@article{BoettleRybskiKropp2013, author = {B{\"o}ttle, Markus and Rybski, Diego and Kropp, J{\"u}rgen}, title = {How changing sea level extremes and protection measures alter coastal flood damages}, series = {Water resources research}, volume = {49}, journal = {Water resources research}, number = {3}, publisher = {American Geophysical Union}, address = {Washington}, issn = {0043-1397}, doi = {10.1002/wrcr.20108}, pages = {1199 -- 1210}, year = {2013}, abstract = {While sea level rise is one of the most likely consequences of climate change, the provoked costs remain highly uncertain. Based on a block-maxima approach, we provide a stochastic framework to estimate the increase of expected damages with sea level rise as well as with meteorological changes and demonstrate the application to two case studies. In addition, the uncertainty of the damage estimations due to the stochastic nature of extreme events is studied. Starting with the probability distribution of extreme flood levels, we calculate the distribution of implied damages in a specific region employing stage-damage functions. Universal relations of the expected damages and their standard deviation, which demonstrate the importance of the shape of the damage function, are provided. We also calculate how flood protection reduces the damages leading to a more complex picture, where the extreme value behavior plays a fundamental role. Citation: Boettle, M., D. Rybski, and J. P. Kropp (2013), How changing sea level extremes and protection measures alter coastal flood damages, Water Resour. Res., 49, 1199-1210, doi: 10.1002/wrcr.20108.}, language = {en} } @article{BurgemeisterGvaramadzeStringfellowetal.2013, author = {Burgemeister, S. and Gvaramadze, Visily V. and Stringfellow, G. S. and Kniazev, Alexei Y. and Todt, Helge Tobias and Hamann, Wolf-Rainer}, title = {WR 120bb and WR 120bc: a pair of WN9h stars with possibly interacting circumstellar shells}, series = {Monthly notices of the Royal Astronomical Society}, volume = {429}, journal = {Monthly notices of the Royal Astronomical Society}, number = {4}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {0035-8711}, doi = {10.1093/mnras/sts588}, pages = {3305 -- 3315}, year = {2013}, abstract = {Two optically obscured Wolf-Rayet (WR) stars have been recently discovered by means of their infrared (IR) circumstellar shells, which show signatures of interaction with each other. Following the systematics of the WR star catalogues, these stars obtain the names WR 120bb and WR 120bc. In this paper, we present and analyse new near-IR, J-, H- and K-band spectra using the Potsdam Wolf-Rayet model atmosphere code. For that purpose, the atomic data base of the code has been extended in order to include all significant lines in the near-IR bands. The spectra of both stars are classified as WN9h. As their spectra are very similar the parameters that we obtained by the spectral analyses hardly differ. Despite their late spectral subtype, we found relatively high stellar temperatures of 63 kK. The wind composition is dominated by helium, while hydrogen is depleted to 25 per cent by mass. Because of their location in the Scutum-Centaurus Arm, WR 120bb and WR 120bc appear highly reddened, A(Ks) approximate to 2 mag. We adopt a common distance of 5.8 kpc to both stars, which complies with the typical absolute K-band magnitude for the WN9h subtype of -6.5 mag, is consistent with their observed extinction based on comparison with other massive stars in the region, and allows for the possibility that their shells are interacting with each other. This leads to luminosities of log(L/L-circle dot) = 5.66 and 5.54 for WR 120bb and WR 120bc, with large uncertainties due to the adopted distance. The values of the luminosities of WR 120bb and WR 120bc imply that the immediate precursors of both stars were red supergiants (RSG). This implies in turn that the circumstellar shells associated with WR 120bb and WR 120bc were formed by interaction between the WR wind and the dense material shed during the preceding RSG phase.