@article{MielkeRogassBoescheetal.2016,
  author    = {Mielke, Christian and Rogass, Christian and B{\"o}sche, Nina Kristine and Segl, Karl and Altenberger, Uwe},
  title     = {EnGeoMAP 2.0-Automated Hyperspectral Mineral Identification for the German EnMAP Space Mission},
  series = {Remote sensing},
  volume    = {8},
  journal   = {Remote sensing},
  publisher = {MDPI},
  address   = {Basel},
  issn      = {2072-4292},
  doi       = {10.3390/rs8020127},
  pages     = {392 -- 414},
  year      = {2016},
  abstract  = {Algorithms for a rapid analysis of hyperspectral data are becoming more and more important with planned next generation spaceborne hyperspectral missions such as the Environmental Mapping and Analysis Program (EnMAP) and the Japanese Hyperspectral Imager Suite (HISUI), together with an ever growing pool of hyperspectral airborne data. The here presented EnGeoMAP 2.0 algorithm is an automated system for material characterization from imaging spectroscopy data, which builds on the theoretical framework of the Tetracorder and MICA (Material Identification and Characterization Algorithm) of the United States Geological Survey and of EnGeoMAP 1.0 from 2013. EnGeoMAP 2.0 includes automated absorption feature extraction, spatio-spectral gradient calculation and mineral anomaly detection. The usage of EnGeoMAP 2.0 is demonstrated at the mineral deposit sites of Rodalquilar (SE-Spain) and Haib River (S-Namibia) using HyMAP and simulated EnMAP data. Results from Hyperion data are presented as supplementary information.},
  language  = {en}
}
@article{BrellRogassSegletal.2016,
  author    = {Brell, Maximilian and Rogass, Christian and Segl, Karl and Bookhagen, Bodo and Guanter, Luis},
  title     = {Improving Sensor Fusion: A Parametric Method for the Geometric Coalignment of Airborne Hyperspectral and Lidar Data},
  series = {IEEE transactions on geoscience and remote sensing},
  volume    = {54},
  journal   = {IEEE transactions on geoscience and remote sensing},
  publisher = {Inst. of Electr. and Electronics Engineers},
  address   = {Piscataway},
  issn      = {0196-2892},
  doi       = {10.1109/TGRS.2016.2518930},
  pages     = {3460 -- 3474},
  year      = {2016},
  abstract  = {Synergistic applications based on integrated hyperspectral and lidar data are receiving a growing interest from the remote-sensing community. A prerequisite for the optimum sensor fusion of hyperspectral and lidar data is an accurate geometric coalignment. The simple unadjusted integration of lidar elevation and hyperspectral reflectance causes a substantial loss of information and does not exploit the full potential of both sensors. This paper presents a novel approach for the geometric coalignment of hyperspectral and lidar airborne data, based on their respective adopted return intensity information. The complete approach incorporates ray tracing and subpixel procedures in order to overcome grid inherent discretization. It aims at the correction of extrinsic and intrinsic (camera resectioning) parameters of the hyperspectral sensor. In additional to a tie-point-based coregistration, we introduce a ray-tracing-based back projection of the lidar intensities for area-based cost aggregation. The approach consists of three processing steps. First is a coarse automatic tie-point-based boresight alignment. The second step coregisters the hyperspectral data to the lidar intensities. Third is a parametric coalignment refinement with an area-based cost aggregation. This hybrid approach of combining tie-point features and area-based cost aggregation methods for the parametric coregistration of hyperspectral intensity values to their corresponding lidar intensities results in a root-mean-square error of 1/3 pixel. It indicates that a highly integrated and stringent combination of different coalignment methods leads to an improvement of the multisensor coregistration.},
  language  = {en}
}
@misc{MielkeRogassBoescheetal.2017,
  author    = {Mielke, Christian and Rogass, Christian and Boesche, Nina and Segl, Karl and Altenberger, Uwe},
  title     = {EnGeoMAP 2.0},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-400650},
  pages     = {26},
  year      = {2017},
  abstract  = {Algorithms for a rapid analysis of hyperspectral data are becoming more and more important with planned next generation spaceborne hyperspectral missions such as the Environmental Mapping and Analysis Program (EnMAP) and the Japanese Hyperspectral Imager Suite (HISUI), together with an ever growing pool of hyperspectral airborne data. The here presented EnGeoMAP 2.0 algorithm is an automated system for material characterization from imaging spectroscopy data, which builds on the theoretical framework of the Tetracorder and MICA (Material Identification and Characterization Algorithm) of the United States Geological Survey and of EnGeoMAP 1.0 from 2013. EnGeoMAP 2.0 includes automated absorption feature extraction, spatio-spectral gradient calculation and mineral anomaly detection. The usage of EnGeoMAP 2.0 is demonstrated at the mineral deposit sites of Rodalquilar (SE-Spain) and Haib River (S-Namibia) using HyMAP and simulated EnMAP data. Results from Hyperion data are presented as supplementary information.},
