TY  - JOUR
A1  - Wilhelmi, Ilka
A1  - Neumann, Alexander
A1  - Jähnert, Markus
A1  - Ouni, Meriem
A1  - Schürmann, Annette
T1  - Enriched alternative splicing in islets of diabetes-susceptible mice
T2  - International journal of molecular sciences
N2  - Dysfunctional islets of Langerhans are a hallmark of type 2 diabetes (T2D). We hypothesize that differences in islet gene expression alternative splicing which can contribute to altered protein function also participate in islet dysfunction. RNA sequencing (RNAseq) data from islets of obese diabetes-resistant and diabetes-susceptible mice were analyzed for alternative splicing and its putative genetic and epigenetic modulators. We focused on the expression levels of chromatin modifiers and SNPs in regulatory sequences. We identified alternative splicing events in islets of diabetes-susceptible mice amongst others in genes linked to insulin secretion, endocytosis or ubiquitin-mediated proteolysis pathways. The expression pattern of 54 histones and chromatin modifiers, which may modulate splicing, were markedly downregulated in islets of diabetic animals. Furthermore, diabetes-susceptible mice carry SNPs in RNA-binding protein motifs and in splice sites potentially responsible for alternative splicing events. They also exhibit a larger exon skipping rate, e.g., in the diabetes gene Abcc8, which might affect protein function. Expression of the neuronal splicing factor Srrm4 which mediates inclusion of microexons in mRNA transcripts was markedly lower in islets of diabetes-prone compared to diabetes-resistant mice, correlating with a preferential skipping of SRRM4 target exons. The repression of Srrm4 expression is presumably mediated via a higher expression of miR-326-3p and miR-3547-3p in islets of diabetic mice. Thus, our study suggests that an altered splicing pattern in islets of diabetes-susceptible mice may contribute to an elevated T2D risk.
KW  - alternative splicing
KW  - epigenetic
KW  - MicroRNA
KW  - RNAseq
KW  - diabetes
KW  - beta-cell
KW  - failure
Y1  - 2021
UR  - https://publishup.uni-potsdam.de/frontdoor/index/index/docId/64671
SN  - 1422-0067
VL  - 22
IS  - 16
PB  - Molecular Diversity Preservation International
CY  - Basel
ER  -