@article{CollingsRietbrockLangeetal.2013, author = {Collings, R. and Rietbrock, Andreas and Lange, Dietrich and Tilmann, F. and Nippress, Stuart and Natawidjaja, D.}, title = {Seismic anisotropy in the sumatra subduction zone}, series = {Journal of geophysical research : Solid earth}, volume = {118}, journal = {Journal of geophysical research : Solid earth}, number = {10}, publisher = {American Geophysical Union}, address = {Washington}, issn = {2169-9313}, doi = {10.1002/jgrb.50157}, pages = {5372 -- 5390}, year = {2013}, abstract = {An important tool for understanding deformation occurring within a subduction zone is the measurement of seismic anisotropy through observations of shear wave splitting (SWS). In Sumatra, two temporary seismic networks were deployed between December 2007 and February 2009, covering the fore arc between the fore-arc islands to the back arc. We use SKS and local SWS measurements to determine the type, amount, and location of anisotropy. Local SWS measurements from the fore-arc islands exhibit trench-parallel fast directions which can be attributed to shape preferred orientation of cracks/fractures in the overriding sediments. In the Sumatran Fault region, the predominant fast direction is fault/trench parallel, while in the back-arc region it is trench perpendicular. The trench-perpendicular measurements exhibit a positive correlation between delay time and raypath length in the mantle wedge, while the fault-parallel measurements are similar to the fault-parallel fast directions observed for two crustal events at the Sumatran Fault. This suggests that there are two layers of anisotropy: one due to entrained flow within the mantle wedge and a second layer within the overriding crust due to the shear strain caused by the Sumatran Fault. SKS splitting results show a NNW-SSE fast direction with delay times of 0.8-3.0s. The fast directions are approximately parallel to the absolute plate motion of the subducting Indo-Australian Plate. The small delay times exhibited by the local SWS (0.05-0.45s), in combination with the large SKS delay times, suggest that the anisotropy generating the teleseismic SWS is dominated by entrained flow in the asthenosphere below the slab.}, language = {en} } @article{EisoldSellrieSchenketal.2015, author = {Eisold, Ursula and Sellrie, Frank and Schenk, J{\"o}rg A. and Lenz, Christine and St{\"o}cklein, Walter F. M. and Kumke, Michael Uwe}, title = {Bright or dark immune complexes of anti-TAMRA antibodies for adapted fluorescence-based bioanalysis}, series = {Analytical \& bioanalytical chemistry}, volume = {407}, journal = {Analytical \& bioanalytical chemistry}, number = {12}, publisher = {Springer}, address = {Heidelberg}, issn = {1618-2642}, doi = {10.1007/s00216-015-8538-0}, pages = {3313 -- 3323}, year = {2015}, abstract = {Fluorescence labels, for example fluorescein or rhodamin derivatives, are widely used in bioanalysis applications including lateral-flow assays, PCR, and fluorescence microscopy. Depending on the layout of the particular application, fluorescence quenching or enhancement may be desired as the detection principle. Especially for multiplexed applications or high-brightness requirements, a tunable fluorescence probe can be beneficial. The alterations in the photophysics of rhodamine derivatives upon binding to two different anti-TAMRA antibodies were investigated by absorption and fluorescence-spectroscopy techniques, especially determining the fluorescence decay time and steady-state and time-resolved fluorescence anisotropy. Two monoclonal anti-TAMRA antibodies were generated by the hybridoma technique. Although surface-plasmon-resonance measurements clearly proved the high affinity of both antibodies towards 5-TAMRA, the observed effects on the fluorescence of rhodamine derivatives were very different. Depending on the anti-TAMRA antibody either a strong fluorescence quenching (G71-DC7) or a distinct fluorescence enhancement (G71-BE11) upon formation of the immune complex was observed. Additional rhodamine derivatives were used to gain further information on the binding interaction. The data reveal that such haptens as 5-TAMRA could generate different paratopes with equal binding affinities but different binding interactions, which provide the opportunity to adapt bioanalysis methods including immunoassays for optimized detection principles for the same hapten depending on the specific requirements.