  language  = {en}
}
@misc{BoescheRogassLubitzetal.2017,
  author    = {B{\"o}sche, Nina Kristine and Rogass, Christian and Lubitz, Christin and Brell, Maximilian and Herrmann, Sabrina and Mielke, Christian and Tonn, Sabine and Appelt, Oona and Altenberger, Uwe and Kaufmann, Hermann},
  title     = {Hyperspectral REE (Rare Earth Element) mapping of outcrops},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-400171},
  pages     = {27},
  year      = {2017},
  abstract  = {In this study, an in situ application for identifying neodymium (Nd) enriched surface materials that uses multitemporal hyperspectral images is presented (HySpex sensor). Because of the narrow shape and shallow absorption depth of the neodymium absorption feature, a method was developed for enhancing and extracting the necessary information for neodymium from image spectra, even under illumination conditions that are not optimal. For this purpose, the two following approaches were developed: (1) reducing noise and analyzing changing illumination conditions by averaging multitemporal image scenes and (2) enhancing the depth of the desired absorption band by deconvolving every image spectrum with a Gaussian curve while the rest of the spectrum remains unchanged (Richardson-Lucy deconvolution). To evaluate these findings, nine field samples from the Fen complex in Norway were analyzed using handheld X-ray fluorescence devices and by conducting detailed laboratory-based geochemical rare earth element determinations. The result is a qualitative outcrop map that highlights zones that are enriched in neodymium. To reduce the influences of non-optimal illumination, particularly at the studied site, a minimum of seven single acquisitions is required. Sharpening the neodymium absorption band allows for robust mapping, even at the outer zones of enrichment. From the geochemical investigations, we found that iron oxides decrease the applicability of the method. However, iron-related absorption bands can be used as secondary indicators for sulfidic ore zones that are mainly enriched with rare earth elements. In summary, we found that hyperspectral spectroscopy is a noninvasive, fast and cost-saving method for determining neodymium at outcrop surfaces},
  language  = {en}
}
@article{BrellSeglGuanteretal.2017,
  author    = {Brell, Maximilian and Segl, Karl and Guanter, Luis and Bookhagen, Bodo},
  title     = {Hyperspectral and Lidar Intensity Data Fusion: A Framework for the Rigorous Correction of Illumination, Anisotropic Effects, and Cross Calibration},
  series = {IEEE transactions on geoscience and remote sensing},
  volume    = {55},
  journal   = {IEEE transactions on geoscience and remote sensing},
  publisher = {Inst. of Electr. and Electronics Engineers},
  address   = {Piscataway},
  issn      = {0196-2892},
  doi       = {10.1109/TGRS.2017.2654516},
  pages     = {2799 -- 2810},
  year      = {2017},
  abstract  = {The fusion of hyperspectral imaging (HSI) sensor and airborne lidar scanner (ALS) data provides promising potential for applications in environmental sciences. Standard fusion approaches use reflectance information from the HSI and distance measurements from the ALS to increase data dimen-sionality and geometric accuracy. However, the potential for data fusion based on the respective intensity information of the complementary active and passive sensor systems is high and not yet fully exploited. Here, an approach for the rigorous illumination correction of HSI data, based on the radiometric cross-calibrated return intensity information of ALS data, is presented. The cross calibration utilizes a ray tracing-based fusion of both sensor measurements by intersecting their particular beam shapes. The developed method is capable of compensating for the drawbacks of passive HSI systems, such as cast and cloud shadowing effects, illumination changes over time, across track illumination, and partly anisotropy effects. During processing, spatial and temporal differences in illumination patterns are detected and corrected over the entire HSI wavelength domain. The improvement in the classification accuracy of urban and vegetation surfaces demonstrates the benefit and potential of the proposed HSI illumination correction. The presented approach is the first step toward the rigorous in-flight fusion of passive and active system characteristics, enabling new capabilities for a variety of applications.},
  language  = {en}
}
@phdthesis{Beamish2019,
  author    = {Beamish, Alison Leslie},
  title     = {Hyperspectral remote sensing of the spatial and temporal heterogeneity of low Arctic vegetation},
  doi       = {10.25932/publishup-42592},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-425922},
  school      = {Universit{\"a}t Potsdam},
  pages     = {v, 102},
  year      = {2019},
