@article{BlomeyerBuchmannLascorzetal.2013, author = {Blomeyer, Dorothea and Buchmann, Arlette F. and Lascorz, Jesus and Zimmermann, Ulrich S. and Esser, G{\"u}nter and Desrivieres, Sylvane and Schmidt, Martin H. and Banaschewski, Tobias and Schumann, Gunter and Laucht, Manfred}, title = {Association of PER2 genotype and stressful life events with alcohol drinking in young adults}, series = {PLoS one}, volume = {8}, journal = {PLoS one}, number = {3}, publisher = {PLoS}, address = {San Fransisco}, issn = {1932-6203}, doi = {10.1371/journal.pone.0059136}, pages = {7}, year = {2013}, abstract = {Background: Clock genes govern circadian rhythms and shape the effect of alcohol use on the physiological system. Exposure to severe negative life events is related to both heavy drinking and disturbed circadian rhythmicity. The aim of this study was 1) to extend previous findings suggesting an association of a haplotype tagging single nucleotide polymorphism of PER2 gene with drinking patterns, and 2) to examine a possible role for an interaction of this gene with life stress in hazardous drinking. Methods: Data were collected as part of an epidemiological cohort study on the outcome of early risk factors followed since birth. At age 19 years, 268 young adults (126 males, 142 females) were genotyped for PER2 rs56013859 and were administered a 45-day alcohol timeline follow-back interview and the Alcohol Use Disorders Identification Test (AUDIT). Life stress was assessed as the number of severe negative life events during the past four years reported in a questionnaire and validated by interview. Results: Individuals with the minor G allele of rs56013859 were found to be less engaged in alcohol use, drinking at only 72\% of the days compared to homozygotes for the major A allele. Moreover, among regular drinkers, a gene x environment interaction emerged (p = .020). While no effects of genotype appeared under conditions of low stress, carriers of the G allele exhibited less hazardous drinking than those homozygous for the A allele when exposed to high stress. Conclusions: These findings may suggest a role of the circadian rhythm gene PER2 in both the drinking patterns of young adults and in moderating the impact of severe life stress on hazardous drinking in experienced alcohol users. However, in light of the likely burden of multiple tests, the nature of the measures used and the nominal evidence of interaction, replication is needed before drawing firm conclusions.}, language = {en} } @article{KuptsovKuznetsovPikovskij2013, author = {Kuptsov, Pavel V. and Kuznetsov, Sergey P. and Pikovskij, Arkadij}, title = {Hyperbolic chaos at blinking coupling of noisy oscillators}, series = {Physical review : E, Statistical, nonlinear and soft matter physics}, volume = {87}, journal = {Physical review : E, Statistical, nonlinear and soft matter physics}, number = {3}, publisher = {American Physical Society}, address = {College Park}, issn = {1539-3755}, doi = {10.1103/PhysRevE.87.032912}, pages = {7}, year = {2013}, abstract = {We study an ensemble of identical noisy phase oscillators with a blinking mean-field coupling, where onecluster and two-cluster synchronous states alternate. In the thermodynamic limit the population is described by a nonlinear Fokker-Planck equation. We show that the dynamics of the order parameters demonstrates hyperbolic chaos. The chaoticity manifests itself in phases of the complex mean field, which obey a strongly chaotic Bernoulli map. Hyperbolicity is confirmed by numerical tests based on the calculations of relevant invariant Lyapunov vectors and Lyapunov exponents. We show how the chaotic dynamics of the phases is slightly smeared by finite-size fluctuations. DOI: 10.1103/PhysRevE.87.032912}, language = {en} } @article{KomarovPikovskij2013, author = {Komarov, Maxim and Pikovskij, Arkadij}, title = {Dynamics of multifrequency oscillator communities}, series = {Physical review letters}, volume = {110}, journal = {Physical review letters}, number = {13}, publisher = {American Physical Society}, address = {College Park}, issn = {0031-9007}, doi = {10.1103/PhysRevLett.110.134101}, pages = {5}, year = {2013}, abstract = {We consider a generalization of the Kuramoto model of coupled oscillators to the situation where communities of oscillators having essentially different natural frequencies interact. General equations describing possible resonances between the communities' frequencies are derived. The simplest situation of three resonantly interacting groups is analyzed in detail. We find conditions for the mutual coupling to promote or suppress synchrony in individual populations and present examples where the interaction between communities leads to their synchrony or to a partially asynchronous state or to a chaotic dynamics of order parameters. DOI: 10.1103/PhysRevLett.110.134101}, language = {en} } @article{PingelNeher2013, author = {Pingel, P. and Neher, Dieter}, title = {Comprehensive picture of p-type doping of P3HT with the molecular acceptor F(4)TCNQ}, series = {Physical review : B, Condensed matter and materials physics}, volume = {87}, journal = {Physical review : B, Condensed matter and materials physics}, number = {11}, publisher = {American Physical Society}, address = {College Park}, issn = {1098-0121}, doi = {10.1103/PhysRevB.87.115209}, pages = {9}, year = {2013}, abstract = {By means of optical spectroscopy, Kelvin probe, and conductivity measurements, we study the p-type doping of the donor polymer poly(3-hexylthiophene), P3HT, with the molecular acceptor tetrafluorotetracyanoquin-odimethane, F(4)TCNQ, covering a broad range of molar doping ratios from the ppm to the percent regime. Thorough quantitative analysis of the specific near-infrared absorption bands of ionized F(4)TCNQ reveals that almost every F(4)TCNQ dopant undergoes integer charge transfer with a P3HT site. However, only about 5\% of these charge carrier pairs are found to dissociate and contribute a free hole for electrical conduction. The nonlinear behavior of the conductivity on doping ratio is rationalized by a numerical mobility model that accounts for the broadening of the energetic distribution of transport sites by the Coulomb potentials of ionized F(4)TCNQ dopants. DOI: 10.1103/PhysRevB.87.115209}, language = {en} } @article{VossBolhuisFeweretal.2013, author = {Voss, Bj{\"o}rn and Bolhuis, Henk and Fewer, David P. and Kopf, Matthias and M{\"o}ke, Fred and Haas, Fabian and El-Shehawy, Rehab and Hayes, Paul and Bergman, Birgitta and Sivonen, Kaarina and Dittmann-Th{\"u}nemann, Elke and Scanlan, Dave J. and Hagemann, Martin and Stal, Lucas J. and Hess, Wolfgang R.}, title = {Insights into the physiology and ecology of the brackish-water-adapted cyanobacterium nodularia spumigena CCY9414 based on a genome-transcriptome analysis}, series = {PLoS one}, volume = {8}, journal = {PLoS one}, number = {3}, publisher = {PLoS}, address = {San Fransisco}, issn = {1932-6203}, doi = {10.1371/journal.pone.0060224}, pages = {22}, year = {2013}, abstract = {Nodularia spumigena is a filamentous diazotrophic cyanobacterium that dominates the annual late summer cyanobacterial blooms in the Baltic Sea. But N. spumigena also is common in brackish water bodies worldwide, suggesting special adaptation allowing it to thrive at moderate salinities. A draft genome analysis of N. spumigena sp. CCY9414 yielded a single scaffold of 5,462,271 nucleotides in length on which genes for 5,294 proteins were annotated. A subsequent strand-specific transcriptome analysis identified more than 6,000 putative transcriptional start sites (TSS). Orphan TSSs located in intergenic regions led us to predict 764 non-coding RNAs, among them 70 copies of a possible retrotransposon and several potential RNA regulators, some of which are also present in other N2-fixing cyanobacteria. Approximately 4\% of the total coding capacity is devoted to the production of secondary metabolites, among them the potent hepatotoxin nodularin, the linear spumigin and the cyclic nodulapeptin. The transcriptional complexity associated with genes involved in nitrogen fixation and heterocyst differentiation is considerably smaller compared to other Nostocales. In contrast, sophisticated systems exist for the uptake and assimilation of iron and phosphorus compounds, for the synthesis of compatible solutes, and for the formation of gas vesicles, required for the active control of buoyancy. Hence, the annotation and interpretation of this sequence provides a vast array of clues into the genomic underpinnings of the physiology of this cyanobacterium and indicates in particular a competitive edge of N. spumigena in nutrient-limited brackish water ecosystems.}, language = {en} } @article{KarpuzCevikKoppitzetal.2013, author = {Karpuz, Eylem Guzel and Cevik, Ahmet Sinan and Koppitz, J{\"o}rg and Cangul, Ismail Naci}, title = {Some fixed-point results on (generalized) Bruck-Reilly *-extensions of monoids}, series = {Fixed point theory and applications}, journal = {Fixed point theory and applications}, number = {3}, publisher = {Springer}, address = {Cham}, issn = {1687-1812}, doi = {10.1186/1687-1812-2013-78}, pages = {9}, year = {2013}, abstract = {In this paper, we determine necessary and sufficient conditions for Bruck-Reilly and generalized Bruck-Reilly *-extensions of arbitrary monoids to be regular, coregular and strongly pi-inverse. These semigroup classes have applications in various field of mathematics, such as matrix theory, discrete mathematics and p-adic analysis (especially in operator theory). In addition, while regularity and coregularity have so many applications in the meaning of boundaries (again in operator theory), inverse monoids and Bruck-Reilly extensions contain a mixture fixed-point results of algebra, topology and geometry within the purposes of this journal.}, language = {en} } @article{CostaFoersterdeAraujoetal.2013, author = {Costa, Alexandre Cunha and F{\"o}rster, Saskia and de Araujo, Jose Carlos and Bronstert, Axel}, title = {Analysis of channel transmission losses in a dryland river reach in north-eastern Brazil using streamflow series, groundwater level series and multi-temporal satellite data}, series = {Hydrological processes}, volume = {27}, journal = {Hydrological processes}, number = {7}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {1099-1085}, doi = {10.1002/hyp.9243}, pages = {1046 -- 1060}, year = {2013}, abstract = {Scarcity of hydrological data, especially streamflow discharge and groundwater level series, restricts the understanding of channel transmission losses (TL) in drylands. Furthermore, the lack of information on spatial river dynamics encompasses high uncertainty on TL analysis in large rivers. The objective of this study was to combine the information from streamflow and groundwater level series with multi-temporal satellite data to derive a hydrological concept of TL for a reach of the Middle Jaguaribe River (MJR) in semi-arid north-eastern Brazil. Based on this analysis, we proposed strategies for its modelling and simulation. TL take place in an alluvium, where river and groundwater can be considered to be hydraulically connected. Most losses certainly infiltrated only through streambed and levees and not through the flood plains, as could be shown by satellite image analysis. TL events whose input river flows were smaller than a threshold did not reach the outlet of the MJR. TL events whose input flows were higher than this threshold reached the outlet losing on average 30\% of their input. During the dry seasons (DS) and at the beginning of rainy seasons (DS/BRS), no river flow is expected for pre-events, and events have vertical infiltration into the alluvium. At the middle and the end of the rainy seasons (MRS/ERS), river flow sustained by base flow occurs before/after events, and lateral infiltration into the alluvium plays a major role. Thus, the MJR shifts from being a losing river at DS/BRS to become a losing/gaining (mostly losing) river at MRS/ERS. A model of this system has to include the coupling of river and groundwater flow processes linked by a leakage approach.}, language = {en} } @article{DodooBalzerHugeletal.2013, author = {Dodoo, Samuel and Balzer, Bizan N. and Hugel, Thorsten and Laschewsky, Andr{\´e} and von Klitzing, Regine}, title = {Effect of ionic strength and layer number on swelling of polyelectrolyte multilayers in water vapour}, series = {Soft materials}, volume = {11}, journal = {Soft materials}, number = {2}, publisher = {Taylor \& Francis Group}, address = {Philadelphia}, issn = {1539-445X}, doi = {10.1080/1539445X.2011.607203}, pages = {157 -- 164}, year = {2013}, abstract = {The swelling behavior of polyelectrolyte multilayers (PEMs) of poly(sodium-4 styrene sulfonate) (PSS) and poly(diallyl dimethyl ammonium chloride) (PDADMAC) prepared from aqueous solution of 0.1 M and 0.5 M NaCl are investigated by ellipsometry and Atomic Force Microscopy (AFM). From 1 double-layer up to 4 double-layers of 0.1 M NaCl, the amount of swelling water in the PEMs decreases with increasing number of adsorbed double layers due to an increase in polyelectrolyte density as a result of the attraction between the positively charged outermost PDADMAC layer and the Si substrate. From 6 double layers to 30 double layers, the attraction is reduced due to a much larger distance between substrate and outermost layer leading to a much lower polyelectrolyte density and higher swelling water. In PEMs prepared from aqueous solution of 0.5 M NaCl, the amount of water constantly increases which is related to a monotonically decreasing polyelectrolyte density with increasing number of polyelectrolyte layers. Studies of the surface topology also indicate a transition from a more substrate affected interphase behavior to a continuum properties of the polyelectrolyte multilayers. The threshold for the transition from interphase to continuum behavior depends on the preparation conditions of the PEM.}, language = {en} } @article{AndresGohlkeBroekeretal.2013, author = {Andres, Dorothee and Gohlke, Ulrich and Br{\"o}ker, Nina Kristin and Schulze, Stefan and Rabsch, Wolfgang and Heinemann, Udo and Barbirz, Stefanie and Seckler, Robert}, title = {An essential serotype recognition pocket on phage P22 tailspike protein forces Salmonella enterica serovar Paratyphi A O-antigen fragments to bind as nonsolution conformers}, series = {Glycobiology}, volume = {23}, journal = {Glycobiology}, number = {4}, publisher = {Oxford Univ. Press}, address = {Cary}, issn = {0959-6658}, doi = {10.1093/glycob/cws224}, pages = {486 -- 494}, year = {2013}, abstract = {Bacteriophage P22 recognizes O-antigen polysaccharides of Salmonella enterica subsp. enterica (S.) with its tailspike protein (TSP). In the serovars S. Typhimurium, S. Enteritidis, and S. Paratyphi A, the tetrasaccharide repeat units of the respective O-antigens consist of an identical main chain trisaccharide but different 3,6-dideoxyhexose substituents. Here, the epimers abequose, tyvelose and paratose determine the specific serotype. P22 TSP recognizes O-antigen octasaccharides in an extended binding site with a single 3,6-dideoxyhexose binding pocket. We have isolated S. Paratyphi A octasaccharides which were not available previously and determined the crystal structure of their complex with P22 TSP. We discuss our data together with crystal structures of complexes with S. Typhimurium and S. Enteritidis octasaccharides determined earlier. Isothermal titration calorimetry showed that S. Paratyphi A octasaccharide binds P22 TSP less tightly, with a difference in binding free energy of similar to 7 kJ mol(-1) at 20 degrees C compared with S. Typhimurium and S. Enteritidis octasaccharides. Individual protein-carbohydrate contacts were probed by amino acid replacements showing that the dideoxyhexose pocket contributes to binding of all three serotypes. However, S. Paratyphi A octasaccharides bind in a conformation with an energetically unfavorable phi/epsilon glycosidic bond angle combination. In contrast, octasaccharides from the other serotypes bind as solution-like conformers. Two water molecules are conserved in all P22 TSP complexes with octasaccharides of different serotypes. They line the dideoxyhexose binding pocket and force the S. Paratyphi A octasaccharides to bind as nonsolution conformers. This emphasizes the role of solvent as part of carbohydrate binding sites.}, language = {en} } @article{RomeroVianaKienelWilkesetal.2013, author = {Romero-Viana, Lidia and Kienel, Ulrike and Wilkes, Heinz and Sachse, Dirk}, title = {Growth-dependent hydrogen isotopic fractionation of algal lipid biomarkers in hypersaline Isabel Lake (Mexico)}, series = {Geochimica et cosmochimica acta : journal of the Geochemical Society and the Meteoritical Society}, volume = {106}, journal = {Geochimica et cosmochimica acta : journal of the Geochemical Society and the Meteoritical Society}, number = {4}, publisher = {Elsevier}, address = {Oxford}, issn = {0016-7037}, doi = {10.1016/j.gca.2012.12.017}, pages = {490 -- 500}, year = {2013}, abstract = {In this study, we evaluated the potential of the hydrogen isotopic composition of algal lipid biomarkers as a proxy for past hydroclimatic variability in hypersaline Isabel Lake, Mexico (Eastern Pacific). We compared rainfall variability recorded in the region over the last 65 years with changes in delta D values of the most abundant compounds preserved in the uppermost 16 cm of lake sediment. Changes in delta D values of the 1,15-C-32 diol (delta D-diol), a specific biomarker of algal populations, were related to rainfall variability; specifically, n-alkyl diols were more deuterium-enriched (depleted) during wetter (drier) periods. Strikingly, neither the magnitude of lipid biomarker isotopic changes over interannual timescales (of up to 70-80 parts per thousand) nor the direction of that variability can be explained by changes in delta D values of the water source or salinity fluctuations (approximately 30 on the practical salinity scale) controlled by seasonal rainfall. However, changes in sedimentary biomarker composition, higher total organic carbon content and less negative delta C-13 values of the 1,15-C-32 diol indicate enhanced algal growth during wetter periods. We find that these conditions result in less negative delta D values of n-alkyl diols. We hypothesize that due to higher lipid demand during enhanced algal growth, an increasing proportion of hydrogen for lipid synthesis is derived from the cytosol via oxidation of polysaccharides, which may cause a deuterium enrichment of the acetogenic compounds. This study has significant implications for paleohydrological reconstructions using algal lipid delta D values, particularly in highly seasonal environments such as Isabel Lake. In such environments, delta D values of specific algal lipid biomarkers may not record the full seasonal cycle in source water delta D but appear to be mainly controlled by the physiological state of algal populations. Our data provide the first evidence that changes in D/H fractionation due to algal growth conditions can be recorded in sediments. For paleoclimate reconstructions in such environments, algal growth conditions should be constrained with additional proxy data (delta C-13 values of the same biomarkers), as the net D/H fractionation between water and lipids may not have been constant over time.}, language = {en} } @article{NguyenSchippersGoniRamosetal.2013, author = {Nguyen, Hung M. and Schippers, Jos H. M. and Goni-Ramos, Oscar and Christoph, Mathias P. and Dortay, Hakan and van der Hoorn, Renier A. L. and M{\"u}ller-R{\"o}ber, Bernd}, title = {An upstream regulator of the 26S proteasome modulates organ size in Arabidopsis thaliana}, series = {The plant journal}, volume = {74}, journal = {The plant journal}, number = {1}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0960-7412}, doi = {10.1111/tpj.12097}, pages = {25 -- 36}, year = {2013}, abstract = {In both animal and plant kingdoms, body size is a fundamental but still poorly understood attribute of biological systems. Here we report that the Arabidopsis NAC transcription factor Regulator of Proteasomal Gene Expression' (RPX) controls leaf size by positively modulating proteasome activity. We further show that the cis-element recognized by RPX is evolutionarily conserved between higher plant species. Upon over-expression of RPX, plants exhibit reduced growth, which may be reversed by a low concentration of the pharmacological proteasome inhibitor MG132. These data suggest that the rate of protein turnover during growth is a critical parameter for determining final organ size.}, language = {en} } @article{BaumannBauer2013, author = {Baumann, Otto and Bauer, Alexandra}, title = {Development of apical membrane organization and V-ATPase regulation in blowfly salivary glands}, series = {The journal of experimental biology}, volume = {216}, journal = {The journal of experimental biology}, number = {7}, publisher = {Company of Biologists Limited}, address = {Cambridge}, issn = {0022-0949}, doi = {10.1242/jeb.077420}, pages = {1225 -- 1234}, year = {2013}, abstract = {Secretory cells in blowfly salivary gland are specialized via morphological and physiological attributes in order to serve their main function, i.e. the transport of solutes at a high rate in response to a hormonal stimulus, namely serotonin (5-HT). This study examines the way that 5-HT-insensitive precursor cells differentiate into morphologically complex 5-HT-responsive secretory cells. By means of immunofluorescence microscopy, immunoblotting and measurements of the transepithelial potential changes, we show the following. (1) The apical membrane of the secretory cells becomes organized into an elaborate system of canaliculi and is folded into pleats during the last pupal day and the first day of adulthood. (2) The structural reorganization of the apical membrane is accompanied by an enrichment of actin filaments and phosphorylated ERM protein (phospho-moesin) at this membrane domain and by the deployment of the membrane-integral part of vacuolar-type H+-ATPase (V-ATPase). These findings suggest a role for phospho-moesin, a linker between actin filaments and membrane components, in apical membrane morphogenesis. (3) The assembly and activation of V-ATPase can be induced immediately after eclosion by way of 8-CPT-cAMP, a membrane-permeant cAMP analogue. (4) 5-HT, however, produces the assembly and activation of V-ATPase only in flies aged for at least 2 h after eclosion, indicating that, at eclosion, the 5-HT receptor/adenylyl cyclase/cAMP signalling pathway is inoperative upstream of cAMP. (5) 5-HT activates both the Ca2+ signalling pathway and the cAMP signalling cascade in fully differentiated secretory cells. However, the functionality of these signalling cascades does not seem to be established in a tightly coordinated manner during cell differentation.