hydrophobic end blocks form flower-like core-shell micelles which collapse and aggregate upon heating through the cloud point (CP). The collapse of the micellar shell and the intermicellar aggregation are followed in situ and in real-time using time-resolved small-angle neutron scattering (SANS), while heating micellar solutions of a poly((styrene-d(8))-b-(N-isopropyl acrylamide)-b-(styrene-d(8))) triblock copolymer in D2O rapidly through their CP. The influence of polymer concentration as well as of the start and target temperatures is addressed. In all cases, the micellar collapse is very fast. The collapsed micelles immediately form small clusters which contain voids. They densify which slows down or even stops their growth. For low concentrations and target temperatures just above the CP, i.e. shallow temperature jumps, the subsequent growth of the clusters is described by diffusion-limited aggregation. In contrast, for higher concentrations and/or higher target temperatures, i.e. deep temperature jumps, intermicellar bridges dominate the growth. Eventually, in all cases, the clusters coagulate which results in macroscopic phase separation. For shallow temperature jumps, the cluster surfaces stay rough; whereas for deep temperature jumps, a concentration gradient develops at late stages. These results are important for the development of conditions for thermal switching in applications, e.g. for the use of thermoresponsive micellar systems for transport and delivery purposes.}, language = {en} } @article{AliHomannKhaliletal.2013, author = {Ali, Mostafa and Homann, Thomas and Khalil, Mahmoud and Kruse, Hans-Peter and Rawel, Harshadrai Manilal}, title = {Milk whey protein modification by coffee-specific phenolics effect on structural and functional properties}, series = {Journal of agricultural and food chemistry : a publication of the American Chemical Society}, volume = {61}, journal = {Journal of agricultural and food chemistry : a publication of the American Chemical Society}, number = {28}, publisher = {American Chemical Society}, address = {Washington}, issn = {0021-8561}, doi = {10.1021/jf402221m}, pages = {6911 -- 6920}, year = {2013}, abstract = {A suitable vehicle for integration of bioactive plant constituents is proposed. It involves modification of proteins using phenolics and applying these for protection of labile constituents. It dissects the noncovalent and covalent interactions of beta-lactoglobulin with coffee-specific phenolics. Alkaline and polyphenol oxidase modulated covalent reactions were compared. Tryptic digestion combined with MALDI-TOF-MS provided tentative allocation of the modification type and site in the protein, and an in silico modeling of modified beta-lactoglobulin is proposed. The modification delivers proteins with enhanced antioxidative properties. Changed structural properties and differences in solubility, surface hydrophobicity, and emulsification were observed. The polyphenol oxidase modulated reaction provides a modified beta-lactoglobulin with a high antioxidative power, is thermally more stable, requires less energy to unfold, and, when emulsified with lutein esters, exhibits their higher stability against UV light. Thus, adaptation of this modification provides an innovative approach for functionalizing proteins and their uses in the food industry.}, language = {en} } @phdthesis{Ast2013, author = {Ast, Cindy}, title = {Design and photophysical characterization of single fluorophore-based ammonium sensors}, address = {Potsdam}, pages = {90 S.}, year = {2013}, language = {en} } @misc{AstFischerMuelleretal.2013, author = {Ast, Sandra and Fischer, Tobias and M{\"u}ller, Holger and Mickler, Wulfhard and Schwichtenberg, Mathias and Rurack, Knut and Holdt, Hans-J{\"u}rgen}, title = {Integration of the 1,2,3-Triazole "Click" Motif as a potent signalling element in metal ion responsive fluorescent probes}, series = {Chemistry - a European journal}, volume = {19}, journal = {Chemistry - a European journal}, number = {9}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {0947-6539}, doi = {10.1002/chem.201201575}, pages = {2990 -- 3005}, year = {2013}, abstract = {In a systematic approach we synthesized a new series of fluorescent probes incorporating donoracceptor (D-A) substituted 1,2,3-triazoles as conjugative -linkers between the alkali metal ion receptor N-phenylaza-[18]crown-6 and different fluorophoric groups with different electron-acceptor properties (4-naphthalimide, meso-phenyl-BODIPY and 9-anthracene) and investigated their performance in organic and aqueous environments (physiological conditions). In the charge-transfer (CT) type probes 1, 2 and 7, the fluorescence is almost completely quenched by intramolecular CT (ICT) processes involving charge-separated states. In the presence of Na+ and K+ ICT is interrupted, which resulted in a lighting-up of the fluorescence in acetonitrile. Among the investigated fluoroionophores, compound 7, which contains a 9-anthracenyl moiety as the electron-accepting fluorophore, is the only probe which retains light-up features in water and works as a highly K+/Na+-selective probe under simulated physiological conditions. Virtually decoupled BODIPY-based 6 and photoinduced electron transfer (PET) type probes 35, where the 10-substituted anthracen-9-yl fluorophores are connected to the 1,2,3-triazole through a methylene spacer, show strong ion-induced fluorescence enhancement in acetonitrile, but not under physiological conditions. Electrochemical studies and theoretical calculations were used to assess and support the underlying mechanisms for the new ICT and PET 1,2,3-triazole fluoroionophores.}, language = {en} } @article{AstSchwarzeMuelleretal.2013, author = {Ast, Sandra and Schwarze, Thomas and M{\"u}ller, Holger and Sukhanov, Aleksey and Michaelis, Stefanie and Wegener, Joachim and Wolfbeis, Otto S. and K{\"o}rzd{\"o}rfer, Thomas and D{\"u}rkop, Axel and Holdt, Hans-J{\"u}rgen}, title = {A highly K+-Selective Phenylaza-[18]crown-6-Lariat-Ether-Based Fluoroionophore and its application in the sensing of K+ Ions with an optical sensor film and in cells}, series = {Chemistry - a European journal}, volume = {19}, journal = {Chemistry - a European journal}, number = {44}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {0947-6539}, doi = {10.1002/chem.201302350}, pages = {14911 -- 14917}, year = {2013}, abstract = {Herein, we report the synthesis of two phenylaza-[18]crown-6 lariat ethers with a coumarin fluorophore (1 and 2) and we reveal that compound 1 is an excellent probe for K+ ions under simulated physiological conditions. The presence of a 2-methoxyethoxy lariat group at the ortho position of the anilino moiety is crucial to the substantially increased stability of compounds 1 and 2 over their lariat-free phenylaza-[18] crown-6 ether analogues. Probe 1 shows a high K+/Na+ selectivity and a 2.5-fold fluorescence enhancement was observed in the presence of 100 mm K+ ions. A fluorescent membrane sensor, which was prepared by incorporating probe 1 into a hydrogel, showed a fully reversible response, a response time of 150 s, and a signal change of 7.8\% per 1 mm K+ within the range 1-10 mm K+. The membrane was easily fabricated (only a single sensing layer on a solid polyester support), yet no leaching was observed. Moreover, compound 1 rapidly permeated into cells, was cytocompatible, and was suitable for the fluorescent imaging of K+ ions on both the extracellular and intracellular levels.}, language = {en} } @article{AwasthiRitschelLipowskyetal.2013, author = {Awasthi, Neha and Ritschel, Thomas and Lipowsky, Reinhard and Knecht, Volker}, title = {Standard gibbs energies of formation and equilibrium constants from ab-initio calculations covalent dimerization of NO2 and synthesis of NH3}, series = {The journal of chemical thermodynamics}, volume = {62}, journal = {The journal of chemical thermodynamics}, number = {3}, publisher = {Elsevier}, address = {London}, issn = {0021-9614}, doi = {10.1016/j.jct.2013.03.011}, pages = {211 -- 221}, year = {2013}, abstract = {Standard quantum chemical methods are used for accurate calculation of thermochemical properties such as enthalpies of formation, entropies and Gibbs energies of formation. Equilibrium reactions are widely investigated and experimental measurements often lead to a range of reaction Gibbs energies and equilibrium constants. It is useful to calculate these equilibrium properties from quantum chemical methods in order to address the experimental differences. Furthermore, most standard calculation methods differ in accuracy and feasibility of the system size. Hence, asystematic comparison of equilibrium properties calculated with different numerical algorithms would provide a useful reference. We select two well-known gas phase equilibrium reactions with small molecules: covalent dimer formation of NO2 (2NO(2) reversible arrow N2O4) and the synthesis of NH3 (N-2 + 3 H-2 reversible arrow 2NH(3)). We test four quantum chemical methods denoted by G3B3, CBS-APNO, W1 and CCSD(T) with aug-cc-pVXZ basis sets (X = 2, 3, and 4), to obtain thermochemical data for NO2, N2O4, and NH3. The calculated standard formation Gibbs energies Delta(f)G degrees are used to calculate standard reaction Gibbs energies Delta(r)G degrees and standard equilibrium constants K-eq for the two reactions. Standard formation enthalpies Delta H-f degrees are calculated in a more reliable way using high-level methods such as W1 and CCSD(T). Standard entropies S degrees for the molecules are calculated well within the range of experiments for all methods, however, the values of standard formation Gibbs energies Delta(f)G degrees show some dependence on the choice of the method. High-level methods perform better for the calculation of molecular energies, however, simpler methods such as G3B3 and CBS-APNO perform quite well in the calculation of total reaction energies and equilibrium constants, provided that the chemical species involved do not exhibit molecular geometries that are difficult to handle by the applied method. The temperature dependence of standard reaction Gibbs energy Delta(r)G degrees for the NH3 reaction is discussed by using the calculated standard formation Gibbs energies Delta(f)G degrees of the reaction species at 298.15 K. The corresponding equilibrium constant K-eq as a function of temperature is found to be close to experimental values.}, language = {en} } @article{BagdahnTaubert2013, author = {Bagdahn, Christian and Taubert, Andreas}, title = {Ionogel fiber mats - functional materials via electrospinning of PMMA and the ionic liquid bis(1-butyl-3-methyl-imidazolium) Tetrachloridocuprate(II), [Bmim](2)[CuCl4]}, series = {Zeitschrift f{\"u}r Naturforschung : B, Chemical sciences}, volume = {68}, journal = {Zeitschrift f{\"u}r Naturforschung : B, Chemical sciences}, number = {10}, publisher = {De Gruyter}, address = {T{\"u}bingen}, issn = {0932-0776}, doi = {10.5560/ZNB.2013-3195}, pages = {1163 -- 1171}, year = {2013}, abstract = {Ionogel fiber mats were made by electrospinning poly(methylmethacrylate) (PMMA) and the ionic liquid (IL) bis(1-butyl-3-methyl-imidazolium) tetrachloridocupraten, [Bmim](2)[CuCl4], from acetone. The morphology of the electrospun ionogels strongly depends on the spinning parameters. Dense and uniform fiber mats were only obtained at concentrations of 60 to 70 g of polymer and IL mass combined. Lower concentrations led to a low number of poorly defined fibers. High voltages of 20 to 25 kV led to well-defined and uniform fibers; voltages between 15 and 20 kV again led to less uniform and less dense fibers. At 10 kV and lower, no spinning could be induced. Finally, PMMA fibers electrospun without IL show a less well-defined morphology combining fibers and oblong droplets indicating that the IL has a beneficial effect on the electrospinning process. The resulting materials are prototypes for new functional materials, for example in sterile filtration.}, language = {en} } @article{BaierKellingJackstelletal.2013, author = {Baier, Heiko and Kelling, Alexandra and Jackstell, Ralf and Holdt, Hans-J{\"u}rgen}, title = {Rhodium(I) and Silver(I) Complexes of 4,5-Dicyano-1,3-dimesityl- and 4,5-Dicyano-1,3-dineopentylimidazol-2-ylidene}, series = {Zeitschrift f{\"u}r anorganische und allgemeine Chemie}, volume = {639}, journal = {Zeitschrift f{\"u}r anorganische und allgemeine Chemie}, number = {10}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {0044-2313}, doi = {10.1002/zaac.201300250}, pages = {1731 -- 1739}, year = {2013}, abstract = {The new N-heterocyclic carbene (NHC) precursors 4,5-dicyano-1, -dimesityl- (9) and 4, 5-dicyano-1, 3-dineopentyl-2-(pentafluorophenyl)imidazoline (14) were synthesized. 9 could be determined by X-ray crystallography. With the 2-pentafluorophenyl-substituted imidazolines 9 and 14, the [AgCl(NHC)], [RhCl(COD)(NHC)], and [RhCl(CO)(2)(NHC)] complexes [NHC = 4, 5-dicyano-1, 3-dimesitylimidazol-2-ylidene (3) and 4, 5-dicyano-1, 3-dineopentylimidazol-2-ylidene (4)] were obtained. Crystal structures of [AgCl(3)] (15), [RhCl(COD)(3)] (17), [RhCl(COD)(4)] (18), and [RhCl(CO)(2)(3)] (19) were solved and with the crystal data of 19, the percent buried volume (\%V-bur) of 31.8(+/- 0.1)\% was determined for NHC 3. Infrared spectra of the imidazolines 9 and 14 and of the complexes 15-20 were recorded and the CO stretching frequencies of complexes 19 and 20 were used to determine the 3 ( (-1)) and 4 ( (-1)), thus proving that 1, 3-substitution of maleonitrile-NHCs does not have a significant effect for the high -acceptor strength of these carbenes.}, language = {en} } @article{BertzWoehlBruhnMietheetal.2013, author = {Bertz, Andreas and W{\"o}hl-Bruhn, Stefanie and Miethe, Sebastian and Tiersch, Brigitte and Koetz, Joachim and Hust, Michael and Bunjes, Heike and Menzel, Henning}, title = {Encapsulation of proteins in hydrogel carrier systems for controlled drug delivery influence of network structure and drug size on release rate}, series = {Journal of biotechnology}, volume = {163}, journal = {Journal of biotechnology}, number = {2}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0168-1656}, doi = {10.1016/j.jbiotec.2012.06.036}, pages = {243 -- 249}, year = {2013}, abstract = {Novel hydrogels based on hydroxyethyl starch modified with polyethylene glycol methacrylate (HES-P(EG)(6)MA) were developed as delivery system for the controlled release of proteins. Since the drug release behavior is supposed to be related to the pore structure of the hydrogel network the pore sizes were determined by cryo-SEM, which is a mild technique for imaging on a nanometer scale. The results showed a decreasing pore size and an increase in pore homogeneity with increasing polymer concentration. Furthermore, the mesh sizes of the hydrogels were calculated based on swelling data. Pore and mesh size were significantly different which indicates that both structures are present in the hydrogel. The resulting structural model was correlated with release data for bulk hydrogel cylinders loaded with FITC-dextran and hydrogel microspheres loaded with FITC-IgG and FITC-dextran of different molecular size. The initial release depended much on the relation between hydrodynamic diameter and pore size while the long term release of the incorporated substances was predominantly controlled by degradation of the network of the much smaller meshes.}, language = {en} } @article{BeschererMunzkeReichetal.2013, author = {Bescherer, Klaus and Munzke, Dorit and Reich, Oliver and Loock, Hans-Peter}, title = {Fabrication and modeling of multimode fiber lenses}, series = {Applied optics}, volume = {52}, journal = {Applied optics}, number = {4}, publisher = {Optical Society of America}, address = {Washington}, issn = {1559-128X}, doi = {10.1364/AO.52.000B40}, pages = {B40 -- B45}, year = {2013}, abstract = {We report on the fabrication, modeling, and experimental verification of the emission of fiber lenses fabricated on multimode fibers in different media. Concave fiber lenses with a radius of 150 mu m were fabricated onto a multimode silica fiber (100 mu m core) by grinding and polishing against a ruby sphere template. In our theoretical model we assume that the fiber guides light from a Lambertian light source and that the emission cone is governed solely by the range of permitted emission angles. We investigate concave and convex lenses at 532 nm with different radii and in a variety of surrounding media from air (n(0) = 1.00) to sapphire (n(0) = 1.77). It was found that noticeable focusing or defocusing effects of a silica fiber lens in ethanol (n(0) = 1.36) and dimethyl sulfoxide (DMSO) (n(0) = 1.48) are only observed when the fiber lens radius was less than the fiber diameter.