@phdthesis{Boese2017,
  author    = {Boese, Adrian Daniel},
  title     = {Theorie und Berechnung intermolekularer Wechselwirkungen},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-412867},
  school      = {Universit{\"a}t Potsdam},
  pages     = {235},
  year      = {2017},
  abstract  = {Die klassische Physik/Chemie unterscheidet zwischen drei Bindungstypen: Der kovalenten Bindung, der ionischen Bindung und der metallischen Bindung. Molek{\"u}le untereinander werden hingegen durch schwache Wechselwirkungen zusammen gehalten, sie sind trotz ihrer schwachen Kr{\"a}fte weniger verstanden, aber dabei nicht weniger wichtig. In zukunftsweisenden Gebieten wie der Nanotechnologie, der Supramolekularen Chemie und Biochemie sind sie von elementarer Bedeutung. Um schwache, intermolekulare Wechselwirkungen zu beschreiben, vorauszusagen und zu verstehen, sind sie zun{\"a}chst theoretisch zu erfassen. Hierzu geh{\"o}ren verschiedene quantenchemische Methoden, die in dieser Arbeit vorgestellt, verglichen, weiterentwickelt und schließlich auch exemplarisch auf Problemstellungen in der Chemie angewendet werden. Aufbauend auf einer Hierarchie von Methoden unterschiedlicher Genauigkeit werden sie f{\"u}r diese Ziele eingesetzt, ausgearbeitet und kombiniert. Berechnet wird die Elektronenstruktur, also die Verteilung und Energie von Elektronen, die im Wesentlichen die Atome zusammen halten. Da Ungenauigkeiten von der Beschreibung der Elektronenstruktur von den verwendeten Methoden abh{\"a}ngen, kann man die Effekte detailliert untersuchen, sie beschreiben und darauf aufbauend weiter entwickeln, um sie anschließend an verschiedenen Modellen zu testen. Die Geschwindigkeit der Berechnungen mit modernen Computern ist eine wesentliche, zu ber{\"u}cksichtigende Komponente, da im Allgemeinen die Genauigkeit mit der Rechenzeit exponentiell steigt, und die damit an die Grenzen der M{\"o}glichkeiten stoßen muss. Die genaueste der verwendeten Methoden basiert auf der Coupled-Cluster-Theorie, die sehr gute Voraussagen erm{\"o}glicht. F{\"u}r diese wird eine sogenannte spektroskopische Genauigkeit mit Abweichungen von wenigen Wellenzahlen erzielt, was Vergleiche mit experimentellen Daten zeigen. Eine M{\"o}glichkeit zur N{\"a}herung von hochgenauen Methoden basiert auf der Dichtefunktionaltheorie: Hier wurde das „Boese-Martin for Kinetics" (BMK)-Funktional entwickelt, dessen Funktionalform sich in vielen nach 2010 ver{\"o}ffentlichten Dichtefunktionalen wiederfindet. Mit Hilfe der genaueren Methoden lassen sich schließlich semiempirische Kraftfelder zur Beschreibung intermolekularer Wechselwirkungen f{\"u}r individuelle Systeme parametrisieren, diese ben{\"o}tigen weit weniger Rechenzeit als die Methoden, die auf der genauen Berechnung der Elektronenstruktur von Molek{\"u}len beruhen. F{\"u}r gr{\"o}ßere Systeme lassen sich auch verschiedene Methoden kombinieren. Dabei wurden Einbettungsverfahren verfeinert und mit neuen methodischen Ans{\"a}tzen vorgeschlagen. Sie verwenden sowohl die symmetrieadaptierte St{\"o}rungstheorie als auch die quantenchemische Einbettung von Fragmenten in gr{\"o}ßere, quantenchemisch berechnete Systeme. Die Entwicklungen neuer Methoden beziehen ihren Wert im Wesentlichen durch deren Anwendung: In dieser Arbeit standen zun{\"a}chst die Wasserstoffbr{\"u}cken im Vordergrund. Sie z{\"a}hlen zu den st{\"a}rkeren intermolekularen Wechselwirkungen und sind nach wie vor eine Herausforderung. Im Gegensatz dazu sind van-der-Waals Wechselwirkungen relativ einfach durch Kraftfelder zu beschreiben. Deshalb sind viele der heute verwendeten Methoden f{\"u}r Systeme, in denen Wasserstoffbr{\"u}cken dominieren, vergleichsweise schlecht. Eine Untersuchung molekularer Aggregate mit Auswirkungen intermolekularer Wechselwirkungen auf die Schwingungsfrequenzen von Molek{\"u}len schließt sich an. Dabei wird auch {\"u}ber die sogenannte starrer-Rotor-harmonischer-Oszillator-N{\"a}herung hinausgegangen. Eine weitreichende Anwendung behandelt Adsorbate, hier die von Molek{\"u}len auf ionischen/metallischen Oberfl{\"a}chen. Sie k{\"o}nnen mit {\"a}hnlichen Methoden behandelt werden wie die intermolekularen Wechselwirkungen, und sind mit speziellen Einbettungsverfahren sehr genau zu beschreiben. Die Resultate dieser theoretischen Berechnungen stimulierten eine Neubewertung der bislang bekannten experimentellen Ergebnisse. Molekulare Kristalle sind ein {\"a}ußerst wichtiges Forschungsgebiet. Sie werden durch schwache Wechselwirkungen zusammengehalten, die von van-der-Waals Kr{\"a}ften bis zu Wasserstoffbr{\"u}cken reichen. Auch hier wurden neuentwickelte Methoden eingesetzt, die eine interessante, mindestens ebenso genaue Alternative zu den derzeit g{\"a}ngigen Methoden darstellen. Von daher sind die entwickelten Methoden, als auch deren Anwendung {\"a}ußerst vielf{\"a}ltig. Die behandelten Berechnungen der Elektronenstruktur erstrecken sich von den sogenannten post-Hartree-Fock-Methoden {\"u}ber den Einsatz der Dichtefunktionaltheorie bis zu semiempirischen Kraftfeldern und deren Kombinationen. Die Anwendung reicht von einzelnen Molek{\"u}len in der Gasphase {\"u}ber die Adsorption auf Oberfl{\"a}chen bis zum molekularen Festk{\"o}rper.},
  language  = {de}
}
@phdthesis{Bouakline2023,
  author    = {Bouakline, Foudhil},
  title     = {Manifestations of Quantum-Mechanical Effects in Molecular Reaction Dynamics},
  school      = {Universit{\"a}t Potsdam},
  pages     = {316},
  year      = {2023},
  abstract  = {This habilitation thesis summarises the research work performed by the author during the last quindecennial period. The dissertation reflects his main research interests, which revolve around quantum dynamics of small-sized molecular systems, including their interactions with electromagnetic radiation or dissipative environments. This covers various dynamical processes that involve bound-bound, bound-free, and free-free molecular transitions. The latter encompass light-triggered rovibrational or rovibronic dynamics in bound molecules, molecular photodissociation induced by weak or strong laser fields, state-to-state reactive and/or inelastic molecular collisions, and phonon-driven vibrational relaxation of adsorbates at solid surfaces. Although the dissertation covers different topics of molecular reaction dynamics, most of these studies focus on nuclear quantum effects and their manifestations in experimental measures. The latter are assessed through comparison between quantum and classical predictions, and/or direct confrontation of theory and experiment. Most well known quantum concepts and effects will be encountered in this work. Yet, almost all these quantum notions find their roots in the central pillar of quantum theory, namely, the quantum superposition principle. Indeed, quantum coherence is the main source of most quantum effects, including interference, entanglement, and even tunneling. Thus, the common and predominant theme of all the investigations of this thesis is quantum coherence, and the survival or quenching of subsequent interference effects in various molecular processes. The lion's share of the dissertation is devoted to two associated quantum concepts, which are usually overlooked in computational molecular dynamics, viz. the Berry phase and identical nuclei symmetry. The importance of the latter in dynamical molecular processes and their direct fingerprints in experimental observables also rely very much on quantum coherence and entanglement. All these quantum phenomena are thoroughly discussed within the four main topics that form the core of this thesis. Each topic is described in a separate chapter, where it is briefly summarised and then illustrated with three peer-reviewed publications. The first topic deals with the relevance of quantum coherence/interference in molecular collisions, with a focus on the hydrogen-exchange reaction, H+H2 --> H2+H, and its isotopologues. For these collision processes, the significance of interference of probability amplitudes arises because of the existence of two main scattering pathways. The latter could be inelastic and reactive scattering, direct and time-delayed scattering, or two encircling reaction paths that loop in opposite senses around a conical intersection (CI) of the H3 molecular system. Our joint theoretical-experimental investigations of these processes reveal strong interference and geometric phase (GP) effects in state-to-state reaction probabilities and differential cross sections. However, these coherent effects completely cancel in integral cross sections and reaction rate constants, due to efficient dephasing of interference between the different scattering amplitudes. As byproducts of these studies, we highlight the discovery of two novel scattering mechanisms, which contradict conventional