}, language = {en} } @article{MartinJagerNisbetetal.2013, author = {Martin, Benjamin T. and Jager, Tjalling and Nisbet, Roger M. and Preuss, Thomas G. and Hammers-Wirtz, Monika and Grimm, Volker}, title = {Extrapolating ecotoxicological effects from individuals to populations - a generic approach based on Dynamic Energy Budget theory and individual-based modeling}, series = {Ecotoxicology}, volume = {22}, journal = {Ecotoxicology}, number = {3}, publisher = {Springer}, address = {Dordrecht}, issn = {0963-9292}, doi = {10.1007/s10646-013-1049-x}, pages = {574 -- 583}, year = {2013}, abstract = {Individual-based models (IBMs) predict how dynamics at higher levels of biological organization emerge from individual-level processes. This makes them a particularly useful tool for ecotoxicology, where the effects of toxicants are measured at the individual level but protection goals are often aimed at the population level or higher. However, one drawback of IBMs is that they require significant effort and data to design for each species. A solution would be to develop IBMs for chemical risk assessment that are based on generic individual-level models and theory. Here we show how one generic theory, Dynamic Energy Budget (DEB) theory, can be used to extrapolate the effect of toxicants measured at the individual level to effects on population dynamics. DEB is based on first principles in bioenergetics and uses a common model structure to model all species. Parameterization for a certain species is done at the individual level and allows to predict population-level effects of toxicants for a wide range of environmental conditions and toxicant concentrations. We present the general approach, which in principle can be used for all animal species, and give an example using Daphnia magna exposed to 3,4-dichloroaniline. We conclude that our generic approach holds great potential for standardized ecological risk assessment based on ecological models. Currently, available data from standard tests can directly be used for parameterization under certain circumstances, but with limited extra effort standard tests at the individual would deliver data that could considerably improve the applicability and precision of extrapolation to the population level. Specifically, the measurement of a toxicant's effect on growth in addition to reproduction, and presenting data over time as opposed to reporting a single EC50 or dose response curve at one time point.}, language = {en} } @article{TikhonenkoMagidsonGraefetal.2013, author = {Tikhonenko, Irina and Magidson, Valentin and Gr{\"a}f, Ralph and Khodjakov, Alexey and Koonce, Michael P.}, title = {A kinesin-mediated mechanism that couples centrosomes to nuclei}, series = {Cellular and molecular life sciences}, volume = {70}, journal = {Cellular and molecular life sciences}, number = {7}, publisher = {Springer}, address = {Basel}, issn = {1420-682X}, doi = {10.1007/s00018-012-1205-0}, pages = {1285 -- 1296}, year = {2013}, abstract = {The M-type kinesin isoform, Kif9, has recently been implicated in maintaining a physical connection between the centrosome and nucleus in Dictyostelium discoideum. However, the mechanism by which Kif9 functions to link these two organelles remains obscure. Here we demonstrate that the Kif9 protein is localized to the nuclear envelope and is concentrated in the region underlying the centrosome point of attachment. Nuclear anchorage appears mediated through a specialized transmembrane domain located in the carboxyl terminus. Kif9 interacts with microtubules in in vitro binding assays and effects an endwise depolymerization of the polymer. These results suggest a model whereby Kif9 is anchored to the nucleus and generates a pulling force that reels the centrosome up against the nucleus. This is a novel activity for a kinesin motor, one important for progression of cells into mitosis and to ensure centrosome-nuclear parity in a multinuclear environment.}, language = {en} } @article{Andree2013, author = {Andree, Kai}, title = {A note on merger in mixed duopoly - Bertrand versus Cournot}, series = {Journal of economics}, volume = {108}, journal = {Journal of economics}, number = {3}, publisher = {Springer}, address = {Wien}, issn = {0931-8658}, doi = {10.1007/s00712-012-0280-x}, pages = {291 -- 298}, year = {2013}, abstract = {In this note we analyze the incentives to merge in a mixed duopoly if firms compete in prices or quantities. Our model framework mainly follows Barcena-Ruiz and Garzon (J Econ 80:27-42, 2003) who set up the model with quantity competition. We extend their analysis by analyzing the case of competition in prices. Further we compare the incentives to merge with Bertrand and Cournot competition. Comparing quantity with price competition we can show that a merger is more likely with Cournot competition than with Bertrand competition.}, language = {en} } @article{RaufArifDortayetal.2013, author = {Rauf, Mamoona and Arif, Muhammad and Dortay, Hakan and Matallana-Ramirez, Lilian P. and Waters, Mark T. and Nam, Hong Gil and Lim, Pyung-Ok and M{\"u}ller-R{\"o}ber, Bernd and Balazadeh, Salma}, title = {ORE1 balances leaf senescence against maintenance by antagonizing G2-like-mediated transcription}, series = {EMBO reports}, volume = {14}, journal = {EMBO reports}, number = {4}, publisher = {Nature Publ. Group}, address = {London}, issn = {1469-221X}, doi = {10.1038/embor.2013.24}, pages = {382 -- 388}, year = {2013}, abstract = {Leaf senescence is a key physiological process in all plants. Its onset is tightly controlled by transcription factors, of which NAC factor ORE1 (ANAC092) is crucial in Arabidopsis thaliana. Enhanced expression of ORE1 triggers early senescence by controlling a downstream gene network that includes various senescence-associated genes. Here, we report that unexpectedly ORE1 interacts with the G2-like transcription factors GLK1 and GLK2, which are important for chloroplast development and maintenance, and thereby for leaf maintenance. ORE1 antagonizes GLK transcriptional activity, shifting the balance from chloroplast maintenance towards deterioration. Our finding identifies a new mechanism important for the control of senescence by ORE1.}, language = {en} } @article{SarmentoJeltschThuilleretal.2013, author = {Sarmento, Juliano Sarmento and Jeltsch, Florian and Thuiller, Wilfried and Higgins, Steven and Midgley, Guy F. and Rebelo, Anthony G. and Rouget, Mathieu and Schurr, Frank Martin}, title = {Impacts of past habitat loss and future climate change on the range dynamics of South African Proteaceae}, series = {Diversity \& distributions : a journal of biological invasions and biodiversity}, volume = {19}, journal = {Diversity \& distributions : a journal of biological invasions and biodiversity}, number = {4}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {1366-9516}, doi = {10.1111/ddi.12011}, pages = {363 -- 376}, year = {2013}, abstract = {Aim To assess how habitat loss and climate change interact in affecting the range dynamics of species and to quantify how predicted range dynamics depend on demographic properties of species and the severity of environmental change. Location South African Cape Floristic Region. Methods We use data-driven demographic models to assess the impacts of past habitat loss and future climate change on range size, range filing and abundances of eight species of woody plants (Proteaceae). The species-specific models employ a hybrid approach that simulates population dynamics and long-distance dispersal on top of expected spatio-temporal dynamics of suitable habitat. Results Climate change was mainly predicted to reduce range size and range filling (because of a combination of strong habitat shifts with low migration ability). In contrast, habitat loss mostly decreased mean local abundance. For most species and response measures, the combination of habitat loss and climate change had the most severe effect. Yet, this combined effect was mostly smaller than expected from adding or multiplying effects of the individual environmental drivers. This seems to be because climate change shifts suitable habitats to regions less affected by habitat loss. Interspecific variation in range size responses depended mostly on the severity of environmental change, whereas responses in range filling and local abundance depended mostly on demographic properties of species. While most surviving populations concentrated in areas that remain climatically suitable, refugia for multiple species were overestimated by simply overlying habitat models and ignoring demography. Main conclusions Demographic models of range dynamics can simultaneously predict the response of range size, abundance and range filling to multiple drivers of environmental change. Demographic knowledge is particularly needed to predict abundance responses and to identify areas that can serve as biodiversity refugia under climate change. These findings highlight the need for data-driven, demographic assessments in conservation biogeography.}, language = {en} } @article{ZoellerHolschneiderHainzl2013, author = {Z{\"o}ller, Gert and Holschneider, Matthias and Hainzl, Sebastian}, title = {The Maximum Earthquake Magnitude in a Time Horizon: Theory and Case Studies}, series = {Bulletin of the Seismological Society of America}, volume = {103}, journal = {Bulletin of the Seismological Society of America}, number = {2A}, publisher = {Seismological Society of America}, address = {Albany}, issn = {0037-1106}, doi = {10.1785/0120120013}, pages = {860 -- 875}, year = {2013}, abstract = {We show how the maximum magnitude within a predefined future time horizon may be estimated from an earthquake catalog within the context of Gutenberg-Richter statistics. The aim is to carry out a rigorous uncertainty assessment, and calculate precise confidence intervals based on an imposed level of confidence a. In detail, we present a model for the estimation of the maximum magnitude to occur in a time interval T-f in the future, given a complete earthquake catalog for a time period T in the past and, if available, paleoseismic events. For this goal, we solely assume that earthquakes follow a stationary Poisson process in time with unknown productivity Lambda and obey the Gutenberg-Richter law in magnitude domain with unknown b-value. The random variables. and b are estimated by means of Bayes theorem with noninformative prior distributions. Results based on synthetic catalogs and on retrospective calculations of historic catalogs from the highly active area of Japan and the low-seismicity, but high-risk region lower Rhine embayment (LRE) in Germany indicate that the estimated magnitudes are close to the true values. Finally, we discuss whether the techniques can be extended to meet the safety requirements for critical facilities such as nuclear power plants. For this aim, the maximum magnitude for all times has to be considered. In agreement with earlier work, we find that this parameter is not a useful quantity from the viewpoint of statistical inference.}, language = {en} } @article{HancockWaeschkeSchumacheretal.2013, author = {Hancock, Christine and W{\"a}schke, Nicole and Schumacher, Uta and Linsenmair, Karl Eduard and Meiners, Torsten and Obermaier, Elisabeth}, title = {Fertilizer application decreases insect abundance on Plantago lanceolata - a large-scale experiment in three geographic regions}, series = {Arthropod-plant interactions : an international journal devoted to studies on interactions of insects, mites, and other arthropods with plants}, volume = {7}, journal = {Arthropod-plant interactions : an international journal devoted to studies on interactions of insects, mites, and other arthropods with plants}, number = {2}, publisher = {Springer}, address = {Dordrecht}, issn = {1872-8855}, doi = {10.1007/s11829-012-9237-9}, pages = {147 -- 158}, year = {2013}, abstract = {Humans have substantially altered the nitrogen cycle of ecosystems through the application of agricultural fertilizer. Fertilization may not only affect plant species diversity, but also insect dynamics by altering plant nitrogen supplies. We investigated the effect of experimental fertilization on the vegetation, with the ribwort plantain as the focal plant, and on higher trophic levels on differently managed grasslands throughout Germany. Over a period of 2 years, we examined two specialist herbivores and their parasitoid on Plantago lanceolata L., and the composition and structure of the surrounding vegetation. Over 70 sites in three geographic regions, within the large-scale project "German Biodiversity Exploratories", were included in the study. The model system consisted of the host plant P. lanceolata L., the monophagous weevils Mecinus labilis Herbst and M. pascuorum Gyllenhal, and their parasitoid Mesopolobus incultus Walker. Fertilization decreased plant species richness and host plant abundance, whereas it enhanced the total vegetation growth. The increased size and heigher leaf nitrogen content did not improve herbivore performance. On the contrary, the abundance of the two herbivores was decreased by fertilization. The parasitoid depended on the abundance of one of its hosts, M. pascuorum (positively density-dependent). Reduced herbivore abundance due to fertilization might be explained by a lower abundance of the host plant, a lower stalk number, and by changed patterns of host localization within higher vegetation. Fertilization negatively affected the third trophic level by cascading up via host abundance. The relationships between fertilization, surrounding vegetation and the tritrophic system were measured throughout the three regions and over the 2-year period. Our findings present consequences of intensification for a plant-herbivore-parasitoid system, and may have significant implications for the conservation of multitrophic systems in managed grasslands.}, language = {en} } @article{MartinJagerNisbetetal.2013, author = {Martin, Benjamin T. and Jager, Tjalling and Nisbet, Roger M. and Preuss, Thomas G. and Grimm, Volker}, title = {Predicting population dynamics from the properties of individuals - a cross-level test of dynamic energy budget theory}, series = {The American naturalist : a bi-monthly journal devoted to the advancement and correlation of the biological sciences}, volume = {181}, journal = {The American naturalist : a bi-monthly journal devoted to the advancement and correlation of the biological sciences}, number = {4}, publisher = {Univ. of Chicago Press}, address = {Chicago}, issn = {0003-0147}, doi = {10.1086/669904}, pages = {506 -- 519}, year = {2013}, abstract = {Individual-based models (IBMs) are increasingly used to link the dynamics of individuals to higher levels of biological organization. Still, many IBMs are data hungry, species specific, and time-consuming to develop and analyze. Many of these issues would be resolved by using general theories of individual dynamics as the basis for IBMs. While such theories have frequently been examined at the individual level, few cross-level tests exist that also try to predict population dynamics. Here we performed a cross-level test of dynamic energy budget (DEB) theory by parameterizing an individual-based model using individual-level data of the water flea, Daphnia magna, and comparing the emerging population dynamics to independent data from population experiments. We found that DEB theory successfully predicted population growth rates and peak densities but failed to capture the decline phase. Further assumptions on food-dependent mortality of juveniles were needed to capture the population dynamics after the initial population peak. The resulting model then predicted, without further calibration, characteristic switches between small-and large-amplitude cycles, which have been observed for Daphnia. We conclude that cross-level tests help detect gaps in current individual-level theories and ultimately will lead to theory development and the establishment of a generic basis for individual-based models and ecology.}, language = {en} } @article{EschenlohrBattiatoMaldonadoetal.2013, author = {Eschenlohr, Andrea and Battiato, Marco and Maldonado, R. and Pontius, N. and Kachel, T. and Holldack, K. and Mitzner, Rolf and F{\"o}hlisch, Alexander and Oppeneer, P. M. and Stamm, C.}, title = {Ultrafast spin transport as key to femtosecond demagnetization}, series = {Nature materials}, volume = {12}, journal = {Nature materials}, number = {4}, publisher = {Nature Publ. Group}, address = {London}, issn = {1476-1122}, doi = {10.1038/NMAT3546}, pages = {332 -- 336}, year = {2013}, abstract = {Irradiating a ferromagnet with a femtosecond laser pulse is known to induce an ultrafast demagnetization within a few hundred femtoseconds. Here we demonstrate that direct laser irradiation is in fact not essential for ultrafast demagnetization, and that electron cascades caused by hot electron currents accomplish it very efficiently. We optically excite a Au/Ni layered structure in which the 30 nm Au capping layer absorbs the incident laser pump pulse and subsequently use the X-ray magnetic circular dichroism technique to probe the femtosecond demagnetization of the adjacent 15 nm Ni layer. A demagnetization effect corresponding to the scenario in which the laser directly excites the Ni film is observed, but with a slight temporal delay. We explain this unexpected observation by means of the demagnetizing effect of a superdiffusive current of non-equilibrium, non-spin-polarized electrons generated in the Au layer.}, language = {en} } @article{LangeBuerkner2013, author = {Lange, Bastian and B{\"u}rkner, Hans-Joachim}, title = {Value creation in scene-based music production - the case of electronic club music in Germany}, series = {Economic geography}, volume = {89}, journal = {Economic geography}, number = {2}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0013-0095}, doi = {10.1111/ecge.12002}, pages = {149 -- 169}, year = {2013}, abstract = {The focus of this article is on the variability of value creation in the popular music industry. Recent trends in electronic music have been based on both the valorization of global tastes and of local specialities in performance and production. Depending on musical styles and market niches, local scenes have become important forces behind heterogeneous globalocal markets. At the same time, technological change and the virtualization of music production and distribution contribute to increasingly differentiated configurations of value creation. It is therefore necessary to reconstruct theoretically and empirically the new interplay among the local music production, digital media markets, and virtual communities that are involved. On the basis of empirical explorations in a German hot spot of electronic club-music production (the city of Berlin), the article indentifies local interaction practice and constellations of stakeholders. The findings show that value creation in these rapidly changing production scenes has moved away from the large-scale distribution of producer-induced media to audience-induced live performance and interactive soundtrack production. This change involves the rising importance of cultural embeddings such as taste building, reputation building among artists and producers, and local community building. Starting from an open theoretical problematization of value creation with regard to fluid scenes and shifting modes of production, the results of first empirical reconstructions are taken as inputs to an evolving discussion on the configurations of value creation in consumer-based strands of music production.}, language = {en} } @article{FischerRielloGiordanoetal.2013, author = {Fischer, Martin H. and Riello, Marianna and Giordano, Bruno L. and Rusconi, Elena}, title = {Singing numbers ... in cognitive space - a dual-task study of the link between pitch, space, and numbers}, series = {Topics in cognitive science}, volume = {5}, journal = {Topics in cognitive science}, number = {2}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {1756-8757}, doi = {10.1111/tops.12017}, pages = {354 -- 366}, year = {2013}, abstract = {We assessed the automaticity of spatial-numerical and spatial-musical associations by testing their intentionality and load sensitivity in a dual-task paradigm. In separate sessions, 16 healthy adults performed magnitude and pitch comparisons on sung numbers with variable pitch. Stimuli and response alternatives were identical, but the relevant stimulus attribute (pitch or number) differed between tasks. Concomitant tasks required retention of either color or location information. Results show that spatial associations of both magnitude and pitch are load sensitive and that the spatial association for pitch is more powerful than that for magnitude. These findings argue against the automaticity of spatial mappings in either stimulus dimension.}, language = {en} } @article{ZhouKlieglYan2013, author = {Zhou, Wei and Kliegl, Reinhold and Yan, Ming}, title = {A validation of parafoveal semantic information extraction in reading Chinese}, series = {Journal of research in reading : a journal of the United Kingdom Reading Association}, volume = {36}, journal = {Journal of research in reading : a journal of the United Kingdom Reading Association}, number = {2}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0141-0423}, doi = {10.1111/j.1467-9817.2013.01556.x}, pages = {S51 -- S63}, year = {2013}, abstract = {Parafoveal semantic processing has recently been well documented in reading Chinese sentences, presumably because of language-specific features. However, because of a large variation of fixation landing positions on pretarget words, some preview words actually were located in foveal vision when readers' eyes landed close to the end of the pretarget words. None of the previous studies has completely ruled out a possibility that the semantic preview effects might mainly arise from these foveally processed preview words. This case, whether previously observed positive evidence for parafoveal semantic processing can still hold, has been called into question. Using linear mixed models, we demonstrate in this study that semantic preview benefit from word N+1 decreased if fixation on pretarget word N was close to the preview. We argue that parafoveal semantic processing is not a consequence of foveally processed preview words.