@article{FokouMeier2010, author = {Fokou, Patrice A. and Meier, Michael A. R.}, title = {Studying and suppressing olefin isomerization side reactions during ADMET polymerizations}, issn = {1022-1336}, doi = {10.1002/marc.200900678}, year = {2010}, abstract = {Olefin isomerization side reactions that occur during ADMET polymerizations were studied by preparing polyesters via ADMET and subsequently degrading these polyesters via transesterification with methanol. The resulting diesters, representing the repeating units of the previously prepared polyesters, were then analyzed by GC-MS. This strategy allowed quantification of the amount of olefin isomerization that took place during ADMET polymerization with second generation ruthenium metathesis catalysts. In a second step, it was shown that the addition of benzoquinone to the polymerization mixture prevented the olefin isomerization. Therefore, second generation ruthenium metathesis catalysts may now be used for the preparation of well-defined polymers via ADMET with very little isomerization, which was not possible before.}, language = {en} } @article{BaranacStojanovicKlaumuenzerMarkovicetal.2010, author = {Baranac-Stojanovic, Marija and Klaumuenzer, Ute and Markovic, Rade and Kleinpeter, Erich}, title = {Structure, configuration, conformation and quantification of the push pull-effect of 2-alkylidene-4- thiazolidinones and 2-alkylidene-4,5-fused bicyclic thiazolidine derivatives}, issn = {0040-4020}, doi = {10.1016/j.tet.2010.09.040}, year = {2010}, abstract = {Structures of a series of push-pull 2-alkylidene-4-thiazolidinones and 2-alkylidene-4,5-fused bicyclic thiazolidine derivatives were optimized at the B3LYP/6-31G(d) level of theory in the gas phase and discussed with respect to configurational and conformational stability. Employing the GIAO method, C-13 NMR chemical shifts of the C-2, C-2', C-4 and C-5 atoms were calculated at the same level of theory in the gas phase and with inclusion of solvent, and compared with experimental data. Push-pull effect of all compounds was quantified by means of the quotient pi*/pi, length of the partial double bond, C-13 NMR chemical shift difference (Delta delta(C=C)) and H-1 NMR chemical shifts of olefinic protons. The effect of bromine on donating and accepting ability of other substituents of the push- pull C=C double bond is discussed, too.}, language = {en} } @article{SchwarzBodenthinGeueetal.2010, author = {Schwarz, Guntram and Bodenthin, Yves and Geue, Thomas and Koetz, Joachim and Kurth, Dirk G.}, title = {Structure and properties of dynamic rigid rod-like metallo-supramolecular polyelectrolytes in solution}, issn = {0024-9297}, doi = {10.1021/Ma902057f}, year = {2010}, abstract = {Metal-ion-induced self-assembly in aqueous solution of the rigid ligand 1,4-bis(2,2':6',2 ''-terpyridine-4'-yl)benzene (1) with Fe(OAc)(2) and Ni(OAc)(2) is investigated with viscosimetry, SANS, and AFM. Ligand 1 forms extended, rigid-rod like metallo-supramolecular coordination polyeectrolytes (MEPEs) with a molar mass of up to 200 000 g mol(-1) under the Current experimental conditions. The molar mass depends oil concentration, stoichiometry, and time. By spin-coating MEPEs oil a solid surface, we call image the MEPEs in real space by AFM. Both AFM and SANS confirm the extended rigid-rod-type structure of the MEPEs. As a control experiment, we also studied the flexible ligand 1,3-bis[4'-oxa(2,2':6',2 ''-terpyridinyl)]propane (2). Ligand 2 does not form extended macro-assemblies but likely ringlike structures with three 10 four repeat units. Finally, we present it protocol to control the stoichiometry during self-assembly using conductometry, which is of paramount importance to obtain meaningful and reproducible results.}, language = {en} } @article{TiseanuParvulescuParvulescuetal.2010, author = {Tiseanu, Carmen and Parvulescu, Vasile and Parvulescu, Victoria and Cotoi, Elena and Gessner, Andre and Kumke, Michael Uwe and Simon, Simion and Vasiliu, Florin}, title = {Structural and photoluminescence characterization of mesoporous silicon-phosphates}, issn = {1010-6030}, doi = {10.1016/j.jphotochem.2010.07.015}, year = {2010}, abstract = {Two different types of mesoporous silicon-phosphate supports using different surfactants (a mixture of (CH3)(3)C13H27NBr with an organophosphorus coupling molecule (HO-PO(i-C3H7)(2)) and with a co-surfactant ((C2H5)(3)(C6H5)PCl), respectively) were synthesized. Trivalent europium (Eu) ions were immobilized via ion-exchange on these supports. The resulting materials were characterized using nitrogen adsorption isotherms at -196 degrees C, thermogravimetric analysis, SEM, TEM, FT-IR, PXRD, CP/MAS. (HSi)-H-1-Si-29 and P-31 NMR, DR-UV-vis as well as steady- state and time-resolved photoluminescence spectroscopy. The results evidenced that the co-polymerization of silicon and phosphorous yielded a unique morphology in these materials. Following calcination at 450 and 900 degrees C europium- exchanged silicon-phosphates with great surface area (BET=600-705 m(2) g(-1)) and 3.4 nm sized mesopores were obtained. The differences among the optical properties of the non-calcined europium materials such as the emission lifetimes, local environment at the europium sites or the relative contribution of the upper excited levels to the total photoluminescence were assigned to the surfactants used in the synthesis. Calcination of the silicon-phosphates at higher temperatures than 450 degrees C did not induce major changes in the structural properties: in contrast, photoluminescence properties of europium were markedly improved in terms of intensity and average lifetime.