}, language = {en} } @misc{BleekTaubert2013, author = {Bleek, Katrin and Taubert, Andreas}, title = {New developments in polymer-controlled, bioinspired calcium phosphate mineralization from aqueous solution}, series = {Acta biomaterialia}, volume = {9}, journal = {Acta biomaterialia}, number = {5}, publisher = {Elsevier}, address = {Oxford}, issn = {1742-7061}, doi = {10.1016/j.actbio.2012.12.027}, pages = {6283 -- 6321}, year = {2013}, abstract = {The polymer-controlled and bioinspired precipitation of inorganic minerals from aqueous solution at near-ambient or physiological conditions avoiding high temperatures or organic solvents is a key research area in materials science. Polymer-controlled mineralization has been studied as a model for biomineralization and for the synthesis of (bioinspired and biocompatible) hybrid materials for a virtually unlimited number of applications. Calcium phosphate mineralization is of particular interest for bone and dental repair. Numerous studies have therefore addressed the mineralization of calcium phosphate using a wide variety of low- and high-molecular-weight additives. In spite of the growing interest and increasing number of experimental and theoretical data, the mechanisms of polymer-controlled calcium phosphate mineralization are not entirely clear to date, although the field has made significant progress in the last years. A set of elegant experiments and calculations has shed light on some details of mineral formation, but it is currently not possible to preprogram a mineralization reaction to yield a desired product for a specific application. The current article therefore summarizes and discusses the influence of (macro)molecular entities such as polymers, peptides, proteins and gels on biomimetic calcium phosphate mineralization from aqueous solution. It focuses on strategies to tune the kinetics, morphologies, final dimensions and crystal phases of calcium phosphate, as well as on mechanistic considerations.}, language = {en} } @misc{BleekTaubert2013, author = {Bleek, Katrin and Taubert, Andreas}, title = {New developments in polymer-controlled, bio-inspired calcium phosphate mineralization from aqueous solution}, series = {Acta biomaterialia}, volume = {9}, journal = {Acta biomaterialia}, number = {9}, publisher = {Elsevier}, address = {Oxford}, issn = {1742-7061}, doi = {10.1016/j.actbio.2013.05.007}, pages = {8466 -- 8466}, year = {2013}, language = {en} } @article{Boese2013, author = {Boese, Adrian Daniel}, title = {Assessment of coupled cluster theory and more approximate methods for hydrogen bonded systems}, series = {Journal of chemical theory and computation}, volume = {9}, journal = {Journal of chemical theory and computation}, number = {10}, publisher = {American Chemical Society}, address = {Washington}, issn = {1549-9618}, doi = {10.1021/ct400558w}, pages = {4403 -- 4413}, year = {2013}, abstract = {To assess the accuracy of post-Hartree-Fock methods like CCSD(T), MP3, MP2.5, MP2, SCS-MP2, SOS-MP2, and DFT-SAPT, we evaluated several effects going beyond valence-correlated CCSD(T). For 16 small hydrogen bonded systems, CCSD(T) achieves an RMS error of 0.17 kJ/mol in the dissociation energy compared to our best estimate, which is a composite method akin to W4 theory. The error of CCSD(T) is thus much lower than for atomization energies. MP2 is surprisingly accurate for these systems with an RMS error of 1.3 kJ/mol. MP2.5 yields a clear improvement over MP2 (RMS of 0.5 kJ/mol) but still has an error about 3 times as large as CCSD(T) for the absolute RMS and almost 10 times as large for the relative RMS. error. Neither SCS-MP2, SOS-MP2, nor DFT-SAPT yield lower errors than MP2. With a Delta CCSD(T) correction to MP2, the basis set limit is readily achieved when employing diffuse functions-without these, the convergence is rather slow.}, language = {en} } @article{BrendlerRiebeRitscheletal.2013, author = {Brendler, Christian and Riebe, Daniel and Ritschel, Thomas and Beitz, Toralf and L{\"o}hmannsr{\"o}ben, Hans-Gerd}, title = {Investigation of neuroleptics and other aromatic compounds by laser-based ion mobility mass spectrometry}, series = {Analytical \& bioanalytical chemistry}, volume = {405}, journal = {Analytical \& bioanalytical chemistry}, number = {22}, publisher = {Springer}, address = {Heidelberg}, issn = {1618-2642}, doi = {10.1007/s00216-012-6654-7}, pages = {7019 -- 7029}, year = {2013}, abstract = {Laser-based ion mobility (IM) spectrometry was used for the detection of neuroleptics and PAH. A gas chromatograph was connected to the IM spectrometer in order to investigate compounds with low vapour pressure. The substances were ionized by resonant two-photon ionization at the wavelengths lambda = 213 and 266 nm and pulse energies between 50 and 300 mu J. Ion mobilities, linear ranges, limits of detection and response factors are reported. Limits of detection for the substances are in the range of 1-50 fmol. Additionally, the mechanism of laser ionization at atmospheric pressure was investigated. First, the primary product ions were determined by a laser-based time-of-flight mass spectrometer with effusive sample introduction. Then, a combination of a laser-based IM spectrometer and an ion trap mass spectrometer was developed and characterized to elucidate secondary ion-molecule reactions that can occur at atmospheric pressure. Some substances, namely naphthalene, anthracene, promazine and thioridazine, could be detected as primary ions (radical cations), while other substances, in particular acridine, phenothiazine and chlorprothixene, are detected as secondary ions (protonated molecules). The results are interpreted on the basis of quantum chemical calculations, and an ionization mechanism is proposed.}, language = {en} } @article{BullerLaschewskyWischerhoff2013, author = {Buller, Jens and Laschewsky, Andr{\´e} and Wischerhoff, Erik}, title = {Photoreactive oligoethylene glycol polymers - versatile compounds for surface modification by thin hydrogel films}, series = {Soft matter}, volume = {9}, journal = {Soft matter}, number = {3}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1744-683X}, doi = {10.1039/c2sm26879e}, pages = {929 -- 937}, year = {2013}, abstract = {Solid surfaces are modified using photo-crosslinkable copolymers based on oligo(ethylene glycol) methacrylate (OEGMA) bearing 2-(4-benzoylphenoxy) ethyl methacrylate (BPEM) as a photosensitive crosslinking unit. Thin films of about 100 nm are formed by spin-coating these a priori highly biocompatible copolymers onto silicon substrates. Subsequent UV-irradiation assures immobilization and crosslinking of the hydrogel films. Their stability is controlled by the number of crosslinker units per chain and the molar mass of the copolymers. The swelling of the hydrogel layers, as investigated by ellipsometry, can be tuned by the crosslinker content in the copolymer. If films are built from the ternary copolymers of OEGMA, BPEM and 2-(2-methoxyethoxy) ethyl methacrylate (MEO(2)MA), the hydrogel films exhibit a swelling/deswelling transition of the lower critical solution temperature (LCST) type. The observed thermally induced hydrogel collapse is fully reversible and the onset temperature of the transition can be tuned at will by the copolymer composition. Different from analogously prepared thermo-responsive hydrogel films of photocrosslinked poly(N-isopropylacrylamide), the swelling-deswelling transition occurs more gradually, but shows no hysteresis.}, language = {en} } @article{ChechkinZaidLomholtetal.2013, author = {Chechkin, Aleksei V. and Zaid, I. M. and Lomholt, M. A. and Sokolov, Igor M. and Metzler, Ralf}, title = {Bulk-mediated surface diffusion on a cylinder in the fast exchange limit}, series = {Mathematical modelling of natural phenomena}, volume = {8}, journal = {Mathematical modelling of natural phenomena}, number = {2}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {0973-5348}, doi = {10.1051/mmnp/20138208}, pages = {114 -- 126}, year = {2013}, abstract = {In various biological systems and small scale technological applications particles transiently bind to a cylindrical surface. Upon unbinding the particles diffuse in the vicinal bulk before rebinding to the surface. Such bulk-mediated excursions give rise to an effective surface translation, for which we here derive and discuss the dynamic equations, including additional surface diffusion. We discuss the time evolution of the number of surface-bound particles, the effective surface mean squared displacement, and the surface propagator. In particular, we observe sub- and superdiffusive regimes. A plateau of the surface mean-squared displacement reflects a stalling of the surface diffusion at longer times. Finally, the corresponding first passage problem for the cylindrical geometry is analysed.}, language = {en} } @article{CodorniuHernandezBoeseKusalik2013, author = {Codorniu-Hernandez, Edelsys and Boese, Adrian Daniel and Kusalik, Peter G.}, title = {The hemibond as an alternative condensed phase structure for the hydroxyl radical}, series = {Canadian journal of chemistry = Revue canadienne de chimie}, volume = {91}, journal = {Canadian journal of chemistry = Revue canadienne de chimie}, number = {7}, publisher = {NRC Research Press}, address = {Ottawa}, issn = {0008-4042}, doi = {10.1139/cjc-2012-0520}, pages = {544 -- 551}, year = {2013}, abstract = {Despite the critical importance of the hydroxyl radical in major scientific fields, there are still open questions on the behavior of this species in the aqueous phase. In particular, there has been much debate on the existence of a hemibonded interaction between the hydroxyl radical and water molecules. While some reports indicate that the hemibonded radical might explain some experimental data, others have claimed that this interaction is simply a density functional theory (DFT) artifact. Here, we provide results from high level (basis set limit of coupled-cluster levels up to single, double, triple excitations (CCSD(T)) and beyond) ab initio calculations of different OH center dot(H2O)(n) clusters in the gas phase to accurately explore the existence of the hemibonded interaction and its energy difference with respect to other well-defined hydrogen bond interactions. Additional comparisons with second order perturbation theory (MP2) and DFT are also presented. Constrained molecular dynamics was applied to determine the free energy for the formation/disruption and ice systems. Overall, our findings confirm that the hemibond can be an alternative structure for the hydroxyl radical in the condensed phase when the formation of hydrogen bonds is impeded. These results will aid the understanding of theoretical and experimental data and help future experimental designs for the detection of this important species.}, language = {en} } @phdthesis{Dechtrirat2013, author = {Dechtrirat, Decha}, title = {Combination of self-assembled monolayers (SAMs) and molecularly imprinted polymers (MIPs) in biomimetic sensors}, address = {Potsdam}, pages = {107 S.}, year = {2013}, language = {en} } @article{DemetriouPashalidisNicolaidesetal.2013, author = {Demetriou, Antri and Pashalidis, Ioannis and Nicolaides, Athanassios V. and Kumke, Michael Uwe}, title = {Surface mechanism of the boron adsorption on alumina in aqueous solutions}, series = {Desalination and water treatment : science and engineering}, volume = {51}, journal = {Desalination and water treatment : science and engineering}, number = {31-33}, publisher = {Taylor \& Francis Group}, address = {Philadelphia}, issn = {1944-3994}, doi = {10.1080/19443994.2013.764354}, pages = {6130 -- 6136}, year = {2013}, abstract = {The adsorption of boron (boric acid) from aqueous solutions on alumina has been investigated at pH 8.0, I=0.1M NaClO4, T=22 +/- 3 degrees C, and under normal atmospheric conditions. The characterization of the adsorbed species was performed by Raman spectroscopy and the spectroscopic speciation was assisted by theoretical DFT calculations. Evaluation of the spectroscopic data points to the formation of inner-sphere surface complexes and indicates the formation of two different types of adsorbed boron species. The theoretical calculations corroborate the spectroscopic data and indicate that at low boron concentration the monodentate surface species dominates, whereas increased boron concentration favors the formation of a bidentate surface species. Assuming low coverage, the conditional formation constant for the monodentate surface species has been evaluated to be log=4.1 +/- 0.1.}, language = {en} } @article{DodooBalzerHugeletal.2013, author = {Dodoo, Samuel and Balzer, Bizan N. and Hugel, Thorsten and Laschewsky, Andr{\´e} and von Klitzing, Regine}, title = {Effect of ionic strength and layer number on swelling of polyelectrolyte multilayers in water vapour}, series = {Soft materials}, volume = {11}, journal = {Soft materials}, number = {2}, publisher = {Taylor \& Francis Group}, address = {Philadelphia}, issn = {1539-445X}, doi = {10.1080/1539445X.2011.607203}, pages = {157 -- 164}, year = {2013}, abstract = {The swelling behavior of polyelectrolyte multilayers (PEMs) of poly(sodium-4 styrene sulfonate) (PSS) and poly(diallyl dimethyl ammonium chloride) (PDADMAC) prepared from aqueous solution of 0.1 M and 0.5 M NaCl are investigated by ellipsometry and Atomic Force Microscopy (AFM). From 1 double-layer up to 4 double-layers of 0.1 M NaCl, the amount of swelling water in the PEMs decreases with increasing number of adsorbed double layers due to an increase in polyelectrolyte density as a result of the attraction between the positively charged outermost PDADMAC layer and the Si substrate. From 6 double layers to 30 double layers, the attraction is reduced due to a much larger distance between substrate and outermost layer leading to a much lower polyelectrolyte density and higher swelling water. In PEMs prepared from aqueous solution of 0.5 M NaCl, the amount of water constantly increases which is related to a monotonically decreasing polyelectrolyte density with increasing number of polyelectrolyte layers. Studies of the surface topology also indicate a transition from a more substrate affected interphase behavior to a continuum properties of the polyelectrolyte multilayers. The threshold for the transition from interphase to continuum behavior depends on the preparation conditions of the PEM.}, language = {en} } @article{DolyaRojasKosmellaetal.2013, author = {Dolya, Natalya and Rojas, Oscar and Kosmella, Sabine and Tiersch, Brigitte and Koetz, Joachim and Kudaibergenov, Sarkyt}, title = {"One-Pot" in situ frmation of Gold Nanoparticles within Poly(acrylamide) Hydrogels}, series = {Macromolecular chemistry and physics}, volume = {214}, journal = {Macromolecular chemistry and physics}, number = {10}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1022-1352}, doi = {10.1002/macp.201200727}, pages = {1114 -- 1121}, year = {2013}, abstract = {This paper focuses on two different strategies to incorporate gold nanoparticles (AuNPs) into the matrix of polyacrylamide (PAAm) hydrogels. Poly(ethyleneimine) (PEI) is used as both reducing and stabilizing agent for the formation of AuNPs. In addition, the influence of an ionic liquid (IL) (i.e., 1-ethyl-3-methylimidazolium ethylsulfate) on the stability of the nanoparticles and their immobilization in the hydrogel is investigated The results show that AuNPs surrounded by a shell containing PEI and IL, synthesized according to the one-pot approach, are much better immobilized within the PAAm hydrogel. Hereby, the IL is responsible for structural changes in the hydrogel as well as the improved stabilization and embedding of the AuNPs into the polymer gel matrix.}, language = {en} } @phdthesis{Dominguez2013, author = {Dom{\´i}nguez, Pablo Haro}, title = {Nanostructured poly(benzimidazole)s by chemical modification}, address = {Potsdam}, pages = {95, XXVIII S.}, year = {2013}, language = {en} } @article{DraudeGallaPelsteretal.2013, author = {Draude, F. and Galla, S. and Pelster, Axel and Tentschert, J. and Jungnickel, H. and Haase, Alfred and Mantion, Alexandre and Thuenemann, Andreas F. and Taubert, Andreas and Luch, A. and Arlinghaus, H. F.}, title = {ToF-SIMS and Laser-SNMS analysis of macrophages after exposure to silver nanoparticles}, series = {Surface and interface analysis : an international journal devoted to the development and application of techniques for the analysis surfaces, interfaces and thin films}, volume = {45}, journal = {Surface and interface analysis : an international journal devoted to the development and application of techniques for the analysis surfaces, interfaces and thin films}, number = {1}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0142-2421}, doi = {10.1002/sia.4902}, pages = {286 -- 289}, year = {2013}, abstract = {Silver nanoparticles (SNPs) are among the most commercialized nanoparticles because of their antibacterial effects. Besides being employed, e. g. as a coatingmaterial for sterile surfaces in household articles and appliances, the particles are also used in a broad range of medical applications. Their antibacterial properties make SNPs especially useful for wound disinfection or as a coating material for prostheses and surgical instruments. Because of their optical characteristics, the particles are of increasing interest in biodetection as well. Despite the widespread use of SNPs, there is little knowledge of their toxicity. Time-of-flight secondary ion mass spectrometry (ToF-SIMS) and laser post-ionization secondary neutral mass spectrometry (Laser-SNMS) were used to investigate the effects of SNPs on human macrophages derived from THP-1 cells in vitro. For this purpose, macrophages were exposed to SNPs. The SNP concentration ranges were chosen with regard to functional impairments of the macrophages. To optimize the analysis of the macrophages, a special silicon wafer sandwich preparation technique was employed; ToF-SIMS was employed to characterize fragments originating from macrophage cell membranes. With the use of this optimized sample preparation method, the SNP-exposed macrophages were analyzed with ToF-SIMS and with Laser-SNMS. With Laser-SNMS, the three-dimensional distribution of SNPs in cells could be readily detected with very high efficiency, sensitivity, and submicron lateral resolution. We found an accumulation of SNPs directly beneath the cell membrane in a nanoparticular state as well as agglomerations of SNPs inside the cells.