@article{ZoellerHolschneiderHainzletal.2014, author = {Z{\"o}ller, Gert and Holschneider, Matthias and Hainzl, Sebastian and Zhuang, Jiancang}, title = {The largest expected earthquake magnitudes in Japan: The statistical perspective}, series = {Bulletin of the Seismological Society of America}, volume = {104}, journal = {Bulletin of the Seismological Society of America}, number = {2}, publisher = {Seismological Society of America}, address = {Albany}, issn = {0037-1106}, doi = {10.1785/0120130103}, pages = {769 -- 779}, year = {2014}, abstract = {Earthquake catalogs are probably the most informative data source about spatiotemporal seismicity evolution. The catalog quality in one of the most active seismogenic zones in the world, Japan, is excellent, although changes in quality arising, for example, from an evolving network are clearly present. Here, we seek the best estimate for the largest expected earthquake in a given future time interval from a combination of historic and instrumental earthquake catalogs. We extend the technique introduced by Zoller et al. (2013) to estimate the maximum magnitude in a time window of length T-f for earthquake catalogs with varying level of completeness. In particular, we consider the case in which two types of catalogs are available: a historic catalog and an instrumental catalog. This leads to competing interests with respect to the estimation of the two parameters from the Gutenberg-Richter law, the b-value and the event rate lambda above a given lower-magnitude threshold (the a-value). The b-value is estimated most precisely from the frequently occurring small earthquakes; however, the tendency of small events to cluster in aftershocks, swarms, etc. violates the assumption of a Poisson process that is used for the estimation of lambda. We suggest addressing conflict by estimating b solely from instrumental seismicity and using large magnitude events from historic catalogs for the earthquake rate estimation. Applying the method to Japan, there is a probability of about 20\% that the maximum expected magnitude during any future time interval of length T-f = 30 years is m >= 9.0. Studies of different subregions in Japan indicates high probabilities for M 8 earthquakes along the Tohoku arc and relatively low probabilities in the Tokai, Tonankai, and Nankai region. Finally, for scenarios related to long-time horizons and high-confidence levels, the maximum expected magnitude will be around 10.}, language = {en} } @article{ZoellerHolschneider2014, author = {Z{\"o}ller, Gert and Holschneider, Matthias}, title = {Induced seismicity: What is the size of the largest expected earthquake?}, series = {The bulletin of the Seismological Society of America}, volume = {104}, journal = {The bulletin of the Seismological Society of America}, number = {6}, publisher = {Seismological Society of America}, address = {Albany}, issn = {0037-1106}, doi = {10.1785/0120140195}, pages = {3153 -- 3158}, year = {2014}, abstract = {The injection of fluids is a well-known origin for the triggering of earthquake sequences. The growing number of projects related to enhanced geothermal systems, fracking, and others has led to the question, which maximum earthquake magnitude can be expected as a consequence of fluid injection? This question is addressed from the perspective of statistical analysis. Using basic empirical laws of earthquake statistics, we estimate the magnitude M-T of the maximum expected earthquake in a predefined future time window T-f. A case study of the fluid injection site at Paradox Valley, Colorado, demonstrates that the magnitude m 4.3 of the largest observed earthquake on 27 May 2000 lies very well within the expectation from past seismicity without adjusting any parameters. Vice versa, for a given maximum tolerable earthquake at an injection site, we can constrain the corresponding amount of injected fluids that must not be exceeded within predefined confidence bounds.}, language = {en} } @article{ZoellerBenZion2014, author = {Z{\"o}ller, Gert and Ben-Zion, Yehuda}, title = {Large earthquake hazard of the San Jacinto fault zone, CA, from long record of simulated seismicity assimilating the available instrumental and paleoseismic data}, series = {Pure and applied geophysics}, volume = {171}, journal = {Pure and applied geophysics}, number = {11}, publisher = {Springer}, address = {Basel}, issn = {0033-4553}, doi = {10.1007/s00024-014-0783-1}, pages = {2955 -- 2965}, year = {2014}, abstract = {We investigate spatio-temporal properties of earthquake patterns in the San Jacinto fault zone (SJFZ), California, between Cajon Pass and the Superstition Hill Fault, using a long record of simulated seismicity constrained by