}, language = {en} } @article{BouaklineAlthorpeLarregarayetal.2010, author = {Bouakline, Foudhil and Althorpe, Stuart C. and Larregaray, Pascal and Bonnet, Laurent}, title = {Strong geometric-phase effects in the hydrogen-exchange reaction at high collision energies : II. quasiclassical trajectory analysis}, issn = {0026-8976}, doi = {10.1080/00268971003610218}, year = {2010}, abstract = {Recent calculations on the hydrogen-exchange reaction [Bouakline et al., J. Chem. Phys. 128, 124322 (2008)], have found strong geometric phase (GP) effects in the state-to-state differential cross-sections (DCS), at energies above the energetic minimum of the conical intersection (CI) seam, which cancel out in the integral cross-sections (ICS). In this article, we explain the origin of this cancellation and make other predictions about the nature of the reaction mechanisms at these high energies by carrying out quasiclassical trajectory (QCT) calculations. Detailed comparisons are made with the quantum results by splitting the quantum and the QCT cross-sections into contributions from reaction paths that wind in different senses around the CI and that scatter the products in the nearside and farside directions. Reaction paths that traverse one transition state (1-TS) scatter their products in just the nearside direction, whereas paths that traverse two transition states (2-TS) scatter in both the nearside and farside directions. However, the nearside 2-TS products scatter into a different region of angular phase-space than the 1-TS products, which explains why the GP effects cancel out in the ICS. Analysis of the QCT results also suggests that two separate reaction mechanisms may be responsible for the 2-TS scattering at high energies.}, language = {en} } @article{FuechselKlamrothTremblayetal.2010, author = {F{\"u}chsel, Gernot and Klamroth, Tillmann and Tremblay, Jean Christophe and Saalfrank, Peter}, title = {Stochastic approach to laser-induced ultrafast dynamics : the desorption of H-2/D-2 from Ru(0001)}, issn = {1463-9076}, doi = {10.1039/C0cp00895h}, year = {2010}, abstract = {The desorption of molecular hydrogen and deuterium induced by femtosecond-laser pulses is studied theoretically for the so-called DIMET (Desorption Induced by Multiple Electronic Transitions) process. These investigations are based on nonadiabatic classical Monte Carlo trajectory (CMCT) simulations on a ground and an excited state potential energy surface, including up to all six adsorbate degrees of freedom. The focus is on the hot-electron mediated energy transfer from the surface to the molecule and back, and the energy partitioning between the different degrees of freedom of the desorbing molecules. We first validate for a two-mode model comprising the desorption mode and the internal vibrational coordinate, the classical Monte Carlo trajectory method by comparing with Monte Carlo wavepacket (MCWP) calculations arising from a fully quantum mechanical open-system density matrix treatment. We then proceed by extending the CMCT calculations to include all six nuclear degrees of freedom of the desorbing molecule. This allows for a detailed comparison between theory and experiment concerning isotope effects, energy partitioning (translational, vibrational, and rotational energies and their distributions), and the dependence of these properties on the laser fluence. The most important findings are as follows. (i) CMCT agrees qualitative with the MCWP scheme. (ii) The basic experimental features such as the large isotope effect, the non-linear increase of yield with laser fluence, translationally hot products (in the order of several 1000 K) and non-equipartitioning of translational and internal energies (E-trans > E- vib > E-rot) are well reproduced. (iii) Predictions concerning a strong angular dependence of translational energies at large observation angles are also made.}, language = {en} } @article{KramerKleinpeter2010, author = {Kramer, Markus and Kleinpeter, Erich}, title = {STD-DOSY : a new NMR method to analyze multi-component enzyme/substrate systems}, issn = {1090-7807}, doi = {10.1016/j.jmr.2009.11.007}, year = {2010}, abstract = {A new approach to analyze multi-component Saturation Transfer Difference (STD) NMR spectra by combining the STD and the DOSY experiment is proposed. The resulting pulse sequence was successfully used to simplify an exemplary multi- component protein/substrate system by means of standard DOSY processing methods. Furthermore, the same experiment could be applied to calculate the ratio of saturated substrate molecules and its saturation rate in the case of competitive interactions. This ratio depends on the strength of this interaction between the substrates and the protein, so that this kind of information could be extracted from the results of our experiment.