}, language = {en} } @article{DzambaskiMarkovicKleinpeteretal.2013, author = {Dzambaski, Zdravko and Markovic, Rade and Kleinpeter, Erich and Baranac-Stojanovic, Marija}, title = {2-Alkylidene-4-oxothiazolidine S-oxides - synthesis and stereochemistry}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {31}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2013.05.087}, pages = {6436 -- 6447}, year = {2013}, abstract = {A series of 5-unsubstituted and 5-substituted 2-alkylidene-4-oxothiazolidine-S-oxides were synthesized by the sulfur-oxidation with m-CPBA. The stereochemistry of 5-substituted sulfoxides was determined by means of NMR spectroscopy and DFT theoretical calculations. It was found that the thermodynamically less stable anti-isomer was initially formed in the course of the oxidation, but it underwent epimerization to the mixture enriched in the more stable syn-isomer, during the work-up process. The higher stability of syn-isomers is ascribed to the stronger hyperconjugative sigma(C-H)->sigma*(S-O) interaction versus the weaker sigma(C-C)->sigma*(S-O) delocalization in their anti-counterparts and to the existence of intramolecular 1,5-CH center dot center dot center dot C hydrogen bonds.}, language = {en} } @article{EichSchmaelzlinLoehmannsroeben2013, author = {Eich, Susanne and Schm{\"a}lzlin, Elmar and L{\"o}hmannsr{\"o}ben, Hans-Gerd}, title = {Distributed fiber optical sensing of Oxygen with optical time domain reflectometry}, series = {Sensors}, volume = {13}, journal = {Sensors}, number = {6}, publisher = {MDPI}, address = {Basel}, issn = {1424-8220}, doi = {10.3390/s130607170}, pages = {7170 -- 7183}, year = {2013}, abstract = {In many biological and environmental applications spatially resolved sensing of molecular oxygen is desirable. A powerful tool for distributed measurements is optical time domain reflectometry (OTDR) which is often used in the field of telecommunications. We combine this technique with a novel optical oxygen sensor dye, triangular-[4] phenylene (TP), immobilized in a polymer matrix. The TP luminescence decay time is 86 ns. The short decay time of the sensor dye is suitable to achieve a spatial resolution of some meters. In this paper we present the development and characterization of a reflectometer in the UV range of the electromagnetic spectrum as well as optical oxygen sensing with different fiber arrangements.}, language = {en} } @article{FechnerKoetz2013, author = {Fechner, Mabya and Koetz, Joachim}, title = {Polyampholyte/Surfactant complexes at the water-air interface a surface tension study}, series = {Langmuir}, volume = {29}, journal = {Langmuir}, number = {25}, publisher = {American Chemical Society}, address = {Washington}, issn = {0743-7463}, doi = {10.1021/la401576q}, pages = {7600 -- 7606}, year = {2013}, abstract = {The present paper is related to interactions between strongly alternating polyampholytes, i.e., copolymers of N,N'-diallyl-N,N'-dimethylammonium chloride and maleamic acid derivatives, varying in hydrophobicity and excess charges and the oppositely charged anionic surfactant sodium dodecyl sulfate (SDS). Surface tension measurements have revealed a complex behavior with the formation of polyampholyte-SDS complexes at water air interfaces which depends on both the hydrophobic character of the polyampholyte and electrostatic attractive forces between the polyampholyte and the anionic surfactant in dependence on pH. Hereby, maleamic acid copolymers with additional carboxylic groups in the phenylic side chain show a significant lower surface tension at the critical association concentration (CAC) due to the formation of surface-active SDS complexes and multicomplexes. In the presence of only one carboxylic group in the p-position the CAC can be strongly shifted by varying the pH due to repulsive electrostatic interactions.}, language = {en} } @article{FischerSchmidtStrauchetal.2013, author = {Fischer, Sabrina and Schmidt, Johannes and Strauch, Peter and Thomas, Arne}, title = {An anionic microporous polymer network prepared by the polymerization of weakly coordinating anions}, series = {Angewandte Chemie : a journal of the Gesellschaft Deutscher Chemiker ; International edition}, volume = {52}, journal = {Angewandte Chemie : a journal of the Gesellschaft Deutscher Chemiker ; International edition}, number = {46}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1433-7851}, doi = {10.1002/anie.201303045}, pages = {12174 -- 12178}, year = {2013}, language = {en} } @article{FribergKovachKoetz2013, author = {Friberg, Stig E. and Kovach, Ildiko and Koetz, Joachim}, title = {Equilibrium topology and partial inversion of Janus Drops - a numerical analysis}, series = {ChemPhysChem : a European journal of chemical physics and physical chemistry}, volume = {14}, journal = {ChemPhysChem : a European journal of chemical physics and physical chemistry}, number = {16}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1439-4235}, doi = {10.1002/cphc.201300635}, pages = {3772 -- 3776}, year = {2013}, abstract = {The equilibrium topology of an aqueous Janus emulsion of two oils, O1 and O2, with water, W, [(O1+O2)/W], is numerically evaluated with the following realistic interfacial tensions (): (O2/W)=5 mNm(-1), (O1/O2)=1 mNm(-1), and (O1/W) varies within the range 4-5 mNm(-1), which is the limiting range for stable Janus drop topology. The relative significance of the two independently pivotal factors for the topology is evaluated, that is, the local equilibrium at the line of contact between the three liquids and the volume fraction of the two dispersed liquids within the drop. The results reveal a dominant effect of the local equilibrium on the fraction of the O2 drop surface that is covered by O1. In contrast, for a constant volume of O2, the impact of the interfacial tension balance on the limit of the coverage is modest for an infinite volume of O1. Interestingly, when the O1 volume exceeds this value, an emulsion inversion occurs, and the O1 portion of the (O1+O2)/W topology becomes a continuous phase, generating a (W+O2)/O1 Janus configuration.}, language = {en} } @article{FuechselSchimkaSaalfrank2013, author = {F{\"u}chsel, Gernot and Schimka, Selina and Saalfrank, Peter}, title = {On the role of electronic friction for dissociative adsorption and scattering of hydrogen molecules at a Ru(0001) surface}, series = {The journal of physical chemistry : A, Molecules, spectroscopy, kinetics, environment \& general theory}, volume = {117}, journal = {The journal of physical chemistry : A, Molecules, spectroscopy, kinetics, environment \& general theory}, number = {36}, publisher = {American Chemical Society}, address = {Washington}, issn = {1089-5639}, doi = {10.1021/jp403860p}, pages = {8761 -- 8769}, year = {2013}, abstract = {The role of electronic friction and, more generally, of nonadiabatic effects during dynamical processes at the gas/metal surface interface is still a matter of discussion. In particular, it is not clear if electronic nonadiabaticity has an effect under "mild" conditions, when molecules in low rovibrational states interact with a metal surface. In this paper, we investigate the role of electronic friction on the dissociative sticking and (inelastic) scattering of vibrationally and rotationally cold H-2 molecules at a Ru(0001) surface theoretically. For this purpose, classical molecular dynamics with electronic friction (MDEF) calculations are performed and compared to MD simulations without friction. The two H atoms move on a six-dimensional potential energy surface generated from gradient-corrected density functional theory (DFT), that is, all molecular degrees of freedom are accounted for. Electronic friction is included via atomic friction coefficients obtained from an embedded atom, free electron gas (FEG) model, with embedding densities taken from gradient-corrected DFT. We find that within this model, dissociative sticking probabilities as a function of impact kinetic energies and impact angles are hardly affected by nonadiabatic effects. If one accounts for a possibly enhanced electronic friction near the dissociation barrier, on the other hand, reduced sticking probabilities are observed, in particular, at high impact energies. Further, there is always an influence on inelastic scattering, in particular, as far as the translational and internal energy distribution of the reflected molecules is concerned. Additionally, our results shed light on the role played by the velocity distribution of the incident molecular beam for adsorption probabilities, where, in particular, at higher impact energies, large effects are found.}, language = {en} } @article{FuechselTremblayKlamrothetal.2013, author = {F{\"u}chsel, Gernot and Tremblay, Jean Christophe and Klamroth, Tillmann and Saalfrank, Peter}, title = {Quantum dynamical simulations of the femtosecond-laser-induced ultrafast desorption of H2 and D2 from Ru(0001)}, series = {ChemPhysChem : a European journal of chemical physics and physical chemistry}, volume = {14}, journal = {ChemPhysChem : a European journal of chemical physics and physical chemistry}, number = {7}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1439-4235}, doi = {10.1002/cphc.201200940}, pages = {1471 -- 1478}, year = {2013}, abstract = {We investigate the recombinative desorption of hydrogen and deuterium from a Ru(0001) surface initiated by femtosecond laser pulses. We adopt a quantum mechanical two-state model including three molecular degrees of freedom to describe the dynamics within the desorption induced by electronic transition (DIET) limit. The energy distributions as well as the state-resolved and ensemble properties of the desorbed molecules are analyzed in detail by using the time-energy method. Our results shed light on the experimentally observed 1) large isotopic effects regarding desorption yields and translational energies and 2) the nonequal energy partitioning into internal and translational modes. In particular, it is shown that a single temperature is sufficient to characterize the energy distributions for all degrees of freedom. Further, we confirm that quantization effects play an important role in the determination of the energy partitioning.}, language = {en} } @article{GehneSydowDatheetal.2013, author = {Gehne, S{\"o}ren and Sydow, Karl and Dathe, Margitta and Kumke, Michael Uwe}, title = {Characterization of cell-penetrating lipopeptide micelles by spectroscopic methods}, series = {The journal of physical chemistry : B, Condensed matter, materials, surfaces, interfaces \& biophysical chemistry}, volume = {117}, journal = {The journal of physical chemistry : B, Condensed matter, materials, surfaces, interfaces \& biophysical chemistry}, number = {46}, publisher = {American Chemical Society}, address = {Washington}, issn = {1520-6106}, doi = {10.1021/jp406053g}, pages = {14215 -- 14225}, year = {2013}, abstract = {The transport of bioactive compounds to the site of action is a great challenge. A promising approach to overcome application-related problems is the development of targeting colloidal transport systems, such as micelles which are equipped with uptake mediating moieties. Here, we investigated a set of novel lipopeptides which exhibit a surfactant-like structure due to attachment of two palmitoyl chains to the Nterminus of cationic or anionic amino acid sequences. We analyzed the association behavior of these lipopeptides by using 5(6)-carboxyfluorescein (CF)-labeled derivatives as a fluorescent probe and different spectroscopic methods such as fluorescence anisotropy and fluorescence correlation spectroscopy (FCS). The photophysical properties as well as the diffusion and rotational movements of the CF-labeled lipopeptides were exploited to determine the cmc and the size of the micelles consisting of lipopeptides. We could distinguish cationic and anionic lipopeptides by their association behavior and by studying the interactions with mouse brain capillary endothelial cells (b.end3). The cationic derivatives turned out to be very strong surfactants with a very low cmc in the micromolar range (0.5-14 mu M). The unique combination of micelle-forming property and cell-penetrating ability can pave the road for the development of a novel class of efficient drug carrier systems.}, language = {en} } @article{GeisslerStuflerLoehmannsroebenetal.2013, author = {Geissler, Daniel and Stufler, Stefan and L{\"o}hmannsr{\"o}ben, Hans-Gerd and Hildebrandt, Niko}, title = {Six-color time-resolved forster resonance energy transfer for ultrasensitive multiplexed biosensing}, series = {Journal of the American Chemical Society}, volume = {135}, journal = {Journal of the American Chemical Society}, number = {3}, publisher = {American Chemical Society}, address = {Washington}, issn = {0002-7863}, doi = {10.1021/ja310317n}, pages = {1102 -- 1109}, year = {2013}, abstract = {Simultaneous monitoring of multiple molecular interactions and multiplexed detection of several diagnostic biomarkers at very low concentrations have become important issues in advanced biological and chemical sensing. Here we present an optically multiplexed six-color Forster resonance energy transfer (FRET) biosensor for simultaneous monitoring of five different individual binding events. We combined simultaneous FRET from one Tb complex to five different organic dyes measured in a filter-based time-resolved detection format with a sophisticated spectral crosstalk correction, which results in very efficient background suppression. The advantages and robustness of the multiplexed FRET sensor were exemplified by analyzing a 15-component lung cancer immunoassay involving 10 different antibodies and five different tumor markers in a single 50 mu L human serum sample. The multiplexed biosensor offers clinically relevant detection limits in the low picomolar (ng/mL) concentration range for all five markers, thus providing an effective early screening tool for lung cancer with the possibility of distinguishing small-cell from non-small-cell lung carcinoma. This novel technology will open new doors for multiple biomarker diagnostics as well as multiplexed real-time imaging and spectroscopy.}, language = {en} } @article{GhobadiHeuchelKratzetal.2013, author = {Ghobadi, Ehsan and Heuchel, Matthias and Kratz, Karl and Lendlein, Andreas}, title = {Simulating the shape-Memory behavior of amorphous switching domains of Poly(L-lactide) by molecular dynamics}, series = {Macromolecular chemistry and physics}, volume = {214}, journal = {Macromolecular chemistry and physics}, number = {11}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1022-1352}, doi = {10.1002/macp.201200450}, pages = {1273 -- 1283}, year = {2013}, abstract = {The thermally induced shape-memory effect of polymers is typically characterized by cyclic uniaxial thermomechanical tests. Here, a molecular-dynamics (MD) simulation approach of such a cyclic uniaxial thermomechanical test is presented for amorphous switching domains of poly(L-lactide) (PLLA). Uniaxial deformation of the constructed PLLA models is simulated with a Parinello-Rahman scheme, as well as a pragmatic geometrical approach. We are able to describe two subsequent test cycles using the presented simulation approach. The obtained simulated shape-memory properties in both test cycles are similar and independent of the applied deformation protocols. The simulated PLLA shows high shape fixity ratios (Rf 94\%), but only a moderate shape recovery ratio is obtained (Rr 30\%). Finally, the structural changes during the simulated test are characterized by analysis of the changes in the dihedral angle distributions.}, language = {en} } @article{GrimmMeyerCzaplaetal.2013, author = {Grimm, Christiane and Meyer, Thomas and Czapla, Sylvia and Nikolaus, J{\"o}rg and Scheidt, Holger A. and Vogel, Alexander and Herrmann, Andreas and Wessig, Pablo and Huster, Daniel and M{\"u}ller, Peter}, title = {Structure and dynamics of molecular rods in membranes application of a Spin-Labeled rod}, series = {Chemistry - a European journal}, volume = {19}, journal = {Chemistry - a European journal}, number = {8}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {0947-6539}, doi = {10.1002/chem.201202500}, pages = {2703 -- 2710}, year = {2013}, abstract = {Molecular rods consisting of a hydrophobic backbone and terminally varying functional groups have been synthesized for applications for the functionalization of membranes. In the present study, we employ a spin-labeled analogue of a recently described new class of molecular rods to characterize their dynamic interactions with membranes. By using the different approaches of ESR and NMR spectroscopy, we show that the spin moiety of the membrane-embedded spin-labeled rod is localized in the upper chain/glycerol region of membranes of different compositions. The rod is embedded within the membrane in a tilted orientation to adjust for the varying hydrophobic thicknesses of these bilayers. This orientation does not perturb the membrane structure. The water solubility of the rod is increased significantly in the presence of certain cyclodextrins. These cyclodextrins also allow the rods to be extracted from the membrane and incorporated into preformed membranes. The latter will improve the future applications of these rods in cellular systems as stable membrane-associated anchors for the functionalization of membrane surfaces.