}, language = {en} } @article{WangFritzschBernardingetal.2013, author = {Wang, Jing and Fritzsch, Claire and Bernarding, Johannes and Holtze, Susanne and Mauritz, Karl-Heinz and Brunetti, Maddalena and Dohle, Christian}, title = {A comparison of neural mechanisms in mirror therapy and movement observation therapy}, series = {Journal of rehabilitation medicine : official journal of the UEMS European Board of Physical and Rehabilitation Medicine}, volume = {45}, journal = {Journal of rehabilitation medicine : official journal of the UEMS European Board of Physical and Rehabilitation Medicine}, number = {4}, publisher = {Foundation for Rehabilitation Information}, address = {Uppsala}, issn = {1650-1977}, doi = {10.2340/16501977-1127}, pages = {410 -- 413}, year = {2013}, abstract = {Objective: To compare lateralized cerebral activations elicited during self-initiated movement mirroring and observation of movements. Subjects: A total of 15 right-handed healthy subjects, age range 22-56 years. Methods: Functional imaging study comparing movement mirroring with movement observation, in both hands, in an otherwise identical setting. Imaging data were analysed using statistical parametric mapping software, with significance threshold set at p<0.01 (false discovery rate) and a minimum cluster size of 20 voxels. Results: Movement mirroring induced additional activation in primary and higher-order visual areas strictly contralateral to the limb seen by the subject. There was no significant difference of brain activity when comparing movement observation of somebody else's right hand with left hand. Conclusion: Lateralized cerebral activations are elicited by inversion of visual feedback (movement mirroring), but not by movement observation.}, language = {en} } @article{FeigenbaumMcCurdyFrenzel2013, author = {Feigenbaum, Anna and McCurdy, Patrick and Frenzel, Fabian}, title = {Towards a method for studying affect in (micro)politics - the Campfire Chats Project and the Occupy movement}, series = {Parallax}, volume = {19}, journal = {Parallax}, number = {2}, publisher = {Routledge, Taylor \& Francis Group}, address = {Abingdon}, issn = {1353-4645}, doi = {10.1080/13534645.2013.778493}, pages = {21 -- 37}, year = {2013}, language = {en} } @article{HamannTronickeSteelmanetal.2013, author = {Hamann, G{\"o}ran and Tronicke, Jens and Steelman, Colby M. and Endres, Anthony L.}, title = {Spectral velocity analysis for the determination of ground-wave velocities and their uncertainties in multi-offset GPR data}, series = {Near surface geophysics}, volume = {11}, journal = {Near surface geophysics}, number = {2}, publisher = {European Association of Geoscientists \& Engineers}, address = {Houten}, issn = {1569-4445}, doi = {10.3997/1873-0604.2012038}, pages = {167 -- 176}, year = {2013}, abstract = {In many hydrological applications, ground-wave velocity measurements are increasingly used to map and monitor shallow soil water content. In this study, we propose an automated spectral velocity analysis method to determine the direct ground-wave (DGW) velocity from common midpoint (CMP) or multi-offset ground-penetrating radar (GPR) data. The method introduced in this paper is a variation of the well-known spectral velocity analysis for seismic and GPR reflection events where velocity spectra are computed using different coherency measures along hyperbolas following the normal moveout model. Here, the unnormalized cross-correlation is computed between waveforms across data gathers that are corrected with a linear moveout equation using a predefined range of velocities. Peaks in the resulting velocity spectra identify linear events in the GPR data gathers like DGW events and allow for estimating the corresponding velocities. In addition to obtaining a DGW velocity measurement, we propose a robust method to estimate the associated velocity uncertainties based on the width of the peak in the calculated velocity spectrum. Our proposed method is tested on synthetic data examples to evaluate the influence of subsurface velocity, surveying geometry and signal frequency on the accuracy of estimated ground-wave velocities. In addition, we investigate the influence of such velocity uncertainties on subsequent soil water content estimates using an established petrophysical relationship. Furthermore, we apply our approach to analyse field data, which were collected across a test site in Canada to monitor a wide range of seasonal soil moisture variations. A comparison between our spectral velocity estimates and results derived from manually picked ground-wave arrivals shows good agreement, which illustrates that our spectral velocity analysis is a feasible tool to analyse DGW arrivals in multi-offset GPR data gathers in an objective and more automated manner.}, language = {en} } @article{BeckHollowaySchwanghart2013, author = {Beck, Jan and Holloway, Jeremy D. and Schwanghart, Wolfgang}, title = {Undersampling and the measurement of beta diversity}, series = {Methods in ecology and evolution : an official journal of the British Ecological Society}, volume = {4}, journal = {Methods in ecology and evolution : an official journal of the British Ecological Society}, number = {4}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {2041-210X}, doi = {10.1111/2041-210x.12023}, pages = {370 -- 382}, year = {2013}, abstract = {Beta diversity is a conceptual link between diversity at local and regional scales. Various additional methodologies of quantifying this and related phenomena have been applied. Among them, measures of pairwise (dis)similarity of sites are particularly popular. Undersampling, i.e. not recording all taxa present at a site, is a common situation in ecological data. Bias in many metrics related to beta diversity must be expected, but only few studies have explicitly investigated the properties of various measures under undersampling conditions. On the basis of an empirical data set, representing near-complete local inventories of the Lepidoptera from an isolated Pacific island, as well as simulated communities with varying properties, we mimicked different levels of undersampling. We used 14 different approaches to quantify beta diversity, among them dataset-wide multiplicative partitioning (i.e. true beta diversity') and pairwise site x site dissimilarities. We compared their values from incomplete samples to true results from the full data. We used these comparisons to quantify undersampling bias and we calculated correlations of the dissimilarity measures of undersampled data with complete data of sites. Almost all tested metrics showed bias and low correlations under moderate to severe undersampling conditions (as well as deteriorating precision, i.e. large chance effects on results). Measures that used only species incidence were very sensitive to undersampling, while abundance-based metrics with high dependency on the distribution of the most common taxa were particularly robust. Simulated data showed sensitivity of results to the abundance distribution, confirming that data sets of high evenness and/or the application of metrics that are strongly affected by rare species are particularly sensitive to undersampling. The class of beta measure to be used should depend on the research question being asked as different metrics can lead to quite different conclusions even without undersampling effects. For each class of metric, there is a trade-off between robustness to undersampling and sensitivity to rare species. In consequence, using incidence-based metrics carries a particular risk of false conclusions when undersampled data are involved. Developing bias corrections for such metrics would be desirable.}, language = {en} } @article{DieckmannAhmedSarrietal.2013, author = {Dieckmann, M. E. and Ahmed, H. and Sarri, G. and Doria, D. and Kourakis, I. and Romagnani, L. and Pohl, Martin and Borghesi, M.}, title = {Parametric study of non-relativistic electrostatic shocks and the structure of their transition layer}, series = {Physics of plasmas}, volume = {20}, journal = {Physics of plasmas}, number = {4}, publisher = {American Institute of Physics}, address = {Melville}, issn = {1070-664X}, doi = {10.1063/1.4801447}, pages = {10}, year = {2013}, abstract = {Nonrelativistic electrostatic unmagnetized shocks are frequently observed in laboratory plasmas and they are likely to exist in astrophysical plasmas. Their maximum speed, expressed in units of the ion acoustic speed far upstream of the shock, depends only on the electron-to-ion temperature ratio if binary collisions are absent. The formation and evolution of such shocks is examined here for a wide range of shock speeds with particle-in-cell simulations. The initial temperatures of the electrons and the 400 times heavier ions are equal. Shocks form on electron time scales at Mach numbers between 1.7 and 2.2. Shocks with Mach numbers up to 2.5 form after tens of inverse ion plasma frequencies. The density of the shock-reflected ion beam increases and the number of ions crossing the shock thus decreases with an increasing Mach number, causing a slower expansion of the downstream region in its rest frame. The interval occupied by this ion beam is on a positive potential relative to the far upstream. This potential pre-heats the electrons ahead of the shock even in the absence of beam instabilities and decouples the electron temperature in the foreshock ahead of the shock from the one in the far upstream plasma. The effective Mach number of the shock is reduced by this electron heating. This effect can potentially stabilize nonrelativistic electrostatic shocks moving as fast as supernova remnant shocks.}, language = {en} } @article{KoenigReschkeWolteretal.2013, author = {K{\"o}nig, Niklas and Reschke, Antje and Wolter, Martin and M{\"u}ller, Steffen and Mayer, Frank and Baur, Heiner}, title = {Plantar pressure trigger for reliable nerve stimulus application during dynamic H-reflex measurements}, series = {Gait \& posture}, volume = {37}, journal = {Gait \& posture}, number = {4}, publisher = {Elsevier}, address = {Clare}, issn = {0966-6362}, doi = {10.1016/j.gaitpost.2012.09.021}, pages = {637 -- 639}, year = {2013}, abstract = {In dynamic H-reflex measurements, the standardisation of the nerve stimulation to the gait cycle is crucial to avoid misinterpretation due to altered pre-synaptic inhibition. In this pilot study, a plantar pressure sole was used to trigger the stimulation of the tibialis nerve with respect to the gait cycle. Consequently, the intersession reliability of the soleus muscle H-reflex during treadmill walking was investigated. Seven young participants performed walking trials on a treadmill at 5 km/h. The stimulating electrode was placed on the tibial nerve in the popliteal fossa. An EMG was recorded from the soleus muscle. To synchronize the stimulus to the gait cycle, initial heel strike was detected with a plantar pressure sole. Maximum H-reflex amplitude and M-wave amplitude were obtained and the Hmax/Mmax ratio was calculated. Data reveals excellent reliability, ICC = 0.89. Test-retest variability was 13.0\% (+/- 11.8). The Bland-Altman analysis showed a systematic error of 2.4\%. The plantar pressure sole was capable of triggering the stimulation of the tibialis nerve in a reliable way and offers a simple technique for the evaluation of reflex activity during walking.}, language = {en} } @article{AbramowskiAceroAkhperjanianetal.2013, author = {Abramowski, Attila and Acero, F. and Akhperjanian, A. G. and Anton, Gisela and Balenderan, Shangkari and Balzer, Arnim and Barnacka, Anna and Becherini, Yvonne and Tjus, J. Becker and Behera, B. and Bernl{\"o}hr, K. and Birsin, E. and Biteau, Jonathan and Bochow, A. and Boisson, Catherine and Bolmont, J. and Bordas, Pol and Brucker, J. and Brun, Francois and Brun, Pierre and Bulik, Tomasz and Carrigan, Svenja and Casanova, Sabrina and Cerruti, M. and Chadwick, Paula M. and Chaves, Ryan C. G. and Cheesebrough, A. and Colafrancesco, Sergio and Cologna, Gabriele and Conrad, Jan and Couturier, C. and Dalton, M. and Daniel, M. K. and Davids, I. D. and Degrange, B. and Deil, C. and deWilt, P. and Dickinson, H. J. and Djannati-Ata{\"i}, A. and Domainko, W. and Drury, L. O\&rsquo and C., and Dubus, G. and Dutson, K. and Dyks, J. and Dyrda, M. and Egberts, Kathrin and Eger, P. and Espigat, P. and Fallon, L. and Farnier, C. and Fegan, S. and Feinstein, F. and Fernandes, M. V. and Fernandez, D. and Fiasson, A. and Fontaine, G. and Foerster, A. and Fussling, Matthias and Gajdus, M. and Gallant, Y. A. and Garrigoux, T. and Gast, H. and Giebels, B. and Glicenstein, J. F. and Glueck, B. and Goering, D. and Grondin, M. -H. and Grudzinska, M. and Haeffner, S. and Hague, J. D. and Hahn, J. and Hampf, D. and Harris, J. and Heinz, S. and Heinzelmann, G. and Henri, G. and Hermann, G. and Hillert, A. and Hinton, James Anthony and Hofmann, W. and Hofverberg, P. and Holler, M. and Horns, D. and Jacholkowska, A. and Jahn, C. and Jamrozy, M. and Jung, I. and Kastendieck, M. A. and Katarzynski, K. and Katz, U. and Kaufmann, S. and Khelifi, B. and Klepser, S. and Klochkov, D. and Kluzniak, W. and Kneiske, T. and Kolitzus, D. and Komin, Nu and Kosack, K. and Kossakowski, R. and Krayzel, F. and Krueger, P. P. and Laffon, H. and Lamanna, G. and Lefaucheur, J. and Lemoine-Goumard, M. and Lenain, J. -P. and Lennarz, D. and Lohse, T. and Lopatin, A. and Lu, C. -C. and Marandon, V. and Marcowith, Alexandre and Masbou, J. and Maurin, G. and Maxted, N. and Mayer, M. and McComb, T. J. L. and Medina, M. C. and Mehault, J. and Menzler, U. and Moderski, R. and Mohamed, M. and Moulin, Emmanuel and Naumann, C. L. and Naumann-Godo, M. and de Naurois, M. and Nedbal, D. and Nguyen, N. and Niemiec, J. and Nolan, S. J. and Ohm, S. and Wilhelmi, E. de Ona and Opitz, B. and Ostrowski, M. and Oya, I. and Panter, M. and Parsons, R. D. and Arribas, M. Paz and Pekeur, N. W. and Pelletier, G. and Perez, J. and Petrucci, P. -O. and Peyaud, B. and Pita, S. and Puehlhofer, G. and Punch, M. and Quirrenbach, A. and Raab, S. and Raue, M. and Reimer, A. and Reimer, O. and Renaud, M. and de los Reyes, R. and Rieger, F. and Ripken, J. and Rob, L. and Rosier-Lees, S. and Rowell, G. and Rudak, B. and Rulten, C. B. and Sahakian, V. and Sanchez, David M. and Santangelo, Andrea and Schlickeiser, R. and Schulz, A. and Schwanke, U. and Schwarzburg, S. and Schwemmer, S. and Sheidaei, F. and Skilton, J. L. and Sol, H. and Spengler, G. and Stawarz, L. and Steenkamp, R. and Stegmann, Christian and Stinzing, F. and Stycz, K. and Sushch, Iurii and Szostek, A. and Tavernet, J. -P. and Terrier, R. and Tluczykont, M. and Trichard, C. and Valerius, K. and van Eldik, C. and Vasileiadis, G. and Venter, C. and Viana, A. and Vincent, P. and Voelk, H. J. and Volpe, F. and Vorobiov, S. and Vorster, M. and Wagner, S. J. and Ward, M. and White, R. and Wierzcholska, A. and Wouters, D. and Zacharias, M. and Zajczyk, A. and Zdziarski, A. A. and Zech, Alraune and Zechlin, H. -S. and Pelat, D.}, title = {Discovery of TeV gamma-ray emission from PKS 0447-439 and derivation of an upper limit on its redshift}, series = {ASTRONOMY \& ASTROPHYSICS}, volume = {552}, journal = {ASTRONOMY \& ASTROPHYSICS}, number = {4}, publisher = {EDP SCIENCES S A}, address = {LES ULIS CEDEX A}, organization = {HESS Collaboration}, issn = {0004-6361}, doi = {10.1051/0004-6361/201321108}, pages = {14}, year = {2013}, abstract = {Very high-energy gamma-ray emission from PKS 0447-439 was detected with the H. E. S. S. Cherenkov telescope array in December 2009. This blazar is one of the brightest extragalactic objects in the Fermi bright source list and has a hard spectrum in the MeV to GeV range. In the TeV range, a photon index of 3.89 +/- 0.37 (stat) +/- 0.22 (sys) and a flux normalisation at 1 TeV, phi(1) (TeV) = (3.5 +/- 1.1(stat) +/- 0.9(sys)) x 10(-13) cm(-2) s(-1) TeV-1 were found. The detection with H. E. S. S. triggered observations in the X-ray band with the Swift and RXTE telescopes. Simultaneous UV and optical data from Swift UVOT and data from the optical telescopes ATOM and ROTSE are also available. The spectrum and light curve measured with H. E. S. S. are presented and compared to the multi-wavelength data at lower energies. A rapid flare is seen in the Swift XRT and RXTE data, together with a flux variation in the UV band, at a time scale of the order of one day. A firm upper limit of z < 0.59 on the redshift of PKS 0447-439 is derived from the combined Fermi-LAT and H. E. S. S. data, given the assumptions that there is no upturn in the intrinsic spectrum above the Fermi-LAT energy range and that absorption on the extragalactic background light (EBL) is not weaker than the lower limit provided by current models. The spectral energy distribution is well described by a simple one-zone synchrotron self-Compton scenario, if the redshift of the source is less than z less than or similar to 0.4.}, language = {en} } @article{JagdhuberHajnsekBronstertetal.2013, author = {Jagdhuber, Thomas and Hajnsek, Irena and Bronstert, Axel and Papathanassiou, Konstantinos Panagiotis}, title = {Soil moisture estimation under low vegetation cover using a multi-angular polarimetric decomposition}, series = {IEEE transactions on geoscience and remote sensing}, volume = {51}, journal = {IEEE transactions on geoscience and remote sensing}, number = {4}, publisher = {Inst. of Electr. and Electronics Engineers}, address = {Piscataway}, issn = {0196-2892}, doi = {10.1109/TGRS.2012.2209433}, pages = {2201 -- 2215}, year = {2013}, abstract = {The estimation of volumetric soil moisture under low agricultural vegetation from fully polarimetric synthetic aperture radar (SAR) data at L-band using a multi-angular polarimetric decomposition is investigated. Radar polarimetry provides the framework to decompose the backscattered signal into different canonical scattering mechanisms referring to scattering contributions from the underlying soil and the vegetation cover. Multiangular observation diversity further increases the information space for soil moisture inversion enabling higher inversion rates and a stable inversion performance. The developed approach was applied on the multi-angular L-band data set acquired by German Aerospace Center's ESAR sensor as part of the OPAQUE campaign in 2008. The obtained results are compared against ground measurements collected by the OPAQUE team over a variety of vegetated agricultural fields. The validation of the estimated against ground measured soil moisture results in an root mean square error level of 6-8 vol.\% including all test fields with a variety of crop types.}, language = {en} } @article{MartinMartinGomezRivasBoverArnaletal.2013, author = {Martin-Martin, J. D. and Gomez-Rivas, E. and Bover-Arnal, T. and Trave, A. and Salas, R. and Moreno-Bedmar, J. A. and Tomas, S. and Corbella, M. and Teixell, A. and Verges, J. and Stafford, S. L.}, title = {The Upper Aptian to Lower Albian syn-rift carbonate succession of the southern Maestrat Basin (Spain): Facies architecture and fault-controlled stratabound dolostones}, series = {CRETACEOUS RESEARCH}, volume = {41}, journal = {CRETACEOUS RESEARCH}, number = {4}, publisher = {ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD}, address = {LONDON}, issn = {0195-6671}, doi = {10.1016/j.cretres.2012.12.008}, pages = {217 -- 236}, year = {2013}, abstract = {Syn-rift shallow-marine carbonates of Late Aptian to Early Albian age in the southern Maestrat Basin (E Spain) register the thickest Aptian sedimentary record of the basin, and one of the most complete carbonate successions of this age reported in the northern Tethyan margin. The host limestones (Benassal Formation) are partially replaced by dolostones providing a new case study of fault-controlled hydrothermal dolomitization. The syn-rift sediments filled a graben controlled by normal basement faults. The Benassal Fm was deposited in a carbonate ramp with scarce siliciclastic input. The lithofacies are mainly characterized by the presence of orbitolinid foraminifera, corals and rudist bivalves fauna. The succession is stacked in three transgressive-regressive sequences (T-R) bounded by surfaces with sequence stratigraphic significance. The third sequence, which is reported for the first time in the basin, is formed by fully marine lithofacies of Albian age and represents the marine equivalent to the continental deposits of the Escucha Fm in the rest of the basin. The dolomitization of the host rock is spatially associated with the basement faults, and thus is fault-controlled. The dolostone forms seismic-scale stratabound tabular geobodies that extend several kilometres away from the fault zones, mostly in the hanging wall blocks, and host Mississippi Valley Type (MVT) deposits. The dolostones preferentially replaced middle to inner ramp grain-dominated fades from the third T-R sequences consisting of bioclastic packestones and peloidal grainstones. Field and petrology data indicate that the replacement took place after early calcite cementation and compaction, most likely during the Late Cretaceous post-rift stage of the basin. The dolostone registers the typical hydrothermal paragenesis constituted by the host limestone replacement, dolomite cementation and sulfide MVT mineralization. The Aptian succession studied provides a stratigraphic framework that can be used for oil exploration in age-equivalent rocks, especially in the Valencia Trough, offshore Spain. Moreover, this new case study constitutes a world class outcrop analogue for similar partially stratabound, dolomitized limestone reservoirs worldwide. (c) 2013 Elsevier Ltd. All rights reserved.}, language = {en} } @article{HeydariFlehrStumpe2013, author = {Heydari, Esmaeil and Flehr, Roman and Stumpe, Joachim}, title = {Influence of spacer layer on enhancement of nanoplasmon-assisted random lasing}, series = {Applied physics letters}, volume = {102}, journal = {Applied physics letters}, number = {13}, publisher = {American Institute of Physics}, address = {Melville}, issn = {0003-6951}, doi = {10.1063/1.4800776}, pages = {4}, year = {2013}, abstract = {Threshold reduction and emission enhancement are reported for a gold nanoparticle-based waveguided random laser, exploiting the localized surface plasmon resonance excitation. It was experimentally found that a proper thickness of the spacer layer between the gold nanoparticles and the gain layer enhances the random laser performance. It tunes the coupling between the gain polymer and the gold nanoparticles and avoids the quenching of emission in close contact to the gold nanoparticles which is considered as one of the main sources of loss in the current laser system. (C) 2013 American Institute of Physics. [http://dx.doi.org/10.1063/1.4800776]}, language = {en} } @article{Schiefele2013, author = {Schiefele, Ulrich}, title = {Response to engeser (2012) on the nature of flow experience}, series = {Psychological reports}, volume = {112}, journal = {Psychological reports}, number = {2}, publisher = {Sage Publ.}, address = {Missoula}, issn = {0033-2941}, doi = {10.2466/04.PR0.112.2.529-532}, pages = {529 -- 532}, year = {2013}, abstract = {Engeser (2012) argued that the experience of flow is multifaceted and can only be measured validly by taking into account all relevant components. Although the possibility that flow includes several components cannot be excluded, there is weak evidence for Engeser's proposition. In support of a unidimensional interpretation of flow, theoretical, methodological, and empirical arguments are presented.}, language = {en} } @article{TodtKniazevGvaramadzeetal.2013, author = {Todt, Helge Tobias and Kniazev, A. Y. and Gvaramadze, V. V. and Hamann, Wolf-Rainer and Buckley, D. and Crause, L. and Crawford, S. M. and Gulbis, A. A. S. and Hettlage, C. and Hooper, E. and Husser, T. -O. and Kotze, P. and Loaring, N. and Nordsieck, K. H. and O'Donoghue, D. and Pickering, T. and Potter, S. and Romero-Colmenero, E. and Vaisanen, P. and Williams, T. and Wolf, M.