}, language = {en} } @article{StarkeKammerHoldtetal.2010, author = {Starke, Ines and Kammer, Stefan and Holdt, Hans-J{\"u}rgen and Kleinpeter, Erich}, title = {Stability of disubstituted copper complexes in the gas phase analyzed by electrospray ionization mass spectrometry}, issn = {0951-4198}, doi = {10.1002/Rcm.4519}, year = {2010}, abstract = {A series of nitrogen ligand (L)/copper complexes of the type [(CuL)-L-I](+), [(CuL)-L-II(X)](+) and [(CuL2)-L- I](+) (X = Cl-, BF4-, acac(-), CH3COO- and SO3CF3-) was studied in the gas phase by electrospray ionization mass spectrometry. The following ligands (L) were employed: 1,12-diazaperylene (dap), 1,1'-bisiso-quinoline (bis), 2,2'-bipyridine (bpy), 1,10-phenanthroline (phen), 2,11-disubstituted 1,12-diazaperylenes (dap), 3,3'- disubstituted 1,1'-bisisoquinoline (bis), 5,8-dimethoxy-substituted diazaperylene (meodap), 6,6'-dimethoxy- substituted bisisoquinoline (meobis) and 2,9-dimethyl-1,10-phenanthroline (dmphen). Collision-induced decomposition measurements were applied to evaluate the relative stabilities of the different copper complexes. The influence of the spatial arrangement of the ligands, of the type of substituents and of the counter ion of the copper salts employed for the complexation was examined. Correlations were found between the binding constants of the [ML2](+) complexes in solution and the relative stabilities of the analogous complexes in the gas phase. Furthermore, complexation with the ligands 2,11-dialkylated 1,12-diazaperylenes [alkyl = ethyl (dedap) and isopropyl (dipdap)] was studied in the solvents CH3OH and CH3CN.}, language = {en} } @article{WischerhoffBadiLutzetal.2010, author = {Wischerhoff, Erik and Badi, Nezha and Lutz, Jean-Francois and Laschewsky, Andr{\´e}}, title = {Smart bioactive surfaces}, issn = {1744-683X}, doi = {10.1039/B913594d}, year = {2010}, abstract = {The purpose of this highlight is to define the emerging field of bioactive surfaces. In recent years, various types of synthetic materials capable of "communicating'' with biological objects such as nucleic acids, proteins, polysaccharides, viruses, bacteria or living cells have been described in the literature. This novel area of research certainly goes beyond the traditional field of smart materials and includes different types of sophisticated interactions with biological entities, such as reversible adhesion, conformational control, biologically-triggered release and selective permeation. These novel materials may be 2D planar surfaces as well as colloidal objects or 3D scaffolds. Overall, they show great promise for numerous applications in biosciences and biotechnology. For instance, practical applications of bioactive surfaces in the fields of bioseparation, cell engineering, biochips and stem-cell differentiation are briefly discussed herein.}, language = {en} } @article{WitzelGoetzeEbenhoeh2010, author = {Witzel, Franziska and Goetze, Jan and Ebenhoeh, Oliver}, title = {Slow deactivation of ribulose 1,5-bisphosphate carboxylase/oxygenase elucidated by mathematical models}, issn = {1742-464X}, doi = {10.1111/j.1742-4658.2009.07541.x}, year = {2010}, abstract = {Ribulose 1,5-bisphosphate carboxylase/oxygenase (RuBisCO) is the key enzyme of the Calvin cycle, catalyzing the fixation of inorganic carbon dioxide to organic sugars. Unlike most enzymes, RuBisCO is extremely slow, substrate unspecific, and catalyzes undesired side-reactions, which are considered to be responsible for the slow deactivation observed in vitro, a phenomenon known as fallover. Despite the fact that amino acid sequences and the 3D structures of RuBisCO from a variety of species are known, the precise molecular mechanisms for the various side reactions are still unclear. In the present study, we investigate the kinetic properties of RuBisCO using mathematical models. Initially, we formulate a minimal model that quantitatively reflects the kinetic behavior of RuBisCOs from different organisms. By relating rate parameters for single molecular steps to experimentally determined K-m and V-max values, we can examine mechanistic differences among species. The minimal model further demonstrates that two inhibitor producing side reactions are sufficient to describe experimentally determined fallover kinetics. To explain the observed kinetics of the limited capacity of RuBisCO to accept xylulose 1,5-bisphosphate as substrate, the inclusion of other side reactions is necessary. Our model results suggest a yet undescribed alternative enolization mechanism that is supported by the molecular structure. Taken together, the presented models serve as a theoretical framework to explain a wide range of observed kinetic properties of RuBisCOs derived from a variety of species. Thus, we can support hypotheses about molecular mechanisms and can systematically compare enzymes from different origins.}, language = {en} }