}, language = {en} } @article{HalaskaPevecStrauchetal.2013, author = {Halaska, Jozef and Pevec, Andrej and Strauch, Peter and Kozlevcar, Bojan and Koman, Marian and Moncol, Jan}, title = {Supramolecular hydrogen-bonding networks constructed from copper(II) chlorobenzoates with nicotinamide - Structure and EPR}, series = {Polyhedron : the international journal of inorganic and organometallic chemistry}, volume = {61}, journal = {Polyhedron : the international journal of inorganic and organometallic chemistry}, publisher = {Elsevier}, address = {Oxford}, issn = {0277-5387}, doi = {10.1016/j.poly.2013.05.032}, pages = {20 -- 26}, year = {2013}, abstract = {Nicotinamide (nia) has been employed as a supramolecular reagent in the synthesis of four copper(II) chloro- and dichlorobenzoate (Clbz/Cl(2)bz) complexes. The structures of the compounds [Cu(2-Clbz)(2) (nia)(2)(H2O)(2)] (1), icu(4-clbz)(2)(nia)(2)(H2O)(2)] (2), [Cu(3,5-Cl(2)bz)(2)(nia)(2)(H2O)(2)] (3), and [Cu(2,5-Cl(2)bz)(2) (nia)(2)(H2O)]center dot H2O (4) were determined. All the investigated compounds 1-4 reveal water molecules as coordinated. Their structures show distorted octahedral chromophores (CuN2O2O)-N-II'(2), though some are better described as square-planar or square-pyramid due to a large deviation of the axial ligand away from the octahedral z-axis along with different Cu center dot center dot center dot O (axial) lengths. The equatorial positions are occupied in all four cases by two nitrogen (nia-py) atoms and two carboxylate oxygen atoms of two Clbz/Cl(2)bz ligands, while the axial positions are occupied by water molecules. The EPR spectra reveal for all 1-4 compounds a spin state of S = 1/2, mostly with axial symmetry of the spectra. Their resolution is clearly dependant to the crystal symmetry related equivalence of the magnetic sites. The coordination molecules of all compounds are connected by N-H center dot center dot center dot O and O-H center dot center dot center dot O H-bonds from nicotinamide NH2 groups, carboxylate anions and/or water molecules, which create supramolecular chains or further H-bonded into 2D sheets. Steric hindering of the chlorine atoms of the Clbz/Cl(2)bz, especially seen at the coordination of the water molecules, demonstrates its role at the coordination sphere appearance. Despite this influence, the water molecules in 1-4 always assist at the similar supramolecular H-bonded network, almost at the same manner.}, language = {en} } @article{HarmaPihlasaloCywinskietal.2013, author = {Harma, Harri and Pihlasalo, Sari and Cywinski, Piotr J. and Mikkonen, Piia and Hammann, Tommy and L{\"o}hmannsr{\"o}ben, Hans-Gerd and Hanninen, Pekka}, title = {Protein quantification using resonance energy transfer between donor nanoparticles and acceptor quantum dots}, series = {Analytical chemistry}, volume = {85}, journal = {Analytical chemistry}, number = {5}, publisher = {American Chemical Society}, address = {Washington}, issn = {0003-2700}, doi = {10.1021/ac303586n}, pages = {2921 -- 2926}, year = {2013}, abstract = {A homogeneous time-resolved luminescence resonance energy transfer (TR-LRET) assay has been developed to quantify proteins. The competitive assay is based on resonance energy transfer (RET) between two luminescent nanosized particles. Polystyrene nanoparticles loaded with Eu3+ chelates (EuNPs) act as donors, while protein-coated quantum dots (QDs), either CdSe/ZnS emitting at 655 nm (QD655-strep) or CdSeTe/ZnS with emission wavelength at 705 nm (QD705-strep), are acceptors. In the absence of analyte protein, in our case bovine serum albumin (BSA), the protein-coated QDs bind nonspecifically to the EuNPs, leading to RET. In the presence of analyte proteins, the binding of the QDs to the EuNPs is prevented and the RET signal decreases. RET from the EuNPs to the QDs was confirmed and characterized with steady-state and time-resolved luminescence spectroscopy. In accordance with the Forster theory, the approximate average donor acceptor distance is around 15 nm at RET efficiencies, equal to 15\% for QD655 and 13\% for QD705 acceptor, respectively. The limits of detection are below 10 ng of BSA with less than a 10\% average coefficient of variation. The assay sensitivity is improved, when compared to the most sensitive commercial methods. The presented mix-and-measure method has potential to be implemented into routine protein quantification in biological laboratories.}, language = {en} } @article{HasinovicFribergKovachetal.2013, author = {Hasinovic, Hida and Friberg, Stieg E. and Kovach, Ildyko and Koetz, Joachim}, title = {Janus emulsion drops - equilibrium calculations}, series = {Journal of dispersion science and technology}, volume = {34}, journal = {Journal of dispersion science and technology}, number = {12}, publisher = {Taylor \& Francis Group}, address = {Philadelphia}, issn = {0193-2691}, doi = {10.1080/01932691.2013.763728}, pages = {1683 -- 1689}, year = {2013}, abstract = {Experimental results indicated the contact angles in the drops of Janus emulsions formed in a one-step mixing process to be invariant within a significant range the oil volume ratios, similar to the results from microfluidics emulsification. Since this result points to a connection between the kinetically formed emulsions and the local equilibrium topology of emulsion drops, the effect of interfacial tensions on the morphology of Janus emulsions was estimated from the equilibrium interfacial tensions at the line of contact. Realistic values of the tensions revealed the limited range of these to obtain Janus drops and also offered correlation between the equilibrium entities and the curvature of the interface between the two oils.}, language = {en} } @article{HassMuenzbergBresseletal.2013, author = {Hass, Roland and M{\"u}nzberg, Marvin and Bressel, Lena and Reich, Oliver}, title = {Industrial applications of photon density wave spectroscopy for in-line particle sizing [Invited]}, series = {Applied optics}, volume = {52}, journal = {Applied optics}, number = {7}, publisher = {Optical Society of America}, address = {Washington}, issn = {1559-128X}, doi = {10.1364/AO.52.001423}, pages = {1423 -- 1431}, year = {2013}, abstract = {Optical spectroscopy in highly turbid liquid material is often restricted by simultaneous occurrence of absorption and scattering of light. Photon Density Wave (PDW) spectroscopy is one of the very few, yet widely unknown, technologies for the independent quantification of these two optical processes. Here, a concise overview about modern PDW spectroscopy is given, including all necessary equations concerning the optical description of the investigated material, dependent light scattering, particle sizing, and PDW spectroscopy itself. Additionally, it is shown how the ambiguity in particle sizing, arising from Mie theory, can be correctly solved. Due to its high temporal resolution, its applicability to highest particle concentrations, and its purely fiber-optical probe, PDW spectroscopy possesses all fundamental characteristics for optical in-line process analysis. Several application examples from the chemical industry are presented. (C) 2013 Optical Society of America}, language = {en} } @article{HerderUtechtManickeetal.2013, author = {Herder, Martin and Utecht, Manuel Martin and Manicke, Nicole and Grubert, Lutz and P{\"a}tzel, Michael and Saalfrank, Peter and Hecht, Stefan}, title = {Switching with orthogonal stimuli electrochemical ring-closure and photochemical ring-opening of bis(thiazolyl) maleimides}, series = {Chemical science}, volume = {4}, journal = {Chemical science}, number = {3}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {2041-6520}, doi = {10.1039/c2sc21681g}, pages = {1028 -- 1040}, year = {2013}, abstract = {The photochemistry as well as electrochemistry of novel donor-acceptor bis(morpholinothiazolyl)maleimides has been investigated. Proper substitution of these diarylethene-type molecular switches leads to the unique situation in which their ring-closure can only be accomplished electrochemically, while ring-opening can only be achieved photochemically. Hence, these switches operate with orthogonal stimuli, i.e. redox potential and light, respectively. The switch system could be optimized by introducing trifluoromethyl groups at the reactive carbon atoms in order to avoid by-product formation during oxidative ring closure. Both photochemical and electrochemical pathways were investigated for methylated, trifluoromethylated, and nonsymmetrical bis(morpholinothiazolyl) maleimides as well as the bis(morpholinothiazolyl) cyclopentene reference compound. With the aid of the nonsymmetrical "mixed" derivative, the mechanism of electrochemically driven ring closure could be elucidated and seems to proceed via a dicationic intermediate generated by two-fold oxidation. All experimental work has been complemented by density functional theory that provides detailed insights into the thermodynamics of the ring-open and closed forms, the nature of their excited states, and the reactivity of their neutral as well as ionized species in different electronic configurations. The particular diarylethene systems described herein could serve in multifunctional (logic) devices operated by different stimuli (inputs) and may pave the way to converting light into electrical energy via photoinduced "pumping" of redox-active meta-stable states.}, language = {en} } @article{HeydariPastorizaSantosFlehretal.2013, author = {Heydari, Esmaeil and Pastoriza-Santos, Isabel and Flehr, Roman and Liz-Marzan, Luis M. and Stumpe, Joachim}, title = {Nanoplasmonic enhancement of the emission of semiconductor polymer composites}, series = {The journal of physical chemistry : C, Nanomaterials and interfaces}, volume = {117}, journal = {The journal of physical chemistry : C, Nanomaterials and interfaces}, number = {32}, publisher = {American Chemical Society}, address = {Washington}, issn = {1932-7447}, doi = {10.1021/jp404068m}, pages = {16577 -- 16583}, year = {2013}, abstract = {We report on the influence of localized surface plasmon resonance excitation of Au@SiO2 core-shell nanoparticles on the amplified spontaneous emission of a semiconductor polymer composite (F8BT/MEH-PPV). Au@SiO2 nanoparticles are compatible with the donor-acceptor polymer matrix and get uniformly distributed within the whole polymer film. The plasmon resonance band of the nanoparticles correlates with both the emission and excitation spectra of the polymer composite, as well as with the donor emission and acceptor excitation spectra. We demonstrate that resonantly excited Au@SiO2 nanoparticles enhance the amplified spontaneous emission and the modal gain of the polymer films. The measurement of influential factors reveals that the emission is enhanced predominantly by the increase of acceptor excitation rate, which is accompanied by depletion of the FRET efficiency and increase of quantum yield. The enhancement factor is increased by both introducing a higher loading of plasmonic nanoparticles in the polymer film and increasing the excitation energy. This work shows that these plasmonic nanoantennas are able to enhance the stimulated emission of semiconductor polymers by improving the size mismatch between the excitation light and the emitting polymer.}, language = {en} } @article{InalKoelschChiappisietal.2013, author = {Inal, Sahika and K{\"o}lsch, Jonas D. and Chiappisi, Leonardo and Janietz, Dietmar and Gradzielski, Michael and Laschewsky, Andr{\´e} and Neher, Dieter}, title = {Structure-related differences in the temperature-regulated fluorescence response of LCST type polymers}, doi = {10.1039/C3TC31304B}, year = {2013}, abstract = {We demonstrate new fluorophore-labelled materials based on acrylamide and on oligo(ethylene glycol) (OEG) bearing thermoresponsive polymers for sensing purposes and investigate their thermally induced solubility transitions. It is found that the emission properties of the polarity-sensitive (solvatochromic) naphthalimide derivative attached to three different thermoresponsive polymers are highly specific to the exact chemical structure of the macromolecule. While the dye emits very weakly below the LCST when incorporated into poly(N-isopropylacrylamide) (pNIPAm) or into a polyacrylate backbone bearing only short OEG side chains, it is strongly emissive in polymethacrylates with longer OEG side chains. Heating of the aqueous solutions above their cloud point provokes an abrupt increase of the fluorescence intensity of the labelled pNIPAm, whereas the emission properties of the dye are rather unaffected as OEG-based polyacrylates and methacrylates undergo phase transition. Correlated with laser light scattering studies, these findings are ascribed to the different degrees of pre-aggregation of the chains at low temperatures and to the extent of dehydration that the phase transition evokes. It is concluded that although the temperature-triggered changes in the macroscopic absorption characteristics, related to large-scale alterations of the polymer chain conformation and aggregation, are well detectable and similar for these LCST-type polymers, the micro-environment provided to the dye within each polymer network differs substantially. Considering sensing applications, this finding is of great importance since the temperature-regulated fluorescence response of the polymer depends more on the macromolecular architecture than the type of reporter fluorophore.}, language = {en} } @article{InalKoelschSelrieetal.2013, author = {Inal, Sahika and K{\"o}lsch, Jonas D. and Selrie, Frank and Schenk, J{\"o}rg A. and Wischerhoff, Erik and Laschewsky, Andr{\´e} and Neher, Dieter}, title = {A water soluble fluorescent polymer as a dual colour sensor for temperature and a specific protein}, doi = {10.1039/c3tb21245a}, year = {2013}, abstract = {We present two thermoresponsive water soluble copolymers prepared via free radical statistical copolymerization of N-isopropylacrylamide (NIPAm) and of oligo(ethylene glycol) methacrylates (OEGMAs), respectively, with a solvatochromic 7-(diethylamino)-3-carboxy-coumarin (DEAC)-functionalized monomer. In aqueous solutions, the NIPAm-based copolymer exhibits characteristic changes in its fluorescence profile in response to a change in solution temperature as well as to the presence of a specific protein, namely an anti-DEAC antibody. This polymer emits only weakly at low temperatures, but exhibits a marked fluorescence enhancement accompanied by a change in its emission colour when heated above its cloud point. Such drastic changes in the fluorescence and absorbance spectra are observed also upon injection of the anti-DEAC antibody, attributed to the specific binding of the antibody to DEAC moieties. Importantly, protein binding occurs exclusively when the polymer is in the well hydrated state below the cloud point, enabling a temperature control on the molecular recognition event. On the other hand, heating of the polymer-antibody complexes releases a fraction of the bound antibody. In the presence of the DEAC-functionalized monomer in this mixture, the released antibody competitively binds to the monomer and the antibody-free chains of the polymer undergo a more effective collapse and inter-aggregation. In contrast, the emission properties of the OEGMA-based analogous copolymer are rather insensitive to the thermally induced phase transition or to antibody binding. These opposite behaviours underline the need for a carefully tailored molecular design of responsive polymers aimed at specific applications, such as biosensing.}, language = {en} } @article{JulichGrunerLoewenbergNeffeetal.2013, author = {Julich-Gruner, Konstanze K. and L{\"o}wenberg, Candy and Neffe, Axel T. and Behl, Marc and Lendlein, Andreas}, title = {Recent trends in the chemistry of shape-memory polymers}, series = {Macromolecular chemistry and physics}, volume = {214}, journal = {Macromolecular chemistry and physics}, number = {5}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1022-1352}, doi = {10.1002/macp.201200607}, pages = {527 -- 536}, year = {2013}, abstract = {Shape-memory polymers (SMPs) are stimuli-sensitive materials capable of performing complex movements on demand, which makes them interesting candidates for various applications, for example, in biomedicine or aerospace. This trend article highlights current approaches in the chemistry of SMPs, such as tailored segment chemistry to integrate additional functions and novel synthetic routes toward permanent and temporary netpoints. Multiphase polymer networks and multimaterial systems illustrate that SMPs can be constructed as a modular system of different building blocks and netpoints. Future developments are aiming at multifunctional and multistimuli-sensitive SMPs.}, language = {en} } @article{JungingerKuebelSchacheretal.2013, author = {Junginger, Mathias and K{\"u}bel, Christian and Schacher, Felix H. and M{\"u}ller, Axel H. E. and Taubert, Andreas}, title = {Crystal structure and chemical composition of biomimetric calcium phosphate nanofibers}, doi = {10.1039/c3ra23348k}, year = {2013}, abstract = {Calcium phosphate nanofibers with a diameter of only a few nanometers and a cotton-ball-like aggregate morphology have been reported several times in the literature. Although fiber formation seems reproducible in a variety of conditions, the crystal structure and chemical composition of the fibers have been elusive. Using scanning transmission electron microscopy, low dose electron (nano)diffraction, energy-dispersive X-ray spectroscopy, and energy- filtered transmission electron microscopy, we have assigned crystal structures and chemical compositions to the fibers. Moreover, we demonstrate that the mineralization process yields true polymer/calcium phosphate hybrid materials where the block copolymer template is closely associated with the calcium phosphate.