}, language = {en} } @article{NeumannSchaalMesserschmidtGrenzetal.2013, author = {Neumann-Schaal, Meina and Messerschmidt, Katrin and Grenz, Nicole and Heilmann, Katja}, title = {Use of antibody gene library for the isolation of specific single chain antibodies. by ampicillin-antigen conjugates}, series = {Immunology letters : an international journal providing for the rapid publication of short reports in immunology}, volume = {151}, journal = {Immunology letters : an international journal providing for the rapid publication of short reports in immunology}, number = {1-2}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0165-2478}, doi = {10.1016/j.imlet.2013.02.005}, pages = {39 -- 43}, year = {2013}, abstract = {Isolation of recombinant antibodies from antibody libraries is commonly performed by different molecular display formats including phage display and ribosome display or different cell-surface display formats. We describe a new method which allows the selection of Escherichia coil cells producing the required single chain antibody by cultivation in presence of ampicillin conjugated to the antigen of interest. The method utilizes the neutralization of the conjugate by the produced single chain antibody which is secreted to the periplasm. Therefore, a new expression system based on the pET26b vector was designed and a library was constructed. The method was successfully established first for the selection of E. coli BL21 Star (DE3) cells expressing a model single chain antibody (anti-fluorescein) by a simple selection assay on LB-agar plates. Using this selection assay, we could identify a new single chain antibody binding biotin by growing E. coil BL21 Star (DE3) containing the library in presence of a biotin-ampicillin conjugate. In contrast to methods as molecular or cell surface display our selection system applies the soluble single chain antibody molecule and thereby avoids undesired effects, e.g. by the phage particle or the yeast fusion protein. By selecting directly in an expression strain, production and characterization of the selected single chain antibody is possible without any further cloning or transformation steps.}, language = {en} } @article{LuBlakesleyHimmelbergeretal.2013, author = {Lu, Guanghao and Blakesley, James C. and Himmelberger, Scott and Pingel, Patrick and Frisch, Johannes and Lieberwirth, Ingo and Salzmann, Ingo and Oehzelt, Martin and Di Pietro, Riccardo and Salleo, Alberto and Koch, Norbert and Neher, Dieter}, title = {Moderate doping leads to high performance of semiconductor/insulator polymer blend transistors}, series = {Nature Communications}, volume = {4}, journal = {Nature Communications}, number = {1-2}, publisher = {Nature Publ. Group}, address = {London}, issn = {2041-1723}, doi = {10.1038/ncomms2587}, pages = {8}, year = {2013}, abstract = {Polymer transistors are being intensively developed for next-generation flexible electronics. Blends comprising a small amount of semiconducting polymer mixed into an insulating polymer matrix have simultaneously shown superior performance and environmental stability in organic field-effect transistors compared with the neat semiconductor. Here we show that such blends actually perform very poorly in the undoped state, and that mobility and on/off ratio are improved dramatically upon moderate doping. Structural investigations show that these blend layers feature nanometre-scale semiconductor domains and a vertical composition gradient. This particular morphology enables a quasi three-dimensional spatial distribution of semiconductor pathways within the insulating matrix, in which charge accumulation and depletion via a gate bias is substantially different from neat semiconductor, and where high on-current and low off-current are simultaneously realized in the stable doped state. Adding only 5 wt\% of a semiconducting polymer to a polystyrene matrix, we realized an environmentally stable inverter with gain up to 60.}, language = {en} } @article{vanHoolandVerborghDeWildeetal.2013, author = {van Hooland, Seth and Verborgh, Ruben and De Wilde, Max and Hercher, Johannes and Mannens, Erik and Van de Walle, Rik}, title = {Evaluating the success of vocabulary reconciliation for cultural heritage collections}, series = {Journal of the American Society for Information Science and Technology}, volume = {64}, journal = {Journal of the American Society for Information Science and Technology}, number = {3}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {1532-2882}, doi = {10.1002/asi.22763}, pages = {464 -- 479}, year = {2013}, abstract = {The concept of Linked Data has made its entrance in the cultural heritage sector due to its potential use for the integration of heterogeneous collections and deriving additional value out of existing metadata. However, practitioners and researchers alike need a better understanding of what outcome they can reasonably expect of the reconciliation process between their local metadata and established controlled vocabularies which are already a part of the Linked Data cloud. This paper offers an in-depth analysis of how a locally developed vocabulary can be successfully reconciled with the Library of Congress Subject Headings (LCSH) and the Arts and Architecture Thesaurus (AAT) through the help of a general-purpose tool for interactive data transformation (OpenRefine). Issues negatively affecting the reconciliation process are identified and solutions are proposed in order to derive maximum value from existing metadata and controlled vocabularies in an automated manner.