textbook pictures of molecular reaction dynamics. The second topic concerns the effect of the Berry phase on molecular photodynamics at conical intersections. To understand this effect, we developed a topological approach that separates the total molecular wavefunction of an unbound molecular system into two components, which wind in opposite senses around the conical intersection. This separation reveals that the only effect of the geometric phase is to change the sign of the relative phase of these two components. This in turn leads to a shift in the interference pattern of the molecular system---a phase shift that is reminiscient of the celebrated Aharonov-Bohm effect. This procedure is numerically illustrated with photodynamics at model standard CIs, as well as strong-field dissociation of diatomics at light-induced conical intersections (LICIs). Besides the fundamental aspect of these studies, their findings allow to interpret and predict the effect of the GP on the state-resolved or angle-resolved spectra of pump-probe experimental schemes, particularly the distributions of photofragments in molecular photodissociation experiments. The third topic pertains to the role of the indistinguishability of identical nuclei in molecular reaction dynamics, with an emphasis on dynamical localization in highly symmetric molecules. The main object of these studies is whether nuclear-spin statistics allow dynamical localization of the electronic, vibrational, or even rotational density on a specific molecular substructure or configuration rather than on another one which is identical (indistinguishable). Group-theoretic analysis of the symmetrized molecular wavefunctions of these systems shows that nuclear permutation symmetry engenders quantum entanglement between the eigenstates of the different molecular degrees of freedom. This subsequently leads to complete quenching of dynamical localization over indistinguishable molecular substructures---an observation that is in sharp contradiction with well known textbook views of iconic molecular processes. This is illustrated with various examples of quantum dynamics in symmetric double-well achiral molecules, such as the prototypical umbrella inversion motion of ammonia, electronic Kekul{\´e} dynamics in the benzene molecule, and coupled electron-nuclear dynamics in laser-induced indirect photodissociation of the dihydrogen molecular cation. The last part of the thesis is devoted to the development of approximate wavefunction approaches for phonon-induced vibrational relaxation of adsorbates (system) at surfaces (bath). Due to the so-called 'curse of dimensionality', these system-bath complexes cannot be handled with standard wavefunction methods. To alleviate the exponential scaling of the latter, we developed approximate yet quite accurate numerical schemes that have a polynomial scaling with respect to the bath dimensionality. The corresponding algorithms combine symmetry-based reductions of the full vibrational Hilbert space and iterative Krylov techniques. These approximate wavefunction approaches resemble the 'Bixon-Jortner model' and the more general 'quantum tier model'. This is illustrated with the decay of H-Si (D-Si) vibrations on a fully H(D)-covered silicon surface, which is modelled with a phonon-bath of more than two thousand oscillators. These approximate methods allow reliable estimation of the adsorbate vibrational lifetimes, and provide some insight into vibration-phonon couplings at solid surfaces. Although this topic is mainly computational, the developed wavefunction approaches permit to describe quantum entanglement between the system and bath states, and to embody some coherent effects in the time-evolution of the (sub-)system, which cannot be accounted for with the widely used 'reduced density matrix formalism'.},
  language  = {en}
}
@phdthesis{Breternitz2023,
  author    = {Breternitz, Joachim},
  title     = {Structural systematic investigations of photovoltaic absorber materials},
  school      = {Universit{\"a}t Potsdam},
  pages     = {189},
  year      = {2023},