}, language = {en} } @article{JungingerKuebelSchacheretal.2013, author = {Junginger, Mathias and K{\"u}bel, Christian and Schacher, Felix H. and M{\"u}ller, Axel H. E. and Taubert, Andreas}, title = {Crystal structure and chemical composition of biomimetic calcium phosphate nanofibers}, series = {RSC Advances}, volume = {3}, journal = {RSC Advances}, number = {28}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {2046-2069}, doi = {10.1039/c3ra23348k}, pages = {11301 -- 11308}, year = {2013}, abstract = {Calcium phosphate nanofibers with a diameter of only a few nanometers and a cotton-ball-like aggregate morphology have been reported several times in the literature. Although fiber formation seems reproducible in a variety of conditions, the crystal structure and chemical composition of the fibers have been elusive. Using scanning transmission electron microscopy, low dose electron (nano) diffraction, energy-dispersive X-ray spectroscopy, and energy-filtered transmission electron microscopy, we have assigned crystal structures and chemical compositions to the fibers. Moreover, we demonstrate that the mineralization process yields true polymer/calcium phosphate hybrid materials where the block copolymer template is closely associated with the calcium phosphate.}, language = {en} } @article{KellerKopyraGothelfetal.2013, author = {Keller, Adrian and Kopyra, Janina and Gothelf, Kurt V. and Bald, Ilko}, title = {Electron-induced damage of biotin studied in the gas phase and in the condensed phase at a single-molecule level}, series = {New journal of physics : the open-access journal for physics}, volume = {15}, journal = {New journal of physics : the open-access journal for physics}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1367-2630}, doi = {10.1088/1367-2630/15/8/083045}, pages = {14}, year = {2013}, abstract = {Biotin is an essential vitamin that is, on the one hand, relevant for the metabolism, gene expression and in the cellular response to DNA damage and, on the other hand, finds numerous applications in biotechnology. The functionality of biotin is due to two particular sub-structures, the ring structure and the side chain with carboxyl group. The heterocyclic ring structure results in the capability of biotin to form strong intermolecular hydrogen and van der Waals bonds with proteins such as streptavidin, whereas the carboxyl group can be employed to covalently bind biotin to other complex molecules. Dissociative electron attachment (DEA) to biotin results in a decomposition of the ring structure and the carboxyl group, respectively, within resonant features in the energy range 0-12 eV, thereby preventing the capability of biotin for intermolecular binding and covalent coupling to other molecules. Specifically, the fragment anions (M-H)(-), (M-O)(-), C3N2O-, CH2O2-, OCN-, CN-, OH- and O- are observed, and exemplarily the DEA cross section of OCN- formation is determined to be 3 x 10(-19) cm(2). To study the response of biotin to electrons within a complex condensed environment, we use the DNA origami technique and determine a dissociation yield of (1.1 +/- 0.2) x 10(-14) cm(2) at 18 eV electron energy, which represents the most relevant energy for biomolecular damage induced by secondary electrons. The present results thus have important implications for the use of biotin as a label in radiation experiments.}, language = {en} } @article{KeruboMidiwoDereseetal.2013, author = {Kerubo, Leonidah Omosa and Midiwo, Jacob Ogweno and Derese, Solomon and Langat, Moses K. and Akala, Hoseah M. and Waters, Norman C. and Peter, Martin and Heydenreich, Matthias}, title = {Antiplasmodial activity of compounds from the surface exudates of senecio roseiflorus}, series = {Natural product communications : an international journal for communications and reviews}, volume = {8}, journal = {Natural product communications : an international journal for communications and reviews}, number = {2}, publisher = {NPC}, address = {Westerville}, issn = {1934-578X}, pages = {175 -- 176}, year = {2013}, abstract = {From the surface exudates of Senecio roseiflorus fourteen known methylated flavonoids and one phenol were isolated and characterized. The structures of these compounds were determined on the basis of their spectroscopic analysis. The surface exudate and the flavonoids isolated showed moderate to good antiplasmodial activity with 5,4'-dihydroxy-7-dimethoxyflavanone having the highest activity against chloroquine-sensitive (D6) and resistant (W2) strains of Plasmodium falciparum, with IC50 values of 3.2 +/- 0.8 and 4.4 +/- 0.01 mu g/mL respectively.}, language = {en} } @article{KlaperLinker2013, author = {Klaper, Matthias and Linker, Torsten}, title = {Evidence for an oxygen anthracene sandwich complex}, series = {Angewandte Chemie : a journal of the Gesellschaft Deutscher Chemiker ; International edition}, volume = {52}, journal = {Angewandte Chemie : a journal of the Gesellschaft Deutscher Chemiker ; International edition}, number = {45}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1433-7851}, doi = {10.1002/anie.201304768}, pages = {11896 -- 11899}, year = {2013}, language = {en} } @article{KleinpeterKoch2013, author = {Kleinpeter, Erich and Koch, Andreas}, title = {(Anti)aromaticity of dehydroannulenes of various ring size proved by the ring current effect in H-1 NMR spectra}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {5}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2012.12.019}, pages = {1481 -- 1488}, year = {2013}, abstract = {The spatial magnetic properties (Through-Space NMR Shieldings-TSNMRS) of already synthesized dehydro[n]annulenes of various ring size (from C-12 to C-20) have been computed, visualized as Isochemical Shielding Surfaces (ICSS) of various size and direction, and were examined subject to present (anti)aromaticity. For this purpose the thus quantified ring current effect of the macro cycles on proximate protons in proton NMR spectra was employed.}, language = {en} } @article{KleinpeterWernerKoch2013, author = {Kleinpeter, Erich and Werner, Peter and Koch, Andreas}, title = {Push-pull allenes-conjugation, (anti)aromaticity and quantification of the push-pull character}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {11}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2013.01.027}, pages = {2436 -- 2445}, year = {2013}, abstract = {Structures, H-1/C-13 chemical shifts, and pi electron distribution/conjugation of an experimentally available and theoretically completed set of push-pull allenes Acc(2)C=C=CDon(2) (Acc=F, CHO, CF3, C N; Don=t-Bu, OMe, OEt, SMe, SEt, NCH2R) have been computed at the OFT level of theory. Both orthogonal linear and orthogonal bent structures have been obtained. In the latter case the push-pull character could be quantified by the quotient method. The C-13 chemical shift of the central allene carbon atom C-2 and chemical shift differences Delta delta(C-1, C-2) and Delta delta(C-2, C-3) of allene carbon atoms proved to be a quantitative alternative. TSNMRS of ring-closed push-pull allenes have been computed in addition and were employed to identify polar, carbene-like and carbone-like canonical structures of these molecules.}, language = {en} } @article{KlinkuschKlamroth2013, author = {Klinkusch, Stefan and Klamroth, Tillmann}, title = {Simulations of pump-probe exitations of electronic wave packets for a large qusi-rigid molecular system by means of an extension to the time-dependent configuration interaction singles method}, series = {Journal of theoretical and computational chemistry}, volume = {12}, journal = {Journal of theoretical and computational chemistry}, number = {3}, publisher = {World Scientific}, address = {Singapore}, issn = {0219-6336}, doi = {10.1142/S0219633613500053}, pages = {17}, year = {2013}, abstract = {In this paper, we report simulations of laser-driven many-electron dynamics by means of the time-dependent configuration interaction singles (TD-CIS) approach. Photoionization is included by a heuristic model within calculations employing standard Gaussian basis sets. Benzo[g]-N-methyl-quinolinium-7-hydroxylate (BMQ7H) serves as a test system to generate predefined wave packets, i.e. a superposition between the ground and fifth excited state, in a large molecule. For this molecule, these two states have a very similar geometry, which enables us to use the fixed nuclei approximation. Furthermore, this geometric stability would also prevent a dephasing of the electron wave packet due to nuclear dynamics in an experimental realization of our simulations. We also simulate the possible detection of such a wave packet by ultra short probe laser pulses, i.e. pump-probe spectra.}, language = {en} } @article{KramerKleinpeter2013, author = {Kramer, Markus and Kleinpeter, Erich}, title = {A conformational study of N-acetyl glucosamine derivatives utilizing residual dipolar couplings}, issn = {1090-7807}, year = {2013}, language = {en} } @phdthesis{Krannig2013, author = {Krannig, Kai-Steffen}, title = {Smart biohybrid polymers : synthesis and structures of novel glycopolypeptides}, address = {Potsdam}, pages = {165 S.}, year = {2013}, language = {en} } @article{LemkePrietzelKoetz2013, author = {Lemke, Karina and Prietzel, Claudia Christina and Koetz, Joachim}, title = {Fluorescent gold clusters synthesized in a poly(ethyleneimine) modified reverse microemulsion}, series = {Journal of colloid and interface science}, volume = {394}, journal = {Journal of colloid and interface science}, publisher = {Elsevier}, address = {San Diego}, issn = {0021-9797}, doi = {10.1016/j.jcis.2012.11.057}, pages = {141 -- 146}, year = {2013}, abstract = {This paper is focused on the formation of gold clusters in a tailor-made polyelectrolyte-modified reverse microemulsion using poly(ethyleneimine) (PEI) as a cationic polyelectrolyte. PEI incorporated into a ternary w/o microemulsion consisting of water/heptanol/zwitterionic surfactant 3-(N,N-dimethyl-dodecylammonio)-propanesulfonate (SB) acts as a reducing and stabilizing agent and shows an additional template effect. The nanoparticle synthesis is performed by a simple mixing of two microemulsions, one containing the PEI and the other one containing the gold chloride precursor. UV-vis measurements in the microemulsion show two pronounced absorption maxima, one at 360 nm and the other one at 520 nm, indicating two particle fractions. The absorption maximum at 360 nm in combination to the unique fluorescence properties indicate the formation of gold clusters. After a complete solvent evaporation the redispersed nanoparticles have been characterized by using UV-vis and fluorescence spectroscopy, in combination to dynamic light scattering and transmission electron microscopy (TEM). In addition to the gold nanoparticle fraction (>5 nm) the fluorescent gold cluster fraction (<2 nm) can be redispersed without particle aggregation. By means of asymmetric flow field flow fractionation (AF-FFF) two different cluster fractions with particle diameter (<2 nm) can be identified.}, language = {en} } @article{LendleinSauter2013, author = {Lendlein, Andreas and Sauter, Tilman}, title = {Shape-memory effect in polymers}, series = {Macromolecular chemistry and physics}, volume = {214}, journal = {Macromolecular chemistry and physics}, number = {11}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1022-1352}, doi = {10.1002/macp.201300098}, pages = {1175 -- 1177}, year = {2013}, language = {en} } @article{LiBabuTurneretal.2013, author = {Li, Hongguang and Babu, Sukumaran Santhosh and Turner, Sarah T. and Neher, Dieter and Hollamby, Martin J. and Tomohito, Seki and Yagai, Shiki and deguchi, Yonekazu and M{\"o}hwald, Helmuth and Nakanishi, Takashi}, title = {Alkylated-C60 based soft materials: regulation of self-assembly and optoelectronic properties by chain branching}, doi = {10.1039/C3TC00066D}, year = {2013}, abstract = {Derivatization of fullerene (C60) with branched aliphatic chains softens C60-based materials and enables the formation of thermotropic liquid crystals and room temperature nonvolatile liquids. This work demonstrates that by carefully tuning parameters such as type, number and substituent position of the branched chains, liquid crystalline C60 materials with mesophase temperatures suited for photovoltaic cell fabrication and room temperature nonvolatile liquid fullerenes with tunable viscosity can be obtained. In particular, compound 1, with branched chains, exhibits a smectic liquid crystalline phase extending from 84°C to room temperature. Analysis of bulk heterojunction (BHJ) organic solar cells with a ca. 100 nm active layer of compound 1 and poly(3-hexylthiophene) (P3HT) as an electron acceptor and an electron donor, respectively, reveals an improved performance (power conversion efficiency, PCE: 1.6 {\~n} 0.1\%) in comparison with another compound, 10 (PCE: 0.5 {\~n} 0.1\%). The latter, in contrast to 1, carries linear aliphatic chains and thus forms a highly ordered solid lamellar phase at room temperature. The solar cell performance of 1 blended with P3HT approaches that of PCBM/P3HT for the same active layer thickness. This indicates that C60 derivatives bearing branched tails are a promising class of electron acceptors in soft (flexible) photovoltaic devices.}, language = {en} } @article{LinkerBramborgKellingetal.2013, author = {Linker, Torsten and Bramborg, Andrea and Kelling, Alexandra and Schilde, Uwe}, title = {Crystal structure of trans-1,4-di-(2-(allyloxyethyl)-cyclohexa-2,5-diene-1,4-dicarboxylic acid, C18H24O6}, series = {Zeitschrift f{\"u}r Kristallographie : international journal for structural, physical and chemical aspects of crystalline materials ; New crystal structures}, volume = {228}, journal = {Zeitschrift f{\"u}r Kristallographie : international journal for structural, physical and chemical aspects of crystalline materials ; New crystal structures}, number = {2}, publisher = {De Gruyter Oldenbourg}, address = {M{\"u}nchen}, issn = {1433-7266}, doi = {10.1524/ncrs.2013.0124}, pages = {243 -- 244}, year = {2013}, abstract = {C18H24O6, triclinic, P (1) over bar (no. 2), a = 5.726(1) angstrom, b = 8.845(2) angstrom, c = 9.557(2) angstrom, alpha = 105.27(1)degrees, beta = 102.76(1)degrees, gamma = 103.49(1)degrees, V = 433.0 angstrom(3), Z = 1, R-gt(F) = 0.0412, wR(ref)(F-2) = 0.1075, T = 210 K.}, language = {en} } @article{LinkerFudickarKellingetal.2013, author = {Linker, Torsten and Fudickar, Werner and Kelling, Alexandra and Schilde, Uwe}, title = {Crystal structure of dimethyl 1,4-dioxaspiro[4,5]dec-6-ene-(8R)-[(3,5-dinitrobenzoyl)oxa]-(2R,3R)-dica rboxylate, C19H18N2O12}, series = {Zeitschrift f{\"u}r Kristallographie : international journal for structural, physical and chemical aspects of crystalline materials ; New crystal structures}, volume = {228}, journal = {Zeitschrift f{\"u}r Kristallographie : international journal for structural, physical and chemical aspects of crystalline materials ; New crystal structures}, number = {2}, publisher = {De Gruyter Oldenbourg}, address = {M{\"u}nchen}, issn = {1433-7266}, doi = {10.1524/ncrs.2013.0123}, pages = {241 -- 242}, year = {2013}, abstract = {C19H18N2O12, orthorhombic, P2(1)2(1)2(1) (no. 19), a = 6.2472(6) angstrom, b = 17.576(2) angstrom, c = 18.848(3) angstrom, V = 2069.6 angstrom(3), Z = 4, R-gt(F) = 0.0393, wR(ref)(F-2) = 0.0694, T = 210 K.}, language = {en} } @article{MarsatStahlhutLaschewskyetal.2013, author = {Marsat, Jean-Noel and Stahlhut, Frank and Laschewsky, Andr{\´e} and von Berlepsch, Hans and B{\"o}ttcher, Christoph}, title = {Multicompartment micelles from silicone-based triphilic block copolymers}, series = {Colloid and polymer science : official journal of the Kolloid-Gesellschaft}, volume = {291}, journal = {Colloid and polymer science : official journal of the Kolloid-Gesellschaft}, number = {11}, publisher = {Springer}, address = {New York}, issn = {0303-402X}, doi = {10.1007/s00396-013-3001-2}, pages = {2561 -- 2567}, year = {2013}, abstract = {An amphiphilic linear ternary block copolymer was synthesised in three consecutive steps via reversible addition-fragmentation chain transfer polymerisation. Oligo(ethylene glycol) monomethyl ether acrylate was engaged as a hydrophilic building block, while benzyl acrylate and 3-tris(trimethylsiloxy)silyl propyl acrylate served as hydrophobic building blocks. The resulting "triphilic" copolymer consists thus of a hydrophilic (A) and two mutually incompatible "soft" hydrophobic blocks, namely, a lipophilic (B) and a silicone-based (C) block, with all blocks having glass transition temperatures well below 0 A degrees C. The triphilic copolymer self-assembles into spherical multicompartment micellar aggregates in aqueous solution, where the two hydrophobic blocks undergo local phase separation into various ultrastructures as evidenced by cryogenic transmission electron microscopy. Thus, a silicone-based polymer block can replace the hitherto typically employed fluorocarbon-based hydrophobic blocks in triphilic block copolymers for inducing multicompartmentalisation.