}, language = {en} } @article{HoangHaubitzKumke2018, author = {Hoang, Hoa T. and Haubitz, Toni and Kumke, Michael Uwe}, title = {Photophysics of "Floppy" Dyadsas Potential Biomembrane Probes}, series = {Journal of fluorescence}, volume = {28}, journal = {Journal of fluorescence}, number = {5}, publisher = {Springer}, address = {New York}, issn = {1053-0509}, doi = {10.1007/s10895-018-2286-4}, pages = {1225 -- 1237}, year = {2018}, abstract = {In the study a dyad (C6 probe), constructed of two dyes with highly different hydrophobicities, was investigated by steady-state and time-resolved spectroscopic techniques in chloroform, methanol, and in phospholipid vesicles, respectively. The dyad was built on two dyes: the lipophilic benzo[a]pyrene (BaP) and the hydrophilic sulforhodamine B (SRB). The dyes were linked via a short, but flexible alkyl chain (six C-atoms). Based on their spectroscopic properties, BaP and SRB showed a very efficient non-radiative resonance energy transfer in solution. Incorporation into a lipid bilayer limited the relative flexibility (degree of freedom) between donor and acceptor and was used for the investigation of fundamental photophysical aspects (especially of FRET) as well as to elucidate the potential of the dyad to probe the interface of vesicles (or cells). The location of the two dyes in vesicles and their respective accessibility for interactions with dye-specific antibodies was investigated. Based on the alteration of the anisotropy, on the rotational correlation time as well as on the diffusion coefficient the incorporation of the C6 probe into the vesicles was evaluated. Especially the limitation in the relative movements of the two dyes was considered and used to differentiate between potential parameters, that influence the energy transfer in the dyad. Transient absorption spectroscopy (TAS) and pulsed-interleave single molecule fluorescence experiments were performed to better understand the intramolecular interactions in the dyad. Finally, in a showcase for a biosensing application of the dyads, the binding of an SRB-specific antibody was investigated when the dyad was incorporated in vesicles.}, language = {en} } @misc{MakwanaYan2020, author = {Makwana, Kirit D. and Yan, Huirong}, title = {Properties of magnetohydrodynamic modes in compressively driven plasma turbulence}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, volume = {10}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {3}, publisher = {American Physical Society (APS)}, address = {College Park}, issn = {1866-8372}, doi = {10.25932/publishup-53160}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-531607}, pages = {17}, year = {2020}, abstract = {We study properties of magnetohydrodynamic (MHD) eigenmodes by decomposing the data of MHD simulations into linear MHD modes-namely, the Alfven, slow magnetosonic, and fast magnetosonic modes. We drive turbulence with a mixture of solenoidal and compressive driving while varying the Alfven Mach number (M-A), plasma beta, and the sonic Mach number from subsonic to transsonic. We find that the proportion of fast and slow modes in the mode mixture increases with increasing compressive forcing. This proportion of the magnetosonic modes can also become the dominant fraction in the mode mixture. The anisotropy of the modes is analyzed by means of their structure functions. The Alfven-mode anisotropy is consistent with the Goldreich-Sridhar theory. We find a transition from weak to strong Alfvenic turbulence as we go from low to high M-A. The slow-mode properties are similar to the Alfven mode. On the other hand, the isotropic nature of fast modes is verified in the cases where the fast mode is a significant fraction of the mode mixture. The fast-mode behavior does not show any transition in going from low to high M-A. We find indications that there is some interaction between the different modes, and the properties of the dominant mode can affect the properties of the weaker modes. This work identifies the conditions under which magnetosonic modes can be a major fraction of turbulent astrophysical plasmas, including the regime of weak turbulence. Important astrophysical implications for cosmic-ray transport and magnetic reconnection are discussed.}, language = {en} } @article{RheinwaltBoersMarwanetal.2016, author = {Rheinwalt, Aljoscha and Boers, Niklas and Marwan, Norbert and Kurths, J{\"u}rgen and Hoffmann, Peter and Gerstengarbe, Friedrich-Wilhelm and Werner, Peter}, title = {Non-linear time series analysis of precipitation events using regional climate networks for Germany}, series = {Climate dynamics : observational, theoretical and computational research on the climate system}, volume = {46}, journal = {Climate dynamics : observational, theoretical and computational research on the climate system}, publisher = {Springer}, address = {New York}, issn = {0930-7575}, doi = {10.1007/s00382-015-2632-z}, pages = {1065 -- 1074}, year = {2016}, abstract = {Synchronous occurrences of heavy rainfall events and the study of their relation in time and space are of large socio-economical relevance, for instance for the agricultural and insurance sectors, but also for the general well-being of the population. In this study, the spatial