}, title = {Abell 48-a rare WN-type central star of a planetary nebula}, series = {Monthly notices of the Royal Astronomical Society}, volume = {430}, journal = {Monthly notices of the Royal Astronomical Society}, number = {3}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {0035-8711}, doi = {10.1093/mnras/stt056}, pages = {2302 -- 2312}, year = {2013}, abstract = {A considerable fraction of the central stars of planetary nebulae (CSPNe) are hydrogen-deficient. Almost all of these H-deficient central stars (CSs) display spectra with strong carbon and helium lines. Most of them exhibit emission-line spectra resembling those of massive WC stars. Therefore these stars are classed as CSPNe of spectral type [WC]. Recently, quantitative spectral analysis of two emission-line CSs, PB 8 and IC 4663, revealed that these stars do not belong to the [WC] class. Instead PB 8 has been classified as [WN/WC] type and IC 4663 as [WN] type. In this work we report the spectroscopic identification of another rare [WN] star, the CS of Abell 48. We performed a spectral analysis of Abell 48 with the Potsdam Wolf-Rayet (PoWR) models for expanding atmospheres. We find that the expanding atmosphere of Abell 48 is mainly composed of helium (85 per cent by mass), hydrogen (10 per cent) and nitrogen (5 per cent). The residual hydrogen and the enhanced nitrogen abundance make this object different from the other [WN] star IC 4663. We discuss the possible origin of this atmospheric composition.}, language = {en} } @article{StrightBernhardtBoucher2013, author = {Stright, Lisa and Bernhardt, Anne and Boucher, Alexandre}, title = {DFTopoSim modeling topographically-controlled deposition of subseismic scale sandstone packages within a mass transport dominated deep-water channel belt}, series = {Mathematical geosciences : the official journal of the International Association for Mathematical Geosciences}, volume = {45}, journal = {Mathematical geosciences : the official journal of the International Association for Mathematical Geosciences}, number = {3}, publisher = {Springer}, address = {Heidelberg}, issn = {1874-8961}, doi = {10.1007/s11004-013-9444-7}, pages = {277 -- 296}, year = {2013}, abstract = {Facies bodies in geostatistical models of deep-water depositional environments generally represent channel-levee-overbank-lobe morphologies. Such models adequately capture one set of the erosional and depositional processes resulting from turbidity currents traveling downslope to the ocean basin floor. However, depositional morphologies diverge from the straight forward channel-levee-overbank-lobe paradigm when the topography of the slope or the shape of the basin impacts the timing and magnitude of turbidity current deposition. Subaqueous mass-transport-deposits (MTDs) present the need for an exception to the channel-levee-overbank-lobe archetype. Irregular surface topography of subaqueous MTDs can play a primary role in controlling sand deposition from turbidity currents. MTD topography creates mini-basins in which sand accumulates in irregularly-shaped deposits. These accumulations are difficult to laterally correlate using well-log data due to their variable and unpredictable shape and size. Prediction is further complicated because sandstone bodies typical of this setting are difficult to resolve in seismic-reflection data. An event-based model is presented, called DFTopoSim, which simulates debris flows and turbidity currents. The accommodation space on top of and between debris flow lobes is filled in by sand from turbidity currents. When applied to a subsurface case in the Molasse Basin of Upper Austria, DFTopoSim predicts sand packages consistent with observations from core, well, and seismic data and the interpretation of the sedimentologic processes. DFTopoSim expands the set of available geostatistical deep-water depositional models beyond the standard channel-levee-overbank-lobe model.}, language = {en} } @article{KlenkPieper2013, author = {Klenk, Tanja and Pieper, Jonas}, title = {Accountability in a privatized welfare state the case of the german hospital market}, series = {Administration \& society}, volume = {45}, journal = {Administration \& society}, number = {3}, publisher = {Sage Publ.}, address = {Thousand Oaks}, issn = {0095-3997}, doi = {10.1177/0095399712451890}, pages = {326 -- 356}, year = {2013}, abstract = {One of the most striking features of recent public sector reform in Europe is privatization. This development raises questions of accountability: By whom and for what are managers of private for-profit organizations delivering public goods held accountable? Analyzing accountability mechanisms through the lens of an institutional organizational approach and on the empirical basis of hospital privatization in Germany, the article contributes to the empirical and theoretical understanding of public accountability of private actors. The analysis suggests that accountability is not declining but rather multiplying. The shifts in the locus and content of accountability cause organizational stress for private hospitals.}, language = {en} } @article{ToepferCaldanaGrimbsetal.2013, author = {T{\"o}pfer, Nadine and Caldana, Camila and Grimbs, Sergio and Willmitzer, Lothar and Fernie, Alisdair R. and Nikoloski, Zoran}, title = {Integration of genome-scale modeling and transcript profiling reveals metabolic pathways underlying light and temperature acclimation in arabidopsis}, series = {The plant cell}, volume = {25}, journal = {The plant cell}, number = {4}, publisher = {American Society of Plant Physiologists}, address = {Rockville}, issn = {1040-4651}, doi = {10.1105/tpc.112.108852}, pages = {1197 -- 1211}, year = {2013}, abstract = {Understanding metabolic acclimation of plants to challenging environmental conditions is essential for dissecting the role of metabolic pathways in growth and survival. As stresses involve simultaneous physiological alterations across all levels of cellular organization, a comprehensive characterization of the role of metabolic pathways in acclimation necessitates integration of genome-scale models with high-throughput data. Here, we present an integrative optimization-based approach, which, by coupling a plant metabolic network model and transcriptomics data, can predict the metabolic pathways affected in a single, carefully controlled experiment. Moreover, we propose three optimization-based indices that characterize different aspects of metabolic pathway behavior in the context of the entire metabolic network. We demonstrate that the proposed approach and indices facilitate quantitative comparisons and characterization of the plant metabolic response under eight different light and/or temperature conditions. The predictions of the metabolic functions involved in metabolic acclimation of Arabidopsis thaliana to the changing conditions are in line with experimental evidence and result in a hypothesis about the role of homocysteine-to-Cys interconversion and Asn biosynthesis. The approach can also be used to reveal the role of particular metabolic pathways in other scenarios, while taking into consideration the entirety of characterized plant metabolism.}, language = {en} } @article{WessigMatthesSchildeetal.2013, author = {Wessig, Pablo and Matthes, Annika and Schilde, Uwe and Kelling, Alexandra}, title = {Asymmetric synthesis of (1,5)Naphthalenophanes by Dehydro-Diels-Alder reaction}, series = {European journal of organic chemistry}, journal = {European journal of organic chemistry}, number = {11}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1434-193X}, doi = {10.1002/ejoc.201201594}, pages = {2123 -- 2129}, year = {2013}, abstract = {An asymmetric variant of the dehydro-Diels-Alder (DDA) reaction has been developed and applied in the atropselective synthesis of various (1,5)naphthalenophanes. Whereas the suitability of the photochemically induced DDA (PDDA) was limited, the thermally induced DDA provided the desired product, depending on the chiral auxiliary used and the length of the linker, with nearly perfect stereoselectivity. Furthermore, the mechanism of the DDA was investigated by means of DFT calculations, and a stepwise mechanism involving 1,4-biradicals was suggested.}, language = {en} } @article{RobertsStablerFischeretal.2013, author = {Roberts, Andrew Michael and Stabler, Jane and Fischer, Martin H. and Otty, Lisa}, title = {Space and pattern in linear and postlinear poetry empirical and theoretical approaches}, series = {European journal of English studies : official journal of the European Society for the Study of English (ESSE)}, volume = {17}, journal = {European journal of English studies : official journal of the European Society for the Study of English (ESSE)}, number = {1}, publisher = {Routledge, Taylor \& Francis Group}, address = {Abingdon}, issn = {1382-5577}, doi = {10.1080/13825577.2012.754967}, pages = {23 -- 40}, year = {2013}, abstract = {This article derives from two interdisciplinary research projects funded by the UK Arts and Humanities Research Council, involving the application of psychological experimental techniques to the study of poetic form and reader response. It discusses the semantic and expressive effects of space and pattern in innovative forms of contemporary British and American poetry. After referring to some historical and theoretical contexts for these issues, the article analyses the results of experiments using eye-tracking, manipulations of text, memory tests and readers' recorded responses and interpretations. The first group of poems studied were lineated, with extended spaces within lines and displacement of lines from the left margin. Referring to a poem from Geoffrey Hill'sCanaan(1996), the authors show that such use of space may serve to articulate syntactical structures, but may also promote richer interpretation by encouraging cross-linear semantic connections. The second technique studied was the break from linear into postlinear poetry, as an initially lineated sequence shifts to pages of dispersed text. In readings of Susan Howe'sPythagorean Silence(fromThe Europe of Trusts, 1990), the authors detected more radical effects of space, shape and pattern, with associated consequences for interpretative strategies and aesthetic responses. Finally, the article discusses the potential for both mutual support and heuristic challenge between an empirical study of reader response, and a historical-theoretical approach as exemplified by Jerome McGann's interpretation ofPythagorean Silence.}, language = {en} } @article{FabianKunzMuelleretal.2013, author = {Fabian, Benjamin and Kunz, Steffen and M{\"u}ller, Sebastian and G{\"u}nther, Oliver}, title = {Secure federation of semantic information services}, series = {Decision support systems : DSS ; the international journal}, volume = {55}, journal = {Decision support systems : DSS ; the international journal}, number = {1}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0167-9236}, doi = {10.1016/j.dss.2012.05.049}, pages = {385 -- 398}, year = {2013}, abstract = {fundamental challenge for product-lifecycle management in collaborative value networks is to utilize the vast amount of product information available from heterogeneous sources in order to improve business analytics, decision support, and processes. This becomes even more challenging if those sources are distributed across multiple organizations. Federations of semantic information services, combining service-orientation and semantic technologies, provide a promising solution for this problem. However, without proper measures to establish information security, companies will be reluctant to join an information federation, which could lead to serious adoption barriers. Following the design science paradigm, this paper presents general objectives and a process for designing a secure federation of semantic information services. Furthermore, new as well as established security measures are discussed. Here, our contributions include an access-control enforcement system for semantic information services and a process for modeling access-control policies across organizations. In addition, a comprehensive security architecture is presented. An implementation of the architecture in the context of an application scenario and several performance experiments demonstrate the practical viability of our approach.}, language = {en} } @article{KatayamaAnniyevBeyeetal.2013, author = {Katayama, T. and Anniyev, Toyli and Beye, Martin and Coffee, Ryan and Dell'Angela, M. and F{\"o}hlisch, Alexander and Gladh, J. and Kaya, S. and Krupin, O. and Nilsson, A. and Nordlund, D. and Schlotter, W. F. and Sellberg, J. A. and Sorgenfrei, Nomi and Turner, J. J. and Wurth, W. and {\"O}str{\"o}m, H. and Ogasawara, H.}, title = {Ultrafast soft X-ray emission spectroscopy of surface adsorbates using an X-ray free electron laser}, series = {Journal of electron spectroscopy and related phenomena : the international journal on theoretical and experimental aspects of electron spectroscopy}, volume = {187}, journal = {Journal of electron spectroscopy and related phenomena : the international journal on theoretical and experimental aspects of electron spectroscopy}, number = {1}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0368-2048}, doi = {10.1016/j.elspec.2013.03.006}, pages = {9 -- 14}, year = {2013}, abstract = {We report on an experimental system designed to probe chemical reactions on solid surfaces on a sub-picosecond timescale using soft X-ray emission spectroscopy at the Linac Coherent Light Source (LCLS) free electron laser (FEL) at the SLAC National Accelerator Laboratory. We analyzed the O 1s X-ray emission spectra recorded from atomic oxygen adsorbed on a Ru(0001) surface at a synchrotron beamline (SSRL, BL13-2) and an FEL beamline (LCLS, SXR). We have demonstrated conditions that provide negligible amount of FEL induced damage of the sample. In addition we show that the setup is capable of tracking the temporal evolution of electronic structure during a surface reaction of submonolayer quantities of CO molecules desorbing from the surface.}, language = {en} } @article{NegroBousquetVilsetal.2013, author = {Negro, Francois and Bousquet, Romain and Vils, Flurin and Pellet, Clara-Marine and H{\"a}nggi-Schaub, Jeanette}, title = {Thermal structure and metamorphic evolution of the Piemont-Ligurian metasediments in the northern Western Alps}, series = {Swiss journal of geosciences}, volume = {106}, journal = {Swiss journal of geosciences}, number = {1}, publisher = {Springer}, address = {Basel}, issn = {1661-8726}, doi = {10.1007/s00015-013-0119-7}, pages = {63 -- 78}, year = {2013}, abstract = {In the Western Alps, the Piemont-Ligurian oceanic domain records blueschist to eclogite metamorphic conditions during the Alpine orogeny. This domain is classically divided into two "zones" (Combin and Zermatt-Saas), with contrasting metamorphic evolution, and separated tectonically by the Combin fault. This study presents new metamorphic and temperature (RSCM thermometry) data obtained in Piemont-Ligurian metasediments and proposes a reevaluation of the P-T evolution of this domain. In the upper unit (or "Combin zone") temperatures are in the range of 420-530 A degrees C, with an increase of temperature from upper to lower structural levels. Petrological evidences show that these temperatures are related to the retrograde path and to deformation at greenschist metamorphic conditions. This highlights heating during exhumation of HP metamorphic rocks. In the lower unit (or "Zermatt-Saas zone"), temperatures are very homogeneous in the range of 500-540 A degrees C. This shows almost continuous downward temperature increase in the Piemont-Ligurian domain. The observed thermal structure is interpreted as the result of the upper and lower unit juxtaposition along shear zones at a temperature of similar to 500 A degrees C during the Middle Eocene. This juxtaposition probably occurred at shallow crustal levels (similar to 15-20 km) within a subduction channel. We finally propose that the Piemont-Ligurian Domain should not be viewed as two distinct "zones", but rather as a stack of several tectonic slices.}, language = {en} } @article{ToenjesSokolovPostnikov2013, author = {Toenjes, Ralf and Sokolov, Igor M. and Postnikov, E. B.}, title = {Non-spectral relaxation in one dimensional Ornstein-Uhlenbeck processes}, series = {Physical review letters}, volume = {110}, journal = {Physical review letters}, number = {15}, publisher = {American Physical Society}, address = {College Park}, issn = {0031-9007}, doi = {10.1103/PhysRevLett.110.150602}, pages = {4}, year = {2013}, abstract = {The relaxation of a dissipative system to its equilibrium state often shows a multiexponential pattern with relaxation rates, which are typically considered to be independent of the initial condition. The rates follow from the spectrum of a Hermitian operator obtained by a similarity transformation of the initial Fokker-Planck operator. However, some initial conditions are mapped by this similarity transformation to functions which growat infinity. These cannot be expanded in terms of the eigenfunctions of a Hermitian operator, and show different relaxation patterns. Considering the exactly solvable examples of Gaussian and generalized Levy Ornstein-Uhlenbeck processes (OUPs) we show that the relaxation rates belong to the Hermitian spectrum only if the initial condition belongs to the domain of attraction of the stable distribution defining the noise. While for an ordinary OUP initial conditions leading to nonspectral relaxation can be considered exotic, for generalized OUPs driven by Levy noise, such initial conditions are the rule. DOI: 10.1103/PhysRevLett.110.150602}, language = {en} } @article{BoldtLeberBonaventuraetal.2013, author = {Boldt, Julia and Leber, Alexander W. and Bonaventura, Klaus and Sohns, Christian and Stula, Martin and Huppertz, Alexander and Haverkamp, Wilhelm and Dorenkamp, Marc}, title = {Cost-effectiveness of cardiovascular magnetic resonance and single-photon emission computed tomography for diagnosis of coronary artery disease in Germany}, series = {Journal of cardiovascular magnetic resonance}, volume = {15}, journal = {Journal of cardiovascular magnetic resonance}, number = {30}, publisher = {BioMed Central}, address = {London}, issn = {1097-6647}, doi = {10.1186/1532-429X-15-30}, pages = {11}, year = {2013}, abstract = {Background: Recent studies have demonstrated a superior diagnostic accuracy of cardiovascular magnetic resonance (CMR) for the detection of coronary artery disease (CAD). We aimed to determine the comparative cost-effectiveness of CMR versus single-photon emission computed tomography (SPECT). Methods: Based on Bayes' theorem, a mathematical model was developed to compare the cost-effectiveness and utility of CMR with SPECT in patients with suspected CAD. Invasive coronary angiography served as the standard of reference. Effectiveness was defined as the accurate detection of CAD, and utility as the number of quality-adjusted life-years (QALYs) gained. Model input parameters were derived from the literature, and the cost analysis was conducted from a German health care payer's perspective. Extensive sensitivity analyses were performed. Results: Reimbursement fees represented only a minor fraction of the total costs incurred by a diagnostic strategy. Increases in the prevalence of CAD were generally associated with improved cost-effectiveness and decreased costs per utility unit (Delta QALY). By comparison, CMR was consistently more cost-effective than SPECT, and showed lower costs per QALY gained. Given a CAD prevalence of 0.50, CMR was associated with total costs of (sic)6,120 for one patient correctly diagnosed as having CAD and with (sic)2,246 per Delta QALY gained versus (sic)7,065 and (sic)2,931 for SPECT, respectively. Above a threshold value of CAD prevalence of 0.60, proceeding directly to invasive angiography was the most cost-effective approach. Conclusions: In patients with low to intermediate CAD probabilities, CMR is more cost-effective than SPECT. Moreover, lower costs per utility unit indicate a superior clinical utility of CMR.}, language = {en} } @article{MareljaChowdhuryDoscheetal.2013, author = {Marelja, Zvonimir and Chowdhury, Mita Mullick and Dosche, Carsten and Hille, Carsten and Baumann, Otto and L{\"o}hmannsr{\"o}ben, Hans-Gerd and Leimk{\"u}hler, Silke}, title = {The L-cysteine desulfurase NFS1 is localized in the cytosol where it provides the sulfur for molybdenum cofactor biosynthesis in humans}, series = {PLoS one}, volume = {8}, journal = {PLoS one}, number = {4}, publisher = {PLoS}, address = {San Fransisco}, issn = {1932-6203}, doi = {10.1371/journal.pone.0060869}, pages = {13}, year = {2013}, abstract = {In humans, the L-cysteine desulfurase NFS1 plays a crucial role in the mitochondrial iron-sulfur cluster biosynthesis and in the thiomodification of mitochondrial and cytosolic tRNAs. We have previously demonstrated that purified NFS1 is able to transfer sulfur to the C-terminal domain of MOCS3, a cytosolic protein involved in molybdenum cofactor biosynthesis and tRNA thiolation. However, no direct evidence existed so far for the interaction of NFS1 and MOCS3 in the cytosol of human cells. Here, we present direct data to show the interaction of NFS1 and MOCS3 in the cytosol of human cells using Forster resonance energy transfer and a split-EGFP system. The colocalization of NFS1 and MOCS3 in the cytosol was confirmed by immunodetection of fractionated cells and localization studies using confocal fluorescence microscopy. Purified NFS1 was used to reconstitute the lacking molybdoenzyme activity of the Neurospora crassa nit-1 mutant, giving additional evidence that NFS1 is the sulfur donor for Moco biosynthesis in eukaryotes in general.