}, language = {en} } @article{MenSiebenbuergerQiuetal.2013, author = {Men, Yongiun and Siebenb{\"u}rger, Miriam and Qiu, Xunlin and Antonietti, Markus and Yuan, Jiayin}, title = {Low fractions of ionic liquid or poly(ionic liquid) can activate polysaccaride biomass into shaped, flexible and fire-retardant porous carbons}, doi = {10.1039/c3ta12302b}, year = {2013}, abstract = {Sugar-based molecules and polysaccharide biomass can be turned into porous functional carbonaceous products at comparably low temperatures of 400 °C under a nitrogen atmosphere in the presence of an ionic liquid (IL) or a poly(ionic liquid) (PIL). The IL and PIL act as "activation agents" with own structural contribution, and effectively promote the conversion and pore generation in the biomaterials even at a rather low doping ratio (7 wt\%). In addition, this "induced carbonization" and pore forming phenomenon enables the preservation of the biotemplate shape to the highest extent and was employed to fabricate shaped porous carbonaceous materials from carbohydrate-based biotemplates, exemplified here with cellulose filter membranes, coffee filter paper and natural cotton. These carbonized hybrids exhibit comparably good mechanical properties, such as bendability of membranes or shape recovery of foams. Moreover, the nitrogen atoms incorporated in the final products from the IL/PIL precursors further improve the oxidation stability in the fire-retardant tests.}, language = {en} } @phdthesis{Men2013, author = {Men, Yongjun}, title = {Poly(Ionic Liquid)-based thermoresponsive polymers and porous carbon materials}, address = {Potsdam}, pages = {101 S.}, year = {2013}, language = {en} } @article{MenSiebenbuergerQiuetal.2013, author = {Men, Yongjun and Siebenb{\"u}rger, Miriam and Qiu, Xunlin and Antonietti, Markus and Yuan, Jiayin}, title = {Low fractions of ionic liquid or poly(ionic liquid) can activate polysaccharide biomass into shaped, flexible and fire-retardant porous carbons}, series = {Journal of materials chemistry : A, Materials for energy and sustainability}, volume = {1}, journal = {Journal of materials chemistry : A, Materials for energy and sustainability}, number = {38}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {2050-7488}, doi = {10.1039/c3ta12302b}, pages = {11887 -- 11893}, year = {2013}, abstract = {Sugar-based molecules and polysaccharide biomass can be turned into porous functional carbonaceous products at comparably low temperatures of 400 degrees C under a nitrogen atmosphere in the presence of an ionic liquid (IL) or a poly(ionic liquid) (PIL). The IL and PIL act as "activation agents" with own structural contribution, and effectively promote the conversion and pore generation in the biomaterials even at a rather low doping ratio (7 wt\%). In addition, this "induced carbonization" and pore forming phenomenon enables the preservation of the biotemplate shape to the highest extent and was employed to fabricate shaped porous carbonaceous materials from carbohydrate-based biotemplates, exemplified here with cellulose filter membranes, coffee filter paper and natural cotton. These carbonized hybrids exhibit comparably good mechanical properties, such as bendability of membranes or shape recovery of foams. Moreover, the nitrogen atoms incorporated in the final products from the IL/PIL precursors further improve the oxidation stability in the fire-retardant tests.}, language = {en} } @article{MiasnikovaBenitezMontoyaLaschewsky2013, author = {Miasnikova, Anna and Benitez-Montoya, Carlos Adrian and Laschewsky, Andr{\´e}}, title = {Counterintuitive photomodulation of the thermal phase transition of poly(methoxy diethylene glycol acrylate) in aqueous solution by trans-cis isomerization of Copolymerized Azobenzenes}, series = {Macromolecular chemistry and physics}, volume = {214}, journal = {Macromolecular chemistry and physics}, number = {13}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1022-1352}, doi = {10.1002/macp.201300203}, pages = {1504 -- 1514}, year = {2013}, abstract = {The non-ionic monomer (methoxy diethylene glycol) acrylate is copolymerized with its azodye-functionalized acrylate analogue using reversible addition-fragmentation chain transfer (RAFT) polymerization. Copolymerization is increasingly difficult with increasing amounts of the azo-dye-bearing monomer. The resulting water-soluble polymers are thermosensitive, exhibiting lower critical solution temperature (LCST) behavior, which can be modulated by the photoinduced trans-cis isomerization of the dye. While already small contents of the hydrophobic azobenzene group reduce the phase-transition temperatures of the copolymers strongly, photoisomerization of the apolar trans-state to the more-polar cis-state has only a small effect, and decreases rather than increases the cloud points.}, language = {en} } @phdthesis{MirskovaAdamovichMirskovetal.2013, author = {Mirskova, Anna N. and Adamovich, Sergey N. and Mirskov, Rudolf G. and Schilde, Uwe}, title = {Reaction of pharmacological active tris-(2-hydroxyethyl) ammonium 4-chlorophenylsulfanylacetate with ZnCl2 or NiCl2: first conversion of a protic ionic liquid into metallated ionic liquid}, doi = {10.1186/1752-153X-7-34}, year = {2013}, language = {en} } @article{MitznerRehanekKernetal.2013, author = {Mitzner, Rolf and Rehanek, Jens and Kern, Jan and Gul, Sheraz and Hattne, Johan and Taguchi, Taketo and Alonso-Mori, Roberto and Tran, Rosalie and Weniger, Christian and Schr{\"o}der, Henning and Quevedo, Wilson and Laksmono, Hartawan and Sierra, Raymond G. and Han, Guangye and Lassalle-Kaiser, Benedikt and Koroidov, Sergey and Kubicek, Katharina and Schreck, Simon and Kunnus, Kristjan and Brzhezinskaya, Maria and Firsov, Alexander and Minitti, Michael P. and Turner, Joshua J. and M{\"o}ller, Stefan and Sauter, Nicholas K. and Bogan, Michael J. and Nordlund, Dennis and Schlotter, William F. and Messinger, Johannes and Borovik, Andrew S. and Techert, Simone and de Groot, Frank M. F. and F{\"o}hlisch, Alexander and Erko, Alexei and Bergmann, Uwe and Yachandra, Vittal K. and Wernet, Philippe and Yano, Junko}, title = {L-edge x-ray absorption spectroscopy of dilute systems relevant to metalloproteins using an X-ray free-electron laser}, series = {The journal of physical chemistry letters}, volume = {4}, journal = {The journal of physical chemistry letters}, number = {21}, publisher = {American Chemical Society}, address = {Washington}, issn = {1948-7185}, doi = {10.1021/jz401837f}, pages = {3641 -- 3647}, year = {2013}, abstract = {L-edge spectroscopy of 3d transition metals provides important electronic structure information and has been used in many fields. However, the use of this method for studying dilute aqueous systems, such as metalloenzymes, has not been prevalent because of severe radiation damage and the lack of suitable detection systems. Here we present spectra from a dilute Mn aqueous solution using a high-transmission zone-plate spectrometer at the Linac Coherent Light Source (LCLS). The spectrometer has been optimized for discriminating the Mn L-edge signal from the overwhelming 0 K-edge background that arises from water and protein itself, and the ultrashort LCLS X-ray pulses can outrun X-ray induced damage. We show that the deviations of the partial-fluorescence yield-detected spectra from the true absorption can be well modeled using the state-dependence of the fluorescence yield, and discuss implications for the application of our concept to biological samples.}, language = {en} } @article{MondalBhuniaBaburinetal.2013, author = {Mondal, Suvendu Sekhar and Bhunia, Asamanjoy and Baburin, Igor A. and J{\"a}ger, Christian and Kelling, Alexandra and Schilde, Uwe and Seifert, Gotthard and Janiak, Christoph and Holdt, Hans-J{\"u}rgen}, title = {Gate effects in a hexagonal zinc-imidazolate-4-amide-5-imidate framework with flexible methoxy substituents and CO2 selectivity}, series = {Chemical communications}, volume = {49}, journal = {Chemical communications}, number = {69}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1359-7345}, doi = {10.1039/c3cc42156b}, pages = {7599 -- 7601}, year = {2013}, abstract = {A new imidazolate-4-amide-5-imidate based MOF, IFP-7, is generated, having flexible methoxy groups, which act as molecular gates for guest molecules. This allows highly selective CO2 sorption over N-2 and CH4 gases.}, language = {en} } @article{MondalDeyBaburinetal.2013, author = {Mondal, Suvendu Sekhar and Dey, Subarna and Baburin, Igor A. and Kelling, Alexandra and Schilde, Uwe and Seifert, Gotthard and Janiak, Christoph and Holdt, Hans-J{\"u}rgen}, title = {Syntheses of two imidazolate-4-amide-5-imidate linker-based hexagonal metal-organic frameworks with flexible ethoxy substituent}, series = {CrystEngComm}, volume = {15}, journal = {CrystEngComm}, number = {45}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1466-8033}, doi = {10.1039/c3ce41632a}, pages = {9394 -- 9399}, year = {2013}, abstract = {A rare example of in situ linker generation with the formation of soft porous Zn- and Co-MOFs (IFP-9 and -10, respectively) is reported. The flexible ethoxy groups of IFP-9 and -10 protrude into the 1D hexagonal channels. The gas-sorption behavior of both materials for H-2, CO2 and CH4 showed wide hysteretic isotherms, typical for MOFs having a flexible substituent which can give rise to a gate effect.}, language = {en} } @article{MoskalikShainyanAstakhovaetal.2013, author = {Moskalik, Mikhail Yu and Shainyan, Bagrat A. and Astakhova, Vera V. and Schilde, Uwe}, title = {Oxidative addition of trifluoromethanesulfonamide to cycloalkadienes}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {2}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2012.10.099}, pages = {705 -- 711}, year = {2013}, abstract = {In the oxidative system (t-BuOCl+NaI) trifluoromethanesulfonamide is regio- and stereoselectively added to only one double bond of cyclopentadiene and 1,3-cyclohexadiene giving rise to 1,1,1-trifluoro-N-(5-iodocyclopent-2-en-1-yl)methanesulfonamide 7 and trans-N,N'-cyclohex-3-en-1,2-diylbis(1,1,1-trifluoromethanesulfonamide) 8. The structure of 7 and 8 was determined by X-ray, NMR, and MS. With 1,4-cyclohexadiene, addition to both double bonds occurs with the formation of N,N'-(4-chloro-5-iodocyclohexan-1,2-diyl)bis(1,1,1-trifluoromethanesulfonamide) 9. Under the action of sodium iodide in acetone, the latter product undergoes halogenophilic attack with the reduction of the CHI group and elimination of HCl to give trans-N,N'-cyclohex-4-en-1,2-diylbis(1,1,1-trifluoromethanesulfonamide) 10, whose structure was also determined by X-ray analysis. 1,3,5-Cycloheptatriene under these conditions is oxidized to benzaldehyde and does not react with trifluoromethanesulfonamide.}, language = {en} } @article{MutaiHeydenreichThoithietal.2013, author = {Mutai, Peggoty and Heydenreich, Matthias and Thoithi, Grace and Mugumbate, Grace and Chibale, Kelly and Yenesew, Abiy}, title = {3-Hydroxyisoflavanones from the stem bark of dalbergia melanoxylon - isolation, antimycobacterial evaluation and molecular docking studies}, series = {Phytochemistry letters}, volume = {6}, journal = {Phytochemistry letters}, number = {4}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1874-3900}, doi = {10.1016/j.phytol.2013.08.018}, pages = {671 -- 675}, year = {2013}, abstract = {Two new 3-hydroxyisoflavanones, (S)-3,4',5-trihydroxy-2',7-dimethoxy-3'-prenylisoflavanone (trivial name kenusanone F 7-methyl ether) and (S)-3,5-dihydroxy-2',7-dimethoxy-2 '',2 ''-dimethylpyrano[5 '',6 '':3',4']isoflavanone (trivial name sophoronol-7-methyl ether) along with two known compounds (dalbergin and formononetin) were isolated from the stem bark of Dalbergia melanoxylon. The structures were elucidated using spectroscopic techniques. Kenusanone F 7-methyl ether showed activity against Mycobacterium tuberculosis, whereas both of the new compounds were inactive against the malaria parasite Plasmodium falciparum at 10 mu g/ml. Docking studies showed that the new compounds kenusanone F 7-methyl ether and sophoronol-7-methyl ether have high affinity for the M. tuberculosis drug target INHA.}, language = {en} } @article{NeffevonRuestenLangeBrauneetal.2013, author = {Neffe, Axel T. and von R{\"u}sten-Lange, Maik and Braune, Steffen and L{\"u}tzow, Karola and Roch, Toralf and Richau, Klaus and Jung, Friedrich and Lendlein, Andreas}, title = {Poly(ethylene glycol) grafting to Poly(ether imide) membranes - influence on protein adsorption and Thrombocyte adhesion}, series = {Macromolecular bioscience}, volume = {13}, journal = {Macromolecular bioscience}, number = {12}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1616-5187}, doi = {10.1002/mabi.201300309}, pages = {1720 -- 1729}, year = {2013}, abstract = {The chain length and end groups of linear PEG grafted on smooth surfaces is known to influence protein adsorption and thrombocyte adhesion. Here, it is explored whether established structure function relationships can be transferred to application relevant, rough surfaces. Functionalization of poly(ether imide) (PEI) membranes by grafting with monoamino PEG of different chain lengths (M-n=1kDa or 10kDa) and end groups (methoxy or hydroxyl) is proven by spectroscopy, changes of surface hydrophilicity, and surface shielding effects. The surface functionalization does lead to reduction of adsorption of BSA, but not of fibrinogen. The thrombocyte adhesion is increased compared to untreated PEI surfaces. Conclusively, rough instead of smooth polymer or gold surfaces should be investigated as relevant models.}, language = {en} } @article{NestLudwigUlusoyetal.2013, author = {Nest, Mathias and Ludwig, M. and Ulusoy, I. and Klamroth, Tillmann and Saalfrank, Peter}, title = {Electron correlation dynamics in atoms and molecules}, series = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, volume = {138}, journal = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, number = {16}, publisher = {American Institute of Physics}, address = {Melville}, issn = {0021-9606}, doi = {10.1063/1.4801867}, pages = {6}, year = {2013}, abstract = {In this paper, we present quantum dynamical calculations on electron correlation dynamics in atoms and molecules using explicitly time-dependent ab initio configuration interaction theory. The goals are (i) to show that in which cases it is possible to switch off the electronic correlation by ultrashort laser pulses, and (ii) to understand the temporal evolution and the time scale on which it reappears. We characterize the appearance of correlation through electron-electron scattering when starting from an uncorrelated state, and we identify pathways for the preparation of a Hartree-Fock state from the correlated, true ground state. Exemplary results for noble gases, alkaline earth elements, and selected molecules are provided. For Mg we show that the uncorrelated state can be prepared using a shaped ultrashort laser pulse.}, language = {en} } @article{NeuvonenNeuvonenKochetal.2013, author = {Neuvonen, Kari and Neuvonen, Helmi and Koch, Andreas and Kleinpeter, Erich}, title = {Nature of the steric Omega(S), E-R and E-S ' substituent constants - comparison with the aid of NBO and STERIC analysis}, series = {Computational and theoretical chemistry}, volume = {1015}, journal = {Computational and theoretical chemistry}, number = {4}, publisher = {Elsevier}, address = {Amsterdam}, issn = {2210-271X}, doi = {10.1016/j.comptc.2013.03.025}, pages = {34 -- 43}, year = {2013}, abstract = {The nature of the major steric substituent constant scales for alkyl substituents, i.e. Omega(S), E-R and E-S' scales, was studied with the aid of the NBO and the natural steric (STERIC) analyses. Cyclohexyl esters R-3-CCOOC6H11 (R = alkyl or H) were used as the model compounds. Special emphasis was laid on the potential contribution of the polar component in these steric substituent parameters. In the light of our model the Omega(S) scale seems to be dominantly a steric substituent constant scale as is seen on the strengths of the good correlation between the Omega(S) constants of the CR3 group and the total steric exchange energy values E-TSEE for the model compounds. However, the Omega(S) values also seem to include a minor electronic component due to the varying electrostatic effect via the C alpha atom. On the other hand, E-R and E-S' parameters largely hinge on the size dependent polar effect of the CR3 alkyl group. By way of our model this repulsive interaction can be quantified by descriptor Delta q(OCO), the natural charge difference q(C)(C=O) - Sigma qO for the O-C(=O) functional group. Delta q(OCO) depends on the E-TSEE values, on qC alpha and on the polarization coefficients of the oxygen hybrid in the NBO of the pi(C=O) bond. The size sensitivity of the kinetic E-S' constants can be connected to variation of the Burgi-Dunitz angle in the transition state for the standard reaction used. A comparison is made for the q(C)(C=O) or Delta q(OCO) values computed on the one hand with the NBO formalism and on the other hand with the Hirshfeld formalism. A practical novel substituent constant q(C)(C=O) for the size of the alkyl groups is introduced.