  abstract  = {Arctic tundra ecosystems are experiencing warming twice the global average and Arctic vegetation is responding in complex and heterogeneous ways. Shifting productivity, growth, species composition, and phenology at local and regional scales have implications for ecosystem functioning as well as the global carbon and energy balance. Optical remote sensing is an effective tool for monitoring ecosystem functioning in this remote biome. However, limited field-based spectral characterization of the spatial and temporal heterogeneity limits the accuracy of quantitative optical remote sensing at landscape scales. To address this research gap and support current and future satellite missions, three central research questions were posed: • Does canopy-level spectral variability differ between dominant low Arctic vegetation communities and does this variability change between major phenological phases? • How does canopy-level vegetation colour images recorded with high and low spectral resolution devices relate to phenological changes in leaf-level photosynthetic pigment concentrations? • How does spatial aggregation of high spectral resolution data from the ground to satellite scale influence low Arctic tundra vegetation signatures and thereby what is the potential of upcoming hyperspectral spaceborne systems for low Arctic vegetation characterization? To answer these questions a unique and detailed database was assembled. Field-based canopy-level spectral reflectance measurements, nadir digital photographs, and photosynthetic pigment concentrations of dominant low Arctic vegetation communities were acquired at three major phenological phases representing early, peak and late season. Data were collected in 2015 and 2016 in the Toolik Lake Research Natural Area located in north central Alaska on the North Slope of the Brooks Range. In addition to field data an aerial AISA hyperspectral image was acquired in the late season of 2016. Simulations of broadband Sentinel-2 and hyperspectral Environmental and Mapping Analysis Program (EnMAP) satellite reflectance spectra from ground-based reflectance spectra as well as simulations of EnMAP imagery from aerial hyperspectral imagery were also obtained. Results showed that canopy-level spectral variability within and between vegetation communities differed by phenological phase. The late season was identified as the most discriminative for identifying many dominant vegetation communities using both ground-based and simulated hyperspectral reflectance spectra. This was due to an overall reduction in spectral variability and comparable or greater differences in spectral reflectance between vegetation communities in the visible near infrared spectrum. Red, green, and blue (RGB) indices extracted from nadir digital photographs and pigment-driven vegetation indices extracted from ground-based spectral measurements showed strong significant relationships. RGB indices also showed moderate relationships with chlorophyll and carotenoid pigment concentrations. The observed relationships with the broadband RGB channels of the digital camera indicate that vegetation colour strongly influences the response of pigment-driven spectral indices and digital cameras can track the seasonal development and degradation of photosynthetic pigments. Spatial aggregation of hyperspectral data from the ground to airborne, to simulated satel-lite scale was influenced by non-photosynthetic components as demonstrated by the distinct shift of the red edge to shorter wavelengths. Correspondence between spectral reflectance at the three scales was highest in the red spectrum and lowest in the near infra-red. By artificially mixing litter spectra at different proportions to ground-based spectra, correspondence with aerial and satellite spectra increased. Greater proportions of litter were required to achieve correspondence at the satellite scale. Overall this thesis found that integrating multiple temporal, spectral, and spatial data is necessary to monitor the complexity and heterogeneity of Arctic tundra ecosystems. The identification of spectrally similar vegetation communities can be optimized using non-peak season hyperspectral data leading to more detailed identification of vegetation communities. The results also highlight the power of vegetation colour to link ground-based and satellite data. Finally, a detailed characterization non-photosynthetic ecosystem components is crucial for accurate interpretation of vegetation signals at landscape scales.},
  language  = {en}
}
@phdthesis{Koerting2021,
  author    = {Koerting, Friederike Magdalena},
  title     = {Hybrid imaging spectroscopy approaches for open pit mining},
  doi       = {10.25932/publishup-49909},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-499091},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xxix, 269},
  year      = {2021},