}, language = {en} } @article{RybskiRosKropp2013, author = {Rybski, Diego and Ros, Anselmo Garcia Cantu and Kropp, J{\"u}rgen}, title = {Distance-weighted city growth}, series = {PHYSICAL REVIEW E}, volume = {87}, journal = {PHYSICAL REVIEW E}, number = {4}, publisher = {AMER PHYSICAL SOC}, address = {COLLEGE PK}, issn = {1539-3755}, doi = {10.1103/PhysRevE.87.042114}, pages = {6}, year = {2013}, abstract = {Urban agglomerations exhibit complex emergent features of which Zipf\’s law, i.e., a power-law size distribution, and fractality may be regarded as the most prominent ones. We propose a simplistic model for the generation of citylike structures which is solely based on the assumption that growth is more likely to take place close to inhabited space. The model involves one parameter which is an exponent determining how strongly the attraction decays with the distance. In addition, the model is run iteratively so that existing clusters can grow (together) and new ones can emerge. The model is capable of reproducing the size distribution and the fractality of the boundary of the largest cluster. Although the power-law distribution depends on both, the imposed exponent and the iteration, the fractality seems to be independent of the former and only depends on the latter. Analyzing land-cover data, we estimate the parameter-value gamma approximate to 2.5 for Paris and its surroundings. DOI: 10.1103/PhysRevE.87.042114}, language = {en} } @article{JeonLeijnseOddershedeetal.2013, author = {Jeon, Jae-Hyung and Leijnse, Natascha and Oddershede, Lene B. and Metzler, Ralf}, title = {Anomalous diffusion and power-law relaxation of the time averaged mean squared displacement in worm-like micellar solutions}, series = {New journal of physics : the open-access journal for physics}, volume = {15}, journal = {New journal of physics : the open-access journal for physics}, number = {4}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1367-2630}, doi = {10.1088/1367-2630/15/4/045011}, pages = {16}, year = {2013}, abstract = {We report the results of single tracer particle tracking by optical tweezers and video microscopy in micellar solutions. From careful analysis in terms of different stochastic models, we show that the polystyrene tracer beads of size 0.52-2.5 mu m after short-time normal diffusion turn over to perform anomalous diffusion of the form < r(2)(t)> similar or equal to t(alpha) with alpha approximate to 0.3. This free anomalous diffusion is ergodic and consistent with a description in terms of the generalized Langevin equation with a power-law memory kernel. With optical tweezers tracking, we unveil a power-law relaxation over several decades in time to the thermal plateau value under the confinement of the harmonic tweezer potential, as predicted previously (Phys. Rev. E 85 021147 (2012)). After the subdiffusive motion in the millisecond range, the motion becomes faster and turns either back to normal Brownian diffusion or to even faster superdiffusion, depending on the size of the tracer beads.}, language = {en} } @article{IsaevaKuznetsovKuznetsov2013, author = {Isaeva, Olga B. and Kuznetsov, Alexey S. and Kuznetsov, Sergey P.}, title = {Hyperbolic chaos of standing wave patterns generated parametrically by a modulated pump source}, series = {Physical review : E, Statistical, nonlinear and soft matter physics}, volume = {87}, journal = {Physical review : E, Statistical, nonlinear and soft matter physics}, number = {4}, publisher = {American Physical Society}, address = {College Park}, issn = {1539-3755}, doi = {10.1103/PhysRevE.87.040901}, pages = {4}, year = {2013}, abstract = {We outline a possibility of hyperbolic chaotic dynamics associated with the expanding circle map for spatial phases of parametrically excited standing wave patterns. The model system is governed by a one-dimensional wave equation with nonlinear dissipation. The phenomenon arises due to the pump modulation providing the alternating excitation of modes with the ratio of characteristic scales 1 : 3. DOI: 10.1103/PhysRevE.87.040901}, language = {en} } @article{ShainyanKirpichenkoKleinpeteretal.2013, author = {Shainyan, Bagrat A. and Kirpichenko, Svetlana V. and Kleinpeter, Erich and Shlykov, Sergey A. and Osadchiy, Dmitriy Yu and Chipanina, Nina N. and Oznobikhina, Larisa P.}, title = {1,3-Dimethy1-3-silapiperidine - synthesis, molecular structure, and conformational analysis by gas-phase electron diffraction, low temperature NMR, IR and Raman Spectroscopy, and quantum chemical calculations}, series = {The journal of organic chemistry}, volume = {78}, journal = {The journal of organic chemistry}, number = {8}, publisher = {American Chemical Society}, address = {Washington}, issn = {0022-3263}, doi = {10.1021/jo400289g}, pages = {3939 -- 3947}, year = {2013}, abstract = {The first Si-H-containing azasilaheterocycle, 1,3-dimethyl-3-silapiperidine 1, was synthesized, and its molecular structure and conformational properties were studied by gas-phase electron diffraction (GED), low temperature NMR, IR and Raman spectroscopy and quantum chemical calculations. The compound exists as a mixture of two conformers possessing the chair conformation with the equatorial NMe group and differing by axial or equatorial position of the SiMe group. In the gas phase, the SiMeax conformer predominates (GED: ax/eq = 65(7):35(7)\%,Delta G = 0.36(18) kcal/mol; IR: ax/eq = 62(5):38(5)\%,Delta G = 0.16(7) kcal/mol). In solution, at 143 k the SiMeeq conformer predominates' in the frozen equilibrium (NMR: ax/eq = 31.5(1.5):68.5(1.5)\%, Delta G = -0.22(2) kcal/mol). Thermodynamic parameters of the ring inversion are determined (Delta G(double dagger) = 8.9-9.0 kcal/mol, Delta H-double dagger = 9.6 kcal/mol, Delta S-double dagger = 2.1 eu). High-level quantum chemical calculations :(MP2, G2, CCSD(T)) nicely reproduce the experimental geometry and the predominance of the axial conformer in the gas phase.}, language = {en} } @article{SchmidtSingleton2013, author = {Schmidt, Hans-J{\"u}rgen and Singleton, Douglas}, title = {Exact radial solution in 2+1 gravity with a real scalar field}, series = {Physics letters : B}, volume = {721}, journal = {Physics letters : B}, number = {4-5}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0370-2693}, doi = {10.1016/j.physletb.2013.03.007}, pages = {294 -- 298}, year = {2013}, abstract = {In this Letter we give some general considerations about circularly symmetric, static space-times in 2 + 1 dimensions, focusing first on the surprising (at the time) existence of the BTZ black hole solution. We show that BTZ black holes and Schwarzschild black holes in 3 + 1 dimensions originate from different definitions of a black hole. There are two by-products of this general discussion: (i) we give a new and simple derivation of (2 + 1)-dimensional Anti-de Sitter (AdS) space-time; (ii) we present an exact solution to (2 + 1)-dimensional gravity coupled to a self-interacting real scalar field. The spatial part of the metric of this solution is flat but the temporal part behaves asymptotically like AdS space-time. The scalar field has logarithmic behavior as one would expect for a massless scalar field in flat space-time. The solution can be compared to gravitating scalar field solutions in 3 + 1 dimensions but with certain oddities connected with the (2 + 1)-dimensional character of the space-time. The solution is unique to 2 + 1 dimensions; it does not carry over to 3 + 1 dimensions.}, language = {en} } @article{PavesiTiedemannDeMatthaeisetal.2013, author = {Pavesi, Laura and Tiedemann, Ralph and De Matthaeis, Elvira and Ketmaier, Valerio}, title = {Genetic connectivity between land and sea - the case of the beachflea Orchestia montagui (Crustacea, Amphipoda, Talitridae) in the Mediterranean Sea}, series = {Frontiers in zoology}, volume = {10}, journal = {Frontiers in zoology}, number = {4-5}, publisher = {BioMed Central}, address = {London}, issn = {1742-9994}, doi = {10.1186/1742-9994-10-21}, pages = {19}, year = {2013}, abstract = {Introduction: We examined patterns of genetic divergence in 26 Mediterranean populations of the semi-terrestrial beachflea Orchestia montagui using mitochondrial (cytochrome oxidase subunit I), microsatellite (eight loci) and allozymic data. The species typically forms large populations within heaps of dead seagrass leaves stranded on beaches at the waterfront. We adopted a hierarchical geographic sampling to unravel population structure in a species living at the sea-land transition and, hence, likely subjected to dramatically contrasting forces. Results: Mitochondrial DNA showed historical phylogeographic breaks among Adriatic, Ionian and the remaining basins (Tyrrhenian, Western and Eastern Mediterranean Sea) likely caused by the geological and climatic changes of the Pleistocene. Microsatellites (and to a lesser extent allozymes) detected a further subdivision between and within the Western Mediterranean and the Tyrrhenian Sea due to present-day processes. A pattern of isolation by distance was not detected in any of the analyzed data set. Conclusions: We conclude that the population structure of O. montagui is the result of the interplay of two contrasting forces that act on the species population genetic structure. On one hand, the species semi-terrestrial life style would tend to determine the onset of local differences. On the other hand, these differences are partially counter-balanced by passive movements of migrants via rafting on heaps of dead seagrass leaves across sites by sea surface currents. Approximate Bayesian Computations support dispersal at sea as prevalent over terrestrial regionalism.}, language = {en} } @article{TiscarenoMitchellMurrayetal.2013, author = {Tiscareno, Matthew S. and Mitchell, Colin J. and Murray, Carl D. and Di Nino, Daiana and Hedman, Matthew M. and Schmidt, J{\"u}rgen and Burns, Joseph A. and Cuzzi, Jeffrey N. and Porco, Carolyn C. and Beurle, Kevin and Evans, Michael W.}, title = {Observations of Ejecta clouds produced by impacts onto Saturn's rings}, series = {Science}, volume = {340}, journal = {Science}, number = {6131}, publisher = {American Assoc. for the Advancement of Science}, address = {Washington}, issn = {0036-8075}, doi = {10.1126/science.1233524}, pages = {460 -- 464}, year = {2013}, abstract = {We report observations of dusty clouds in Saturn's rings, which we interpret as resulting from impacts onto the rings that occurred between 1 and 50 hours before the clouds were observed. The largest of these clouds was observed twice; its brightness and cant angle evolved in a manner consistent with this hypothesis. Several arguments suggest that these clouds cannot be due to the primary impact of one solid meteoroid onto the rings, but rather are due to the impact of a compact stream of Saturn-orbiting material derived from previous breakup of a meteoroid. The responsible interplanetary meteoroids were initially between 1 centimeter and several meters in size, and their influx rate is consistent with the sparse prior knowledge of smaller meteoroids in the outer solar system.}, language = {en} } @article{NestLudwigUlusoyetal.2013, author = {Nest, Mathias and Ludwig, M. and Ulusoy, I. and Klamroth, Tillmann and Saalfrank, Peter}, title = {Electron correlation dynamics in atoms and molecules}, series = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, volume = {138}, journal = {The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr}, number = {16}, publisher = {American Institute of Physics}, address = {Melville}, issn = {0021-9606}, doi = {10.1063/1.4801867}, pages = {6}, year = {2013}, abstract = {In this paper, we present quantum dynamical calculations on electron correlation dynamics in atoms and molecules using explicitly time-dependent ab initio configuration interaction theory. The goals are (i) to show that in which cases it is possible to switch off the electronic correlation by ultrashort laser pulses, and (ii) to understand the temporal evolution and the time scale on which it reappears. We characterize the appearance of correlation through electron-electron scattering when starting from an uncorrelated state, and we identify pathways for the preparation of a Hartree-Fock state from the correlated, true ground state. Exemplary results for noble gases, alkaline earth elements, and selected molecules are provided. For Mg we show that the uncorrelated state can be prepared using a shaped ultrashort laser pulse.}, language = {en} } @article{VahabiSchulzShokrietal.2013, author = {Vahabi, Mahsa and Schulz, Johannes H. P. and Shokri, Babak and Metzler, Ralf}, title = {Area coverage of radial Levy flights with periodic boundary conditions}, series = {Physical review : E, Statistical, nonlinear and soft matter physics}, volume = {87}, journal = {Physical review : E, Statistical, nonlinear and soft matter physics}, number = {4}, publisher = {American Physical Society}, address = {College Park}, issn = {1539-3755}, doi = {10.1103/PhysRevE.87.042136}, pages = {10}, year = {2013}, abstract = {We consider the area coverage of radial Levy flights in a finite square area with periodic boundary conditions. From simulations we show how the fractal path dimension d(f) and thus the degree of area coverage depends on the number of steps of the trajectory, the size of the area, and the resolution of the applied box counting algorithm. For sufficiently long trajectories and not too high resolution, the fractal dimension returned by the box counting method equals two, and in that sense the Levy flight fully covers the area. Otherwise, the determined fractal dimension equals the stable index of the distribution of jump lengths of the Levy flight. We provide mathematical expressions for the turnover between these two scaling regimes. As complementary methods to analyze confined Levy flights we investigate fractional order moments of the position for which we also provide scaling arguments. Finally, we study the time evolution of the probability density function and the first passage time density of Levy flights in a square area. Our findings are of interest for a general understanding of Levy flights as well as for the analysis of recorded trajectories of animals searching for food or for human motion patterns.}, language = {en} } @article{LeunertGrossartGerhardtetal.2013, author = {Leunert, Franziska and Grossart, Hans-Peter and Gerhardt, Volkmar and Eckert, Werner}, title = {Toxicant induced changes on delayed fluorescence decay kinetics of cyanobacteria and green algae a rapid and sensitive biotest}, series = {PLoS one}, volume = {8}, journal = {PLoS one}, number = {4}, publisher = {PLoS}, address = {San Fransisco}, issn = {1932-6203}, doi = {10.1371/journal.pone.0063127}, pages = {7}, year = {2013}, abstract = {Algal tests have developed into routine tools for testing toxicity of pollutants in aquatic environments. Meanwhile, in addition to algal growth rates, an increasing number of fluorescence based methods are used for rapid and sensitive toxicity measures. The present study stresses the suitability of delayed fluorescence (DF) as a promising parameter for biotests. DF is based on the recombination fluorescence at the reaction centre of photosystem II, which is emitted only by photosynthetically active cells. We analyzed the effects of three chemicals (3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU), 3,5 Dichlorophenol (3,5 DCP) and copper) on the shape of the DF decay kinetics for potential use in phytoplankton toxicity tests. The short incubation tests were done with four phytoplankton species, with special emphasis on the cyanobacterium Microcystis aeruginosa. All species exhibited a high sensitivity to DCMU, but cyanobacteria were more affected by copper and less by 3,5 DCP than the tested green algae. Analyses of changes in the DF decay curve in response to the added chemicals indicated the feasibility of the DF decay approach as a rapid and sensitive testing tool.}, language = {en} } @article{CotroneiHolschneider2013, author = {Cotronei, Mariantonia and Holschneider, Matthias}, title = {Partial parameterization of orthogonal wavelet matrix filters}, series = {Journal of computational and applied mathematics}, volume = {243}, journal = {Journal of computational and applied mathematics}, number = {4}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0377-0427}, doi = {10.1016/j.cam.2012.11.016}, pages = {113 -- 125}, year = {2013}, abstract = {In this paper we propose a procedure which allows the construction of a large family of FIR d x d matrix wavelet filters by exploiting the one-to-one correspondence between QMF systems and orthogonal operators which commute with the shifts by two. A characterization of the class of filters of full rank type that can be obtained with such procedure is given. In particular, we restrict our attention to a special construction based on the representation of SO(2d) in terms of the elements of its Lie algebra. Explicit expressions for the filters in the case d = 2 are given, as a result of a local analysis of the parameterization obtained from perturbing the Haar system.}, language = {en} } @article{KoenigPapkeKopyshevetal.2013, author = {K{\"o}nig, Tobias and Papke, Thomas and Kopyshev, Alexey and Santer, Svetlana}, title = {Atomic force microscopy nanolithography fabrication of metallic nano-slits using silicon nitride tips}, series = {Journal of materials science}, volume = {48}, journal = {Journal of materials science}, number = {10}, publisher = {Springer}, address = {New York}, issn = {0022-2461}, doi = {10.1007/s10853-013-7188-x}, pages = {3863 -- 3869}, year = {2013}, abstract = {In this paper, we report on the properties of nano-slits created in metal thin films using atomic force microscope (AFM) nanolithography (AFM-NL). We demonstrate that instead of expensive diamond AFM tips, it is also possible to use low cost silicon nitride tips. It is shown that depending on the direction of scratching, nano-slits of different widths and depths can be fabricated at constant load force. We elucidate the reasons for this behavior and identify an optimal direction and load force for scratching a gold layer.}, language = {en} } @article{DulanyaReedTrauth2013, author = {Dulanya, Zuze and Reed, Jane M. and Trauth, Martin H.}, title = {Mapping changing shorelines in the Malombe and Chiuta lakes of Malawi-environmental effects of recent climatic variations}, series = {Catena : an interdisciplinary journal of soil science, hydrology, geomorphology focusing on geoecology and landscape evolution}, volume = {104}, journal = {Catena : an interdisciplinary journal of soil science, hydrology, geomorphology focusing on geoecology and landscape evolution}, number = {10}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0341-8162}, doi = {10.1016/j.catena.2012.10.016}, pages = {111 -- 119}, year = {2013}, abstract = {This study examines patterns of climate variability by mapping shoreline changes between 1973 and 2008 for two shallow lakes in Malawi, East Africa. Multi-temporal LANDSAT data covering eight different years within the period of investigation were utilised for lake-area mapping, using image classification techniques. The approach was verified using simple comparisons with local rainfall data and satellite altimetry data. Results indicated that the lake areas varied between the different years investigated and that, although the lakes were affected by the same climate-forcing mechanisms, the individual basin characteristics had a critical effect on their responses. The most likely drivers for the climate-related shoreline variations are the El Nino/Southern Oscillation (ENSO) and the Indian Ocean Dipole (IOD), causing synchronous changes to the water levels in both lakes, albeit showing differences in climate signal amplification.}, language = {en} } @article{Murr2013, author = {Murr, R{\"u}diger}, title = {Characterization of infinite divisibility by duality formulas application to Levy processes and random measures}, series = {Stochastic processes and their application}, volume = {123}, journal = {Stochastic processes and their application}, number = {5}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0304-4149}, doi = {10.1016/j.spa.2012.12.012}, pages = {1729 -- 1749}, year = {2013}, abstract = {Processes with independent increments are proven to be the unique solutions of duality formulas. This result is based on a simple characterization of infinitely divisible random vectors by a functional equation in which a difference operator appears. This operator is constructed by a variational method and compared to approaches involving chaos decompositions. We also obtain a related characterization of infinitely divisible random measures.}, language = {en} } @article{KyprianidisCollomosseWangetal.2013, author = {Kyprianidis, Jan Eric and Collomosse, John and Wang, Tinghuai and Isenberg, Tobias}, title = {State of the "Art" a taxonomy of artistic stylization techniques for images and video}, series = {IEEE transactions on visualization and computer graphics}, volume = {19}, journal = {IEEE transactions on visualization and computer graphics}, number = {5}, publisher = {Inst. of Electr. and Electronics Engineers}, address = {Los Alamitos}, issn = {1077-2626}, doi = {10.1109/TVCG.2012.160}, pages = {866 -- 885}, year = {2013}, abstract = {This paper surveys the field of nonphotorealistic rendering (NPR), focusing on techniques for transforming 2D input (images and video) into artistically stylized renderings. We first present a taxonomy of the 2D NPR algorithms developed over the past two decades, structured according to the design characteristics and behavior of each technique. We then describe a chronology of development from the semiautomatic paint systems of the early nineties, through to the automated painterly rendering systems of the late nineties driven by image gradient analysis. Two complementary trends in the NPR literature are then addressed, with reference to our taxonomy. First, the fusion of higher level computer vision and NPR, illustrating the trends toward scene analysis to drive artistic abstraction and diversity of style. Second, the evolution of local processing approaches toward edge-aware filtering for real-time stylization of images and video. The survey then concludes with a discussion of open challenges for 2D NPR identified in recent NPR symposia, including topics such as user and aesthetic evaluation.}, language = {en} } @article{WeisseLaufensteinWeithoff2013, author = {Weisse, Thomas and Laufenstein, Nicole and Weithoff, Guntram}, title = {Multiple environmental stressors confine the ecological niche of the rotifer Cephalodella acidophila}, series = {Freshwater biology}, volume = {58}, journal = {Freshwater biology}, number = {5}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0046-5070}, doi = {10.1111/fwb.12104}, pages = {1008 -- 1015}, year = {2013}, abstract = {1The planktonic food web in extremely acidic mining lakes is restricted to a few species that are either acidophilic or acidotolerant. Common metazoans inhabiting acidic mining lakes with a pH below 3 include rotifers in the genera Cephalodella and Elosa. 2The life history response of Cephalodella acidophila to three environmental key factors, pH (2, 3.5, 5.0 and 7.0), temperature (10, 17.5 and 25 degrees C) and food concentration (10000, 35000 and 50000algal cells per mL), was investigated in a full factorial design using life-table experiments. 3The effect of each of the three environmental variables investigated on the rotifer life cycle parameters (life span, fecundity and population growth rate) differed. C.acidophila is a stenoecious species with a pH optimum in the range 34 and a comparably high food threshold. Combining the laboratory results with field data, we conclude that C.acidophila is severely growth limited in its natural habitat. However, low pH alone is not harmful as long as temperatures are moderate to warm and food is abundant. 