}, language = {en} } @article{OfomajaUnuabonah2013, author = {Ofomaja, Augustine Enakpodia and Unuabonah, Emmanuel Iyayi}, title = {Kinetics and time-dependent Langmuir modeling of 4-nitrophenol adsorption onto Mansonia sawdust}, series = {Journal of the Taiwan Institute of Chemical Engineers}, volume = {44}, journal = {Journal of the Taiwan Institute of Chemical Engineers}, number = {4}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1876-1070}, doi = {10.1016/j.jtice.2012.12.021}, pages = {566 -- 576}, year = {2013}, abstract = {Often time's adsorption of large molecules onto untreated lignocellulosic materials is viewed as a two stage process and has frequently been characterized only by kinetic models while the rate limiting step of adsorption is determined only at various stages of the adsorption process. In this study the kinetics and the contribution of diffusion processes to 4-nitrophenol adsorption onto untreated sawdust was examined and the overall rate limiting step evaluated. The adsorption profile showed an initial rapid uptake of 4-nitrophenol which decreased and became almost constant after 5 min of contact. Analysis of the adsorption profile with the intraparticle diffusion equation and fractional 4-nitrophenol uptake with time showed that the profile can be divided into three different stages. The rate determining step of 4-nitrophenol adsorption was then evaluated based on the activation energies of each processes along with their activation parameters (Delta G*, Delta H* and Delta S*). The results revealed that external mass transfer was the overall rate limiting step with activation parameters E-a = 21.11, Delta H* = 23.75 and Delta S* = 144.97. Time dependent Langmuir modeling was carried out to optimize process parameters. (c) 2013 Taiwan Institute of Chemical Engineers. Published by Elsevier B.V. All rights reserved.}, language = {en} } @article{PrinzSchreiberOlejkoetal.2013, author = {Prinz, Julia and Schreiber, Benjamin and Olejko, Lydia and Oertel, Jana and Rackwitz, Jenny and Keller, Adrian and Bald, Ilko}, title = {DNA origami substrates for highly sensitive surface-enhanced raman scattering}, series = {The journal of physical chemistry letters}, volume = {4}, journal = {The journal of physical chemistry letters}, number = {23}, publisher = {American Chemical Society}, address = {Washington}, issn = {1948-7185}, doi = {10.1021/jz402076b}, pages = {4140 -- 4145}, year = {2013}, abstract = {DNA nanotechnology holds great promise for the fabrication of novel plasmonic nanostructures and the potential to carry out single-molecule measurements using optical spectroscopy. Here, we demonstrate for the first time that DNA origami nanostructures can be exploited as substrates for surface-enhanced Raman scattering (SERS). Gold nanoparticles (AuNPs) have been arranged into dimers to create intense Raman scattering hot spots in the interparticle gaps. AuNPs (15 nm) covered with TAMRA-modified DNA have been placed at a nominal distance of 25 nm to demonstrate the formation of Raman hot spots. To control the plasmonic coupling between the nanoparticles and thus the field enhancement in the hot spot, the size of AuNPs has been varied from 5 to 28 nm by electroless Au deposition. By the precise positioning of a specific number of TAMRA molecules in these hot spots, SERS with the highest sensitivity down to the few-molecule level is obtained.}, language = {en} } @article{RasovicKochKleinpeteretal.2013, author = {Rasovic, Aleksandar and Koch, Andreas and Kleinpeter, Erich and Markovic, Rade}, title = {Studies of the regioselective ring-opening closing mode of functionally different thiazolidine type enaminones - en route to the synthesis of trithiaazapentalene derivatives}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {51}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2013.10.088}, pages = {10849 -- 10857}, year = {2013}, abstract = {Trithiaazapentalene derivatives were prepared by the reaction of 2-alkylidene-4-oxothiazolidines with Lawesson's reagent. They are classified as two structurally different trithiaazapentalene compounds that have different contributions of monocyclic 1,2-dithiole and 1,2,4-dithiazole structures and degrees of aromaticity of the bicyclic trithiaazapentalene system. The electron-donating ability of substituents at the C(5) position of the trithiaazapentalene system is recognized as the main cause for changes in pi-Celectron distribution. This is the first complete study of substituent effects on the structure of trithiapentalenes. (C) 2013 Elsevier Ltd. All rights reserved.}, language = {en} } @article{RiebeLaudienBrendleretal.2013, author = {Riebe, Daniel and Laudien, Robert and Brendler, Christian and Beitz, Toralf and L{\"o}hmannsr{\"o}ben, Hans-Gerd}, title = {Laser ionization of H2S and ion-molecule reactions of H3S+ in laser-based ion mobility spectrometry and drift cell time-of-flight mass spectrometry}, series = {Analytical \& bioanalytical chemistry}, volume = {405}, journal = {Analytical \& bioanalytical chemistry}, number = {22}, publisher = {Springer}, address = {Heidelberg}, issn = {1618-2642}, doi = {10.1007/s00216-013-7186-5}, pages = {7031 -- 7039}, year = {2013}, abstract = {The detection of hydrogen sulfide (H2S) by 2 + 1 resonance-enhanced multi-photon ionization (REMPI) and the application of H2S as a laser dopant for the detection of polar compounds in laser ion mobility (IM) spectrometry at atmospheric pressure were investigated. Underlying ionization mechanisms were elucidated by additional studies employing a drift cell interfaced to a time-of-flight mass spectrometer. Depending on the pressure, the primary ions H2S+, HS+, S+, and secondary ions, such as H3S+, were observed. The 2 + 1 REMPI spectrum of H2S near lambda = 302.5 nm was recorded at atmospheric pressure. Furthermore, the limit of detection and the linear range were established. In the second part of the work, H2S was investigated as an H2O analogous laser dopant for the ionization of polar substances by proton transfer. H2S exhibits a proton affinity (PA) similar to that of H2O, but a significantly lower ionization energy facilitating laser ionization. Ion-molecule reactions (IMR) of H3S+ with a variety of polar substances with PA between 754.6 and 841.6 kJ/mol were investigated. Representatives of different compound classes, including alcohols, ketones, esters, and nitroaromatics were analyzed. The IM spectra resulting from IMR of H3S+ and H3O+ with these substances are similar in structure, i.e., protonated monomer and dimer ion peaks are found depending on the analyte concentration.}, language = {en} } @phdthesis{Rohrmann2013, author = {Rohrmann, Johannes}, title = {The transcription factors orchestra of ripening tomato fruits}, address = {Potsdam}, pages = {Ix, 136 S. + 1 CD-Rom}, year = {2013}, language = {en} } @article{RojasTierschRabeetal.2013, author = {Rojas, Oscar and Tiersch, Brigitte and Rabe, Christian and Stehle, Ralf and Hoell, Armin and Arlt, Bastian and Koetz, Joachim}, title = {Nonaqueous Microemulsions Based on N,N '-Alkylimidazolium Alkylsulfate Ionic Liquids}, series = {Langmuir}, volume = {29}, journal = {Langmuir}, number = {23}, publisher = {American Chemical Society}, address = {Washington}, issn = {0743-7463}, doi = {10.1021/la401080q}, pages = {6833 -- 6839}, year = {2013}, abstract = {The ternary system composed of the ionic liquid surfactant (IL-S) 1-butyl-3-methylimidazolium dodecylsulfate ([Bmim][DodSO(4)]), the room temperature ionic liquid (RTIL) 1-ethyl-3-methylimidazolium ethylsulfate ([Emim][EtSO4]), and toluene has been investigated. Three major mechanisms guiding the structure of the isotropic phase were identified by means of conductometric experiments, which have been correlated to the presence of oil-in-IL, bicontinuous, and IL-in-oil microemulsions. IL-S forms micelles in toluene, which swell by adding RTIL as to be shown by dynamic light scattering (DLS) and small-angle X-ray scattering (SAXS) experiments. Therefore, it is possible to form water free IL-in-oil reverse microemulsions <= 10 nm in size as a new type of nanoreactor.}, language = {en} } @article{SarauliXuDietzeletal.2013, author = {Sarauli, David and Xu, Chenggang and Dietzel, Birgit and Schulz, Burkhard and Lisdat, Fred}, title = {Differently substituted sulfonated polyanilines - the role of polymer compositions in electron transfer with pyrroloquinoline quinone-dependent glucose dehydrogenase}, series = {Acta biomaterialia}, volume = {9}, journal = {Acta biomaterialia}, number = {9}, publisher = {Elsevier}, address = {Oxford}, issn = {1742-7061}, doi = {10.1016/j.actbio.2013.06.008}, pages = {8290 -- 8298}, year = {2013}, abstract = {Sulfonated polyanilines have become promising building blocks in the construction of biosensors, and therefore we use here differently substituted polymer forms to investigate the role of their structural composition and properties in achieving a direct electron transfer with the redox enzyme pyrroloquinoline quinone-dependent glucose dehydrogenase (PQQ-GDH). To this end, new copolymers containing different ratios of 2-methoxyaniline-5-sulfonic acid (MAS), 3-aminobenzenesulfonic acid (ABS) and 3-aminobenzoic acid (AB) units have been chemically synthesized. All polymers have been studied with respect to their ability to react directly with PQQ-GDH. This interaction has been monitored initially in solution, and subsequently on electrode surfaces. The results show that only copolymers with MAS and aniline units can directly react with PQQ-GDH in solution; the background can be mainly ascribed to the emeraldine salt redox state of the polymer, allowing rather easy reduction. However, when polymers and the enzyme are immobilized on the surface of carbon nanotube-containing electrodes, direct bioelectrocatalysis is also feasible in the case of copolymers composed of ABS/AB and MAS/AB units, existing initially in pernigraniline base form. This verifies that a productive interaction of the enzyme with differently substituted polymers is feasible when the electrode potential can be used to drive the reaction towards the oxidation of the substrate-reduced enzyme. These results clearly demonstrate that enzyme electrodes based on sulfonated polyanilines and direct bioelectrocatalysis can be successfully constructed.}, language = {en} } @article{SchmidtBerger2013, author = {Schmidt, Bernd and Berger, Ren{\´e}}, title = {A deacetylation-diazotation-coupling sequence - palladium-catalyzed CC bond formation with acetanilides as formal leaving groups}, series = {Advanced synthesis \& catalysis}, volume = {355}, journal = {Advanced synthesis \& catalysis}, number = {2-3}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1615-4150}, doi = {10.1002/adsc.201200929}, pages = {463 -- 476}, year = {2013}, abstract = {Acetanilides can be deacetylated and diazotized in situ, and subsequently used in Pd-catalyzed coupling reactions without isolation of the diazonium intermediate. Heck reactions, Suzuki cross-coupling reactions, and a Pd-catalyzed [2+2+1]cycloaddition have been investigated as terminating CC bond-forming steps of this one-flask sequence. The sequence does not require the exchange of solvents or removal of by-products between the individual steps, but proceeds by addition of reagents and catalysts in due course.}, language = {en} } @article{SchmidtElizarovBergeretal.2013, author = {Schmidt, Bernd and Elizarov, Nelli and Berger, Ren{\´e} and Hoelter, Frank}, title = {Scope and limitations of the Heck-Matsuda-coupling of phenol diazonium salts and styrenes a protecting-group economic synthesis of phenolic stilbenes}, series = {Organic \& biomolecular chemistry : an international journal of synthetic, physical and biomolecular organic chemistry}, volume = {11}, journal = {Organic \& biomolecular chemistry : an international journal of synthetic, physical and biomolecular organic chemistry}, number = {22}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1477-0520}, doi = {10.1039/c3ob40420j}, pages = {3674 -- 3691}, year = {2013}, abstract = {4-Phenol diazonium salts undergo Pd-catalyzed Heck reactions with various styrenes to 4'-hydroxy stilbenes. In almost all cases higher yields and fewer side products were observed, compared to the analogous 4-methoxy benzene diazonium salts. In contrast, the reaction fails completely with 2- and 3-phenol diazonium salts. For these substitution patterns the methoxy-substituted derivatives are superior.}, language = {en} } @article{SchmidtElizarovBergeretal.2013, author = {Schmidt, Bernd and Elizarov, Nelli and Berger, Ren{\´e} and Petersen, Monib H.}, title = {From paracetamol to rolipram and derivatives - application of deacetylation-diazotation sequences and palladium-catalyzed matsuda-heck reaction}, series = {Synthesis}, volume = {45}, journal = {Synthesis}, number = {9}, publisher = {Thieme}, address = {Stuttgart}, issn = {0039-7881}, doi = {10.1055/s-0032-1316874}, pages = {1174 -- 1180}, year = {2013}, abstract = {A six-step synthesis of the antidepressant rolipram from the popular analgetic 4-acetamidophenol (paracetamol) is described. The steps include oxidative functionalization of the aromatic core, diazonium salt formation via deacetylation-diazotation, Matsuda-Heck reaction, conjugate addition of nitromethane, and hydrogenative cyclization.}, language = {en} } @article{SchmidtHauke2013, author = {Schmidt, Bernd and Hauke, Sylvia}, title = {Cross metathesis of allyl alcohols how to suppress and how to promote double bond isomerization}, series = {Organic \& biomolecular chemistry : an international journal of synthetic, physical and biomolecular organic chemistry}, volume = {11}, journal = {Organic \& biomolecular chemistry : an international journal of synthetic, physical and biomolecular organic chemistry}, number = {25}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1477-0520}, doi = {10.1039/c3ob40167g}, pages = {4194 -- 4206}, year = {2013}, abstract = {Under standard conditions the cross metathesis of allyl alcohols and methyl acrylate is accompanied by the formation of ketones, resulting from uncontrolled and undesired double bond isomerization. By conducting the CM in the presence of phenol, the catalyst loading and the reaction time required for quantiative conversion can be reduced, and isomerization can be suppressed. On the other hand, consecutive isomerization can be deliberately promoted by evaporating excess methyl acrylate after completing cross metathesis and by adding a base or silane as chemical triggers.}, language = {en} } @article{SchmidtKrehlHauke2013, author = {Schmidt, Bernd and Krehl, Stefan and Hauke, Sylvia}, title = {Assisted tandem catalytic cross metathesis-oxidation in one flask from styrenes to 1,2-Diketones and further to quinoxalines}, series = {The journal of organic chemistry}, volume = {78}, journal = {The journal of organic chemistry}, number = {11}, publisher = {American Chemical Society}, address = {Washington}, issn = {0022-3263}, doi = {10.1021/jo4005684}, pages = {5427 -- 5435}, year = {2013}, abstract = {1,2-Diketones were synthesized from styrenes by combining a cross metathesis and a Ru-catalyzed alkene oxidation to an assisted tandem catalytic sequence. The synthesis relies on the use of just one metathesis precatalyst, which was in situ converted to the oxidation catalyst by addition of an alkyl hydroperoxide as a chemical trigger and oxidant. The one-flask sequence can be extended beyond 1,2-diketones to quinoxalines, by condensation of the oxidation products with ortho-phenylenediamine.}, language = {en} } @article{SchmidtKunz2013, author = {Schmidt, Bernd and Kunz, Oliver}, title = {Stereoselective synthesis of dienyl phosphonates via extended tethered ring-closing metathesis}, series = {Organic letters}, volume = {15}, journal = {Organic letters}, number = {17}, publisher = {American Chemical Society}, address = {Washington}, issn = {1523-7060}, doi = {10.1021/ol4020078}, pages = {4470 -- 4473}, year = {2013}, abstract = {Allylphosphonates of allylic alcohols were converted to conjugated dienyl phosphonates in a one-flask reaction, comprising a ring-closing metathesis (RCM), a base-induced ring-opening, and an alkylation. The ring-opening proceeds with very high diastereoselectivity, giving exclusively the (1Z,3E)-configured dienes. Single diastereomers and mixtures of diastereomers can be used as starting materials without noticeable effect on the diastereoselectivity of the sequence.}, language = {en} } @article{SchmidtKunz2013, author = {Schmidt, Bernd and Kunz, Oliver}, title = {Bidirectional cross metathesis and ring-closing metathesis/ring opening of a C-2-symmetric building block: a strategy for the synthesis of decanolide natural products}, series = {Beilstein journal of organic chemistry}, volume = {9}, journal = {Beilstein journal of organic chemistry}, publisher = {Beilstein-Institut zur F{\"o}rderung der Chemischen Wissenschaften}, address = {Frankfurt, Main}, issn = {1860-5397}, doi = {10.3762/bjoc.9.289}, pages = {2544 -- 2555}, year = {2013}, abstract = {Starting from the conveniently available ex-chiral pool building block (R,R)-hexa-1,5-diene-3,4-diol, the ten-membered ring lactones stagonolide E and curvulide A were synthesized using a bidirectional olefin-metathesis functionalization of the terminal double bonds. Key steps are (i) a site-selective cross metathesis, (ii) a highly diastereoselective extended tethered RCM to furnish a (Z,E)-configured dienyl carboxylic acid and (iii) a Ru-lipase-catalyzed dynamic kinetic resolution to establish the desired configuration at C9. Ring closure was accomplished by macrolactonization. Curvulide A was synthesized from stagonolide E through Sharpless epoxidation.