  abstract  = {The direct conversion of light from the sun into usable forms of energy marks one of the central cornerstones of the change of our living from the use of fossil, non-renewable energy resources towards a more sustainable economy. Besides the necessary societal changes necessary, it is the understanding of the solids employed that is of particular importance for the success of this target. In this work, the principles and approaches of systematic-crystallographic characterisation and systematisation of solids is used and employed to allow a directed tuning of the materials properties. The thorough understanding of the solid-state forms hereby the basis, on which more applied approaches are founded. Two material systems, which are considered as promising solar absorber materials, are at the core of this work: halide perovskites and II-IV-N2 nitride materials. While the first is renowned for its high efficiencies and rapid development in the last years, the latter is putting an emphasis on true sustainability in that toxic and scarce elements are avoided.},
  language  = {en}
}
@phdthesis{Boerner2009,
  author    = {B{\"o}rner, Hans Gerhard},
  title     = {Exploiting self-organization and functionality of peptides for polymer science},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-29066},
  school      = {Universit{\"a}t Potsdam},
  year      = {2009},
  abstract  = {Controlling interactions in synthetic polymers as precisely as in proteins would have a strong impact on polymer science. Advanced structural and functional control can lead to rational design of, integrated nano- and microstructures. To achieve this, properties of monomer sequence defined oligopeptides were exploited. Through their incorporation as monodisperse segments into synthetic polymers we learned in recent four years how to program the structure formation of polymers, to adjust and exploit interactions in such polymers, to control inorganic-organic interfaces in fiber composites and induce structure in Biomacromolecules like DNA for biomedical applications.},
  language  = {en}
}
@phdthesis{Faivre2014,
  author    = {Faivre, Damien},
  title     = {Biological and biomimetic formation and organization of magnetic nanoparticles},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-72022},
  school      = {Universit{\"a}t Potsdam},
  year      = {2014},
  abstract  = {Biological materials have ever been used by humans because of their remarkable properties. This is surprising since the materials are formed under physiological conditions and with commonplace constituents. Nature thus not only provides us with inspiration for designing new materials but also teaches us how to use soft molecules to tune interparticle and external forces to structure and assemble simple building blocks into functional entities. Magnetotactic bacteria and their chain of magnetosomes represent a striking example of such an accomplishment where a very simple living organism controls the properties of inorganics via organics at the nanometer-scale to form a single magnetic dipole that orients the cell in the Earth magnetic field lines. My group has developed a biological and a bio-inspired research based on these bacteria. My research, at the interface between chemistry, materials science, physics, and biology focuses on how biological systems synthesize, organize and use minerals. We apply the design principles to sustainably form hierarchical materials with controlled properties that can be used e.g. as magnetically directed nanodevices towards applications in sensing, actuating, and transport. In this thesis, I thus first present how magnetotactic bacteria intracellularly form magnetosomes and assemble them in chains. I developed an assay, where cells can be switched from magnetic to non-magnetic states. This enabled to study the dynamics of magnetosome and magnetosome chain formation. We found that the magnetosomes nucleate within minutes whereas chains assembles within hours. Magnetosome formation necessitates iron uptake as ferrous or ferric ions. The transport of the ions within the cell leads to the formation of a ferritin-like intermediate, which subsequently is transported and transformed within the magnetosome organelle in a ferrihydrite-like precursor. Finally, magnetite crystals nucleate and grow toward their mature dimension. In addition, I show that the magnetosome assembly displays hierarchically ordered nano- and microstructures over several levels, enabling the coordinated alignment and motility of entire populations of cells. The magnetosomes are indeed composed of structurally pure magnetite. The organelles are partly composed of proteins, which