available seismological and geological data. The model provides an effective realization of a large segmented strike-slip fault zone in a 3D elastic half-space, with heterogeneous distribution of static friction chosen to represent several clear step-overs at the surface. The simulated synthetic catalog reproduces well the basic statistical features of the instrumental seismicity recorded at the SJFZ area since 1981. The model also produces events larger than those included in the short instrumental record, consistent with paleo-earthquakes documented at sites along the SJFZ for the last 1,400 years. The general agreement between the synthetic and observed data allows us to address with the long-simulated seismicity questions related to large earthquakes and expected seismic hazard. The interaction between m a parts per thousand yen 7 events on different sections of the SJFZ is found to be close to random. The hazard associated with m a parts per thousand yen 7 events on the SJFZ increases significantly if the long record of simulated seismicity is taken into account. The model simulations indicate that the recent increased number of observed intermediate SJFZ earthquakes is a robust statistical feature heralding the occurrence of m a parts per thousand yen 7 earthquakes. The hypocenters of the m a parts per thousand yen 5 events in the simulation results move progressively towards the hypocenter of the upcoming m a parts per thousand yen 7 earthquake.}, language = {en} } @article{ZulawskiSchulzeBraginetsetal.2014, author = {Zulawski, Monika and Schulze, Gunnar and Braginets, Rostyslav and Hartmann, Stefanie and Schulze, Waltraud X.}, title = {The Arabidopsis Kinome: phylogeny and evolutionary insights into functional diversification}, series = {BMC genomics}, volume = {15}, journal = {BMC genomics}, publisher = {BioMed Central}, address = {London}, issn = {1471-2164}, doi = {10.1186/1471-2164-15-548}, pages = {14}, year = {2014}, abstract = {Background: Protein kinases constitute a particularly large protein family in Arabidopsis with important functions in cellular signal transduction networks. At the same time Arabidopsis is a model plant with high frequencies of gene duplications. Here, we have conducted a systematic analysis of the Arabidopsis kinase complement, the kinome, with particular focus on gene duplication events. We matched Arabidopsis proteins to a Hidden-Markov Model of eukaryotic kinases and computed a phylogeny of 942 Arabidopsis protein kinase domains and mapped their origin by gene duplication. Results: The phylogeny showed two major clades of receptor kinases and soluble kinases, each of which was divided into functional subclades. Based on this phylogeny, association of yet uncharacterized kinases to families was possible which extended functional annotation of unknowns. Classification of gene duplications within these protein kinases revealed that representatives of cytosolic subfamilies showed a tendency to maintain segmentally duplicated genes, while some subfamilies of the receptor kinases were enriched for tandem duplicates. Although functional diversification is observed throughout most subfamilies, some instances of functional conservation among genes transposed from the same ancestor were observed. In general, a significant enrichment of essential genes was found among genes encoding for protein kinases. Conclusions: The inferred phylogeny allowed classification and annotation of yet uncharacterized kinases. The prediction and analysis of syntenic blocks and duplication events within gene families of interest can be used to link functional biology to insights from an evolutionary viewpoint. The approach undertaken here can be applied to any gene family in any organism with an annotated genome.}, language = {en} } @misc{ZouharSauer2014, author = {Zouhar, Jan and Sauer, Michael}, title = {Helping hands for budding prospects: ENTH/ANTH/VHS accessory proteins in endocytosis, vacuolar transport, and secretion}, series = {The plant cell}, volume = {26}, journal = {The plant cell}, number = {11}, publisher = {American Society of Plant Physiologists}, address = {Rockville}, issn = {1040-4651}, doi = {10.1105/tpc.114.131680}, pages = {4232 -- 4244}, year = {2014}, abstract = {Coated vesicles provide a major mechanism for the transport of proteins through the endomembrane system of plants. Transport between the endoplasmic reticulum and the Golgi involves vesicles with COPI and COPII coats, whereas clathrin is the predominant coat in endocytosis and post-Golgi trafficking. Sorting of cargo, coat assembly, budding, and fission are all complex and tightly regulated processes that involve many proteins. The mechanisms and