}, language = {en} } @article{SchmidtRiemerKarras2013, author = {Schmidt, Bernd and Riemer, Martin and Karras, Manfred}, title = {2,2 '-Biphenols via protecting group-free thermal or microwave-accelerated suzuki-miyaura coupling in water}, series = {The journal of organic chemistry}, volume = {78}, journal = {The journal of organic chemistry}, number = {17}, publisher = {American Chemical Society}, address = {Washington}, issn = {0022-3263}, doi = {10.1021/jo401398n}, pages = {8680 -- 8688}, year = {2013}, abstract = {User-friendly protocols for the protecting group-free synthesis of 2,2'-biphenols via Suzuki-Miyaura coupling of o-halophenols and o-boronophenol are presented. The reactions proceed in water in the presence of simple additives such as K2CO3, KOH, KF, or TBAF and with commercially available Pd/C as precatalyst. Expensive or laboriously synthesized ligands or other additives are not required. In the case of bromophenols, efficient rate acceleration and short reaction times were accomplished by microwave irradiation.}, language = {en} } @article{SchwarzeTraegerKellingetal.2013, author = {Schwarze, Thomas and Traeger, Juliane and Kelling, Alexandra and Schilde, Uwe and Holdt, Hans-J{\"u}rgen}, title = {Macrocyclic dithiomaleonitriles for an efficient PdCl2 coordination}, series = {Inorganica chimica acta : the international inorganic chemistry journal}, volume = {408}, journal = {Inorganica chimica acta : the international inorganic chemistry journal}, number = {2}, publisher = {Elsevier}, address = {Lausanne}, issn = {0020-1693}, doi = {10.1016/j.ica.2013.08.020}, pages = {53 -- 58}, year = {2013}, abstract = {We have synthesized a set of new unsaturated macrocyclic dithioethers with an increasing number of flexible methylene units 1-7 (Scheme 2) to investigate the correlation between the ring size of these ligands, the chelation effect and the consequences for an efficient PdCl2 coordination. The dithioethers 1-7 and the complex [PdCl2(4)]center dot CHCl3 were characterized by X-ray diffraction analysis. The crystal structures of 1-7 show that 2-7 are better preorganized chelating ligands for an exocyclic PdCl2 coordination than 1. The chelation effect of 1-7, the orientation of the sulfur atoms and the S center dot center dot center dot S donor distances, are influenced by the flexibility of the methylene units. In this series the unsaturated macrocyclic ligands 5 and 6 are the best chelating ligands for an efficient PdCl2 coordination. Comparative solvent extraction experiments with mn-12S(2)O(2) (mn = maleonitrile) reveal that the low interface activity of the new ligands reduces the extraction rate. However, a comparison with open-chain dithiomaleonitriles shows the impact of the macrocyclic effect of 4 and 5 on the extraction yield.}, language = {en} } @article{ShainyanKirpichenkoKleinpeteretal.2013, author = {Shainyan, Bagrat A. and Kirpichenko, Svetlana V. and Kleinpeter, Erich and Shlykov, Sergey A. and Osadchiy, Dmitriy Yu and Chipanina, Nina N. and Oznobikhina, Larisa P.}, title = {1,3-Dimethy1-3-silapiperidine - synthesis, molecular structure, and conformational analysis by gas-phase electron diffraction, low temperature NMR, IR and Raman Spectroscopy, and quantum chemical calculations}, series = {The journal of organic chemistry}, volume = {78}, journal = {The journal of organic chemistry}, number = {8}, publisher = {American Chemical Society}, address = {Washington}, issn = {0022-3263}, doi = {10.1021/jo400289g}, pages = {3939 -- 3947}, year = {2013}, abstract = {The first Si-H-containing azasilaheterocycle, 1,3-dimethyl-3-silapiperidine 1, was synthesized, and its molecular structure and conformational properties were studied by gas-phase electron diffraction (GED), low temperature NMR, IR and Raman spectroscopy and quantum chemical calculations. The compound exists as a mixture of two conformers possessing the chair conformation with the equatorial NMe group and differing by axial or equatorial position of the SiMe group. In the gas phase, the SiMeax conformer predominates (GED: ax/eq = 65(7):35(7)\%,Delta G = 0.36(18) kcal/mol; IR: ax/eq = 62(5):38(5)\%,Delta G = 0.16(7) kcal/mol). In solution, at 143 k the SiMeeq conformer predominates' in the frozen equilibrium (NMR: ax/eq = 31.5(1.5):68.5(1.5)\%, Delta G = -0.22(2) kcal/mol). Thermodynamic parameters of the ring inversion are determined (Delta G(double dagger) = 8.9-9.0 kcal/mol, Delta H-double dagger = 9.6 kcal/mol, Delta S-double dagger = 2.1 eu). High-level quantum chemical calculations :(MP2, G2, CCSD(T)) nicely reproduce the experimental geometry and the predominance of the axial conformer in the gas phase.}, language = {en} } @article{ShainyanKleinpeter2013, author = {Shainyan, Bagrat A. and Kleinpeter, Erich}, title = {Silacyclohexanes and silaheterocyclohexanes-why are they so different from other heterocyclohexanes?}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {29}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2013.04.126}, pages = {5927 -- 5936}, year = {2013}, abstract = {Stereochemical studies on silaheterocyclohexanes is a 'hot topic' as evidenced by the growing number of publications. During last 10 years a substantial number of substituted silacyclohexanes and heterocyclohexanes containing sulfur, oxygen or nitrogen as the second (or third) heteroatom have been synthesized and studied by variable temperature dynamic NMR spectroscopy, gas-phase electron diffraction, variable temperature IR, Raman, microwave spectroscopy with respect to thermodynamic (frozen conformational equilibria) and kinetic (barrier to ring inversion) information. As the stereochemistry of cyclohexane and its N-, O-, P-, S-hetero analogues is one of keystones of modern theoretical and synthetic organic and heterocyclic chemistry, the stereochemistry of silacyclohexane and its hetero analogs is an important element of theoretical and synthetic organosilicon chemistry. The various classes of saturated six-membered rings were critically compared and studied in detail with respect to differences in their stereochemistry and dynamic behavior.}, language = {en} } @article{ShalomInalFettkenhaueretal.2013, author = {Shalom, Menny and Inal, Sahika and Fettkenhauer, Christian and Neher, Dieter and Antonietti, Markus}, title = {Improving Carbon Nitride Photocatalysis by Supramolecular Preorganization of Monomers}, series = {Journal of the American Chemical Society}, volume = {135}, journal = {Journal of the American Chemical Society}, number = {19}, publisher = {American Chemical Society}, address = {Washington}, issn = {0002-7863}, doi = {10.1021/ja402521s}, pages = {7118 -- 7121}, year = {2013}, abstract = {Here we report a new and simple synthetic pathway to form ordered, hollow carbon nitride structures, using a cyanuric acid melamine (CM) complex in ethanol as a starting product. A detailed analysis of the optical and photocatalytic properties shows that optimum hollow carbon nitride structures are formed after 8 h of condensation. For this condensation time, we find a significantly reduced fluorescence intensity and lifetime, indicating the formation of new, nonradiative deactivation pathways, probably involving charge-transfer processes. Enhanced charge transfer is seen as well from a drastic increase of the photocatalytic activity in the degradation of rhodamine B dye, which is shown to proceed via photoinduced hole transfer. Moreover, we show that various CM morphologies can be obtained using different solvents, which leads to diverse ordered carbon nitride architectures. In all cases, the CM-C3N4 structures exhibited superior photocatalytic activity compared to the bulk material. The utilization of CM hydrogen-bonded complexes opens new opportunities for the significant improvement of carbon nitride synthesis, structure, and optical properties toward an efficient photoactive material for catalysis.}, language = {en} } @phdthesis{Soll2013, author = {Soll, Sebastian}, title = {Structural properties and functional materials of Vinylimidazolium-type Poly(Ionic Liquid)s}, address = {Potsdam}, pages = {127 S.}, year = {2013}, language = {en} } @article{SzatmariHeydenreichKochetal.2013, author = {Szatmari, Istvan and Heydenreich, Matthias and Koch, Andreas and Fulop, Ferenc and Kleinpeter, Erich}, title = {Unexpected isomerization of new naphth[1,3]oxazino[2,3-a] isoquinolines in solution, studied by dynamic NMR and supported by theoretical DFT computations}, series = {Tetrahedron}, volume = {69}, journal = {Tetrahedron}, number = {35}, publisher = {Elsevier}, address = {Oxford}, issn = {0040-4020}, doi = {10.1016/j.tet.2013.06.094}, pages = {7455 -- 7465}, year = {2013}, abstract = {Through the reactions of 1-aminomethyl-2-naphthol and substituted 1-aminobenzyl-2-naphthols with 3,4-dihydroisoquinoline or 6,7-dimethoxy-3,4-dihydroisoquinoline under microwave conditions, naphth[1,2-e][1,3]oxazino[2,3-a]-isoquinoline derivatives were prepared in good yields. The latter reaction was extended by using 2-aminoarylmethyl-1-naphthols, leading to isomeric naphth-[2,1-e][1,3]oxazino[2,3-a] isoquinolines. Beside the detailed NMR spectroscopic and theoretical study of both stereochemistry and dynamic behaviour of these new conformational flexible heterocyclic ring systems an unexpected dynamic process between two diastereomers was observed in solution, studied by variable temperature H-1 NMR spectroscopy and the mechanism proved by theoretical DFT computations.}, language = {en} } @article{TechenCzaplaMoellnitzetal.2013, author = {Techen, Anne and Czapla, Sylvia and M{\"o}llnitz, Kristian and Budach, Dennis B. and Wessig, Pablo and Kumke, Michael Uwe}, title = {Synthesis and spectroscopic characterization of fluorophore-labeled oligospiroketal rods}, series = {Helvetica chimica acta}, volume = {96}, journal = {Helvetica chimica acta}, number = {11}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {0018-019X}, doi = {10.1002/hlca.201200616}, pages = {2046 -- 2067}, year = {2013}, abstract = {Fluorescence probes consisting of well-established fluorophores in combination with rigid molecular rods based on spirane-type structures were investigated with respect to their fluorescence properties under different solvent conditions. The attachment of the dyes was accomplished by 1,3-dipolar cycloaddition between alkynes and azides (click' reaction) and is a prime example for a novel class of sensor constructs. Especially, the attachment of two (different) fluorophores on opposite sides of the molecular rods paves the way to new sensor systems with less bulky (compared to the conventional DNA- or protein-based concepts), nevertheless rigid spacer constructs, e.g., for FRET-based sensing applications. A detailed photophysical characterization was performed in MeOH (and in basic H2O/MeOH mixtures) for i) rod constructs containing carboxyfluorescein, ii) rod constructs containing carboxyrhodamine, iii) rod constructs containing both carboxyfluorescein and carboxyrhodamine, and iv) rod constructs containing both pyrene and perylene parts. For each dye (pair), two rod lengths with different numbers of spirane units were synthesized and investigated. The rod constructs were characterized in ensemble as well as single-molecule fluorescence experiments with respect to i) specific roddye and ii) dyedye interactions. In addition to MeOH and MeOH/NaOH, the rod constructs were also investigated in micellar systems, which were chosen as a simplified model for membranes.}, language = {en} } @article{TentschertDraudeJungnickeletal.2013, author = {Tentschert, J. and Draude, F. and Jungnickel, H. and Haase, A. and Mantion, Alexandre and Galla, S. and Thuenemann, Andreas F. and Taubert, Andreas and Luch, A. and Arlinghaus, H. F.}, title = {TOF-SIMS analysis of cell membrane changes in functional impaired human macrophages upon nanosilver treatment}, series = {Surface and interface analysis : an international journal devoted to the development and application of techniques for the analysis surfaces, interfaces and thin films}, volume = {45}, journal = {Surface and interface analysis : an international journal devoted to the development and application of techniques for the analysis surfaces, interfaces and thin films}, number = {1}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0142-2421}, doi = {10.1002/sia.5155}, pages = {483 -- 485}, year = {2013}, abstract = {Silver nanoparticles (SNP) are among the most commercialized nanoparticles. Here, we show that peptide-coated SNP cause functional impairment of human macrophages. A dose-dependent inhibition of phagocytosis is observed after nanoparticle treatment, and pretreatment of cells with N-acetyl cysteine (NAC) can counteract the phagocytosis disturbances caused by SNP. Using the surface-sensitive mode of time-of-flight secondary ion mass spectrometry, in combination with multivariate statistical methods, we studied the composition of cell membranes in human macrophages upon exposure to SNP with and without NAC preconditioning. This method revealed characteristic changes in the lipid pattern of the cellular membrane outer leaflet in those cells challenged by SNP. Statistical analyses resulted in 19 characteristic ions, which can be used to distinguish between NAC pretreated and untreated macrophages. The present study discusses the assignments of surface cell membrane phospholipids for the identified ions and the resulting changes in the phospholipid pattern of treated cells. We conclude that the adverse effects in human macrophages caused by SNP can be partially reversed through NAC administration. Some alterations, however, remained.}, language = {en} } @article{TheteRojasNeumeyeretal.2013, author = {Thete, Aniket and Rojas, Oscar and Neumeyer, David and Koetz, Joachim and Dujardin, Erik}, title = {Ionic liquid-assisted morphosynthesis of gold nanorods using polyethyleneimine-capped seeds}, series = {RSC Advances}, volume = {3}, journal = {RSC Advances}, number = {34}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {2046-2069}, doi = {10.1039/c3ra22112a}, pages = {14294 -- 14298}, year = {2013}, abstract = {Seed-mediated gold nanorods with tunable lengths are prepared using new polyethyleneimine-capped gold nanoparticles synthesized in ionic liquid. The effect of polyethyleneimine and ionic liquid during nanorod growth is investigated and shows a marked effect on their final aspect ratio.}, language = {en} } @article{TheteRojasNeumeyeretal.2013, author = {Thete, Aniket and Rojas, Oscar and Neumeyer, David and Koetz, Joachim and Dujardin, Erik}, title = {Ionic liquid-assisted morphosynthesis of gold nanorods using polyethyleneimine-capped seeds}, doi = {10.1039/C3RA22112A}, year = {2013}, abstract = {Seed-mediated gold nanorods with tunable lengths are prepared using new polyethyleneimine-capped gold nanoparticles synthesized in ionic liquid. The effect of polyethyleneimine and ionic liquid during nanorod growth is investigated and shows a marked effect on their final aspect ratio.}, language = {en} } @article{ThielZehbeRoesneretal.2013, author = {Thiel, Kerstin and Zehbe, Rolf and Roesner, Jer{\^o}m{\´e} and Strauch, Peter and Enthaler, Stephan and Thomas, Arne}, title = {A polymer analogous reaction for the formation of imidazolium and NHC based porous polymer networks}, doi = {10.1039/C2PY20947K}, year = {2013}, abstract = {A polymer analogous reaction was carried out to generate a porous polymeric network with N-heterocyclic carbenes (NHC) in the polymer backbone. Using a stepwise approach, first a polyimine network is formed by polymerization of the tetrafunctional amine tetrakis(4-aminophenyl)methane. This polyimine network is converted in the second step into polyimidazolium chloride and finally to a polyNHC network. Furthermore a porous Cu(II)-coordinated polyNHC network can be generated. Supercritical drying generates polymer networks with high permanent surface areas and porosities which can be applied for different catalytic reactions. The catalytic properties were demonstrated for example in the activation of CO2 or in the deoxygenation of sulfoxides to the corresponding sulfides.}, language = {en} } @article{ThielZehbeRoeseretal.2013, author = {Thiel, Kerstin and Zehbe, Rolf and R{\"o}ser, Jerome and Strauch, Peter and Enthaler, Stephan and Thomas, Arne}, title = {A polymer analogous reaction for the formation of imidazolium and NHC based porous polymer networks}, series = {Polymer Chemistry}, volume = {4}, journal = {Polymer Chemistry}, number = {6}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {1759-9954}, doi = {10.1039/c2py20947k}, pages = {1848 -- 1856}, year = {2013}, abstract = {A polymer analogous reaction was carried out to generate a porous polymeric network with N-heterocyclic carbenes (NHC) in the polymer backbone. Using a stepwise approach, first a polyimine network is formed by polymerization of the tetrafunctional amine tetrakis(4-aminophenyl)methane. This polyimine network is converted in the second step into polyimidazolium chloride and finally to a polyNHC network. Furthermore a porous Cu(II)-coordinated polyNHC network can be generated. Supercritical drying generates polymer networks with high permanent surface areas and porosities which can be applied for different catalytic reactions. The catalytic properties were demonstrated for example in the activation of CO2 or in the deoxygenation of sulfoxides to the corresponding sulfides.}, language = {en} }