4The population of C.acidophila in the field is maintained mainly due to release from competitors and predators.}, language = {en} } @article{SchmidtElizarovBergeretal.2013, author = {Schmidt, Bernd and Elizarov, Nelli and Berger, Ren{\´e} and Petersen, Monib H.}, title = {From paracetamol to rolipram and derivatives - application of deacetylation-diazotation sequences and palladium-catalyzed matsuda-heck reaction}, series = {Synthesis}, volume = {45}, journal = {Synthesis}, number = {9}, publisher = {Thieme}, address = {Stuttgart}, issn = {0039-7881}, doi = {10.1055/s-0032-1316874}, pages = {1174 -- 1180}, year = {2013}, abstract = {A six-step synthesis of the antidepressant rolipram from the popular analgetic 4-acetamidophenol (paracetamol) is described. The steps include oxidative functionalization of the aromatic core, diazonium salt formation via deacetylation-diazotation, Matsuda-Heck reaction, conjugate addition of nitromethane, and hydrogenative cyclization.}, language = {en} } @article{NazarovadeHoogHoffetal.2013, author = {Nazarova, Larisa B. and de Hoog, Verena and Hoff, Ulrike and Dirksen, Oleg and Diekmann, Bernhard}, title = {Late Holocene climate and environmental changes in Kamchatka inferred from the subfossil chironomid record}, series = {Quaternary science reviews : the international multidisciplinary research and review journal}, volume = {67}, journal = {Quaternary science reviews : the international multidisciplinary research and review journal}, number = {9}, publisher = {Elsevier}, address = {Oxford}, issn = {0277-3791}, doi = {10.1016/j.quascirev.2013.01.018}, pages = {81 -- 92}, year = {2013}, abstract = {This study presents a reconstruction of the Late Holocene climate in Kamchatka based on chironomid remains from a 332 cm long composite sediment core recovered from Dvuyurtochnoe Lake (Two-Yurts Lake, TYL) in central Kamchatka. The oldest recovered sediments date to about 4500 cal years BP. Chironomid head capsules from TYL reflect a rich and diverse fauna. An unknown morphotype of Tanytarsini, Tanytarsus type klein, was found in the lake sediments. Our analysis reveals four chironomid assemblage zones reflecting four different climatic periods in the Late Holocene. Between 4500 and 4000 cal years BP, the chironomid composition indicates a high lake level, well-oxygenated lake water conditions and close to modern temperatures (similar to 13 degrees C). From 4000 to 1000 cal years BP, two consecutive warm intervals were recorded, with the highest reconstructed temperature reaching 16.8 degrees C between 3700 and 2800 cal years BP. Cooling trend, started around 1100 cal years BP led to low temperatures during the last stage of the Holocene. Comparison with other regional studies has shown that termination of cooling at the beginning of late Holocene is relatively synchronous in central Kamchatka, South Kurile, Bering and Japanese Islands and take place around 3700 cal years BP. From ca 3700 cal years BP to the last millennium, a newly strengthened climate continentality accompanied by general warming trend with minor cool excursions led to apparent spatial heterogeneity of climatic patterns in the region. Some timing differences in climatic changes reconstructed from chironomid record of TYL sediments and late Holocene events reconstructed from other sites and other proxies might be linked to differences in local forcing mechanisms or caused by the different degree of dating precision, the different temporal resolution, and the different sensitive responses of climate proxies to the climate variations. Further high-resolution stratigraphic studies in this region are needed to understand the spatially complex pattern of climate change in Holocene in Kamchatka and the surrounding region.}, language = {en} } @article{LueckRuehlmann2013, author = {L{\"u}ck, Erika and R{\"u}hlmann, J{\"o}rg}, title = {Resistivity mapping with GEOPHILUS ELECTRICUS - Information about lateral and vertical soil heterogeneity}, series = {Geoderma : an international journal of soil science}, volume = {199}, journal = {Geoderma : an international journal of soil science}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0016-7061}, doi = {10.1016/j.geoderma.2012.11.009}, pages = {2 -- 11}, year = {2013}, abstract = {GEOPHILUS ELECTRICUS (nickname GEOPHILUS) is a novel system for mapping the complex electrical bulk resistivity of soils. Rolling electrodes simultaneously measure amplitude and phase data at frequencies ranging from 1 mHz to 1 kHz. The sensor's design and technical specifications allow for measuring these parameters at five depths of up to ca. 1.5 m. Data inversion techniques can be employed to determine resistivity models instead of apparent values and to image soil layers and their geometry with depth. When used in combination with a global positioning system (GPS) and a suitable cross-country vehicle, it is possible to map about 100 ha/day (assuming 1 data point is recorded per second and the line spacing is 18 m). The applicability of the GEOPHILUS system has been demonstrated on several sites, where soils show variations in texture, stratification, and thus electrical characteristics. The data quality has been studied by comparison with 'static' electrodes, by repeated measurements, and by comparison with other mobile conductivity mapping devices (VERIS3100 and EM38). The high quality of the conductivity data produced by the GEOPHILUS system is evident and demonstrated by the overall consistency of the individual maps, and in the clear stratification also confirmed by independent data. The GEOPHILUS system measures complex values of electrical resistivity in terms of amplitude and phase. Whereas electrical conductivity data (amplitude) are well established in soil science, the interpretation of phase data is a topic of current research. Whether phase data are able to provide additional information depends on the site-specific settings. Here, we present examples, where phase data provide complementary information on man-made structures such as metal pipes and soil compaction.}, language = {en} } @article{FrindteEckertAttermeyeretal.2013, author = {Frindte, Katharina and Eckert, Werner and Attermeyer, Katrin and Grossart, Hans-Peter}, title = {Internal wave-induced redox shifts affect biogeochemistry and microbial activity in sediments - a simulation experiment}, series = {Biogeochemistry}, volume = {113}, journal = {Biogeochemistry}, number = {1-3}, publisher = {Springer}, address = {Dordrecht}, issn = {0168-2563}, doi = {10.1007/s10533-012-9769-1}, pages = {423 -- 434}, year = {2013}, abstract = {Internal waves (seiches) are well-studied physical processes in stratified lakes, but their effects on sediment porewater chemistry and microbiology are still largely unexplored. Due to pycnocline oscillations, sediments are exposed to recurrent changes between epilimnetic and hypolimnetic water. This results in strong differences of environmental conditions, which should be reflected in the responses of redox-sensitive biogeochemical processes at both, the sediment-water interface and deeper sediment layers. We tested in a series of mesocosm experiments the influence of seiche-induced redox changes on porewater chemistry and bacterial activity in the sediments under well controlled conditions. Thereby, we excluded effects of changes in current and temperature regimes. For a period of 10 days, intact sediment cores from oligotrophic Lake Stechlin were incubated under constant (either oxic or anoxic) or alternating redox conditions. Solute concentrations were measured as porewater profiles in the sediment, while microbial activity was determined in the upper 0.5 cm of sediment. Oxic and alternating redox conditions resulted in similar ammonium, phosphate, and methane porewater concentrations, while concentrations of each analyte were considerably higher in anoxic cores. Microbial activity was clearly lower in the anoxic cores than in the oxic and the alternating cores. In conclusion, cores with intermittent anoxic phases of up to 24 hours do not differ in biogeochemistry and microbial activities from static oxic sediments. However, due to various physical processes seiches cause oxygen to penetrate deeper into sediment layers, which affects sediment redox gradients and increase microbial activity in seiche-influenced sediments.}, language = {en} } @article{AbdissaInduliAkalaetal.2013, author = {Abdissa, Negera and Induli, Martha and Akala, Hoseah M. and Heydenreich, Matthias and Midiwo, Jacob O. and Ndakala, Albert and Yenesew, Abiy}, title = {Knipholone cyclooxanthrone and an anthraquinone dimer with antiplasmodial activities from the roots of Kniphofia foliosa}, series = {Phytochemistry letters}, volume = {6}, journal = {Phytochemistry letters}, number = {2}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1874-3900}, doi = {10.1016/j.phytol.2013.02.005}, pages = {241 -- 245}, year = {2013}, abstract = {A new phenylanthrone, named knipholone cyclooxanthrone and a dimeric anthraquinone, 10-methoxy-10,7'-(chrysophanol anthrone)-chrysophanol were isolated from the roots of Kniphofia foliosa together with the rare naphthalene glycoside, dianellin. The structures were determined by NMR and mass spectroscopic techniques. The compounds showed antiplasmodial activities against the chloroquine-resistant (W2) and chloroquine-sensitive (D6) strains of Plasmodium falciparum with 10-methoxy-10,7'-(chrysophanol anthrone)-chrysophanol being the most active with IC50 values of 1.17 +/- 0.12 and 4.07 +/- 1.54 mu g/ml, respectively.}, language = {en} } @article{ThinesKummer2013, author = {Thines, Marco and Kummer, Volker}, title = {Diversity and species boundaries in floricolous downy mildews}, series = {Mycological progress : international journal of the German Mycological Society}, volume = {12}, journal = {Mycological progress : international journal of the German Mycological Society}, number = {2}, publisher = {Springer}, address = {Heidelberg}, issn = {1617-416X}, doi = {10.1007/s11557-012-0837-7}, pages = {321 -- 329}, year = {2013}, abstract = {Floricolous downy mildews are a monophyletic group of members of the genus Peronospora (Oomycota, Peronosporales). These downy mildews can be found on a variety of families of the Asteridae, including Asteraceae, Campanulaceae, Dipsacaceae, Lamiaceae, and Orobanchaceae. With the exception of Peronospora radii, which can also cause economically relevant losses, sporulation usually takes place only on floral parts of their hosts. However, only very few specimens of these mostly inconspicuous downy mildews have so far been included in molecular phylogenies. Focusing on Lamiaceae, we have investigated multiple specimens of floricolous downy mildews for elucidating species boundaries and host specificity in this group. Based on both mitochondrial and nuclear loci, it became apparent that phylogenetic lineages in the Lamiaceae seem to be host genus specific and significant sequence diversity could be found between lineages. Based on distinctiveness in both phylogenetic reconstructions and morphology, the downy mildew on flowers of Stachys palustris is introduced as a new species, Peronospora jagei sp. nov., which can be morphologically distinguished from Peronospora stigmaticola by broader and shorter conidiospores. The diversity of the floricolous down mildews might be higher than previously assumed, although specimens from a much broader set of samples will be needed to confirm this view.}, language = {en} } @article{WeisseMoserScheffeletal.2013, author = {Weisse, Thomas and Moser, Michael and Scheffel, Ulrike and Stadler, Peter and Berendonk, Thomas U. and Weithoff, Guntram and Berger, Helmut}, title = {Systematics and species-specific response to pH of Oxytricha acidotolerans sp nov and Urosomoida sp (Ciliophora, Hypotricha) from acid mining lakes}, series = {European journal of protistology}, volume = {49}, journal = {European journal of protistology}, number = {2}, publisher = {Elsevier}, address = {Jena}, issn = {0932-4739}, doi = {10.1016/j.ejop.2012.08.001}, pages = {255 -- 271}, year = {2013}, abstract = {We investigated the morphology, phylogeny of the 18S rDNA, and pH response of Oxytricha acidotolerans sp. nov. and Urosomoida sp. (Ciliophora, Hypotricha) isolated from two chemically similar acid mining lakes (pH similar to 2.6) located at Langau, Austria, and in Lusatia, Germany. Oxytricha acidotolerans sp. nov. from Langau has 18 frontal-ventral-transverse cirri but a very indistinct kinety 3 fragmentation so that the assignment to Oxytricha is uncertain. The somewhat smaller species from Lusatia has a highly variable cirral pattern and the dorsal kineties arranged in the Urosomoida pattern and is, therefore, preliminary designated as Urosomoida sp. The pH response was measured as ciliate growth rates in laboratory experiments at pH ranging from 2.5 to 7.0. Our hypothesis was that the shape of the pH reaction norm would not differ between these closely related (3\% difference in their SSU rDNA) species. Results revealed a broad pH niche for O. acidotolerans, with growth rates peaking at moderately acidic conditions (pH 5.2). Cyst formation was positively and linearly related to pH. Urosomoida sp. was more sensitive to pH and did not survive at circumneutral pH. Accordingly, we reject our hypothesis that similar habitats would harbour ciliate species with virtually identical pH reaction norm.}, language = {en} } @article{FestmanAdamPrattetal.2013, author = {Festman, Yariv and Adam, Jos J. and Pratt, Jay and Fischer, Martin H.}, title = {Continuous hand movement induces a far-hand bias in attentional priority}, series = {Attention, perception, \& psychophysics : AP\&P ; a journal of the Psychonomic Society, Inc.}, volume = {75}, journal = {Attention, perception, \& psychophysics : AP\&P ; a journal of the Psychonomic Society, Inc.}, number = {4}, publisher = {Springer}, address = {New York}, issn = {1943-3921}, doi = {10.3758/s13414-013-0430-4}, pages = {644 -- 649}, year = {2013}, abstract = {Previous research on the interaction between manual action and visual perception has focused on discrete movements or static postures and discovered better performance near the hands (the near-hand effect). However, in everyday behaviors, the hands are usually moving continuously between possible targets. Therefore, the current study explored the effects of continuous hand motion on the allocation of visual attention. Eleven healthy adults performed a visual discrimination task during cyclical concealed hand movements underneath a display. Both the current hand position and its movement direction systematically contributed to participants' visual sensitivity. Discrimination performance increased substantially when the hand was distant from but moving toward the visual probe location (a far-hand effect). Implications of this novel observation are discussed.}, language = {en} } @article{RietschEccardScheffler2013, author = {Rietsch, Katrin and Eccard, Jana and Scheffler, Christiane}, title = {Decreased external skeletal robustness due to reduced physical activity?}, series = {American journal of human biology : the official journal of the Human Biology Council}, volume = {25}, journal = {American journal of human biology : the official journal of the Human Biology Council}, number = {3}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {1042-0533}, doi = {10.1002/ajhb.22389}, pages = {404 -- 410}, year = {2013}, abstract = {Objectives Childhood obesity is a global problem, e.g., due to physical inactivity. External skeletal robustness (Frame-Index) has decreased in German schoolchildren. An association between Frame-Index and physical activity was assumed. Further often body mass index (BMI) is analyzed without reference to bone structure. Therefore, we analyze relationships between Frame-Index, BMI, \% body fat, and physical activity. Methods In a cross-sectional study, 691 German children aged 610 years were investigated. BMI, \% body fat, Frame-Index, total steps p.w., sports club rate p.w., training time p.d., and TV-time p.d. were determined. Results Total steps (P<0.001), BMI (P<0.001), and \% body fat (P=0.024) are positively linked to Frame-Index. Total steps (P<0.001), sports club rate (P=0.001), and training time (P<0.001) are negatively associated with \% body fat. Total steps (P=0.017) are negatively linked to BMI. TV-time is positively related to BMI (P<0.001) and \% body fat (P<0.001). \% Body fat is affected by age (P<0.001), sex (P=0.028), and total steps (P=0.002). BMI is influenced by age (P<0.001), and Frame-Index by sex (P<0.001) and total steps (P=0.029). Principal component analysis indicates an association between BMI and TV-time and Frame-Index and total steps. Conclusions We demonstrate an association between external skeletal robustness and physical activity, which is not captured by in BMI measurements. Children should be physically active in order to maintain skeletal robustness. Am. J. Hum. Biol. 25:404410, 2013.}, language = {en} } @article{Mueller2013, author = {M{\"u}ller, Gesine}, title = {From "The Novel" (1966) to "The Art of the Novel" (2000) readings of Vargas Llosa as Topos of Latin American Disenchantment}, series = {Review: Literature and Arts of the Americas}, volume = {46}, journal = {Review: Literature and Arts of the Americas}, number = {1}, publisher = {Routledge, Taylor \& Francis Group}, address = {Abingdon}, issn = {0890-5762}, doi = {10.1080/08905762.2013.780894}, pages = {20 -- 25}, year = {2013}, language = {en} } @article{KlinkuschKlamroth2013, author = {Klinkusch, Stefan and Klamroth, Tillmann}, title = {Simulations of pump-probe exitations of electronic wave packets for a large qusi-rigid molecular system by means of an extension to the time-dependent configuration interaction singles method}, series = {Journal of theoretical and computational chemistry}, volume = {12}, journal = {Journal of theoretical and computational chemistry}, number = {3}, publisher = {World Scientific}, address = {Singapore}, issn = {0219-6336}, doi = {10.1142/S0219633613500053}, pages = {17}, year = {2013}, abstract = {In this paper, we report simulations of laser-driven many-electron dynamics by means of the time-dependent configuration interaction singles (TD-CIS) approach. Photoionization is included by a heuristic model within calculations employing standard Gaussian basis sets. Benzo[g]-N-methyl-quinolinium-7-hydroxylate (BMQ7H) serves as a test system to generate predefined wave packets, i.e. a superposition between the ground and fifth excited state, in a large molecule. For this molecule, these two states have a very similar geometry, which enables us to use the fixed nuclei approximation. Furthermore, this geometric stability would also prevent a dephasing of the electron wave packet due to nuclear dynamics in an experimental realization of our simulations. We also simulate the possible detection of such a wave packet by ultra short probe laser pulses, i.e. pump-probe spectra.}, language = {en} } @article{LuoYanZhou2013, author = {Luo, Yingyi and Yan, Ming and Zhou, Xiaolin}, title = {Prosodic boundaries delay the processing of upcoming lexical information during silent sentence reading}, series = {Journal of experimental psychology : Learning, memory, and cognition}, volume = {39}, journal = {Journal of experimental psychology : Learning, memory, and cognition}, number = {3}, publisher = {American Psychological Association}, address = {Washington}, issn = {0278-7393}, doi = {10.1037/a0029182}, pages = {915 -- 930}, year = {2013}, abstract = {Prosodic boundaries can be used to guide syntactic parsing in both spoken and written sentence comprehension, but it is unknown whether the processing of prosodic boundaries affects the processing of upcoming lexical information. In 3 eye-tracking experiments, participants read silently sentences that allow for 2 possible syntactic interpretations when there is no comma or other cue specifying which interpretation should be taken. In Experiments 1 and 2, participants heard a low-pass filtered auditory version of the sentence, which provided a prosodic boundary cue prior to each sentence. In Experiment 1, we found that the boundary cue helped syntactic disambiguation after the cue and led to longer fixation durations on regions right before the cue than on identical regions without prosodic boundary information. In Experiments 2 and 3, we used a gaze-contingent display-change paradigm to manipulate the parafoveal visibility of the first constituent character of the target word after the disambiguating position. Results of Experiment 2 showed that previewing the first character significantly reduced the reading time of the target word, but this preview benefit was greatly reduced when the prosodic boundary cue was introduced at this position. In Experiment 3, instead of the acoustic cues, a visually presented comma was inserted at the disambiguating position in each sentence. Results showed that the comma effect on lexical processing was essentially the same as the effect of prosodic boundary cue. These findings demonstrate that processing a prosodic boundary could impair the processing of parafoveal information during sentence reading.}, language = {en} } @article{MassonKliegl2013, author = {Masson, Michael E. J. and Kliegl, Reinhold}, title = {Modulation of additive and interactive effects in lexical decision by Trial History}, series = {Journal of experimental psychology : Learning, memory, and cognition}, volume = {39}, journal = {Journal of experimental psychology : Learning, memory, and cognition}, number = {3}, publisher = {American Psychological Association}, address = {Washington}, issn = {0278-7393}, doi = {10.1037/a0029180}, pages = {898 -- 914}, year = {2013}, abstract = {Additive and interactive effects of word frequency, stimulus quality, and semantic priming have been used to test theoretical claims about the cognitive architecture of word-reading processes. Additive effects among these factors have been taken as evidence for discrete-stage models of word reading. We present evidence from linear mixed-model analyses applied to 2 lexical decision experiments indicating that apparent additive effects can be the product of aggregating over- and underadditive interaction effects that are modulated by recent trial history, particularly the lexical status and stimulus quality of the previous trial's target. Even a simple practice effect expressed as improved response speed across trials was powerfully modulated by the nature of the previous target item. These results suggest that additivity and interaction between factors may reflect trial-to-trial variation in stimulus representations and decision processes rather than fundamental differences in processing architecture.