  abstract  = {This work develops hybrid methods of imaging spectroscopy for open pit mining and examines their feasibility compared with state-of-the-art. The material distribution within a mine face differs in the small scale and within daily assigned extraction segments. These changes can be relevant to subsequent processing steps but are not always visually identifiable prior to the extraction. Misclassifications that cause false allocations of extracted material need to be minimized in order to reduce energy-intensive material re-handling. The use of imaging spectroscopy aspires to the allocation of relevant deposit-specific materials before extraction, and allows for efficient material handling after extraction. The aim of this work is the parameterization of imaging spectroscopy for pit mining applications and the development and evaluation of a workflow for a mine face, ground- based, spectral characterization. In this work, an application-based sensor adaptation is proposed. The sensor complexity is reduced by down-sampling the spectral resolution of the system based on the samples' spectral characteristics. This was achieved by the evaluation of existing hyperspectral outcrop analysis approaches based on laboratory sample scans from the iron quadrangle in Minas Gerais, Brazil and by the development of a spectral mine face monitoring workflow which was tested for both an operating and an inactive open pit copper mine in the Republic of Cyprus. The workflow presented here is applied to three regional data sets: 1) Iron ore samples from Brazil, (laboratory); 2) Samples and hyperspectral mine face imagery from the copper-gold-pyrite mine Apliki, Republic of Cyprus (laboratory and mine face data); and 3) Samples and hyperspectral mine face imagery from the copper-gold-pyrite deposit Three Hills, Republic of Cyprus (laboratory and mine face data). The hyperspectral laboratory dataset of fifteen Brazilian iron ore samples was used to evaluate different analysis methods and different sensor models. Nineteen commonly used methods to analyze and map hyperspectral data were compared regarding the methods' resulting data products and the accuracy of the mapping and the analysis computation time. Four of the evaluated methods were determined for subsequent analyses to determine the best-performing algorithms: The spectral angle mapper (SAM), a support vector machine algorithm (SVM), the binary feature fitting algorithm (BFF) and the EnMap geological mapper (EnGeoMap). Next, commercially available imaging spectroscopy sensors were evaluated for their usability in open pit mining conditions. Step-wise downsampling of the data - the reduction of the number of bands with an increase of each band's bandwidth - was performed to investigate the possible simplification and ruggedization of a sensor without a quality fall-off of the mapping results. The impact of the atmosphere visible in the spectrum between 1300-2010nm was reduced by excluding the spectral range from the data for mapping. This tested the feasibility of the method under realistic open pit data conditions. Thirteen datasets based on the different, downsampled sensors were analyzed with the four predetermined methods. The optimum sensor for spectral mine face material distinction was determined as a VNIR-SWIR sensor with 40nm bandwidths in the VNIR and 15nm bandwidths in the SWIR spectral range and excluding the atmospherically impacted bands. The Apliki mine sample dataset was used for the application of the found optimal analyses and sensors. Thirty-six samples were analyzed geochemically and mineralogically. The sample spectra were compiled to two spectral libraries, both distinguishing between seven different geochemical-spectral clusters. The reflectance dataset was downsampled to five different sensors. The five different datasets were mapped with the SAM, BFF and SVM method achieving mapping accuracies of 85-72\%, 85-76\% and 57-46\% respectively. One mine face scan of Apliki was used for the application of the developed workflow. The mapping results were validated against the geochemistry and mineralogy of thirty-six documented field sampling points and a zonation map of the mine face which is based on sixty-six samples and field mapping. The mine face was analyzed with SAM and BFF. The analysis maps were visualized on top of a Structure-from-Motion derived 3D model of the open pit. The mapped geological units and zones correlate well with the expected zonation of the mine face. The third set of hyperspectral imagery from Three Hills was available for applying the fully-developed workflow. Geochemical sample analyses and laboratory spectral data of fifteen different samples from the Three Hills mine, Republic of Cyprus, were used to analyse a downsampled mine face scan of the open pit. Here, areas of low, medium and high ore content were identified. The developed workflow is successfully applied to the open pit mines Apliki and Three Hills and the spectral maps reflect the prevailing geological conditions. This work leads through the acquisition, preparation and processing of imaging spectroscopy data, the optimum choice of analysis methodology, and the utilization of simplified, robust sensors that meet the requirements of open pit mining conditions. It accentuates the importance of a site-specific and deposit-specific spectral library for the mine face analysis and underlines the need for geological and spectral analysis experts to successfully implement imaging spectroscopy in the field of open pit mining.},
  language  = {en}
}