}, language = {en} } @article{MeckelmannPfeiferRauh2013, author = {Meckelmann, Viola and Pfeifer, Caroline and Rauh, Hellgard}, title = {Family relationships in childhood, pubertal timing, and subsequent reproductive strategies among adolescents}, series = {South African journal of psychology}, volume = {43}, journal = {South African journal of psychology}, number = {1}, publisher = {Sage Publ.}, address = {London}, issn = {0081-2463}, doi = {10.1177/0081246312474408}, pages = {22 -- 33}, year = {2013}, abstract = {The evolutionary theory of socialization of Belsky, Steinberg, and Draper was investigated on the empirical basis of a longitudinal sample of 26 adolescent girls and boys who were born in Berlin during German reunification, as well as their mothers. Consistent with the theory, pubertal timing of the girls (but not of the boys) was predicted by the quality of parental relations in childhood, and pubertal timing of the girls (but not of the boys) was a significant predictor of the age at first intercourse. The results suggest that there are different developmental pathways for girls and boys with respect to the predictions of the evolutionary theory of socialization of Belsky et al. The findings also support the hypothesis that early onset of reproduction and frequent reproduction may be two different aspects of a quantitative reproductive strategy.}, language = {en} } @article{WestendorfNegreteBaeetal.2013, author = {Westendorf, Christian and Negrete, Jose and Bae, Albert J. and Sandmann, Rabea and Bodenschatz, Eberhard and Beta, Carsten}, title = {Actin cytoskeleton of chemotactic amoebae operates close to the onset of oscillations}, series = {Proceedings of the National Academy of Sciences of the United States of America}, volume = {110}, journal = {Proceedings of the National Academy of Sciences of the United States of America}, number = {10}, publisher = {National Acad. of Sciences}, address = {Washington}, issn = {0027-8424}, doi = {10.1073/pnas.1216629110}, pages = {3853 -- 3858}, year = {2013}, abstract = {The rapid reorganization of the actin cytoskeleton in response to external stimuli is an essential property of many motile eukaryotic cells. Here, we report evidence that the actin machinery of chemotactic Dictyostelium cells operates close to an oscillatory instability. When averaging the actin response of many cells to a short pulse of the chemoattractant cAMP, we observed a transient accumulation of cortical actin reminiscent of a damped oscillation. At the single-cell level, however, the response dynamics ranged from short, strongly damped responses to slowly decaying, weakly damped oscillations. Furthermore, in a small subpopulation, we observed self-sustained oscillations in the cortical F-actin concentration. To substantiate that an oscillatory mechanism governs the actin dynamics in these cells, we systematically exposed a large number of cells to periodic pulse trains of different frequencies. Our results indicate a resonance peak at a stimulation period of around 20 s. We propose a delayed feedback model that explains our experimental findings based on a time-delay in the regulatory network of the actin system. To test the model, we performed stimulation experiments with cells that express GFP-tagged fusion proteins of Coronin and actin-interacting protein 1, as well as knockout mutants that lack Coronin and actin-interacting protein 1. These actin-binding proteins enhance the disassembly of actin filaments and thus allow us to estimate the delay time in the regulatory feedback loop. Based on this independent estimate, our model predicts an intrinsic period of 20 s, which agrees with the resonance observed in our periodic stimulation experiments.