}, language = {en} } @article{LauchtTreutleinBlomeyeretal.2013, author = {Laucht, Manfred and Treutlein, Jens and Blomeyer, Dorothea and Buchmann, Arlette F. and Schmidt, Martin H. and Esser, G{\"u}nter and Jennen-Steinmetz, Christine and Rietschel, Marcella and Banaschewski, Tobias}, title = {Interactive effects of corticotropin-releasing hormone receptor 1 gene and childhood adversity on depressive symptoms in young adults findings from a longitudinal study}, series = {European neuropsychopharmacology : the journal of the European College of Neuropsychopharmacology}, volume = {23}, journal = {European neuropsychopharmacology : the journal of the European College of Neuropsychopharmacology}, number = {5}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0924-977X}, doi = {10.1016/j.euroneuro.2012.06.002}, pages = {358 -- 367}, year = {2013}, abstract = {Accumulating research suggests a moderating role for the corticotropin-releasing hormone receptor 1 gene (CRHR1) in the association between childhood adversity and adult depression. The present study aims to replicate recent findings using different genetic variants and measures of early adversity assessed both prospectively and retrospectively. Data were collected in the context of an ongoing epidemiological cohort study following the outcome of early risk factors from birth into adulthood. 300 participants (137 males, 163 females) were genotyped for four CRHR1 SNPs (rs7209436, rs110402, rs242924, and rs17689882) and completed the Beck Depression Inventory at ages 19, 22 and 23 years. Childhood adversity was assessed using the Childhood Trauma Questionnaire and by a standardized parent interview yielding an index of family adversity. Our results indicate that CRHR1 and childhood adversity interacted to predict depressive symptoms in young adults. Specifically, we found that the impact of childhood maltreatment on adult depressive symptoms was significantly higher in individuals (i) with two copies of the CRHR1 TAT haplotype, and (ii) homozygous for the G allele of rs17689882. The interaction was demonstrated for exposure to childhood maltreatment as assessed by retrospective self-report, but not to prospectively ascertain objective family adversity. The present study partially replicates recent findings of a CRHR1 by childhood adversity interaction with regard to adult depression highlighting the subjective characteristics of the environmental pathogen that is operative in this interaction.}, language = {en} } @article{ReimThammRolkeetal.2013, author = {Reim, Tina and Thamm, Markus and Rolke, Daniel and Blenau, Wolfgang and Scheiner, Ricarda}, title = {Suitability of three common reference genes for quantitative real-time PCR in honey bees}, series = {Apidologie : a quality journal in bee science}, volume = {44}, journal = {Apidologie : a quality journal in bee science}, number = {3}, publisher = {Springer}, address = {Paris}, issn = {0044-8435}, doi = {10.1007/s13592-012-0184-3}, pages = {342 -- 350}, year = {2013}, abstract = {Honey bees are important model organisms for neurobiology, because they display a large array of behaviors. To link behavior with individual gene function, quantitative polymerase chain reaction is frequently used. Comparing gene expression of different individuals requires data normalization using adequate reference genes. These should ideally be expressed stably throughout lifetime. Unfortunately, this is frequently not the case. We studied how well three commonly used reference genes are suited for this purpose and measured gene expression in the brains of honey bees differing in age and social role. Although rpl32 is used most frequently, it only remains stable in expression between newly emerged bees, nurse-aged bees, and pollen foragers but shows a peak at the age of 12 days. The genes gapdh and ef1 alpha-f1, in contrast, are expressed stably in the brain throughout all age groups except newly emerged bees. According to stability software, gapdh was expressed most stably, followed by rpl32 and ef1 alpha-f1.}, language = {en} } @article{BuergerSobieCannonetal.2013, author = {B{\"u}rger, Gerd and Sobie, S. R. and Cannon, A. J. and Werner, A. T. and Murdock, T. Q.}, title = {Downscaling extremes an intercomparison of multiple methods for future climate}, series = {Journal of climate}, volume = {26}, journal = {Journal of climate}, number = {10}, publisher = {American Meteorological Soc.}, address = {Boston}, issn = {0894-8755}, doi = {10.1175/JCLI-D-12-00249.1}, pages = {3429 -- 3449}, year = {2013}, abstract = {This study follows up on a previous downscaling intercomparison for present climate. Using a larger set of eight methods the authors downscale atmospheric fields representing present (1981-2000) and future (2046-65) conditions, as simulated by six global climate models following three emission scenarios. Local extremes were studied at 20 locations in British Columbia as measured by the same set of 27 indices, ClimDEX, as in the precursor study. Present and future simulations give 2 x 3 x 6 x 8 x 20 x 27 = 155 520 index climatologies whose analysis in terms of mean change and variation is the purpose of this study. The mean change generally reinforces what is to be expected in a warmer climate: that extreme cold events become less frequent and extreme warm events become more frequent, and that there are signs of more frequent precipitation extremes. There is considerable variation, however, about this tendency, caused by the influence of scenario, climate model, downscaling method, and location. This is analyzed using standard statistical techniques such as analysis of variance and multidimensional scaling, along with an assessment of the influence of each modeling component on the overall variation of the simulated change. It is found that downscaling generally has the strongest influence, followed by climate model; location and scenario have only a minor influence. The influence of downscaling could be traced back in part to various issues related to the methods, such as the quality of simulated variability or the dependence on predictors. Using only methods validated in the precursor study considerably reduced the influence of downscaling, underpinning the general need for method verification.}, language = {en} } @article{WiesmeierPrietzelBartholdetal.2013, author = {Wiesmeier, Martin and Prietzel, J{\"o}rg and Barthold, Frauke Katrin and Sp{\"o}rlein, Peter and Geuss, Uwe and Hangen, Edzard and Reischl, Arthur and Schilling, Bernd and von L{\"u}tzow, Margit and K{\"o}gel-Knabner, Ingrid}, title = {Storage and drivers of organic carbon in forest soils of southeast Germany (Bavaria) - Implications for carbon sequestration}, series = {Forest ecology and management}, volume = {295}, journal = {Forest ecology and management}, number = {10}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0378-1127}, doi = {10.1016/j.foreco.2013.01.025}, pages = {162 -- 172}, year = {2013}, abstract = {Temperate forest soils of central Europe are regarded as important pools for soil organic carbon (SOC) and thought to have a high potential for carbon (C) sequestration. However, comprehensive data on total SOC storage, particularly under different forest types, and its drivers is limited. In this study, we analyzed a forest data set of 596 completely sampled soil profiles down to the parent material or to a depth of 1 m within Bavaria in southeast Germany in order to determine representative SOC stocks under different forest types in central Europe and the impact of different environmental parameters. We calculated a total median SOC stock of 9.8 kg m(-2) which is considerably lower compared with many other inventories within central Europe that used modelled instead of measured soil properties. Statistical analyses revealed climate as controlling parameter for the storage of SOC with increasing stocks in cool, humid mountainous regions and a strong decrease in areas with higher temperatures. No significant differences of total SOC storage were found between broadleaf, coniferous and mixed forests. However, coniferous forests stored around 35\% of total SOC in the labile organic layer that is prone to human disturbance, forest fires and rising temperatures. In contrast, mixed and broadleaf forests stored the major part of SOC in the mineral soil. Moreover, these two forest types showed unchanged or even slightly increased mineral SOC stocks with higher temperatures, whereas SOC stocks in mineral soils under coniferous forest were distinctly lower. We conclude that mixed and broadleaf forests are more advantageous for C sequestration than coniferous forests. An intensified incorporation of broadleaf species in extent coniferous forests of Bavaria would prevent substantial SOC losses as a result of rising temperatures in the course of climate change.}, language = {en} } @article{AmourMuttiChristetal.2013, author = {Amour, Frederic and Mutti, Maria and Christ, Nicolas and Immenhauser, Adrian and Benson, Gregory S. and Agar, Susan M. and Tomas, Sara and Kabiri, Lahcen}, title = {Outcrop analog for an oolitic carbonate ramp reservoir a scale-dependent geologic modeling approach based on stratigraphic hierarchy}, series = {AAPG bulletin}, volume = {97}, journal = {AAPG bulletin}, number = {5}, publisher = {American Association of Petroleum Geologists}, address = {Tulsa}, issn = {0149-1423}, doi = {10.1306/10231212039}, pages = {845 -- 871}, year = {2013}, abstract = {Considerable effort has been devoted to the development of simulation algorithms for facies modeling, whereas a discussion of how to combine those techniques has not existed. The integration of multiple geologic data into a three-dimensional model, which requires the combination of simulation techniques, is yet a current challenge for reservoir modeling. This article presents a thought process that guides the acquisition and modeling of geologic data at various scales. Our work is based on outcrop data collected from a Jurassic carbonate ramp located in the High Atlas mountain range of Morocco. The study window is 1 km (0.6 mi) wide and 100 m (328.1 ft) thick. We describe and model the spatial and hierarchical arrangement of carbonate bodies spanning from largest to smallest: (1) stacking pattern of high-frequency depositional sequences, (2) facies association, and (3) lithofacies. Five sequence boundaries were modeled using differential global position system mapping and light detection and ranging data. The surface-based model shows a low-angle profile with modest paleotopographic relief at the inner-to-middle ramp transition. Facies associations were populated using truncated Gaussian simulation to preserve ordered trends between the inner, middle, and outer ramps. At the lithofacies scale, field observations and statistical analysis show a mosaiclike distribution that was simulated using a fully stochastic approach with sequential indicator simulation. This study observes that the use of one single simulation technique is unlikely to correctly model the natural patterns and variability of carbonate rocks. The selection and implementation of different techniques customized for each level of the stratigraphic hierarchy will provide the essential computing flexibility to model carbonate settings. This study demonstrates that a scale-dependent modeling approach should be a common procedure when building subsurface and outcrop models.}, language = {en} } @article{SulpiceNikoloskiTschoepetal.2013, author = {Sulpice, Ronan and Nikoloski, Zoran and Tschoep, Hendrik and Antonio, Carla and Kleessen, Sabrina and Larhlimi, Abdelhalim and Selbig, Joachim and Ishihara, Hirofumi and Gibon, Yves and Fernie, Alisdair R. and Stitt, Mark}, title = {Impact of the Carbon and Nitrogen Supply on Relationships and Connectivity between Metabolism and Biomass in a Broad Panel of Arabidopsis Accessions(1[W][OA])}, series = {Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants}, volume = {162}, journal = {Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants}, number = {1}, publisher = {American Society of Plant Physiologists}, address = {Rockville}, issn = {0032-0889}, doi = {10.1104/pp.112.210104}, pages = {347 -- 363}, year = {2013}, abstract = {Natural genetic diversity provides a powerful tool to study the complex interrelationship between metabolism and growth. Profiling of metabolic traits combined with network-based and statistical analyses allow the comparison of conditions and identification of sets of traits that predict biomass. However, it often remains unclear why a particular set of metabolites is linked with biomass and to what extent the predictive model is applicable beyond a particular growth condition. A panel of 97 genetically diverse Arabidopsis (Arabidopsis thaliana) accessions was grown in near-optimal carbon and nitrogen supply, restricted carbon supply, and restricted nitrogen supply and analyzed for biomass and 54 metabolic traits. Correlation-based metabolic networks were generated from the genotype-dependent variation in each condition to reveal sets of metabolites that show coordinated changes across accessions. The networks were largely specific for a single growth condition. Partial least squares regression from metabolic traits allowed prediction of biomass within and, slightly more weakly, across conditions (cross-validated Pearson correlations in the range of 0.27-0.58 and 0.21-0.51 and P values in the range of <0.001-<0.13 and <0.001-<0.023, respectively). Metabolic traits that correlate with growth or have a high weighting in the partial least squares regression were mainly condition specific and often related to the resource that restricts growth under that condition. Linear mixed-model analysis using the combined metabolic traits from all growth conditions as an input indicated that inclusion of random effects for the conditions improves predictions of biomass. Thus, robust prediction of biomass across a range of conditions requires condition-specific measurement of metabolic traits to take account of environment-dependent changes of the underlying networks.}, language = {en} } @article{BeyeAnniyevCoffeeetal.2013, author = {Beye, Martin and Anniyev, Toyli and Coffee, Ryan and Dell'Angela, Martina and F{\"o}hlisch, Alexander and Gladh, J. and Katayama, T. and Kaya, S. and Krupin, O. and Mogelhoj, A. and Nilsson, A. and Nordlund, D. and Norskov, J. K. and Oberg, H. and Ogasawara, H. and Pettersson, Lars G. M. and Schlotter, W. F. and Sellberg, J. A. and Sorgenfrei, Nomi and Turner, J. J. and Wolf, M. and Wurth, Wilfried and Ostrom, H.}, title = {Selective ultrafast probing of transient hot chemisorbed and precursor States of CO on Ru(0001)}, series = {Physical review letters}, volume = {110}, journal = {Physical review letters}, number = {18}, publisher = {American Physical Society}, address = {College Park}, issn = {0031-9007}, doi = {10.1103/PhysRevLett.110.186101}, pages = {6}, year = {2013}, abstract = {We have studied the femtosecond dynamics following optical laser excitation of CO adsorbed on a Ru surface by monitoring changes in the occupied and unoccupied electronic structure using ultrafast soft x-ray absorption and emission. We recently reported [M. Dell'Angela et al. Science 339, 1302 (2013)] a phonon-mediated transition into a weakly adsorbed precursor state occurring on a time scale of >2 ps prior to desorption. Here we focus on processes within the first picosecond after laser excitation and show that the metal-adsorbate coordination is initially increased due to hot-electron-driven vibrational excitations. This process is faster than, but occurs in parallel with, the transition into the precursor state. With resonant x-ray emission spectroscopy, we probe each of these states selectively and determine the respective transient populations depending on optical laser fluence. Ab initio molecular dynamics simulations of CO adsorbed on Ru(0001) were performed at 1500 and 3000 K providing insight into the desorption process.}, language = {en} } @article{Ganghof2013, author = {Ganghof, Steffen}, title = {Does public reason require super-majoritarian democracy? Liberty, equality, and history in the justification of political institutions}, series = {Politics, philosophy \& economics}, volume = {12}, journal = {Politics, philosophy \& economics}, number = {2}, publisher = {Sage Publ.}, address = {Thousand Oaks}, issn = {1470-594X}, doi = {10.1177/1470594X12447786}, pages = {179 -- 196}, year = {2013}, abstract = {The project of public-reason liberalism faces a basic problem: publicly justified principles are typically too abstract and vague to be directly applied to practical political disputes, whereas applicable specifications of these principles are not uniquely publicly justified. One solution could be a legislative procedure that selects one member from the eligible set of inconclusively justified proposals. Yet if liberal principles are too vague to select sufficiently specific legislative proposals, can they, nevertheless, select specific legislative procedures? Based on the work of Gerald Gaus, this article argues that the only candidate for a conclusively justified decision procedure is a majoritarian or otherwise 'neutral' democracy. If the justification of democracy requires an equality baseline in the design of political regimes and if justifications for departure from this baseline are subject to reasonable disagreement, a majoritarian design is justified by default. Gaus's own preference for super-majoritarian procedures is based on disputable specifications of justified liberal principles. These procedures can only be defended as a sectarian preference if the equality baseline is rejected, but then it is not clear how the set of justifiable political regimes can be restricted to full democracies.}, language = {en} } @article{AnoopPrasadPlessenetal.2013, author = {Anoop, Ambili and Prasad, S. and Plessen, Birgit and Basavaiah, Nathani and Gaye, B. and Naumann, R. and Menzel, P. and Weise, S. and Brauer, Achim}, title = {Palaeoenvironmental implications of evaporative gaylussite crystals from Lonar Lake, central India}, series = {Journal of quaternary science}, volume = {28}, journal = {Journal of quaternary science}, number = {4}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0267-8179}, doi = {10.1002/jqs.2625}, pages = {349 -- 359}, year = {2013}, abstract = {We have undertaken petrographic, mineralogical, geochemical and isotopic investigations on carbonate minerals found within a 10-m-long core from Lonar Lake, central India, with the aim of evaluating their potential as palaeoenvironmental proxies. The core encompasses the entire Holocene and is the first well-dated high-resolution record from central India. While calcite and/or aragonite were found throughout the core, the mineral gaylussite was found only in two specific intervals (46303890 and 2040560 cal a BP). Hydrochemical and isotope data from inflowing streams and lake waters indicate that evaporitic processes play a dominant role in the precipitation of carbonates within this lake. Isotopic (18O and 13C) studies on the evaporative gaylussite crystals and residual bulk carbonates (calcite) from the long core show that evaporation is the major control on 18O enrichment in both the minerals. However, in case of 13C additional mechanisms, for example methanogenesis (gaylussite) and phytoplankton productivity (calcium carbonate), play an additional important role in some intervals. We also discuss the relevance of our investigation for palaeoclimate reconstruction and late Holocene monsoon variability.}, language = {en} } @article{EichmairMetzger2013, author = {Eichmair, Michael and Metzger, Jan}, title = {Large isoperimetric surfaces in initial data sets}, series = {Journal of differential geometry}, volume = {94}, journal = {Journal of differential geometry}, number = {1}, publisher = {International Press of Boston}, address = {Somerville}, issn = {0022-040X}, pages = {159 -- 186}, year = {2013}, abstract = {We study the isoperimetric structure of asymptotically flat Riemannian 3-manifolds (M, g) that are C-0-asymptotic to Schwarzschild of mass m > 0. Refining an argument due to H. Bray, we obtain an effective volume comparison theorem in Schwarzschild. We use it to show that isoperimetric regions exist in (M, g) for all sufficiently large volumes, and that they are close to centered coordinate spheres. This implies that the volume-preserving stable constant mean curvature spheres constructed by G. Huisken and S.-T. Yau as well as R. Ye as perturbations of large centered coordinate spheres minimize area among all competing surfaces that enclose the same volume. This confirms a conjecture of H. Bray. Our results are consistent with the uniqueness results for volume-preserving stable constant mean curvature surfaces in initial data sets obtained by G. Huisken and S.-T. Yau and strengthened by J. Qing and G. Tian. The additional hypotheses that the surfaces be spherical and far out in the asymptotic region in their results are not necessary in our work.}, language = {en} } @article{KlausHoelzelBochetal.2013, author = {Klaus, Valentin H. and H{\"o}lzel, Norbert and Boch, Steffen and M{\"u}ller, Jorg and Socher, Stephanie A. and Prati, Daniel and Fischer, Markus and Kleinebecker, Till}, title = {Direct and indirect associations between plant species richness and productivity in grasslands regional differences preclude simple generalization of productivity-biodiversity relationships}, series = {Preslia : the journal of the Czech Botanical Society}, volume = {85}, journal = {Preslia : the journal of the Czech Botanical Society}, number = {2}, publisher = {Czech Botanical Soc.}, address = {Praha}, issn = {0032-7786}, pages = {97 -- 112}, year = {2013}, abstract = {Plant species richness of permanent grasslands has often been found to be significantly associated with productivity. Concentrations of nutrients in biomass can give further insight into these productivity-plant species richness relationships, e.g. by reflecting land use or soil characteristics. However, the consistency of such relationships across different regions has rarely been taken into account, which might significantly compromise our potential for generalization. We recorded plant species richness and measured above-ground biomass and concentrations of nutrients in biomass in 295 grasslands in three regions in Germany that differ in soil and climatic conditions. Structural equation modelling revealed that nutrient concentrations were mostly indirectly associated with plant species richness via biomass production. However, negative associations between the concentrations of different nutrients and biomass and plant species richness differed considerably among regions. While in two regions, more than 40\% of the variation in plant species richness could be attributed to variation in biomass, K, P. and to some degree also N concentrations, in the third region only 15\% of the variation could be explained in this way. Generally, highest plant species richness was recorded in grasslands where N and P were co-limiting plant growth, in contrast to N or K (co-) limitation. But again, this pattern was not recorded in the third region. While for two regions land-use intensity and especially the application of fertilizers are suggested to be the main drivers causing the observed negative associations with productivity, in the third region the little variance accounted for, low species richness and weak relationships implied that former intensive grassland management, ongoing mineralization of peat and fluctuating water levels in fen grasslands have overruled effects of current land-use intensity and productivity. Finally, we conclude that regional replication is of major importance for studies seeking general insights into productivity-diversity relationships.