responsible factors are largely conserved in eukaryotes, and increasing organismal complexity tends to be associated with a greater numbers of individual family members. Among the key factors is the class of ENTH/ANTH/VHS domain-containing proteins, which link membrane subdomains, clathrin, and other adapter proteins involved in early steps of clathrin coated vesicle formation. More than 30 Arabidopsis thaliana proteins contain this domain, but their generally low sequence conservation has made functional classification difficult. Reports from the last two years have greatly expanded our knowledge of these proteins and suggest that ENTH/ANTH/VHS domain proteins are involved in various instances of clathrin-related endomembrane trafficking in plants. This review aims to summarize these new findings and discuss the broader context of clathrin-dependent plant vesicular transport.}, language = {en} } @article{ZorHeiskanenCavigliaetal.2014, author = {Zor, K. and Heiskanen, A. and Caviglia, Claudia and Vergani, M. and Landini, E. and Shah, F. and Carminati, Marco and Martinez-Serrano, A. and Ramos Moreno, T. and Kokaia, M. and Benayahu, Dafna and Keresztes, Zs. and Papkovsky, D. and Wollenberger, Ursula and Svendsen, W. E. and Dimaki, M. and Ferrari, G. and Raiteri, R. and Sampietro, M. and Dufva, M. and Emneus, Jenny}, title = {A compact multifunctional microfluidic platform for exploring cellular dynamics in real-time using electrochemical detection}, series = {RSC Advances}, volume = {4}, journal = {RSC Advances}, number = {109}, publisher = {Royal Society of Chemistry}, address = {Cambridge}, issn = {2046-2069}, doi = {10.1039/c4ra12632g}, pages = {63761 -- 63771}, year = {2014}, abstract = {Downscaling of microfluidic cell culture and detection devices for electrochemical monitoring has mostly focused on miniaturization of the microfluidic chips which are often designed for specific applications and therefore lack functional flexibility. We present a compact microfluidic cell culture and electrochemical analysis platform with in-built fluid handling and detection, enabling complete cell based assays comprising on-line electrode cleaning, sterilization, surface functionalization, cell seeding, cultivation and electrochemical real-time monitoring of cellular dynamics. To demonstrate the versatility and multifunctionality of the platform, we explored amperometric monitoring of intracellular redox activity in yeast (Saccharomyces cerevisiae) and detection of exocytotically released dopamine from rat pheochromocytoma cells (PC12). Electrochemical impedance spectroscopy was used in both applications for monitoring cell sedimentation and adhesion as well as proliferation in the case of PC12 cells. The influence of flow rate on the signal amplitude in the detection of redox metabolism as well as the effect of mechanical stimulation on dopamine release were demonstrated using the programmable fluid handling capability. The here presented platform is aimed at applications utilizing cell based assays, ranging from e.g. monitoring of drug effects in pharmacological studies, characterization of neural stem cell differentiation, and screening of genetically modified microorganisms to environmental monitoring.}, language = {en} } @article{ZohselBuchmannBlomeyeretal.2014, author = {Zohsel, Katrin and Buchmann, Arlette F. and Blomeyer, Dorothea and Hohm, Erika and Schmidt, Martin H. and Esser, G{\"u}nter and Brandeis, Daniel and Banaschewski, Tobias and Laucht, Manfred}, title = {Mothers' prenatal stress and their children's antisocial outcomes - a moderating role for the dopamine receptor D4 (DRD4) gene}, series = {The journal of child psychology and psychiatry}, volume = {55}, journal = {The journal of child psychology and psychiatry}, number = {1}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0021-9630}, doi = {10.1111/jcpp.12138}, pages = {69 -- 76}, year = {2014}, abstract = {ResultsUnder conditions of elevated prenatal maternal stress, children carrying one or two DRD4 7r alleles were at increased risk of a diagnosis of CD/ODD. Moreover, homozygous carriers of the DRD4 7r allele displayed more externalizing behavior following exposure to higher levels of prenatal maternal stress, while homozygous carriers of the DRD4 4r allele turned out to be insensitive to the effects of prenatal stress. ConclusionsThis study is the first to report a gene-environment interaction related to DRD4 and prenatal maternal stress using data from a prospective study, which extends earlier findings on the impact of prenatal maternal stress with respect to childhood antisocial behavior.