synchronization structure is analyzed as a regional climate network constructed from precipitation event series. The similarity between event series is determined by the number of synchronous occurrences. We propose a novel standardization of this number that results in synchronization scores which are not biased by the number of events in the respective time series. Additionally, we introduce a new version of the network measure directionality that measures the spatial directionality of weighted links by also taking account of the effects of the spatial embedding of the network. This measure provides an estimate of heavy precipitation isochrones by pointing out directions along which rainfall events synchronize. We propose a climatological interpretation of this measure in terms of propagating fronts or event traces and confirm it for Germany by comparing our results to known atmospheric circulation patterns.}, language = {en} } @article{SchusterRybackiBonnelyeetal.2021, author = {Schuster, Valerian and Rybacki, Erik and Bonnelye, Audrey and Herrmann, Johannes and Schleicher, Anja Maria and Dresen, Georg}, title = {Experimental deformation of opalinus clay at elevated temperature and pressure conditions}, series = {Rock mechanics and rock engineering}, volume = {54}, journal = {Rock mechanics and rock engineering}, publisher = {Springer}, address = {Wien}, issn = {0723-2632}, doi = {10.1007/s00603-021-02474-3}, pages = {4009 -- 4039}, year = {2021}, abstract = {The mechanical behavior of the sandy facies of Opalinus Clay (OPA) was investigated in 42 triaxial tests performed on dry samples at unconsolidated, undrained conditions at confining pressures (p(c)) of 50-100 MPa, temperatures (T) between 25 and 200 degrees C and strain rates (epsilon) (over dot ) of 1 x-10(-3)-5 x-10(-6) -s(-1). Using a Paterson-type deformation apparatus, samples oriented at 0 degrees, 45 degrees and 90 degrees to bedding were deformed up to about 15\% axial strain. Additionally, the influence of water content, drainage condition and pre-consolidation was investigated at fixed p(c)-T conditions, using dry and re-saturated samples. Deformed samples display brittle to semi-brittle deformation behavior, characterized by cataclastic flow in quartz-rich sandy layers and granular flow in phyllosilicate-rich layers. Samples loaded parallel to bedding are less compliant compared to the other loading directions. With the exception of samples deformed 45 degrees and 90 degrees to bedding at p(c) = 100 MPa, strain is localized in discrete shear zones. Compressive strength (sigma(max)) increases with increasing pc, resulting in an internal friction coefficient of approximate to 0.31 for samples deformed at 45 degrees and 90 degrees to bedding, and approximate to 0.44 for samples deformed parallel to bedding. In contrast, pre-consolidation, drainage condition, T and epsilon(over dot )do not significantly affect deformation behavior of dried samples. However, sigma(max) and Young's modulus (E) decrease substantially with increasing water saturation. Compared to the clay-rich shaly facies of OPA, sandy facies specimens display higher strength sigma(max) and Young's modulus E at similar deformation conditions. Strength and Young's modulus of samples deformed 90 degrees and 45 degrees to bedding are close to the iso-stress Reuss bound, suggesting a strong influence of weak clay-rich layers on the deformation behavior.}, language = {en} } @article{SevostianovBruno2018, author = {Sevostianov, Igor and Bruno, Giovanni}, title = {Maxwell scheme for internal stresses in multiphase composites}, series = {Mechanics of Materials}, volume = {129}, journal = {Mechanics of Materials}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0167-6636}, doi = {10.1016/j.mechmat.2018.12.005}, pages = {320 -- 331}, year = {2018}, abstract = {The paper focuses on the reformulation of classic Maxwell's (1873) homogenization method for calculation of the residual stresses in matrix composites. For this goal, we equate the far fields produced by a set of inhomogeneities subjected to known eigenstrains and by a fictitious domain with unknown eigenstrain. The effect of interaction between the inhomogeneities is reduced to the calculation of the additional field acting on an inhomogeneity due to the eigenstrains in its neighbors. An explicit formula for residual stresses is derived for the general case of a multiphase composite. The method is illustrated by several examples. The results are compared with available experimental data as well as with predictions provided by the non-interaction approximation (Eshelby solution). It is shown that accounting for interaction can explain many experimentally observed phenomena and is required for adequate quantitative analytical modeling of the residual stresses in matrix composites.}, language = {en} }