}, language = {en} } @article{Zimmermann2013, author = {Zimmermann, Andreas}, title = {Palestine and the international criminal court quo vadis? - reach and limits of declarations under article 12(3)}, series = {Journal of international criminal justice}, volume = {11}, journal = {Journal of international criminal justice}, number = {2}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {1478-1387}, doi = {10.1093/jicj/mqt014}, pages = {303 -- 329}, year = {2013}, abstract = {In 2009, 'Palestine' lodged a declaration recognizing the jurisdiction of the ICC under Article 12(3). However, in April 2012, the OTP determined that this declaration had not brought about the result, of providing for the ICC's jurisdiction, pending clarification from the political organs of the UN concerning the legal status of Palestine within the organization. On 29 November 2012, the General Assembly granted Palestine the status of a non-member observer state within the UN framework, thereby fulfilling the condition mentioned by the OTP in April 2012. It is against this background that the article considers the current legal effects of the 2009 Palestinian declaration. In particular, it addresses the issue of whether the declaration, when read in conjunction with the 29 November 2012 decision, possesses retroactive effect, i.e. whether it provides, as claimed, for the Court's temporal jurisdiction from 1 July 2002 onwards or rather starting only from 29 November 2012. ... the current status granted to Palestine by the United Nations General Assembly is that of 'observer', not as a 'Non-member State'. ... [T]his... informs the current legal status of Palestine for the interpretation and application of article 12 [Rome Statute]. ... The Office could in the future consider allegations of crimes committed in Palestine, should competent organs of the United Nations... resolve the legal issue relevant to an assessment of article 12. ... International Criminal Court, Office of the Prosecutor, 'Situation in Palestine', 3 April 2012}, language = {en} } @article{ValoriDemoulinPariatetal.2013, author = {Valori, Gherarod and Demoulin, Pascal and Pariat, E. and Masson, S.}, title = {Accuracy of magnetic energy computations}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {553}, journal = {Astronomy and astrophysics : an international weekly journal}, number = {2}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {0004-6361}, doi = {10.1051/0004-6361/201220982}, pages = {14}, year = {2013}, abstract = {Context. For magnetically driven events, the magnetic energy of the system is the prime energy reservoir that fuels the dynamical evolution. In the solar context, the free energy (i.e., the energy in excess of the potential field energy) is one of the main indicators used in space weather forecasts to predict the eruptivity of active regions. A trustworthy estimation of the magnetic energy is therefore needed in three-dimensional (3D) models of the solar atmosphere, e. g., in coronal fields reconstructions or numerical simulations. Aims. The expression of the energy of a system as the sum of its potential energy and its free energy (Thomson's theorem) is strictly valid when the magnetic field is exactly solenoidal. For numerical realizations on a discrete grid, this property may be only approximately fulfilled. We show that the imperfect solenoidality induces terms in the energy that can lead to misinterpreting the amount of free energy present in a magnetic configuration. Methods. We consider a decomposition of the energy in solenoidal and nonsolenoidal parts which allows the unambiguous estimation of the nonsolenoidal contribution to the energy. We apply this decomposition to six typical cases broadly used in solar physics. We quantify to what extent the Thomson theorem is not satisfied when approximately solenoidal fields are used. Results. The quantified errors on energy vary from negligible to significant errors, depending on the extent of the nonsolenoidal component of the field. We identify the main source of errors and analyze the implications of adding a variable amount of divergence to various solenoidal fields. Finally, we present pathological unphysical situations where the estimated free energy would appear to be negative, as found in some previous works, and we identify the source of this error to be the presence of a finite divergence. Conclusions. We provide a method of quantifying the effect of a finite divergence in numerical fields, together with detailed diagnostics of its sources. We also compare the efficiency of two divergence-cleaning techniques. These results are applicable to a broad range of numerical realizations of magnetic fields.}, language = {en} } @article{Nehring2013, author = {Nehring, Benjamin}, title = {Construction of point processes for classical and quantum gases}, series = {Journal of mathematical physics}, volume = {54}, journal = {Journal of mathematical physics}, number = {5}, publisher = {American Institute of Physics}, address = {Melville}, issn = {0022-2488}, doi = {10.1063/1.4807080}, pages = {11}, year = {2013}, abstract = {We propose a construction of point processes via the method of cluster expansion. The important role of the class of infinitely divisible point processes is noted. Examples are permanental and determinantal processes as well as the classical Gibbs point processes, where the interaction is given by a stable and regular pair potential.}, language = {en} } @article{LammMetzger2013, author = {Lamm, Tobias and Metzger, Jan}, title = {Minimizers of the willmore functional with a small area constraint}, series = {ANNALES DE L INSTITUT HENRI POINCARE-ANALYSE NON LINEAIRE}, volume = {30}, journal = {ANNALES DE L INSTITUT HENRI POINCARE-ANALYSE NON LINEAIRE}, number = {3}, publisher = {Elsevier}, address = {Paris}, issn = {0294-1449}, doi = {10.1016/j.anihpc.2012.10.003}, pages = {497 -- 518}, year = {2013}, abstract = {We show the existence of a smooth spherical surface minimizing the Willmore functional subject to an area constraint in a compact Riemannian three-manifold, provided the area is small enough. Moreover, we partially classify complete surfaces of Willmore type with positive mean curvature in Riemannian three-manifolds.}, language = {en} } @article{AbboudSendPashniaketal.2013, author = {Abboud, Ali and Send, Sebastian and Pashniak, N. and Leitenberger, Wolfram and Ihle, Sebastian and Huth, M. and Hartmann, Robert and Str{\"u}der, Lothar and Pietsch, Ullrich}, title = {Sub-pixel resolution of a pnCCD for X-ray white beam applications}, series = {Journal of instrumentation}, volume = {8}, journal = {Journal of instrumentation}, number = {3}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1748-0221}, doi = {10.1088/1748-0221/8/05/P05005}, pages = {17}, year = {2013}, abstract = {A new approach to achieve sub-pixel spatial resolution in a pnCCD detector with 75 x 75 mu m(2) pixel size is proposed for X-ray applications in single photon counting mode. The approach considers the energy dependence of the charge cloud created by a single photon and its split probabilities between neighboring pixels of the detector based on a rectangular model for the charge cloud density. For cases where the charge of this cloud becomes distributed over three or four pixels the center position of photon impact can be reconstructed with a precision better than 2 mu m. The predicted charge cloud sizes are tested at selected X-ray fluorescence lines emitting energies between 6.4 keV and 17.4 keV and forming charge clouds with size (rms) varying between 8 mu m and 10 mu m respectively. The 2 mu m enhanced spatial resolution of the pnCCD is verified by means of an x-ray transmission experiment throughout an optical grating.}, language = {en} } @article{MillerSakKirbyetal.2013, author = {Miller, Scott R. and Sak, Peter B. and Kirby, Eric and Bierman, Paul R.}, title = {Neogene rejuvenation of central appalachian topography evidence for differential rock uplift from stream profiles and erosion rates}, series = {Earth \& planetary science letters}, volume = {369}, journal = {Earth \& planetary science letters}, number = {2}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0012-821X}, doi = {10.1016/j.epsl.2013.04.007}, pages = {1 -- 12}, year = {2013}, abstract = {The persistence of topography within ancient orogens remains one of the outstanding questions in landscape evolution. In the eastern North American Appalachians, this question is manifest in the outstanding problem of whether topographic relief is in a quasi-equilibrium state, decaying slowly over many millennia, or whether relief has increased during the late Cenozoic. Here we present quantitative geomorphic data from the nonglaciated portion of the Susquehanna River drainage basin that provide insight into these end-member models. Analysis of channel profiles draining upland catchments in the northern Valley and Ridge, Appalachian Plateau, Blue Ridge, and Piedmont provinces reveals that a large number of streams have well defined knickpoints clustered at 300-600 m elevation but not systematically associated with transitions from weak to resistant substrate. Cosmogenic Be-10 inventories of modern stream sediment indicate that erosion rates are spatially variable, ranging from similar to 5-30 m/Myr above knickpoints to similar to 50-100 m/Myr below knickpoints. Overall, channel gradients, normalized for drainage area, scale linearly with catchment-averaged erosion rates. Collectively, regionally consistent spatial relationships among erosion rate, channel steepness, and knickpoints reveal an ongoing wave of transient channel adjustment to a change in relative base level. Reconstructions of relict channel profiles above knickpoints suggest that higher rates of incision are associated with similar to 100-150 m of relative base level fall that accompanied epierogenic rock uplift rather than a change to a more erosive climate or drainage reorganization. Channel response timescales imply that the onset of relative base level change predates similar to 3.5 Ma and may have begun as early as similar to 15 Ma. We suggest that adjustment of the channel network was likely driven by changes in mantle dynamics along the eastern seaboard of North America during the Neogene.}, language = {en} } @article{EinarssonBahrkeSigurdssonetal.2013, author = {Einarsson, Jon M. and Bahrke, Sven and Sigurdsson, Bjarni Thor and Ng, Chuen-How and Petersen, Petur Henry and Sigurjonsson, Olafur E. and Jonsson, Halldor and Gislason, Johannes and Thormodsson, Finnbogi R. and Peter, Martin G.}, title = {Partially acetylated chitooligosaccharides bind to YKL-40 and stimulate growth of human osteoarthritic chondrocytes}, series = {Biochemical and biophysical research communications}, volume = {434}, journal = {Biochemical and biophysical research communications}, number = {2}, publisher = {Elsevier}, address = {San Diego}, issn = {0006-291X}, doi = {10.1016/j.bbrc.2013.02.122}, pages = {298 -- 304}, year = {2013}, abstract = {Recent evidences indicating that cellular kinase signaling cascades are triggered by oligomers of N-acetylglucosamine (ChOS) and that condrocytes of human osteoarthritic cartilage secrete the inflammation associated chitolectin YKL-40, prompted us to study the binding affinity of partially acetylated ChOS to YKL-40 and their effect on primary chondrocytes in culture. Extensive chitinase digestion and filtration of partially deacetylated chitin yielded a mixture of ChOS (Oligomin(TM)) and further ultrafiltration produced T-ChOS(TM), with substantially smaller fraction of the smallest sugars. YKL-40 binding affinity was determined for the different sized homologues, revealing micromolar affinities of the larger homologues to YKL-40. The response of osteoarthritic chondrocytes to Oligomin(TM) and T-ChOS(TM) was determined, revealing 2- to 3-fold increases in cell number. About 500 mu g/ml was needed for Oligomin(TM) and around five times lower concentration for T-ChOS(TM), higher concentrations abolished this effect for both products. Addition of chitotriose inhibited cellular responses mediated by larger oligosaccharides. These results, and the fact that the partially acetylated T-ChOS(TM) homologues should resist hydrolysis, point towards a new therapeutic concept for treating inflammatory joint diseases.}, language = {en} } @article{ShaydukHerzogBojahretal.2013, author = {Shayduk, Roman and Herzog, Marc and Bojahr, Andre and Schick, Daniel and Gaal, Peter and Leitenberger, Wolfram and Navirian, Hengameh and Sander, Mathias and Goldshteyn, Jevgenij and Vrejoiu, Ionela and Bargheer, Matias}, title = {Direct time-domain sampling of subterahertz coherent acoustic phonon spectra in SrTiO3 using ultrafast x-ray diffraction}, series = {Physical review : B, Condensed matter and materials physics}, volume = {87}, journal = {Physical review : B, Condensed matter and materials physics}, number = {18}, publisher = {American Physical Society}, address = {College Park}, issn = {1098-0121}, doi = {10.1103/PhysRevB.87.184301}, pages = {7}, year = {2013}, abstract = {We synthesize sub-THz longitudinal quasimonochromatic acoustic phonons in a SrTiO3 single crystal using a SrRuO3/SrTiO3 superlattice as an optical-acoustic transducer. The generated acoustic phonon spectrum is determined using ultrafast x-ray diffraction. The analysis of the generated phonon spectrum in the time domain reveals a k-vector dependent phonon lifetime. It is observed that even at sub-THz frequencies the phonon lifetime agrees with the 1/omega(2) power law known from Akhiezer's model for hyper sound attenuation. The observed shift of the synthesized spectrum to the higher q is discussed in the framework of nonlinear effects appearing due to the high amplitude of the synthesized phonons.}, language = {en} } @article{OmranianKlieMuellerRoeberetal.2013, author = {Omranian, Nooshin and Klie, Sebastian and M{\"u}ller-R{\"o}ber, Bernd and Nikoloski, Zoran}, title = {Network-based segmentation of biological multivariate time series}, series = {PLoS one}, volume = {8}, journal = {PLoS one}, number = {5}, publisher = {PLoS}, address = {San Fransisco}, issn = {1932-6203}, doi = {10.1371/journal.pone.0062974}, pages = {10}, year = {2013}, abstract = {Molecular phenotyping technologies (e.g., transcriptomics, proteomics, and metabolomics) offer the possibility to simultaneously obtain multivariate time series (MTS) data from different levels of information processing and metabolic conversions in biological systems. As a result, MTS data capture the dynamics of biochemical processes and components whose couplings may involve different scales and exhibit temporal changes. Therefore, it is important to develop methods for determining the time segments in MTS data, which may correspond to critical biochemical events reflected in the coupling of the system's components. Here we provide a novel network-based formalization of the MTS segmentation problem based on temporal dependencies and the covariance structure of the data. We demonstrate that the problem of partitioning MTS data into k segments to maximize a distance function, operating on polynomially computable network properties, often used in analysis of biological network, can be efficiently solved. To enable biological interpretation, we also propose a breakpoint-penalty (BP-penalty) formulation for determining MTS segmentation which combines a distance function with the number/length of segments. Our empirical analyses of synthetic benchmark data as well as time-resolved transcriptomics data from the metabolic and cell cycles of Saccharomyces cerevisiae demonstrate that the proposed method accurately infers the phases in the temporal compartmentalization of biological processes. In addition, through comparison on the same data sets, we show that the results from the proposed formalization of the MTS segmentation problem match biological knowledge and provide more rigorous statistical support in comparison to the contending state-of-the-art methods.}, language = {en} } @article{NitschkeWangSchmiederetal.2013, author = {Nitschke, Felix and Wang, Peixiang and Schmieder, Peter and Girard, Jean-Marie and Awrey, Donald E. and Wang, Tony and Israelian, Johan and Zhao, XiaoChu and Turnbull, Julie and Heydenreich, Matthias and Kleinpeter, Erich and Steup, Martin and Minassian, Berge A.}, title = {Hyperphosphorylation of glucosyl C6 carbons and altered structure of glycogen in the neurodegenerative epilepsy lafora disease}, series = {Cell metabolism}, volume = {17}, journal = {Cell metabolism}, number = {5}, publisher = {Cell Press}, address = {Cambridge}, issn = {1550-4131}, doi = {10.1016/j.cmet.2013.04.006}, pages = {756 -- 767}, year = {2013}, abstract = {Laforin or malin deficiency causes Lafora disease, characterized by altered glycogen metabolism and teenage-onset neurodegeneration with intractable and invariably fatal epilepsy. Plant starches possess small amounts of metabolically essential monophosphate esters. Glycogen contains similar phosphate amounts, which are thought to originate from a glycogen synthase error side reaction and therefore lack any specific function. Glycogen is also believed to lack monophosphates at glucosyl carbon C6, an essential phosphorylation site in plant starch metabolism. We now show that glycogen phosphorylation is not due to a glycogen synthase side reaction, that C6 is a major glycogen phosphorylation site, and that C6 monophosphates predominate near centers of glycogen molecules and positively correlate with glycogen chain lengths. Laforin or malin deficiency causes C6 hyperphosphorylation, which results in malformed long-chained glycogen that accumulates in many tissues, causing neurodegeneration in brain. Our work advances the understanding of Lafora disease pathogenesis and suggests that glycogen phosphorylation has important metabolic function.}, language = {en} } @article{MulanskyPikovskij2013, author = {Mulansky, Mario and Pikovskij, Arkadij}, title = {Energy spreading in strongly nonlinear disordered lattices}, series = {New journal of physics : the open-access journal for physics}, volume = {15}, journal = {New journal of physics : the open-access journal for physics}, number = {5}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1367-2630}, doi = {10.1088/1367-2630/15/5/053015}, pages = {23}, year = {2013}, abstract = {We study the scaling properties of energy spreading in disordered strongly nonlinear Hamiltonian lattices. Such lattices consist of nonlinearly coupled local linear or nonlinear oscillators, and demonstrate a rather slow, subdiffusive spreading of initially localized wave packets. We use a fractional nonlinear diffusion equation as a heuristic model of this process, and confirm that the scaling predictions resulting from a self-similar solution of this equation are indeed applicable to all studied cases. We show that the spreading in nonlinearly coupled linear oscillators slows down compared to a pure power law, while for nonlinear local oscillators a power law is valid in the whole studied range of parameters.}, language = {en} } @article{KralemannPikovskijRosenblum2013, author = {Kralemann, Bj{\"o}rn and Pikovskij, Arkadij and Rosenblum, Michael}, title = {Detecting triplet locking by triplet synchronization indices}, series = {Physical review : E, Statistical, nonlinear and soft matter physics}, volume = {87}, journal = {Physical review : E, Statistical, nonlinear and soft matter physics}, number = {5}, publisher = {American Physical Society}, address = {College Park}, issn = {1539-3755}, doi = {10.1103/PhysRevE.87.052904}, pages = {6}, year = {2013}, abstract = {We discuss the effect of triplet synchrony in oscillatory networks. In this state the phases and the frequencies of three coupled oscillators fulfill the conditions of a triplet locking, whereas every pair of systems remains asynchronous. We suggest an easy to compute measure, a triplet synchronization index, which can be used to detect such states from experimental data.}, language = {en} } @article{MirhajBoitRazzaketal.2013, author = {Mirhaj, M. and Boit, Alice and Razzak, M. A. and Wahab, M. A.}, title = {Yield performance comparison between cultures of rice cum prawn (Macrobrachium rosenbergii) and rice cum fish (Cyprinus carpio, Oreochromis niloticus) in North-Eastern Bangladesh}, series = {Aquaculture : an international journal devoted to research on the exploration and improvement of all aquatic food resources, both floristic and faunistic, from freshwater, brackish and marine environment, related directly or indirectly to human consumption}, volume = {392}, journal = {Aquaculture : an international journal devoted to research on the exploration and improvement of all aquatic food resources, both floristic and faunistic, from freshwater, brackish and marine environment, related directly or indirectly to human consumption}, number = {5}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0044-8486}, doi = {10.1016/j.aquaculture.2013.01.038}, pages = {26 -- 33}, year = {2013}, abstract = {Integrated and concurrent cultures in rice fields are a promising approach to sustainable farming as the demand for aquacultural and agricultural products continues to grow while land and water resources become increasingly scarce. Prawn farming mainly takes place in coastal regions in improved extensive to semi-intensive aquacultures but a trend to shift the industry to inland regions has been noticed. This inland study in Northern Bangladesh used different input regimes such as fertilizer and additional feed to compare the performance of prawn and fish in flooded paddy fields in regard to water quality measurements. Maximal net yields and body weight gain with minimized negative impact on water quality were found when initial body weights of prawn were optimized. Regarding yield factors in reference to the reduction of costs due to the avoidance of expensive fertilizer/feed and effort, prawn performed better than integrated fish cultures considering a higher market value of prawn with net yields of up to 97 +/- 55 kg ha(-1) for unfed and 151 +/- 61 kg ha(-1) for fed treatments. Rice yields of up to 4.7 +/- 0.1 t ha(-1) for unfed and 4.4 +/- 0.1 t ha(-1) were achieved for fed treatments. The findings suggest that for small scale farmers, prawn cum rice cultures are an economically profitable and comparatively easily manageable alternative to rice cum fish cultures.}, language = {en} }