role is crucial for the properties of the magnetosomes. As an example, we showed how the protein MmsF is involved in the control of magnetosome size and morphology. We have further shown by 2D X-ray diffraction that the magnetosome particles are aligned along the same direction in the magnetosome chain. We then show how magnetic properties of the nascent magnetosome influence the alignment of the particles, and how the proteins MamJ and MamK coordinate this assembly. We propose a theoretical approach, which suggests that biological forces are more important than physical ones for the chain formation. All these studies thus show how magnetosome formation and organization are under strict biological control, which is associated with unprecedented material properties. Finally, we show that the magnetosome chain enables the cells to find their preferred oxygen conditions if the magnetic field is present. The synthetic part of this work shows how the understanding of the design principles of magnetosome formation enabled me to perform biomimetic synthesis of magnetite particles within the highly desired size range of 25 to 100 nm. Nucleation and growth of such particles are based on aggregation of iron colloids termed primary particles as imaged by cryo-high resolution TEM. I show how additives influence magnetite formation and properties. In particular, MamP, a so-called magnetochrome proteins involved in the magnetosome formation in vivo, enables the in vitro formation of magnetite nanoparticles exclusively from ferrous iron by controlling the redox state of the process. Negatively charged additives, such as MamJ, retard magnetite nucleation in vitro, probably by interacting with the iron ions. Other additives such as e.g. polyarginine can be used to control the colloidal stability of stable-single domain sized nanoparticles. Finally, I show how we can "glue" magnetic nanoparticles to form propellers that can be actuated and swim with the help of external magnetic fields. We propose a simple theory to explain the observed movement. We can use the theoretical framework to design experimental conditions to sort out the propellers depending on their size and effectively confirm this prediction experimentally. Thereby, we could image propellers with size down to 290 nm in their longer dimension, much smaller than what perform so far.},
  language  = {en}
}
@phdthesis{Giordano2014,
  author    = {Giordano, Cristina},
  title     = {A neglected world: transition metal nitride and metal carbide based nanostructures},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-75375},
  school      = {Universit{\"a}t Potsdam},
  pages     = {191},
  year      = {2014},
  abstract  = {Potentiality of nanosized materials has been largely proved but a closer look shows that a significant percentage of this research is related to oxides and metals, while the number drastically drops for metallic ceramics, namely transition metal nitrides and metal carbides. The lack of related publications do not reflect their potential but rather the difficulties related to their synthesis as dense and defect-free structures, fundamental prerequisites for advanced mechanical applications. The present habilitation work aims to close the gap between preparation and processing, indicating novel synthetic pathways for a simpler and sustainable synthesis of transition metal nitride (MN) and carbide (MC) based nanostructures and easier processing thereafter. In spite of simplicity and reliability, the designed synthetic processes allow the production of functional materials, with the demanded size and morphology. The goal was achieved exploiting classical and less-classical precursors, ranging from common metal salts and molecules (e.g. urea, gelatin, agar, etc), to more exotic materials, such as leafs, filter paper and even wood. It was found that the choice of precursors and reaction conditions makes it possible to control chemical composition (going for instance from metal oxides to metal oxy-nitrides to metal nitrides, or from metal nitrides to metal carbides, up to quaternary systems), size (from 5 to 50 nm) and morphology (going from mere spherical nanoparticles to rod-like shapes, fibers, layers, meso-porous and hierarchical structures, etc). The nature of the mixed precursors also allows the preparation of metal nitrides/carbides based nanocomposites, thus