}, language = {en} } @article{ZobirAltenbergerGuenter2014, author = {Zobir, Soraya Hadj and Altenberger, Uwe and G{\"u}nter, Christina}, title = {Geochemistry and petrology of metamorphosed submarine basic ashes in the Edough Massif (Cap de Garde, Annaba, northeastern Algeria)}, series = {Comptes rendus geoscience}, volume = {346}, journal = {Comptes rendus geoscience}, number = {9-10}, publisher = {Elsevier}, address = {Paris}, issn = {1631-0713}, doi = {10.1016/j.crte.2014.09.002}, pages = {244 -- 254}, year = {2014}, abstract = {The study presents the first evidence of metamorphosed submarine ashes in the Edough Massif, in northeastern Algeria. It occurs below the greenschist-facies Tellian units that represent the thrusted Mesozoic to Eocene passive paleomargin of northern Africa deposited on thinned continental crust. The metamorphic complex consists of tectonically superposed units composed of gneisses (lower unit) and micaschists (upper unit). At the Cap de Garde, these units enclose an "intermediate unit" composed of micaschists and meter-thick layers of marbles, which are sometimes intercalated with amphibolites. The latter occur as discontinuous small lenses and layers. The amphibolites are parallel to the primary bedding of the marbles and the main foliation. Chemical markers and field observations indicate that they are metamorphic equivalents of basic igneous rocks. The lenticular character, low thickness and multiple intercalations with marine sediments and the unusual high lithium concentrations suggest subaqueous near-source basaltic ash-fall deposits in a marine environment. (C) 2014 Academie des sciences. Published by Elsevier Masson SAS. All rights reserved.}, language = {en} } @article{ZinkWernerJechowetal.2014, author = {Zink, Christof and Werner, Nils and Jechow, Andreas and Heuer, Axel and Menzel, Ralf}, title = {Multi-wavelength operation of a single broad area diode laser by spectral beam combining}, series = {IEEE photonics technology letters}, volume = {26}, journal = {IEEE photonics technology letters}, number = {3}, publisher = {Inst. of Electr. and Electronics Engineers}, address = {Piscataway}, issn = {1041-1135}, doi = {10.1109/LPT.2013.2291963}, pages = {253 -- 256}, year = {2014}, abstract = {Stabilized multi-wavelength emission from a single emitter broad area diode laser (BAL) is realized by utilizing an external cavity with a spectral beam combining architecture. Self-organized emitters that are equidistantly spaced across the slow axis are enforced by the spatially distributed wavelength selectivity of the external cavity. This resulted in an array like near-field emission although the BAL is physically a single emitter without any epitaxial sub-structuring and only one electrical contact. Each of the self-organized emitters is operated at a different wavelength and the emission is multiplexed into one spatial mode with near-diffraction limited beam quality. With this setup, multi-line emission of 31 individual spectral lines centered around and a total spectral width of 3.6 nm is realized with a 1000 mu m wide BAL just above threshold. To the best of our knowledge, this is the first demonstration of such a self-organization of emitters by optical feedback utilizing a spectral beam combining architecture.}, language = {en} } @article{ZinkNiebuhrJechowetal.2014, author = {Zink, Christof and Niebuhr, Mario and Jechow, Andreas and Heuer, Axel and Menzel, Ralf}, title = {Broad area diode laser with on-chip transverse Bragg grating stabilized in an off-axis external cavity}, series = {Optics express : the international electronic journal of optics}, volume = {22}, journal = {Optics express : the international electronic journal of optics}, number = {12}, publisher = {Optical Society of America}, address = {Washington}, issn = {1094-4087}, doi = {10.1364/OE.22.014108}, pages = {14108 -- 14113}, year = {2014}, abstract = {The emission characteristics of a novel, specially designed broad area diode laser (BAL) with on-chip transversal Bragg resonance (TBR) grating in lateral direction were investigated in an off-axis external cavity setup. The internal TBR grating defines a low loss transversal mode at a specific angle of incidence and a certain wavelength. By providing feedback at this specific angle with an external mirror, it is possible to select this low loss transverse mode and stabilize the BAL. Near diffraction limited emission with an almost single lobed far field pattern could be realized, in contrast to the double lobed far field pattern of similar setups using standard BALs or phase-locked diode laser arrays. Furthermore, we could achieve a narrow bandwidth emission with a simplified setup without external frequency selective elements. (C) 2014 Optical Society of America}, language = {en} }