}, language = {en} } @article{HarmaPihlasaloCywinskietal.2013, author = {Harma, Harri and Pihlasalo, Sari and Cywinski, Piotr J. and Mikkonen, Piia and Hammann, Tommy and L{\"o}hmannsr{\"o}ben, Hans-Gerd and Hanninen, Pekka}, title = {Protein quantification using resonance energy transfer between donor nanoparticles and acceptor quantum dots}, series = {Analytical chemistry}, volume = {85}, journal = {Analytical chemistry}, number = {5}, publisher = {American Chemical Society}, address = {Washington}, issn = {0003-2700}, doi = {10.1021/ac303586n}, pages = {2921 -- 2926}, year = {2013}, abstract = {A homogeneous time-resolved luminescence resonance energy transfer (TR-LRET) assay has been developed to quantify proteins. The competitive assay is based on resonance energy transfer (RET) between two luminescent nanosized particles. Polystyrene nanoparticles loaded with Eu3+ chelates (EuNPs) act as donors, while protein-coated quantum dots (QDs), either CdSe/ZnS emitting at 655 nm (QD655-strep) or CdSeTe/ZnS with emission wavelength at 705 nm (QD705-strep), are acceptors. In the absence of analyte protein, in our case bovine serum albumin (BSA), the protein-coated QDs bind nonspecifically to the EuNPs, leading to RET. In the presence of analyte proteins, the binding of the QDs to the EuNPs is prevented and the RET signal decreases. RET from the EuNPs to the QDs was confirmed and characterized with steady-state and time-resolved luminescence spectroscopy. In accordance with the Forster theory, the approximate average donor acceptor distance is around 15 nm at RET efficiencies, equal to 15\% for QD655 and 13\% for QD705 acceptor, respectively. The limits of detection are below 10 ng of BSA with less than a 10\% average coefficient of variation. The assay sensitivity is improved, when compared to the most sensitive commercial methods. The presented mix-and-measure method has potential to be implemented into routine protein quantification in biological laboratories.}, language = {en} } @article{JulichGrunerLoewenbergNeffeetal.2013, author = {Julich-Gruner, Konstanze K. and L{\"o}wenberg, Candy and Neffe, Axel T. and Behl, Marc and Lendlein, Andreas}, title = {Recent trends in the chemistry of shape-memory polymers}, series = {Macromolecular chemistry and physics}, volume = {214}, journal = {Macromolecular chemistry and physics}, number = {5}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1022-1352}, doi = {10.1002/macp.201200607}, pages = {527 -- 536}, year = {2013}, abstract = {Shape-memory polymers (SMPs) are stimuli-sensitive materials capable of performing complex movements on demand, which makes them interesting candidates for various applications, for example, in biomedicine or aerospace. This trend article highlights current approaches in the chemistry of SMPs, such as tailored segment chemistry to integrate additional functions and novel synthetic routes toward permanent and temporary netpoints. Multiphase polymer networks and multimaterial systems illustrate that SMPs can be constructed as a modular system of different building blocks and netpoints. Future developments are aiming at multifunctional and multistimuli-sensitive SMPs.}, language = {en} } @article{BeyeFoehlisch2013, author = {Beye, Martin and F{\"o}hlisch, Alexander}, title = {Soft X-ray probes of ultrafast dynamics for heterogeneous catalysis}, series = {Chemical physics : a journal devoted to experimental and theoretical research involving problems of both a chemical and physical nature}, volume = {414}, journal = {Chemical physics : a journal devoted to experimental and theoretical research involving problems of both a chemical and physical nature}, number = {5}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0301-0104}, doi = {10.1016/j.chemphys.2012.03.023}, pages = {130 -- 138}, year = {2013}, abstract = {Soft X-ray spectroscopy is one of the best tools to directly address the electronic structure, the driving force of chemical reactions. It enables selective studies on sample surfaces to single out reaction centers in heterogeneous catalytic reactions. With core-hole clock methods, specific dynamics are related to the femtosecond life time of a core-hole. Typically, this method is used with photoemission spectroscopy, but advancements in soft X-ray emission techniques render more specific studies possible. With the advent of bright femtosecond pulsed soft X-ray sources, highly selective pump-probe X-ray emission studies are enabled with temporal resolutions down to tens of femtoseconds. This finally allows to study dynamics in the electronic structure of adsorbed reaction centers on the whole range of relevant time scales - closing the gap between kinetic soft X-ray studies and the atto- to femtosecond core-hole clock techniques.}, language = {en} }