leading to multifunctional materials (e.g. MN/MC@C, MN/MC@PILs, etc) but also allowing dispersion in liquid media. Control over composition, size and morphology is obtained with simple adjustment of the main route, but also coupling it with processes such as electrospin, aerosol spray, bio-templating, etc. Last but not least, the nature of the precursor materials also allows easy processing, including printing, coating, casting, film and thin layers preparation, etc). The designed routes are, concept-wise, similar and they all start by building up a secondary metal ion-N/C precursor network, which converts, upon heat treatment, into an intermediate "glass". This glass stabilizes the nascent nanoparticles during their nucleation and impairs their uncontrolled growth during the heat treatment (scheme 1). This way, one of the main problems related to the synthesis of MN/MC, i.e. the need of very high temperature, could also be overcome (from up to 2000°C, for classical synthesis, down to 700°C in the present cases). The designed synthetic pathways are also conceived to allow usage of non-toxic compounds and to minimize (or even avoid) post-synthesis purification, still bringing to phase pure and well-defined (crystalline) nanoparticles. This research aids to simplify the preparation of MN/MC, making these systems now readily available in suitable amounts both for fundamental and applied science. The prepared systems have been tested (in some cases for the first time) in many different fields, e.g. battery (MnN0.43@C shown a capacity stabilized at a value of 230 mAh/g, with coulombic efficiencies close to 100\%), as alternative magnetic materials (Fe3C nanoparticles were prepared with different size and therefore different magnetic behavior, superparamagnetic or ferromagnetic, showing a saturation magnetization value up to 130 emu/g, i.e. similar to the value expected for the bulk material), as filters and for the degradation of organic dyes (outmatching the performance of carbon), as catalysts (both as active phase but also as active support, leading to high turnover rate and, more interesting, to tunable selectivity). Furthermore, with this route, it was possible to prepare for the first time, to the best of our knowledge, well-defined and crystalline MnN0.43, Fe3C and Zn1.7GeN1.8O nanoparticles via bottom-up approaches. Once the synthesis of these materials can be made straightforward, any further modification, combination, manipulation, is in principle possible and new systems can be purposely conceived (e.g. hybrids, nanocomposites, ferrofluids, etc).},
  language  = {en}
}
@phdthesis{Hermanns2021,
  author    = {Hermanns, Jolanda},
  title     = {Development, use and evaluation of concepts and materials for teaching organic chemistry at university},
  school      = {Universit{\"a}t Potsdam},
  year      = {2021},
  language  = {en}
}
@phdthesis{Kroener2013,
  author    = {Kr{\"o}ner, Dominik},
  title     = {Analysis and control of light-induced processes in molecules: Electron and nuclear quantum dynamics for aspects of stereoisomerism and spectroscopy},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-70477},
  school      = {Universit{\"a}t Potsdam},
  year      = {2013},
  abstract  = {The habilitation thesis covers theoretical investigations on light-induced processes in molecules. The study is focussed on changes of the molecular electronic structure and geometry, caused either by photoexcitation in the event of a spectroscopic analysis, or by a selective control with shaped laser pulses. The applied and developed methods are predominantly based on quantum chemistry as well as on electron and nuclear quantum dynamics, and in parts on molecular dynamics. The studied scientific problems deal with stereoisomerism and the question of how to either switch or distinguish chiral molecules using laser pulses, and with the essentials for the simulation of the spectroscopic response of biochromophores, in order to unravel their photophysics. The accomplished findings not only explain experimental results and extend existing approaches, but also contribute significantly to the basic understanding of the investigated light-driven molecular processes. The main achievements can be divided in three parts: First, a quantum theory for an enantio- and diastereoselective or, in general, stereoselective laser pulse control was developed and successfully applied to influence the chirality of molecular switches. The proposed axially chiral molecules possess different numbers of "switchable" stable chiral conformations, with one particular switch featuring even a true achiral "off"-state which allows to enantioselectively "turn on" its chirality. Furthermore, surface mounted chiral molecular switches with several well-defined orientations were treated, where a newly devised highly flexible stochastic pulse optimization technique provides high stereoselectivity and efficiency at the same time, even for coupled chirality-changing degrees of freedom. Despite the model character of these studies, the proposed types of chiral molecular switches and, all the more, the developed basic concepts are generally applicable to design laser pulse controlled catalysts for asymmetric synthesis, or to achieve selective changes in the chirality of liquid crystals or in chiroptical nanodevices, implementable in information processing or as data storage. Second, laser-driven electron wavepacket dynamics based on ab initio calculations, namely time-dependent configuration interaction, was extended by the explicit inclusion of magnetic field-magnetic dipole interactions for the simulation of the qualitative and quantitative distinction of enantiomers in mass spectrometry by means of circularly polarized ultrashort laser pulses. The developed approach not only allows to explain the origin of the experimentally observed influence of the pulse duration on the detected circular dichroism in the ion yield, but also to predict laser pulse parameters for an optimal distinction of enantiomers by ultrashort shaped laser pulses. Moreover, these investigations in combination with the previous ones provide a fundamental understanding of the relevance of electric and magnetic interactions between linearly or non-linearly polarized laser pulses and (pro-)chiral molecules for either control by enantioselective excitation or distinction by enantiospecific excitation. Third, for selected light-sensitive biological systems of central importance, like e.g. antenna complexes of photosynthesis, simulations of processes which take place during and after photoexcitation of their chromophores were performed, in order to explain experimental (spectroscopic) findings as well as to understand the underlying photophysical and photochemical principles. In particular, aspects of normal mode mixing due to geometrical changes upon photoexcitation and their impact on (time-dependent) vibronic and resonance Raman spectra, as well as on intramolecular energy redistribution were addressed. In order to explain unresolved experimental findings, a simulation program for the calculation of vibronic and resonance Raman spectra, accounting for changes in both vibrational frequencies and normal modes, was created based on a time-dependent formalism. In addition, the influence of the biochemical environment on the electronic structure of the chromophores was studied by electrostatic interactions and mechanical embedding using hybrid quantum-classical methods. Environmental effects were found to be of importance, in particular, for the excitonic coupling of chromophores in light-harvesting complex II. Although the simulations for such highly complex systems are still restricted by various approximations, the improved approaches and obtained results have proven to be important contributions for a better understanding of light-induced processes in biosystems which also adds to efforts of their artificial reproduction.},
  language  = {en}
}
@phdthesis{Kumke2005,
  author    = {Kumke, Michael Uwe},
  title     = {Huminstoffe und organische Modellliganden und ihre Wechselwirkung mit Metallionen und polyzyklischen aromatischen Kohlenwasserstoffen},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-6066},
  school      = {Universit{\"a}t Potsdam},
  year      = {2005},
  abstract  = {Immobilisierung bzw. Mobilisierung und Transport von Schadstoffen in der Umwelt, besonders in den Kompartimenten Boden und Wasser, sind von fundamentaler Bedeutung f{\"u}r unser ({\"U}ber)Leben auf der Erde. Einer der Hauptreaktionspartner f{\"u}r organische und anorganische Schadstoffe (Xenobiotika) in der Umwelt sind Huminstoffe (HS). HS sind Abbauprodukte pflanzlichen und tierischen Gewebes, die durch eine Kombination von chemischen und biologischen Ab- und Umbauprozessen entstehen. Bedingt durch ihre Genese stellen HS außerordentlich heterogene Stoffsysteme dar, die eine Palette von verschiedenartigen Wechselwirkungen mit Schadstoffen zeigen. Die Untersuchung der fundamentalen Wechselwirkungsmechanismen stellt ebenso wie deren quantitative Beschreibung h{\"o}chste Anforderungen an die Untersuchungsmethoden. Zur qualitativen und quantitativen Charakterisierung der Wechselwirkungen zwischen HS und Xenobiotika werden demnach analytische Methoden ben{\"o}tigt, die bei der Untersuchung von extrem heterogenen Systemen aussagekr{\"a}ftige Daten zu liefern verm{\"o}gen. Besonders spektroskopische Verfahren, wie z.B. lumineszenz-basierte Verfahren, besitzen neben der hervorragenden Selektivit{\"a}t und Sensitivit{\"a}t, auch eine Multidimensionalit{\"a}t (bei der Lumineszenz sind es die Beobachtungsgr{\"o}ßen Intensit{\"a}t IF, Anregungswellenl{\"a}nge lex, Emissionswellenl{\"a}nge lem und Fluoreszenzabklingzeit tF), die es gestattet, auch heterogene Systeme wie HS direkt zu untersuchen. Zur Charakterisierung k{\"o}nnen sowohl die intrinsischen Fluoreszenzeigenschaften der HS als auch die von speziell eingef{\"u}hrten Lumineszenzsonden verwendet werden. In beiden F{\"a}llen werden die zu Grunde liegenden fundamentalen Konzepte der Wechselwirkungen von HS mit Xenobiotika untersucht und charakterisiert. F{\"u}r die intrinsische Fluoreszenz der HS konnte gezeigt werden, dass neben molekularen Strukturen besonders die Verkn{\"u}pfung der Fluorophore im Gesamt-HS-Molek{\"u}l von Bedeutung ist. Konformative Freiheit und die Nachbarschaft zu als Energieakzeptor fungierenden HS-eigenen Gruppen sind wichtige Komponenten f{\"u}r die Charakteristik der HS-Fluoreszenz. Die L{\"o}schung der intrinsischen Fluoreszenz durch Metallkomplexierung ist demnach auch das Resultat der ver{\"a}nderten konformativen Freiheit der HS durch die gebundenen Metallionen. Es zeigte sich, dass abh{\"a}ngig vom Metallion sowohl L{\"o}schung als auch Verst{\"a}rkung der intrinsischen HS-Fluoreszenz beobachtet werden kann. Als extrinsische Lumineszenzsonden mit wohl-charakterisierten photophysikalischen Eigenschaften wurden polyzyklische aromatische Kohlenwasserstoffe und Lanthanoid-Ionen eingesetzt. Durch Untersuchungen bei sehr niedrigen Temperaturen (10 K) konnte erstmals die Mikroumgebung von an HS gebundenen hydrophoben Xenobiotika untersucht werden. Im Vergleich mit Raumtemperaturexperimenten konnte gezeigt werden, dass hydrophobe Xenobiotika an HS-gebunden in einer Mikroumgebung, die in ihrer Polarit{\"a}t analog zu kurzkettigen Alkoholen ist, vorliegen. F{\"u}r den Fall der Metallkomplexierung wurden Energietransferprozesse zwischen HS und Lanthanoidionen bzw. zwischen verschiedenen, gebundenen Lanthanoidionen untersucht. Basierend auf diesen Messungen k{\"o}nnen Aussagen {\"u}ber die beteiligten elektronischen Zust{\"a}nde der HS einerseits und Entfernungen von Metallbindungsstellen in HS selbst angeben werden. Es ist dabei zu beachten, dass die Experimente in L{\"o}sung bei realen Konzentrationen durchgef{\"u}hrt wurden. Aus Messung der Energietransferraten k{\"o}nnen direkte Aussagen {\"u}ber Konformations{\"a}nderungen bzw. Aggregationsprozesse von HS abgeleitet werden.},
  subject      = {Fluoreszenz},
  language  = {de}
}
@phdthesis{Schlaad2005,
  author    = {Schlaad, Helmut},
  title     = {Polymer self-assembly : adding complexity to mesostructures of diblock copolymers by specific interactions},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-0001824},
  school      = {Universit{\"a}t Potsdam},
  year      = {2005},
  abstract  = {In dieser Arbeit wurde die Rolle selektiver, nicht-kovalenter Wechselwirkungen bei der Selbstorganisation von Diblockcopolymeren untersucht. Durch Einf{\"u}hrung elektrostatischer, dipolarer Wechselwirkungen oder Wasserstoffbr{\"u}ckenbindungen sollte es gelingen, komplexe Mesostrukturen zu erzeugen und die Ordnung vom Nanometerbereich auf gr{\"o}ßere L{\"a}ngenskalen auszuweiten. Diese Arbeit ist im Rahmen von Biomimetik zu sehen, da sie Konzepte der synthetischen Polymer- und Kolloidchemie und Grundprinzipien der Strukturbildung in supramolekularen und biologischen Systemen verbindet. Folgende Copolymersysteme wurden untersucht: (i) Blockionomere, (ii) Blockcopolymere mit chelatisierenden Acetoacetoxyeinheiten und (iii) Polypeptid-Blockcopolymere.},
  language  = {en}
}